mRNA_F-distichus_contig10579.486.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10579.486.1 vs. uniprot
Match: D7G5D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D6_ECTSI) HSP 1 Score: 174 bits (442), Expect = 2.880e-43 Identity = 115/312 (36.86%), Postives = 167/312 (53.53%), Query Frame = 3
Query: 1248 ETYGECPYDTVSSDGAPPCTECPLGDVTVSSGATECVLGALAYLDLPQSVADAIVTDAVGGFAGPGWVEFDDRVWRHVLLEEDANVLSLAGTFERWDDIDPTIPASTAVFAYLYKEDDPDAFLSSQGTIIPSTGSFTVILEDVPAGESILVLSFAILDSADAPPDMGTNTVFDYEVANVGCGNALTLTLEWDLRTYLVEWSDSSTYSTSEMDLWITEPTGAEMPWDE--STIGFHSGYSTY---PIVYTVYGDNPDAVGTYKIEVYESWVPHGT------VWTLTAEVRGEVLWVETGVREGFLPTTSSGSY 2150
E G C ++ SS GAPPCT CP G+V+ +GAT C+ L L LP+++A A+ DA+GGFAGPG + L EED +SL+GTF R D +P+ST+VF Y PD F+ Q + PSTG+F+ ++ D+PAG S L+LSF ++D A+A G +T F +V+N C +LT+TLEW T S++DL++ EP G + + +GF TY P Y + D + + YE++V + W LTA V GEV+W+E G F+ +T S ++
Sbjct: 135 EVAGLCASNSFSSTGAPPCTTCPDGEVS-GTGATACIRQELVGLSLPENIAAAMAADAMGGFAGPGSLT-TTPAGTIQLTEEDGGSVSLSGTFVRDDGA--ALPSSTSVFIYTENTAQPDDFVRGQEALDPSTGAFSTVVTDIPAGSSRLLLSFVVVDPAEALDTAGADTAFALDVSNSACVPSLTITLEW-------------TGEISDVDLYVVEPGGEVVYFSNRGGDVGFLDNDDTYGFGPENYII-DSALDPAASQVLGEYETYVKLYSGDAATETWRLTARVSGEVVWIEEG---DFISSTQSDTF 425
BLAST of mRNA_F-distichus_contig10579.486.1 vs. uniprot
Match: D7G3X5_ECTSI (VWFD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X5_ECTSI) HSP 1 Score: 172 bits (437), Expect = 1.410e-41 Identity = 113/301 (37.54%), Postives = 163/301 (54.15%), Query Frame = 3
Query: 1281 SSDGAPPCTECPLGDVTVSSGATECVLGALAYLDLPQSVADAIVTDAVGGFAGPGWVEFDDRVWRHVLLEEDANVLSLAGTFERWDDIDPTIPASTAVFAYLYKEDDPDAFLSSQGTIIPSTGSFTVILEDVPAGESILVLSFAILDSADAPPDMGTNTVFDYEVANVGCGNALTLTLEWDLRTYLVEWSDSSTYSTSEMDLWITEPTGAEMPWDE--STIGFHSGYSTY---PIVYTVYGDNPDAVGTYKIEVYESWVPHGT------VWTLTAEVRGEVLWVETGVREGFLPTTSSGSY 2150
SS GAPPCT CP G+V+ +GAT C+ L L LP+++A A+ DA+GGFAGPG + L EED +SL+GTF R D +P+ST+VF Y PD F+ Q + PSTG+F+ ++ D+PAG S L+LSF ++D A+A G +T F +V+N C +LT+TLEW T TS++DL++ EP G + + +GF TY P Y + D + + YE++V + W LTA V GEV+W+E G F+ +T S ++
Sbjct: 272 SSTGAPPCTTCPDGEVS-GTGATACIRQELVGLSLPENIAAAMAADAMGGFAGPGSLT-TTPAGTIQLTEEDGGSVSLSGTFVRDDGA--ALPSSTSVFIYTENTAQPDDFVRGQEALDPSTGAFSTVVTDIPAGSSRLLLSFVVVDPAEALDTAGADTAFALDVSNSACVPSLTITLEW-------------TGETSDVDLYVVEPGGEVVYFSNRGGDVGFLDNDDTYGFGPENYII-DSALDPAASQVLGEYETYVKLYSGDAATETWRLTARVSGEVVWIEEG---DFISSTQSDTF 551
BLAST of mRNA_F-distichus_contig10579.486.1 vs. uniprot
