mRNA_F-distichus_contig10612.522.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10612.522.1 vs. uniprot
Match: D7G8D7_ECTSI (ARL1, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D7_ECTSI) HSP 1 Score: 238 bits (607), Expect = 1.380e-78 Identity = 114/119 (95.80%), Postives = 119/119 (100.00%), Query Frame = 1
Query: 1 KVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLEEEELKDAILLVFANKQDQPGSLTATEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGEA 357
+VWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERM+IAKQEL+AMLEEEELKDAILLVFANKQDQPGSLT+TEVSEALGLPDIR+RQWSIQEASALKGKGLFEGFDWLVTCIKGGEA
Sbjct: 66 QVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMAIAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDIRNRQWSIQEASALKGKGLFEGFDWLVTCIKGGEA 184
BLAST of mRNA_F-distichus_contig10612.522.1 vs. uniprot
Match: A0A836CD21_9STRA (ARL1, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD21_9STRA) HSP 1 Score: 224 bits (570), Expect = 5.970e-73 Identity = 105/119 (88.24%), Postives = 114/119 (95.80%), Query Frame = 1
Query: 1 KVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLEEEELKDAILLVFANKQDQPGSLTATEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGEA 357
+VWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ER+ IAKQEL AMLEEEELKDAILLVFANKQDQPGSL AT+VSEALGLP++RSRQW+IQEASA+KGKGLFEGFDWLVTCIKGG A
Sbjct: 66 QVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADTERLGIAKQELAAMLEEEELKDAILLVFANKQDQPGSLKATQVSEALGLPELRSRQWTIQEASAVKGKGLFEGFDWLVTCIKGGNA 184
BLAST of mRNA_F-distichus_contig10612.522.1 vs. uniprot
Match: A0A1E7FFD0_9STRA (Arl1-family small GTPase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFD0_9STRA) HSP 1 Score: 209 bits (531), Expect = 5.170e-67 Identity = 96/116 (82.76%), Postives = 108/116 (93.10%), Query Frame = 1
Query: 1 KVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLEEEELKDAILLVFANKQDQPGSLTATEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKG 348
+VWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ERM +AK EL AMLEE+ELKD+ILLVFANKQDQ G++ A ++S+ALGLPDIR+RQWSIQE SALKGKGLFEGFDWLVTCIKG
Sbjct: 66 QVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADAERMPVAKGELAAMLEEDELKDSILLVFANKQDQKGAMNAQQISDALGLPDIRNRQWSIQETSALKGKGLFEGFDWLVTCIKG 181
BLAST of mRNA_F-distichus_contig10612.522.1 vs. uniprot
Match: A0A7S2DEW5_9STRA (Hypothetical protein n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2DEW5_9STRA) HSP 1 Score: 208 bits (530), Expect = 7.340e-67 Identity = 98/118 (83.05%), Postives = 109/118 (92.37%), Query Frame = 1
Query: 1 KVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLEEEELKDAILLVFANKQDQPGSLTATEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGE 354
+VWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+DRER+++A+QEL AMLEEEELKD+ILLVFANKQDQ G+L A VSEAL LPDIR+RQWSIQE ALKGKGLFEGFDWLV CIKGG+
Sbjct: 66 QVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADRERLNVAQQELQAMLEEEELKDSILLVFANKQDQSGALGAQGVSEALRLPDIRNRQWSIQETCALKGKGLFEGFDWLVMCIKGGD 183
BLAST of mRNA_F-distichus_contig10612.522.1 vs. uniprot
Match: F0YGB1_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YGB1_AURAN) HSP 1 Score: 204 bits (520), Expect = 2.370e-65 Identity = 95/116 (81.90%), Postives = 107/116 (92.24%), Query Frame = 1
Query: 1 KVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLEEEELKDAILLVFANKQDQPGSLTATEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKG 348
+VWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D+ER+++A+QEL AMLEEEELKDAILLV ANKQDQ G+L A +VSEALGLPD+R+RQWSIQE A KGKGL EGFDWLVTCIKG
Sbjct: 67 QVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADKERLAVARQELQAMLEEEELKDAILLVLANKQDQRGALGAKDVSEALGLPDVRNRQWSIQETCATKGKGLSEGFDWLVTCIKG 182
BLAST of mRNA_F-distichus_contig10612.522.1 vs. uniprot
Match: B8CE86_THAPS (Adp-ribosylation factor 1 n=15 Tax=Bacillariophyta TaxID=2836 RepID=B8CE86_THAPS) HSP 1 Score: 204 bits (519), Expect = 3.580e-65 Identity = 95/118 (80.51%), Postives = 109/118 (92.37%), Query Frame = 1
Query: 1 KVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLEEEELKDAILLVFANKQDQPGSLTATEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGE 354
