mRNA_F-distichus_contig10564.481.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10564.481.1
Unique NamemRNA_F-distichus_contig10564.481.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10564.481.1 vs. uniprot
Match: D7FHH9_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH9_ECTSI)

HSP 1 Score: 644 bits (1661), Expect = 3.780e-224
Identity = 320/390 (82.05%), Postives = 347/390 (88.97%), Query Frame = 1
Query:   91 VAMSVMIETSLGDLVIDLFCKEAPLATKNFIKLCKIKYYNGCLFYNVQQNFMIQTGDPTATGKGGTSLYGLIYGDQARFFEDEFGATTRKHDEAGLVSMANMGVPDSNGSQFFFSMRGEDMQHLDGKHTIFAKVMEGMDTLEAINGQFCDDNGRPYRDLRILHTYVLDDPFEDPPQLVIPDESPSRERPEEEMVPQRLGALDKVSLEIDEGMELEREKQVREKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRFGNCRAEIIRDHITGESLNYSFVEFDAVESCEEAYKKMHNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLASGKGSKTIQQQHFGGKDPAGAGKPTPIAAIKSDVGSQRRSKWNNAP 1260
            V MSVMIETSLG++V+DLFC++APLA KNF+KLCKIKYYNGCLFYNVQQNFMIQ GDPTATGKGGTS+YGL+YG+QARFFEDE  AT+RKHDEAGL+SMANMGVP+SNGSQFFFSMRG+DMQHLDGKHT+FAKVMEGM+TLE INGQFCDDNGRPYRD+RILHTYVLDDPF+DPPQLV+PDESP R+RPEEE V  RLGALDKVSLE DE  ELEREKQ+REKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRFG CRAEI RDHITG+SLNY+FVEF+A+ESCEEA+KKM+NVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLASGKG K  QQ         G        A     G  R+SKW NAP
Sbjct:   10 VEMSVMIETSLGEVVVDLFCEDAPLAAKNFLKLCKIKYYNGCLFYNVQQNFMIQAGDPTATGKGGTSVYGLMYGEQARFFEDEISATSRKHDEAGLLSMANMGVPNSNGSQFFFSMRGDDMQHLDGKHTVFAKVMEGMETLEEINGQFCDDNGRPYRDIRILHTYVLDDPFDDPPQLVVPDESPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQLREKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLASGKGGKPAQQPQQNNTQRDGHASGGGHGA----AGQHRKSKWGNAP 395          
BLAST of mRNA_F-distichus_contig10564.481.1 vs. uniprot
Match: A0A836CGJ7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGJ7_9STRA)

HSP 1 Score: 501 bits (1290), Expect = 7.010e-169
Identity = 250/353 (70.82%), Postives = 297/353 (84.14%), Query Frame = 1
Query:   97 MSVMIETSLGDLVIDLFCKEAPLATKNFIKLCKIKYYNGCLFYNVQQNFMIQTGDPTATGKGGTSLYGLIYGDQARFFEDEFGATTRKHDEAGLVSMANMGVPDSNGSQFFFSMRGEDMQHLDGKHTIFAKVMEGMDTLEAINGQFCDDNGRPYRDLRILHTYVLDDPFEDPPQLVIPDESPSRERPEEEMVPQRLGALDKVSLEIDEGMELER-EKQVREKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRFGNCRAEIIRDHITGESLNYSFVEFDAVESCEEAYKKMHNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLASGKGSKTIQQ 1152
            MSVM+ETSLG +V+DLFC EAPLA KNF+KLCKIKYYNGCLFYNVQQNFM Q+GDPTATGKGGTS+YGL+YG+QARFF DE    TRKHD  GL+ MANMG P +NGS    ++RG+D+ HLDGKHTIF  V EG++ L+ +N QF D++GRP+RD+R+LHT VLDDP++DPPQL +PD SP R+RPEEE V  RLGA +  +L  D+G   E  EK +R++ A+S+AVVLEMIGDLPDAD  PPENVLFVCKLNPVTTDDDLEIIFTRFG C+AEI+RDHITG+SLNY+FVEF+ VE+CEEA+KKM+NVLIDDRRIRVDFSQSVAKEW KY+ RA GGQKL SG+G+   +Q
Sbjct:    1 MSVMLETSLGSIVVDLFCDEAPLACKNFLKLCKIKYYNGCLFYNVQQNFMAQSGDPTATGKGGTSVYGLMYGEQARFFNDEV-HPTRKHDAKGLLCMANMGAPHTNGSHD--TLRGDDLTHLDGKHTIFGVVEEGLEVLDELNAQFTDEDGRPFRDIRVLHTPVLDDPYDDPPQLDVPDASPVRDRPEEERVVPRLGAHE--ALHPDDGKSAEEIEKALRDREAKSHAVVLEMIGDLPDADAAPPENVLFVCKLNPVTTDDDLEIIFTRFGPCKAEIVRDHITGDSLNYAFVEFETVEACEEAFKKMNNVLIDDRRIRVDFSQSVAKEWGKYRLRAAGGQKLKSGQGAPPRRQ 348          
BLAST of mRNA_F-distichus_contig10564.481.1 vs. uniprot
Match: A0A6H5JBH5_9PHAE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH5_9PHAE)

HSP 1 Score: 496 bits (1276), Expect = 1.230e-166
Identity = 250/344 (72.67%), Postives = 274/344 (79.65%), Query Frame = 1
Query:   97 MSVMIETSLGDLVIDLFCKEAPLATKNFIKLCKIKYYNGCLFYNVQQNFMIQTGDPTATGKGGTSLYGLIYGDQARFFEDEFGATTRKHDEAGLVSMANMGVPDSNGSQFFFSMRGEDMQHLDGKHTIFAKVMEGMDTLEAINGQFCDDNGRPYRDLRILHTYVLDDPFEDPPQLVIPDESPSRERPEEEMVPQRLGALDKVSLEIDEGMELEREKQVREKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTR----------------FGNCRAEIIRDHITGESLNYSFVEFDAVESCEEAYKKMHNVLIDDRRIRVDFSQSVAKEW 1080
            MSVMIETSLG++V+DLFC++APLA KNF+KLCKIKYYNGCLFYNVQQNFM+QTGDPTATGKGGTS+YGL+YG+QAR       AT+RKHDEAGL+SMANMGVP+SNGSQFFFSMRG+DMQHLDGKHT+FAKVMEGM+TLE INGQFCDDNGRPYRD+RILHTYVLDDPF+DPPQL                                           REKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTR                FG CRAEI RDHITG+SLNY+FVEF+A+ESCEEA+KKM+NVLIDDRRIRVDFSQSVAKEW