Match: A0A6H5JLL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL4_9PHAE) HSP 1 Score: 120 bits (302), Expect = 8.410e-24 Identity = 93/305 (30.49%), Postives = 148/305 (48.52%), Query Frame = 3
Query: 1257 GECPYDTVSSDGAPPCTECPLGDVTVSSGATECVLGALAYLDLP-QSVADAIVTDAVGGFAGPGWV------------EFDDRVWRHVLLEEDANVLSL--AGTFERWDDIDPTIPASTAVFAYLYKEDDPDAFLSSQGTIIPSTGSFTVILEDVPAGESILVLSFAILDSADA----PPDMGTNTVFDYEVANVGCGNALTLTLEW---DLRTYLVEWSDSSTYSTSEMDLWITEPTGAEMPWDESTIGFHSGYSTYPIVYTVYGDNPDAVGTYKIEVYESWVPHGT--VWTLTAEVRGEVLWV 2099
G C +T SS G PPCT+CP G+V+ GA CV + + LP +++ A++ DA GGFAGPG + E D + W + L DAN+ S+ +G F R D +P S+AVF Y+ D PD I ++G F++++ DVP G S L LSF I D A+A + ++F +++N+ C +LT+T EW + Y + D +T + + +G + ++ G Y + + D +G YK + +P T W +TA V GE++++
Sbjct: 760 GLCTTNTFSSTGTPPCTDCPAGEVS-GRGAKVCVPQGVPAVALPSEAIVAAMLADATGGFAGPGSLIDGGVMGGFGVTEVDIQPWGEIELT-DANLGSVYVSGKFVRHDSA--PLPFSSAVFFYIENADQPDDIARGSSKIRGTSGDFSMVVMDVPPGNSRLFLSFVIKDPAEALNVAAEVVPATSIFSLQISNMACVPSLTITHEWIGGNFAPYEITEPDLTTIHSGHGNY-----SGGVGVFQDNWAGSSPAAKRYILYSGLDVDTSQVLGEYKGRKFLPILPSETPPTWRITARVSGEIVYM 1055
BLAST of mRNA_F-distichus_contig10579.486.1 vs. uniprot
Match: D8LKE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKE7_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 1.820e-15 Identity = 73/250 (29.20%), Postives = 118/250 (47.20%), Query Frame = 3
Query: 1419 AVGGFAGPGWV------------EFDDRVWRHVLLEEDANVLSL--AGTFERWDDIDPTIPASTAVFAYLYKEDDPDAFLSSQGTIIPSTGSFTVILEDVPAGESILVLSFAILDSADA----PPDMGTNTVFDYEVANVGCGNALTLTLEW---DLRTYLVEWSDSSTYSTSEMDLWITEPTGAEMPWDESTIGFHSGYSTYPIVYTVYGDNPDAVGTYKIEVYESWVPHGT--VWTLTAEVRGEVLWV 2099
A GGFAGPG + E D + W + L DAN+ S+ +G F R D +P S+AVF Y+ D PD F I ++G ++++ DVP G S L LSF I D A+A + ++F +++N+GC +LT+T EW + Y + D +T ++ D+ +G + ++ G Y + + D +G YK ++ +V T W TA V GE++++
Sbjct: 10 ATGGFAGPGSLIDGGVMGGFGVTEVDIQPWGEIELT-DANLGSVYVSGKFVRHDSA--ALPFSSAVFFYIENADQPDDFARGSFKIRGASGDLSMLVTDVPPGNSRLFLSFVIEDPAEALNVAAEVVPATSIFSLDISNMGCVPSLTITHEWIGGNFAPYEITEPDLNTINSDHGDV-----SGGVGVFQDNWAGSSPAAKRYILYSGLDVDTSQVLGEYKGRMFLPFVTSETPPTWRSTARVSGEIVYM 251
BLAST of mRNA_F-distichus_contig10579.486.1 vs. uniprot
Match: A0A8J4AYK2_9CHLO (WSC domain-containing protein n=3 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AYK2_9CHLO) HSP 1 Score: 70.9 bits (172), Expect = 8.750e-9 Identity = 43/120 (35.83%), Postives = 60/120 (50.00%), Query Frame = 3
Query: 483 IEPTDSGYIGCYA-DMISDRVMTSALI---MPDLTPEACSAVCADMGKFYYSLQQGNECWCAGCQLTDFETTTDYDRHGLGTCNVPCAGDPSASCGGDMSFSLYQSGSCVATPAPTPPIP 830
+ PT + Y+GCY D R + ++ + +LTP C + + G YY LQ GN+CW G L+ T+ TCNVPC GD + +CGG S ++Y T AP PP P