+VWDLGGQTSIRPYWRCYYPNTDAIVFVVDS+D ERMS+AK EL AMLEEEEL+++ILLVFANKQDQ G+L A ++S+ALGLP++R+RQWSIQE SAL+GKGLFEGFDWLV CIKG E
Sbjct: 66 QVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSADVERMSVAKGELAAMLEEEELQNSILLVFANKQDQKGALNAQQISDALGLPEVRNRQWSIQETSALQGKGLFEGFDWLVACIKGVE 183
BLAST of mRNA_F-distichus_contig10612.522.1 vs. uniprot
Match: A0A7S3PDY2_9STRA (Hypothetical protein n=3 Tax=Labyrinthulomycetes TaxID=35131 RepID=A0A7S3PDY2_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.360e-64 Identity = 94/119 (78.99%), Postives = 108/119 (90.76%), Query Frame = 1
Query: 1 KVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLEEEELKDAILLVFANKQDQPGSLTATEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGEA 357
+VWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ER++IAKQEL+AMLEEEELKD+ILLVFANKQD G+L A +VSE LGL I++RQWSIQE SA KG+GLFEGFDWLVTCIK G++
Sbjct: 65 QVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADVERLNIAKQELMAMLEEEELKDSILLVFANKQDMKGALNAAQVSEHLGLATIKNRQWSIQETSATKGRGLFEGFDWLVTCIKSGQS 183
BLAST of mRNA_F-distichus_contig10612.522.1 vs. uniprot
Match: A0A7S3DQ25_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DQ25_9STRA) HSP 1 Score: 204 bits (519), Expect = 1.930e-64 Identity = 94/118 (79.66%), Postives = 109/118 (92.37%), Query Frame = 1
Query: 1 KVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLEEEELKDAILLVFANKQDQPGSLTATEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGE 354
+VWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ERMS+A+ EL AMLEEE+LKD+ILLVFANKQDQ G+L A ++S+ALGLP++R+RQWSIQE SALKGKG+FEGFDWLVT IKG E
Sbjct: 119 QVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADIERMSVARGELTAMLEEEDLKDSILLVFANKQDQKGALNAEQISDALGLPEVRNRQWSIQETSALKGKGMFEGFDWLVTSIKGEE 236
BLAST of mRNA_F-distichus_contig10612.522.1 vs. uniprot
Match: A0A6U1B3M7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1B3M7_9STRA) HSP 1 Score: 202 bits (515), Expect = 3.800e-64 Identity = 94/119 (78.99%), Postives = 108/119 (90.76%), Query Frame = 1
Query: 1 KVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLEEEELKDAILLVFANKQDQPGSLTATEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGEA 357
+VWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D+ER+++A+QEL AMLEEEELKDAILL+FANKQDQ G+L A ++SEAL L +IR+RQWSIQE ALKG GLFEGFDWLV CI GGEA
Sbjct: 97 QVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADKERLNVAQQELQAMLEEEELKDAILLLFANKQDQKGALGAQDISEALKLTEIRNRQWSIQETCALKGNGLFEGFDWLVMCISGGEA 215
BLAST of mRNA_F-distichus_contig10612.522.1 vs. uniprot
Match: A0A6S9DTD2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DTD2_HETAK) HSP 1 Score: 201 bits (512), Expect = 3.900e-64 Identity = 92/116 (79.31%), Postives = 107/116 (92.24%), Query Frame = 1
Query: 1 KVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLEEEELKDAILLVFANKQDQPGSLTATEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKG 348
+VWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ER+ +A+QEL AMLEEE+L+DAILLVFANKQDQ G+L A ++SE+LGL +IR+RQWSIQE SALKG GL+EGFDWLVTCIKG
Sbjct: 66 QVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADAERVHVARQELSAMLEEEDLRDAILLVFANKQDQRGALNAAQISESLGLSEIRNRQWSIQETSALKGNGLYEGFDWLVTCIKG 181 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10612.522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10612.522.1 >prot_F-distichus_contig10612.522.1 ID=prot_F-distichus_contig10612.522.1|Name=mRNA_F-distichus_contig10612.522.1|organism=Fucus distichus monoicous|type=polypeptide|length=120bp KVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLEEback to top mRNA from alignment at F-distichus_contig10612:5944..10809- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10612.522.1 ID=mRNA_F-distichus_contig10612.522.1|Name=mRNA_F-distichus_contig10612.522.1|organism=Fucus distichus monoicous|type=mRNA|length=4866bp|location=Sequence derived from alignment at F-distichus_contig10612:5944..10809- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10612:5944..10809- >mRNA_F-distichus_contig10612.522.1 ID=mRNA_F-distichus_contig10612.522.1|Name=mRNA_F-distichus_contig10612.522.1|organism=Fucus distichus monoicous|type=CDS|length=720bp|location=Sequence derived from alignment at F-distichus_contig10612:5944..10809- (Fucus distichus monoicous)back to top |