Sbjct:    1 MSVMIETSLGEVVVDLFCEDAPLAAKNFLKLCKIKYYNGCLFYNVQQNFMVQTGDPTATGKGGTSVYGLMYGEQAR-------ATSRKHDEAGLLSMANMGVPNSNGSQFFFSMRGDDMQHLDGKHTVFAKVMEGMETLEEINGQFCDDNGRPYRDIRILHTYVLDDPFDDPPQL-------------------------------------------REKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRHEIHPTSACFLSLITWFGTCRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEW 294          
BLAST of mRNA_F-distichus_contig10564.481.1 vs. uniprot
Match: W7U8L5_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8L5_9STRA)

HSP 1 Score: 436 bits (1121), Expect = 6.660e-144
Identity = 224/349 (64.18%), Postives = 277/349 (79.37%), Query Frame = 1
Query:   97 MSVMIETSLGDLVIDLFCKEAPLATKNFIKLCKIKYYNGCLFYNVQQNFMIQTGDPTATGKGGTSLYGLIYGDQARFFEDEFGATTRKHDEAGLVSMANMGVPDSNGSQFFFSMRGEDMQHLDGKHTIFAKVMEGMDT-LEAINGQFCDDNGRPYRDLRILHTYVLDDPFEDPPQL--VIPDESPSRERPEEEMVPQRLGALDKVSLEIDE-GMELER-EKQVREKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRFGN-CRAEIIRDHITGESLNYSFVEFDAVESCEEAYKKMHNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLAS 1125
            MSVM+ET+LG+LV+DL+C + PLA KNF+KLCK KYYN  L YNVQQNFMIQTGDP+ TG+GGTS+YG++YG+QA++FEDE      KH   GLV MA+ G  + N SQF+ +MRGEDM+ LDGKHTIF +V EG+DT L+ IN  +CD +GRPYRD+RILHTYVLDDPF+DP  +  +IPD SP+R RPE E V  RL     + LE +E G+  E  E+++RE  A   AVVLEMIGDLPDA++KPPENVLFVCKLNP+TTD+DLEIIF+RFG   +AEI RD +TG+SLNY+FVEFD VESCEEAYKKM+N L+DDRRI+VDFSQSVAK+W++Y  R +G  K+ S
Sbjct:    1 MSVMLETTLGELVVDLYCDKCPLAAKNFLKLCKTKYYNDVLVYNVQQNFMIQTGDPSGTGRGGTSIYGMLYGEQAKYFEDEIRLPQLKHSRPGLVCMASSGE-NQNTSQFYITMRGEDMEFLDGKHTIFGEVAEGLDTVLKEINELYCDTDGRPYRDVRILHTYVLDDPFDDPKGIEDLIPDASPARGRPEAESVNPRL-----IDLEDEEDGLTAEALEERIREVEANKRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSRFGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRPRGSTKIKS 343          
BLAST of mRNA_F-distichus_contig10564.481.1 vs. uniprot
Match: A0A8K1FD03_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD03_PYTOL)

HSP 1 Score: 417 bits (1072), Expect = 2.320e-138
Identity = 210/335 (62.69%), Postives = 261/335 (77.91%), Query Frame = 1
Query:   97 MSVMIETSLGDLVIDLFCKEAPLATKNFIKLCKIKYYNGCLFYNVQQNFMIQTGDPTATGKGGTSLYGLIYGDQARFFEDEFGATTRKHDEAGLVSMANMGVPDSNGSQFFFSMRGEDMQHLDGKHTIFAKVMEGMDTLEAINGQFCDDNGRPYRDLRILHTYVLDDPFEDPPQLVIPDESPSRERPEEEMVPQRLGALDKVSLEIDEGM-ELEREKQVREKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRFGNCRAEIIRDHITGESLNYSFVEFDAVESCEEAYKKMHNVLIDDRRIRVDFSQSVAKEWSKYKGR 1098
            MSV++ET+LG+LV+DL+    PLAT+NF+KLCK KYYN  LF+NVQ+NFM+Q GDPT TGKGG S+YG +YG+QARFF+DE      KH++ GL+ MAN G P++NGSQF+ + R ED+++LDGKHTIF +V EGMD L+ IN  F D   RPY+D+RI HTY+L+DPF DP  L +P ESP RERPEEE V  RL A +K  L+ DEG  E E EK +REK A+S AVVLEMIGDLPDAD+KPPE VLFVCKLN VT  +DL++ F RFG C++E+IRD  TGESL Y+F+EF     CEEAY KM+NVL+DDRRI+VDFSQSV+K W+K+K R
Sbjct:    1 MSVLVETTLGELVVDLYVDACPLATRNFLKLCKTKYYNNVLFFNVQENFMVQAGDPTGTGKGGMSIYGQLYGEQARFFDDEV-RPQLKHNKKGLLGMANTG-PNTNGSQFYITTRAEDLEYLDGKHTIFGEVAEGMDVLDKINALFVDKEYRPYQDVRIKHTYILEDPFPDPELLQVPPESPKRERPEEETVEVRLAADEK--LDDDEGRTEEEIEKSLREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNAVTESEDLDMAFCRFGPCKSEVIRDSKTGESLCYAFIEFQEKSHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKFKRR 331          
BLAST of mRNA_F-distichus_contig10564.481.1 vs. uniprot
Match: H3G7W7_PHYRM (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Phytophthora TaxID=4783 RepID=H3G7W7_PHYRM)

HSP 1 Score: 397 bits (1020), Expect = 3.720e-131
Identity = 211/339 (62.24%), Postives = 257/339 (75.81%), Query Frame = 1
Query:   97 MSVMIETSLGDLVIDLFCKEAPLATKNFIKLCKIKYYNGCLFYNVQQNFMIQTGDPTATGKGGTSLYGLIYGDQARFFEDEFG-ATTRKH-DEAGLVSMANMGVPDSNGSQFFFSMRGEDMQHLDGKHTIFAKVMEGMDTLEAINGQFCDDNGRPYRDLRILHTYVLDDPFEDPPQL--VIPDESPSRERPEEEMVPQRLGALDKVSLEIDEGM-ELEREKQVREKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRFGNCRAEIIRDHITGESLNYSFVEFDAVESCEEAYKKMHNVLIDDRRIRVDFSQSVAKEWSKYKGR 1098
            MSV++ET+LG LV+DLF ++ PLA  NF+KLCK KYY+GCLF+NVQ+NFM+Q GDPTATG GG S+YG +YG QARFFEDE   A  R H D +GL+ MA+ G  + N SQF+ + R EDM +LD +HTIF +V EGMD L  IN  F D + RPY+D+RI HTYVL+DPF DP  L  +IP  SP+RERPE+E V  RL A +K  L+ +EG  E E EK VREK A+S AVVLEMIGDLPDAD+KPPE VLFVCKLNPVT   DL++ F RFG C+AE+IRD  TG+SL ++FVEF     CEEAY KM+NVL+DDRRI+VDFSQSV+K W+K K R
Sbjct:    1 MSVLVETTLGALVLDLFVEDCPLACTNFLKLCKTKYYHGCLFFNVQENFMVQAGDPTATGGGGDSIYGKLYGAQARFFEDELPRAKGRSHQDRSGLLGMAS-GSANQNASQFYITTRAEDMAYLDEQHTIFGEVAEGMDVLAEINALFVDKDHRPYQDVRIKHTYVLEDPFPDPKGLDELIPPSSPTRERPEQEQVEPRLAADEK--LDENEGRTEQEIEKAVREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCRFGQCKAEVIRDQKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRR 336          