Sbjct: 11 LHPTGNNYLGCYKEDSTGTRRLLPVILANRVNNLTPSLCQQLASAQGLLYYGLQNGNQCW-GGTSLS-LATSLGPST----TCNVPCTGDKTKTCGGSWSNAIY------ITLAPPPPRP 118
BLAST of mRNA_F-distichus_contig10579.486.1 vs. uniprot
Match: UPI001061B8BB (polysaccharide lyase family 7 protein n=1 Tax=Paraglaciecola marina TaxID=2500157 RepID=UPI001061B8BB) HSP 1 Score: 70.5 bits (171), Expect = 1.640e-8 Identity = 50/156 (32.05%), Postives = 76/156 (48.72%), Query Frame = 3
Query: 12 TQVTGLTASANGYDDRMEDWGCAPSGCLPSNAIDGSLEYASRWSCIRYLIDGYNWNDNSQMCELTLDLPTPTDIKEVRAALWKGHKRSRSFNIVADGEVTGNLT------SSGTTEIYETYDVTAILASKIVLQAQDTSDDNSWFSLLEIQLMTES 461
T G + +DD G + S PSNAIDGS +ASRW+ + S LTL+L ++K+V + +G RS +F I A +GN T SSG + E YDVT A ++ ++AQ S +SW ++ E+++ E+
Sbjct: 159 TGTDGELTISTAFDD-----GTSHSNYPPSNAIDGSSAWASRWAA----------SLGSNATNLTLELEEVQNVKQVGISWGRGDSRSHTFEIYARPGTSGNWTKIADTVSSGNSTDIELYDVTDFDAQQVRVKAQSNSAGSSWMNITEVKIYGEN 299
BLAST of mRNA_F-distichus_contig10579.486.1 vs. uniprot
Match: A0A5N5L0U4_9PEZI (WSC domain-containing protein n=1 Tax=Coniochaeta sp. 2T2.1 TaxID=1571157 RepID=A0A5N5L0U4_9PEZI) HSP 1 Score: 68.2 bits (165), Expect = 8.140e-8 Identity = 51/158 (32.28%), Postives = 74/158 (46.84%), Query Frame = 3
Query: 477 TPIEPTDSGYIGCYADMISDRVMTS-ALIMPDLTPEACSAVCADMGKFYYSLQQGNECWCAGCQLTDFETTTDYDRHGLGTCNVPCAGDPSASCGGDMSFSLYQSGSCVATPAPTPPIPDSGCPAGSIQSSLEVTLSYEGVERYLELNVEEPSGTRAI 947
TP+ PT +GCY + + R + + L D+T E C+A C+ F+ L+ G ECWC + D D G CN+PCAGDPS +CGG + ++Y + P P SG PA + + +Y G EP+G RA+
Sbjct: 342 TPLYPTA---LGCYVEGSTGRALRNLVLASDDMTIEFCTATCSPYFAFF-GLEFGRECWCDS--VIDRTAWLSPDA---GLCNMPCAGDPSETCGGRSTINIYGT-------LPEGSSPPSGPPATT-------SYTYSGC-------FAEPAGGRAL 469
BLAST of mRNA_F-distichus_contig10579.486.1 vs. uniprot
Match: A0A179IF78_CORDF (Uncharacterized protein n=1 Tax=Cordyceps confragosa TaxID=2714763 RepID=A0A179IF78_CORDF) HSP 1 Score: 67.4 bits (163), Expect = 1.800e-7 Identity = 55/172 (31.98%), Postives = 72/172 (41.86%), Query Frame = 3
Query: 486 EPTDSGYIGCYADMISD-RVMTSALIMPD-LTPEACSAVCADMGKFYYSLQQGNECWCAGCQLTDFETTTDYDRHGLGTCNVPCAGDPSASCGGDMSFSLYQSGSCVATPAPTPPIPDSGCPA--------GSIQSSLEVTLSYEGVERYLE-LNVEEPSGTRAIDYDKGDV 968
E D Y GCY D ++ R P +TP+ C CA+ G L+ G EC+C Q + +T D CNVPCAGDPSA CGG S Y G P T P +G PA G L + + G +LE P+ T A + D ++
Sbjct: 123 EVGDWKYQGCYEDNVNQSRTFFWQNFFPKVMTPKMCLDRCAEFGYMAAGLEYGQECYCGDPQNIIVQKSTKKDDK---ECNVPCAGDPSALCGGGSRLSTYFWGG---KPFYTWDFPAAGTPAAGSYDFLIGGTNIPLITSQAINGKVTFLEKFGTGPPNSTGAYELDLSEI 288