BLAST of mRNA_F-distichus_contig10564.481.1 vs. uniprot
Match: A0A3R7J9B4_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J9B4_9STRA)

HSP 1 Score: 399 bits (1024), Expect = 8.000e-131
Identity = 215/363 (59.23%), Postives = 265/363 (73.00%), Query Frame = 1
Query:   97 MSVMIETSLGDLVIDLFCKEAPLATKNFIKLCKIKYYNGCLFYNVQQNFMIQTGDPTATGKGGTSLYGLIYGDQARFFEDEFGATT-RKH-DEAGLVSMANMGVPDSNGSQFFFSMRGEDMQHLDGKHTIFAKVMEGMDTLEAINGQFCDDNGRPYRDLRILHTYVLDDPFEDPPQL--VIPDESPSRERPEEEMVPQRLGALDKVSLEIDEGM-ELEREKQVREKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRFGNCRAEIIRDHITGESLNYSFVEFDAVESCEEAYKKMHNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLASGKGSKTIQQQHFGGK 1170
            MSV++ET+LG LV+DLF  E PLA  NF+KLCK KYY+GCLF+NVQ+NFM Q GDPTATG GG S+YG +YG QARFFEDE      R H D +GL+ MA+ G  + N SQF+ + R EDM +LD +HTIF +V EGMD L+ IN  F D+  RPY+D+RI HTYVL+DPF DP  L  +IP  SP+RERPE+E V  RL A +K  L+ +EG  E E EK VREK A+S AVVLEMIGDLPDAD+KPPE VLFVCKLNPVT   DL++ F RFG C++E+IRD  TG+SL ++FVEF     CEEAY KM+NVL+DDRRI+VDFSQSV+K W+K K R   G+K+    G     ++  GG+
Sbjct:    1 MSVLVETTLGALVLDLFVDECPLACTNFLKLCKTKYYHGCLFFNVQENFMAQAGDPTATGAGGDSIYGALYGAQARFFEDELPKPRGRSHEDRSGLLGMASSGSTNQNASQFYLTTRTEDMAYLDEQHTIFGEVAEGMDVLDQINALFVDEEYRPYQDVRIKHTYVLEDPFPDPKGLEELIPPTSPTRERPEQEQVEPRLAADEK--LDDNEGRTEQEIEKAVREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCRFGPCKSEVIRDVKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKAKRR---GEKMNKSDGDVYANERKKGGR 358          
BLAST of mRNA_F-distichus_contig10564.481.1 vs. uniprot
Match: F0W8Y3_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8Y3_9STRA)

HSP 1 Score: 399 bits (1025), Expect = 1.180e-130
Identity = 199/331 (60.12%), Postives = 253/331 (76.44%), Query Frame = 1
Query:   97 MSVMIETSLGDLVIDLFCKEAPLATKNFIKLCKIKYYNGCLFYNVQQNFMIQTGDPTATGKGGTSLYGLIYGDQARFFEDEFGATTRKHDEAGLVSMANMGVPDSNGSQFFFSMRGEDMQHLDGKHTIFAKVMEGMDTLEAINGQFCDDNGRPYRDLRILHTYVLDDPFEDPPQLVIPDESPSRERPEEEMVPQRLGALDKVSLEIDEGMELEREKQVREKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRFGNCRAEIIRDHITGESLNYSFVEFDAVESCEEAYKKMHNVLIDDRRIRVDFSQSVAKEWSKY 1089
            MSV++ T+LGD+VIDLF +E P+A  NF+KLCK+KYYN  LF+NVQ+NFMIQTGDPT TGKGG SLYG +YG QA FF+DEF     KH+  G V+MAN G P++N SQF+ +   +++++LDGKHTIF  V EG+D ++ IN  F D + RPY+D+RILHT++LDDPF DP     P  SP+R+RPEEE VP R+ A ++     DE    E EK VREK A+S AVVLEMIGD+PDAD+KPPE VLFVCKLNPVT   DL++ F RFG C++E+IRD  TG+SL Y+FVEF   + CEEAY KM+NVL+DDRRI+VDFSQSV+K W+++
Sbjct:    1 MSVLLATTLGDIVIDLFTQECPIACTNFLKLCKMKYYNNVLFFNVQENFMIQTGDPTGTGKGGDSLYGQLYGAQAHFFQDEF-RPQLKHNRKGTVAMANTG-PNTNTSQFYITTHNDNLEYLDGKHTIFGHVAEGIDIIDKINQLFVDKDFRPYQDVRILHTFILDDPFPDPKNFQTPASSPTRDRPEEESVPVRMAADEEPE---DERTAEEIEKSVREKEAKSRAVVLEMIGDIPDADIKPPEEVLFVCKLNPVTESSDLDMAFCRFGACKSEVIRDFKTGDSLCYAFVEFTEKKHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNQF 326          
BLAST of mRNA_F-distichus_contig10564.481.1 vs. uniprot
Match: A0A024FZM9_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024FZM9_9STRA)

HSP 1 Score: 398 bits (1023), Expect = 2.440e-130
Identity = 204/357 (57.14%), Postives = 266/357 (74.51%), Query Frame = 1
Query:   97 MSVMIETSLGDLVIDLFCKEAPLATKNFIKLCKIKYYNGCLFYNVQQNFMIQTGDPTATGKGGTSLYGLIYGDQARFFEDEFGATTRKHDEAGLVSMANMGVPDSNGSQFFFSMRGEDMQHLDGKHTIFAKVMEGMDTLEAINGQFCDDNGRPYRDLRILHTYVLDDPFEDPPQLVIPDESPSRERPEEEMVPQRLGALDKVSLEIDEGMELER-EKQVREKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRFGNCRAEIIRDHITGESLNYSFVEFDAVESCEEAYKKMHNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLASGKGSKTIQQQHFG 1164
            MSV++ T+LGD+VIDLF +E P+A  NF+KLCK+KYYN  LF+NVQ+NFMIQTGDPT TGKGG S+YG +YG QA FF+DEF +   KH+  G V+MAN G P++N SQF+ +   E++++LDGKHTIF  V EG++ ++ IN  F D + RPY+D+RILHTY+LDDPF DP     P  SP+R+RPEEE VP R+ A +    E ++G   E  EK VR K A+S AVVLEMIGD+PDAD+KPPE VLFVCKLNPVT   DL++ F RFG C++E+IRD+ TG+SL Y+FVEF   + CEEAY KM+NVL+DDRRI+VDFSQSV+K W+++  + + GQ +A  K S   ++   G
Sbjct:    1 MSVLLSTTLGDIVIDLFTQECPIACTNFLKLCKLKYYNNVLFFNVQENFMIQTGDPTGTGKGGDSMYGQLYGAQAHFFQDEFHSNL-KHNRKGTVAMANTG-PNTNTSQFYITTSHENLEYLDGKHTIFGHVAEGIEIIDKINELFVDKDYRPYQDVRILHTYILDDPFPDPKNFQAPASSPARDRPEEESVPVRVAADE----EPEDGRTAEEIEKSVRAKEAKSRAVVLEMIGDIPDADIKPPEEVLFVCKLNPVTESSDLDMAFCRFGACKSEVIRDYKTGDSLCYAFVEFTEKKHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNQFSRKNKKGQ-VADDKSSSQSRKSGLG 350          