BLAST of mRNA_F-distichus_contig10579.486.1 vs. uniprot
Match: A0A2T3AKG2_9PEZI (WSC domain-domain-containing protein n=1 Tax=Coniella lustricola TaxID=2025994 RepID=A0A2T3AKG2_9PEZI) HSP 1 Score: 63.9 bits (154), Expect = 6.600e-7 Identity = 33/95 (34.74%), Postives = 51/95 (53.68%), Query Frame = 3
Query: 504 YIGCYADMISDRVMTSA-LIMPDLTPEACSAVCADMGKFYYSLQQGNECWCAGCQLTDFETTTDYDRHGLGTCNVPCAGDPSASCGGDMSFSLYQ 785
YIGC+ + R + SA L ++T + C + C G YY L+ G EC+C + T ++ + +CN+PCAGD + +CGG SLY+
Sbjct: 24 YIGCFREGTDSRALDSASLTASNMTLQGCKSYCE--GHRYYGLEHGTECYCG------YRTISNPHQVPESSCNLPCAGDLTQTCGGSNLISLYR 110
BLAST of mRNA_F-distichus_contig10579.486.1 vs. uniprot
Match: A0A162KQ21_CORDF (Galactose oxidase, beta-propeller n=1 Tax=Akanthomyces lecanii RCEF 1005 TaxID=1081108 RepID=A0A162KQ21_CORDF) HSP 1 Score: 64.7 bits (156), Expect = 1.550e-6 Identity = 53/172 (30.81%), Postives = 72/172 (41.86%), Query Frame = 3
Query: 486 EPTDSGYIGCYADMISD-RVMTSALIMPD-LTPEACSAVCADMGKFYYSLQQGNECWCAGCQLTDFETTTDYDRHGLGTCNVPCAGDPSASCGGDMSFSLYQSGSCVATPAPTPPIPDSGCPA--------GSIQSSLEVTLSYEGVERYLE-LNVEEPSGTRAIDYDKGDV 968
E D Y GCY D ++ RV P+ +TP+ C CAD G L+ G EC+C Q + + D CN+PCAG+ SA CGG S Y G P T P +G PA G L + + G +LE P+ T A + D ++
Sbjct: 866 EVGDWKYQGCYQDNVNQSRVFFWQNFFPNVMTPQMCLDRCADFGYMAAGLEYGQECYCGDPQNIIVQKSPKKDEK---ECNIPCAGNSSALCGGGSRMSTYFWGG---KPFYTWDFPAAGTPAAGSYDFLIGGTNIPLITSQAINGKVTFLEKFGTGPPNSTGAYELDLSEI 1031 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10579.486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10579.486.1 >prot_F-distichus_contig10579.486.1 ID=prot_F-distichus_contig10579.486.1|Name=mRNA_F-distichus_contig10579.486.1|organism=Fucus distichus monoicous|type=polypeptide|length=721bp MEDWGCAPSGCLPSNAIDGSLEYASRWSCIRYLIDGYNWNDNSQMCELTLback to top mRNA from alignment at F-distichus_contig10579:2380..10323+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10579.486.1 ID=mRNA_F-distichus_contig10579.486.1|Name=mRNA_F-distichus_contig10579.486.1|organism=Fucus distichus monoicous|type=mRNA|length=7944bp|location=Sequence derived from alignment at F-distichus_contig10579:2380..10323+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10579:2380..10323+ >mRNA_F-distichus_contig10579.486.1 ID=mRNA_F-distichus_contig10579.486.1|Name=mRNA_F-distichus_contig10579.486.1|organism=Fucus distichus monoicous|type=CDS|length=4326bp|location=Sequence derived from alignment at F-distichus_contig10579:2380..10323+ (Fucus distichus monoicous)back to top |