BLAST of mRNA_F-distichus_contig10564.481.1 vs. uniprot
Match: A0A3M6VRY9_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRY9_9STRA)

HSP 1 Score: 398 bits (1023), Expect = 1.790e-129
Identity = 208/339 (61.36%), Postives = 257/339 (75.81%), Query Frame = 1
Query:   97 MSVMIETSLGDLVIDLFCKEAPLATKNFIKLCKIKYYNGCLFYNVQQNFMIQTGDPTATGKGGTSLYGLIYGDQARFFEDEFGATTRK--HDEAGLVSMANMGVPDSNGSQFFFSMRGEDMQHLDGKHTIFAKVMEGMDTLEAINGQFCDDNGRPYRDLRILHTYVLDDPFEDPPQL--VIPDESPSRERPEEEMVPQRLGALDKVSLEIDEGM-ELEREKQVREKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRFGNCRAEIIRDHITGESLNYSFVEFDAVESCEEAYKKMHNVLIDDRRIRVDFSQSVAKEWSKYKGR 1098
            MSV++ET+LG LV+DL+  E PLA  NF+KLCK KYY+GCLF+NVQ+NFM+QTGDPTATG GG S+YG +YG QARFFEDE     R+   D  GL+ MA+ G+ + NGSQ + + R +DM +LD +HTIF +V EGMD L+ IN  + D + RPY+D+RI HTYVLDDPF DP  L  +IP  SP+RERPE+E V  RL A +K  L+ +EG  E E EK VREK A+S AVVLEMIGDLPDAD+KPPE VLFVCKLNPVT   DL++ F RFG C++E+IRD  TG+SL ++FVEF     CEEAY KM+NVL+DDRRI+VDFSQSV+K W+K K R
Sbjct:    1 MSVLVETTLGALVLDLYVDECPLACTNFLKLCKTKYYHGCLFFNVQENFMVQTGDPTATGNGGDSIYGHLYGAQARFFEDELPQPIRRSHEDRKGLLGMAS-GLANQNGSQVYLTTRADDMAYLDEQHTIFGEVAEGMDVLDRINALYVDKDYRPYQDVRIKHTYVLDDPFPDPKGLEELIPSSSPTRERPEQEQVEPRLAADEK--LDDNEGRTEQEIEKAVREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCRFGTCKSEVIRDQKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRR 336          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10564.481.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHH9_ECTSI3.780e-22482.05Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectoca... [more]
A0A836CGJ7_9STRA7.010e-16970.82Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
A0A6H5JBH5_9PHAE1.230e-16672.67Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectoca... [more]
W7U8L5_9STRA6.660e-14464.18Peptidyl-prolyl cis-trans isomerase n=2 Tax=Monodo... [more]
A0A8K1FD03_PYTOL2.320e-13862.69Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3G7W7_PHYRM3.720e-13162.24Peptidyl-prolyl cis-trans isomerase n=4 Tax=Phytop... [more]
A0A3R7J9B4_9STRA8.000e-13159.23Peptidyl-prolyl cis-trans isomerase n=2 Tax=Phytop... [more]
F0W8Y3_9STRA1.180e-13060.12Peptidyl-prolyl cis-trans isomerase n=1 Tax=Albugo... [more]
A0A024FZM9_9STRA2.440e-13057.14Peptidyl-prolyl cis-trans isomerase n=2 Tax=Albugo... [more]
A0A3M6VRY9_9STRA1.790e-12961.36Peptidyl-prolyl cis-trans isomerase n=1 Tax=Perono... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10564contigF-distichus_contig10564:2197..8366 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score647.1
Seed ortholog evalue7.8e-183
Seed eggNOG ortholog2880.D7FHH9
Preferred namePPIL4
KEGG koko:K03061,ko:K05012,ko:K09517,ko:K12735,ko:K12737
KEGG TC2.A.49.1.1,2.A.49.1.2,2.A.49.1.3,2.A.49.2.2,2.A.49.2.3,2.A.49.2.8
KEGG Pathwayko03050,ko04141,ko05169,map03050,map04141,map05169
KEGG ModuleM00341
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000375,GO:0000377,GO:0000398,GO:0000413,GO:0000414,GO:0000416,GO:0000502,GO:0000785,GO:0000790,GO:0000993,GO:0001098,GO:0001099,GO:0001932,GO:0001934,GO:0002119,GO:0002164,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005694,GO:0005737,GO:0005829,GO:0005838,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006950,GO:0007275,GO:0008134,GO:0008150,GO:0008152,GO:0008380,GO:0008540,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010470,GO:0010498,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010628,GO:0010638,GO:0010720,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016859,GO:0016887,GO:0017025,GO:0017111,GO:0018130,GO:0018193,GO:0018208,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0019941,GO:0022603,GO:0022624,GO:0030162,GO:0030163,GO:0030433,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031399,GO:0031401,GO:0031595,GO:0031597,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032774,GO:0032784,GO:0032786,GO:0032991,GO:0033043,GO:0033044,GO:0033120,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0034976,GO:0035327,GO:0036211,GO:0036402,GO:0036503,GO:0040008,GO:0040019,GO:0040026,GO:0040028,GO:0042176,GO:0042221,GO:0042325,GO:0042327,GO:0042623,GO:0043161,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043412,GO:0043484,GO:0043632,GO:0043900,GO:0043902,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044454,GO:0044464,GO:0044877,GO:0045595,GO:0045597,GO:0045732,GO:0045862,GO:0045893,GO:0045898,GO:0045899,GO:0045927,GO:0045935,GO:0045937,GO:0045944,GO:0045995,GO:0046483,GO:0048518,GO:0048522,GO:0048580,GO:0048582,GO:0048638,GO:0048639,GO:0048856,GO:0050684,GO:0050685,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051569,GO:0051571,GO:0051603,GO:0051716,GO:0060255,GO:0060260,GO:0060261,GO:0060281,GO:0060282,GO:0060284,GO:0061062,GO:0061063,GO:0061136,GO:0065007,GO:0070013,GO:0070063,GO:0071012,GO:0071013,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140096,GO:1901360,GO:1901362,GO:1901363,GO:1901407,GO:1901409,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901698,GO:1901800,GO:1902275,GO:1902494,GO:1902680,GO:1903050,GO:1903052,GO:1903311,GO:1903313,GO:1903362,GO:1903364,GO:1903506,GO:1903508,GO:1905269,GO:1905368,GO:1905369,GO:1905435,GO:1905437,GO:1905471,GO:1905473,GO:1905879,GO:1905881,GO:1990904,GO:2000026,GO:2000112,GO:2000142,GO:2000144,GO:2000241,GO:2000243,GO:2000543,GO:2001141,GO:2001160,GO:2001162,GO:2001163,GO:2001165,GO:2001252,GO:2001253,GO:2001255
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0415@2759
Ec32 ortholog descriptionCyclophilin
Ec32 orthologEc-25_002310.1
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041,ko03051,ko03110,ko04040
Exons9
Model size1863
Cds size1767
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10564.481.1prot_F-distichus_contig10564.481.1Fucus distichus monoicouspolypeptideF-distichus_contig10564 2197..8270 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928981.0813136-CDS-F-distichus_contig10564:2196..29801622928981.0813136-CDS-F-distichus_contig10564:2196..2980Fucus distichus monoicousCDSF-distichus_contig10564 2197..2980 -
1690885090.6311762-CDS-F-distichus_contig10564:2196..29801690885090.6311762-CDS-F-distichus_contig10564:2196..2980Fucus distichus monoicousCDSF-distichus_contig10564 2197..2980 -
1622928981.0961008-CDS-F-distichus_contig10564:3234..33141622928981.0961008-CDS-F-distichus_contig10564:3234..3314Fucus distichus monoicousCDSF-distichus_contig10564 3235..3314 -
1690885090.6474829-CDS-F-distichus_contig10564:3234..33141690885090.6474829-CDS-F-distichus_contig10564:3234..3314Fucus distichus monoicousCDSF-distichus_contig10564 3235..3314 -
1622928981.1089578-CDS-F-distichus_contig10564:3555..36551622928981.1089578-CDS-F-distichus_contig10564:3555..3655Fucus distichus monoicousCDSF-distichus_contig10564 3556..3655 -
1690885090.657555-CDS-F-distichus_contig10564:3555..36551690885090.657555-CDS-F-distichus_contig10564:3555..3655Fucus distichus monoicousCDSF-distichus_contig10564 3556..3655 -
1622928981.119693-CDS-F-distichus_contig10564:3806..39581622928981.119693-CDS-F-distichus_contig10564:3806..3958Fucus distichus monoicousCDSF-distichus_contig10564 3807..3958 -
1690885090.6705074-CDS-F-distichus_contig10564:3806..39581690885090.6705074-CDS-F-distichus_contig10564:3806..3958Fucus distichus monoicousCDSF-distichus_contig10564 3807..3958 -
1622928981.1326733-CDS-F-distichus_contig10564:5516..56451622928981.1326733-CDS-F-distichus_contig10564:5516..5645Fucus distichus monoicousCDSF-distichus_contig10564 5517..5645 -
1690885090.6835113-CDS-F-distichus_contig10564:5516..56451690885090.6835113-CDS-F-distichus_contig10564:5516..5645Fucus distichus monoicousCDSF-distichus_contig10564 5517..5645 -
1622928981.1495476-CDS-F-distichus_contig10564:6351..64801622928981.1495476-CDS-F-distichus_contig10564:6351..6480Fucus distichus monoicousCDSF-distichus_contig10564 6352..6480 -
1690885090.6926672-CDS-F-distichus_contig10564:6351..64801690885090.6926672-CDS-F-distichus_contig10564:6351..6480Fucus distichus monoicousCDSF-distichus_contig10564 6352..6480 -
1622928981.1658852-CDS-F-distichus_contig10564:6856..70221622928981.1658852-CDS-F-distichus_contig10564:6856..7022Fucus distichus monoicousCDSF-distichus_contig10564 6857..7022 -
1690885090.7029066-CDS-F-distichus_contig10564:6856..70221690885090.7029066-CDS-F-distichus_contig10564:6856..7022Fucus distichus monoicousCDSF-distichus_contig10564 6857..7022 -
1622928981.233203-CDS-F-distichus_contig10564:7652..77751622928981.233203-CDS-F-distichus_contig10564:7652..7775Fucus distichus monoicousCDSF-distichus_contig10564 7653..7775 -
1690885090.713629-CDS-F-distichus_contig10564:7652..77751690885090.713629-CDS-F-distichus_contig10564:7652..7775Fucus distichus monoicousCDSF-distichus_contig10564 7653..7775 -
1622928981.2500384-CDS-F-distichus_contig10564:8166..82701622928981.2500384-CDS-F-distichus_contig10564:8166..8270Fucus distichus monoicousCDSF-distichus_contig10564 8167..8270 -
1690885090.7221084-CDS-F-distichus_contig10564:8166..82701690885090.7221084-CDS-F-distichus_contig10564:8166..8270Fucus distichus monoicousCDSF-distichus_contig10564 8167..8270 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928981.2703831-UTR-F-distichus_contig10564:8270..83661622928981.2703831-UTR-F-distichus_contig10564:8270..8366Fucus distichus monoicousUTRF-distichus_contig10564 8271..8366 -
1690885090.7343185-UTR-F-distichus_contig10564:8270..83661690885090.7343185-UTR-F-distichus_contig10564:8270..8366Fucus distichus monoicousUTRF-distichus_contig10564 8271..8366 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10564.481.1

>prot_F-distichus_contig10564.481.1 ID=prot_F-distichus_contig10564.481.1|Name=mRNA_F-distichus_contig10564.481.1|organism=Fucus distichus monoicous|type=polypeptide|length=589bp
MSVMIETSLGDLVIDLFCKEAPLATKNFIKLCKIKYYNGCLFYNVQQNFM
IQTGDPTATGKGGTSLYGLIYGDQARFFEDEFGATTRKHDEAGLVSMANM
GVPDSNGSQFFFSMRGEDMQHLDGKHTIFAKVMEGMDTLEAINGQFCDDN
GRPYRDLRILHTYVLDDPFEDPPQLVIPDESPSRERPEEEMVPQRLGALD
KVSLEIDEGMELEREKQVREKTARSNAVVLEMIGDLPDADMKPPENVLFV
CKLNPVTTDDDLEIIFTRFGNCRAEIIRDHITGESLNYSFVEFDAVESCE
EAYKKMHNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLASGKGSKTI
QQQHFGGKDPAGAGKPTPIAAIKSDVGSQRRSKWNNAPSSMPGPTALPAR
GGGSRGDASRERARDEDKTKRGSRWGDGVSEDSVAGSGRDRGDGRGVDDR
LDPLRRGEERPTSNRQKDGTRERVRETGSIRDGNDERRSRAGDEQGRGRH
ERHARKDSRDEGRKGGRHGKNAREKSGSDSPRHDDYGRDDTYGGKNRADN
SYRKGEQRVRHDRTWRSRSRSRERGQEKGSDRGHSRRR*
back to top

mRNA from alignment at F-distichus_contig10564:2197..8366-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10564.481.1 ID=mRNA_F-distichus_contig10564.481.1|Name=mRNA_F-distichus_contig10564.481.1|organism=Fucus distichus monoicous|type=mRNA|length=6170bp|location=Sequence derived from alignment at F-distichus_contig10564:2197..8366- (Fucus distichus monoicous)
AGAGCTCAATAGTTGCAGAGGTGGTGACAACACTCGCCGCCAGCGTAACC TTTGAAGGGTTAGAGCAACCCGAGGAGCGAGTGGGAGAGAGTGGCGATGT CTGTGATGATCGAAACGTCGCTTGGAGACCTGGTGATCGACCTGTTCTGC AAAGAGGCTCCATTGGCGACGAAGAACTTTATCAAGCTTTGCAAAATCAA GTAAGAAGGGTTTCCACAATTTCGCCCCCCTGTCTGAGGGATGTCCAGAA GGTTAAGGTGCGTTCATATTTTTCTTGAAAAACCGTTGTGCGATCGGTAG GCTTTGTCGAAGTGTGCTTTCGAACCGATGGCAAATCTGTCTTTCTTCAC CAGCTTGTGAACTTACCGTGGACGACCCCGTCCAACCACGCTTCATGATT GCAGCGCTTCAAACAAGAGACATCCTTGCCTCGGACAGGAAACTTTGAAC GCCTCCGCACTGCTCTGAAATCCTCGTTACCGTACGCTGATGCACACAAA CGCCTCCGCGCTATGGTTTTGCCACCAAAGATTCATGTCCTTACGATGTG TGTTCCCGGCTCGTGAAACGTCCACTCGGCTCACCGAACAGGTACTACAA CGGCTGCCTTTTCTACAACGTCCAGCAAAACTTCATGATTCAAACGGGAG ATCCCACGGCCACCGGAAAGGGCGGAACATCCCTGTATGGCCTCATCTAC GGCGATCAAGCACGGTGAGAGGGGTTCCTCCATGGTCGTGTCGAGCGTTG TTTGCCGACAGGCGGGCAAGTGATGTTTTACTTTGAGTAGCGGTAGTTTT TACCCGTGTGCCGGAACGTTTCAACGAATAAATCATTCCGACGTGGCGCG GATAGAGATTCGCCACCATTCGCCGTTACAACACGGGTGACGCTATCAAG TTTGTTATCCAGTTGCCGCCAACCAGACGACGATGTCCAATGACCCCCCC CCCCCCCCCCCCCCCCCCCCATCCCCTCTCCTCATGCCACACCCTCCTCT TCTGTTTTTTTGTTTCTTCTCCCCTTTCGCCCTCTTCTCGTTTNNNNNNN NNNAAGCATTCCGAGGGGGGGAGGAGAAGAGTTGGCCCCCATTCCCCGTT ACAACCCGGGGGGCGCTAATAATTTTTTTATCCCTTTGCCGCCAACCAGA TGGCGATGTCCCATGTCCCCCCCCCCCCCCCCCCCACTTTTTGTACACGG CATTTATACCGTTTCAGGCTTTGTGTGCCTTTAGAACCTTGACCTTACGC GCTGATTTTTAACCATGGTTGTCCGATCTCTTTTTCCTCATCGTGGTTTA TCTTGCCTTTTTGTTCGTCTTTTCCGTGTCTCGGTGATATGAAGTTTTTT CGAGGACGAGTTCGGAGCGACGACCCGAAAGCATGACGAGGCTGGTCTGG TTTCAATGGCGAACATGGGCGTCCCGGACTCTAACGGTTCGCAGTTCTTC TTTTCCATGCGGGGCGAAGACATGCAGCACCTGGACGGCAAACACACCAT CTTTGCCAAGGTTTGTCAGCCACGAGCCCCTTTTGACTCGCGCGGCAACG CTACTGGACATCGCATGGTTTGCGCCTTCCTGCGTTTTTTGTCCGCGGTT GATCTCACGCTGTGTATAAAACGACTCAAGAACGACTGCTGCTTCGAGTG ACCGTTGAGGTTTGCAGAGTGCTTCCCCCCGAAAGCGTGTTGCTCTGTGC CGATCTGTGTTCAACTTTCTCGCTTTTAGAGAGAAAAGGGTTCGCATTCC CTTCATCGGCACCGTTGTTCGCCAAGTCCCTGCTGTCCTGCGTAAGCGTG GAAGTGAAGTGAGATGGAAACGTGGGTTGGCGCCGTGGGATTGTTCGCTT CTGCTGCAATGCCTTCGTGCTGATGCTCTCCGCAAGGTCATGGAAGGCAT GGACACCCTCGAGGCAATTAACGGGCAATTCTGCGATGACAACGGGCGCC CCTACCGTGACTTACGCATCCTTCACACCTATGTCTTGGACGACCCTTTC GAAGATCCTCCACAGGTGAAACTGCTCCAGATGTATTGCGAAGACACGAC GACGAGATTGCAGTCTCACTCTTACATATTTAGACACTGGAATGTCGTAT AAATATCGAAAATACTCGTCGCATGATTGAAAAAAAATCTAACGCACGAT ACTTTTGAAAAACGGCTTTTAACCACATAATTAAACCATTGGTTGACGAG TTGTAAGAGTGCTGAACTTGCATCGCGATAAAAATTGCAAGGCGTGCACC GGGGAGAGATGGGAAGATCCTTTGTGACCATAAGCAGGATGGTAATTAGA GGTCCATCGGCTGTAAGTGTGATCTTTCCGGCCGTCATGCGCTACTCGCA ATTCATGTCATGTACTACCTGGTATTATAGTCTATACTGTGATGACTCTC GACGGGGAACCAGCAACTCTCTCGTTTTTCTCTTCACACGCTCAAGCGTT TTTTCTTCCAGCGGAGGAGAGGGGCAACGATGCTGGCATTTGGAGAAAAA AATGAAGGCACCTGCGTCCCCCTACGTGAAGAACAACGCCCTTTGCTGTC CGTTTTGCTCAACTGCCACGGGGGGAAACCAACAATGAATCCCCTTGTTT GTCAATAAATCCGTTTGGTGTTCATCGGGTGTATATAAACATCTTCCGTA TCTCGCCGTCGTGTATGCGTGTGGGCGTTTTGGGCTTTATATGTGCTCAC CGCCCAATCTGGACGGACTAGCTTGTAATACCAGACGAGTCACCGTCCCG CGAGCGACCGGAAGAAGAGATGGTGCCCCAGCGGCTCGGAGCGCTGGATA AGGTCTCGTTGGAGATCGACGAGGGGATGGAGCTTGAGAGGGAAAAACAG GTACGATAGTTGCTTCTATTAATAATTACATCGATTGATAATAAGCCTAT TCTCGGACGGATCCCAGAGCGCCATCGTCGAAGTAGGCCCATATCCGCTC GAGGCACATGAAGTAGTTGACGATCAGTTACTAGAGTGATTTTAATGCTT AGCTAGCTCCTGTAGCTTTCCCCCCCACCCCGCTCTGTGCAACAGGAAGC GAAACTGTACATTGATCTCCAAAGGCTTCGTGTGCAGCTGACATCGACGA GACTTTTATGTTTGTAAGGGGTTGGAAAAACCTGGAGTCCTTCTTGTAAA ATGTTCAATCATATGCACGTGTCTCCGTGTTTTATGTCGAAGTATCGCGT GGTACCGTGAACTGCAGCTGGCGCGCAGCTGTGCCTCGCCTCCCGCGGTC CCTTCTGATAAATACTCTGTAGCTTCTGCCTGCTTCTGCAGGACTTGTGT CGGCAACACTCGTAGATATTTCAATATTTTAGCTTGGCATCTCTGGATGG CAAGATCCTTCGGAGAGCAACGGCGAGCTCCACCCGTTGCGTGGGGGGTC CTTGAAAGCGACGAGATCCTTCCGCGTACGTTGACGAGCTGTCGATACCG CTCTGTTGATTCTTCGACACCAACGAGCTGCTCGCGGCGGGCATTAGAGA GCTCTGTCTCCGTACCGCTGTGAGAGTCCCTTAGAGCGGAAAATCTCTTG CGGCAAAAACCGTCCACGTCGTGTCGGAGAGGCCTCGCATTATCTGCGTG AAAGCCATTTCAAGAGGGCCTGCAACTATTGGCCCGTACTGTGACGCATA TAAAAATATACTGTACATAGTACAACACTTTTTTCATACGGTTCAGTGGA CTTCAATCCATGGGAAGATTTTAGATGACCGCATATCCCGGCATTGCGAA ACTGTTTAAAGAATAACGGCGACTAACAGCTTCGCCATTTTGCGGGCTCT ACAGCGTGTCGCTAGCTAGTCTTTGCCGAGGTGTGATGGCAAGGTGCGGA TGAACCTCCCATCAGCTCACGACGCTGCCACAGAGCAGTAACGTCGTGGC GGCGAGGAGGAAAGGAGAGGAGAGGAAGGGTTTTGAGCCGCTTAACGCTT GCGGGGTTCTGAAAATAGTCCCCACTCGGCTGTTTCCTTCGCGATGGCGT CCCCAAATCTGAGCAGTTAAAAAGAAGAAGTCAAGTGTGAGCCTCCATAA GCTCTCGGGGTTGAACATGCCAGACGTCACCAGTGTCGAGTAGGGTTACA ACAGCAGCGGCAGTCTCAACAGCAGACTCAATAAGAGCCTTATTAGCAGC CTCACCAACAGCAACACTCTCACTCCTGTTGGGGCTATAACATAACTAAA AAAATGTTTACCTGAAGACAAAGAGGGGTGCCCGTAGTTCACAAGCTTAC GATATAACAGTTACTGCGCTAACAATATCACGAGCGGCTAGCATGAGCTG CTCTATCTTCCTGCTTGAATTCTCCCCCGAGCTCTTCCCTCTTATCACCC GAAGTATCCCTCAATCGCCTGCTGCTGATGCCCGCACCTTGTACGTATCC GTATGCAGGTTAGGGAGAAAACGGCGCGCTCGAACGCTGTGGTTCTTGAA ATGATCGGAGATCTTCCCGACGCAGACATGAAGCCACCTGAGAATGTGCT TTTCGTCTGCAAGCTTAATCCCGTCACCACCGACGATGATTTGGAGATCA TTTTCACCAGGTGAGAGCCATTGTGTCGGTTTCAAGGAGGAGCCGGGTCA CTAAATCATGTCGTATCCATTAGATTACATTAGTTTGTCTCTCCATCTCT CAGCGATGCGATCTTGAGGCGTTCCACTCTGGTTTCCACCCCCTCACCTC CTCTTTGTCAGATTTGGCAACTGCCGCGCCGAGATCATCAGGGACCACAT CACGGGAGAGAGTTTGAACTACTCCTTTGTAGAGTTTGATGCTGTGGAGT CCTGCGAGGAGGTAACTGAACATCATCATGCTTTACCTTGCTCAGAGAAT AGGGTAAGAGGTTCGATCTGCAGCAGGTGTCGTGATTTGTGCGGGGGCGT TATTGGGCTGTAATAGAGCCGCGTGTTCGCGTTGAGTTGGTCATAACTTC TGTGAGACTCTGGTGACGGTGAGCGATGCGATCAAGTGGTTTCTCCCCCA CCGTTTGCTTATGACCCGTATTTCCCGTGCCGCGACAACGTCTGCTGCAT AGGCGTACAAAAAGATGCACAACGTGCTTATTGACGATCGCCGGATCCGA GTGGACTTCAGCCAGTCTGTCGCGAAAGAATGGTGAGTGAATCTTTCATG CTTTCCGAAATAGCGCGGATACGAACTGTGACTGTGCTGTTGTATTTAGT GCCGTCGCCGTAACACATGGCGCAACCCTACGTTGGTCGAGACTAAGTGG CGTAAAGTATTTTTCCGTCTCTCCGGGTCCAACCCGTAGTTAAAGCATCG GCCGCTACTTTCAAACGAATGCTACTCTTTTTGGTACATATTACTCAGAC GTTCTGGTTTTATTAAATTCGCCCCGATATCCCTAGGTCCAAGTACAAAG GGAGGGCGCAGGGGGGGCAGAAACTCGCCAGTGGTAAGGGAAGCAAAACA ATCCAACAGCAACACTTCGGCGGTAAGGACCCCGCAGGTGCAGGAAAGCC GACACCGATTGCGGCTATCAAAAGTGATGTTGGCAGTCAGCGCAGGAGCA AGTGGAACAACGCGCCGAGCTCAATGCCCGGGCCTACTGCATTGCCTGCA AGGGGAGGCGGGTCTCGGGGCGACGCATCGCGTGAGCGTGCACGAGATGA GGACAAGACGAAGAGAGGCTCAAGGTGGGGCGATGGTGTATCGGAGGATA GCGTTGCGGGTAGCGGCAGGGACCGCGGAGATGGGCGTGGTGTAGACGAT CGACTTGATCCTCTTCGGCGCGGCGAAGAACGGCCGACCAGCAACAGACA GAAAGACGGGACACGGGAGCGCGTGAGAGAGACGGGTAGCATAAGAGATG GAAATGACGAAAGAAGATCACGGGCGGGAGATGAACAAGGTCGAGGACGG CATGAAAGGCATGCGCGAAAAGATTCCCGAGATGAAGGAAGGAAGGGTGG CCGGCATGGTAAGAATGCGCGGGAAAAGAGTGGCAGCGATAGCCCAAGAC ACGACGATTACGGTCGCGATGATACCTACGGCGGCAAAAACCGCGCTGAT AACAGCTACAGGAAAGGAGAACAACGGGTGCGCCACGATAGAACTTGGCG TAGTAGGAGCAGGAGTCGTGAACGGGGGCAAGAGAAGGGTAGTGACCGTG GCCATAGCCGTAGACGGTAA
back to top

Coding sequence (CDS) from alignment at F-distichus_contig10564:2197..8366-

>mRNA_F-distichus_contig10564.481.1 ID=mRNA_F-distichus_contig10564.481.1|Name=mRNA_F-distichus_contig10564.481.1|organism=Fucus distichus monoicous|type=CDS|length=3534bp|location=Sequence derived from alignment at F-distichus_contig10564:2197..8366- (Fucus distichus monoicous)
ATGTCTGTGATGATCGAAACGTCGCTTGGAGACCTGGTGATCGACCTGTT
CTGCAAAGAGGCTCCATTGGCGACGAAGAACTTTATCAAGCTTTGCAAAA
TCAAATGTCTGTGATGATCGAAACGTCGCTTGGAGACCTGGTGATCGACC
TGTTCTGCAAAGAGGCTCCATTGGCGACGAAGAACTTTATCAAGCTTTGC
AAAATCAAGTACTACAACGGCTGCCTTTTCTACAACGTCCAGCAAAACTT
CATGATTCAAACGGGAGATCCCACGGCCACCGGAAAGGGCGGAACATCCC
TGTATGGCCTCATCTACGGCGATCAAGCACGGTACTACAACGGCTGCCTT
TTCTACAACGTCCAGCAAAACTTCATGATTCAAACGGGAGATCCCACGGC
CACCGGAAAGGGCGGAACATCCCTGTATGGCCTCATCTACGGCGATCAAG
CACGTTTTTTCGAGGACGAGTTCGGAGCGACGACCCGAAAGCATGACGAG
GCTGGTCTGGTTTCAATGGCGAACATGGGCGTCCCGGACTCTAACGGTTC
GCAGTTCTTCTTTTCCATGCGGGGCGAAGACATGCAGCACCTGGACGGCA
AACACACCATCTTTGCCAAGTTTTTTCGAGGACGAGTTCGGAGCGACGAC
CCGAAAGCATGACGAGGCTGGTCTGGTTTCAATGGCGAACATGGGCGTCC
CGGACTCTAACGGTTCGCAGTTCTTCTTTTCCATGCGGGGCGAAGACATG
CAGCACCTGGACGGCAAACACACCATCTTTGCCAAGGTCATGGAAGGCAT
GGACACCCTCGAGGCAATTAACGGGCAATTCTGCGATGACAACGGGCGCC
CCTACCGTGACTTACGCATCCTTCACACCTATGTCTTGGACGACCCTTTC
GAAGATCCTCCACAGGTCATGGAAGGCATGGACACCCTCGAGGCAATTAA
CGGGCAATTCTGCGATGACAACGGGCGCCCCTACCGTGACTTACGCATCC
TTCACACCTATGTCTTGGACGACCCTTTCGAAGATCCTCCACAGCTTGTA
ATACCAGACGAGTCACCGTCCCGCGAGCGACCGGAAGAAGAGATGGTGCC
CCAGCGGCTCGGAGCGCTGGATAAGGTCTCGTTGGAGATCGACGAGGGGA
TGGAGCTTGAGAGGGAAAAACAGCTTGTAATACCAGACGAGTCACCGTCC
CGCGAGCGACCGGAAGAAGAGATGGTGCCCCAGCGGCTCGGAGCGCTGGA
TAAGGTCTCGTTGGAGATCGACGAGGGGATGGAGCTTGAGAGGGAAAAAC
AGGTTAGGGAGAAAACGGCGCGCTCGAACGCTGTGGTTCTTGAAATGATC
GGAGATCTTCCCGACGCAGACATGAAGCCACCTGAGAATGTGCTTTTCGT
CTGCAAGCTTAATCCCGTCACCACCGACGATGATTTGGAGATCATTTTCA
CCAGGTTAGGGAGAAAACGGCGCGCTCGAACGCTGTGGTTCTTGAAATGA
TCGGAGATCTTCCCGACGCAGACATGAAGCCACCTGAGAATGTGCTTTTC
GTCTGCAAGCTTAATCCCGTCACCACCGACGATGATTTGGAGATCATTTT
CACCAGATTTGGCAACTGCCGCGCCGAGATCATCAGGGACCACATCACGG
GAGAGAGTTTGAACTACTCCTTTGTAGAGTTTGATGCTGTGGAGTCCTGC
GAGGAGATTTGGCAACTGCCGCGCCGAGATCATCAGGGACCACATCACGG
GAGAGAGTTTGAACTACTCCTTTGTAGAGTTTGATGCTGTGGAGTCCTGC
GAGGAGGCGTACAAAAAGATGCACAACGTGCTTATTGACGATCGCCGGAT
CCGAGTGGACTTCAGCCAGTCTGTCGCGAAAGAATGGCGTACAAAAAGAT
GCACAACGTGCTTATTGACGATCGCCGGATCCGAGTGGACTTCAGCCAGT
CTGTCGCGAAAGAATGGTCCAAGTACAAAGGGAGGGCGCAGGGGGGGCAG
AAACTCGCCAGTGGTAAGGGAAGCAAAACAATCCAACAGCAACACTTCGG
CGGTAAGGACCCCGCAGGTGCAGGAAAGCCGACACCGATTGCGGCTATCA
AAAGTGATGTTGGCAGTCAGCGCAGGAGCAAGTGGAACAACGCGCCGAGC
TCAATGCCCGGGCCTACTGCATTGCCTGCAAGGGGAGGCGGGTCTCGGGG
CGACGCATCGCGTGAGCGTGCACGAGATGAGGACAAGACGAAGAGAGGCT
CAAGGTGGGGCGATGGTGTATCGGAGGATAGCGTTGCGGGTAGCGGCAGG
GACCGCGGAGATGGGCGTGGTGTAGACGATCGACTTGATCCTCTTCGGCG
CGGCGAAGAACGGCCGACCAGCAACAGACAGAAAGACGGGACACGGGAGC
GCGTGAGAGAGACGGGTAGCATAAGAGATGGAAATGACGAAAGAAGATCA
CGGGCGGGAGATGAACAAGGTCGAGGACGGCATGAAAGGCATGCGCGAAA
AGATTCCCGAGATGAAGGAAGGAAGGGTGGCCGGCATGGTAAGAATGCGC
GGGAAAAGAGTGGCAGCGATAGCCCAAGACACGACGATTACGGTCGCGAT
GATACCTACGGCGGCAAAAACCGCGCTGATAACAGCTACAGGAAAGGAGA
ACAACGGGTGCGCCACGATAGAACTTGGCGTAGTAGGAGCAGGAGTCGTG
AACGGGGGCAAGAGAAGGGTAGTGACCGTGGCCATAGCCGTAGACGGTAA
GTCCAAGTACAAAGGGAGGGCGCAGGGGGGGCAGAAACTCGCCAGTGGTA
AGGGAAGCAAAACAATCCAACAGCAACACTTCGGCGGTAAGGACCCCGCA
GGTGCAGGAAAGCCGACACCGATTGCGGCTATCAAAAGTGATGTTGGCAG
TCAGCGCAGGAGCAAGTGGAACAACGCGCCGAGCTCAATGCCCGGGCCTA
CTGCATTGCCTGCAAGGGGAGGCGGGTCTCGGGGCGACGCATCGCGTGAG
CGTGCACGAGATGAGGACAAGACGAAGAGAGGCTCAAGGTGGGGCGATGG
TGTATCGGAGGATAGCGTTGCGGGTAGCGGCAGGGACCGCGGAGATGGGC
GTGGTGTAGACGATCGACTTGATCCTCTTCGGCGCGGCGAAGAACGGCCG
ACCAGCAACAGACAGAAAGACGGGACACGGGAGCGCGTGAGAGAGACGGG
TAGCATAAGAGATGGAAATGACGAAAGAAGATCACGGGCGGGAGATGAAC
AAGGTCGAGGACGGCATGAAAGGCATGCGCGAAAAGATTCCCGAGATGAA
GGAAGGAAGGGTGGCCGGCATGGTAAGAATGCGCGGGAAAAGAGTGGCAG
CGATAGCCCAAGACACGACGATTACGGTCGCGATGATACCTACGGCGGCA
AAAACCGCGCTGATAACAGCTACAGGAAAGGAGAACAACGGGTGCGCCAC
GATAGAACTTGGCGTAGTAGGAGCAGGAGTCGTGAACGGGGGCAAGAGAA
GGGTAGTGACCGTGGCCATAGCCGTAGACGGTAA
back to top