mRNA_F-distichus_contig10556.479.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10556.479.1 vs. uniprot
Match: D7FL27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL27_ECTSI) HSP 1 Score: 400 bits (1028), Expect = 3.400e-128 Identity = 188/244 (77.05%), Postives = 217/244 (88.93%), Query Frame = 3
Query: 588 MGSQIPPESPKSGATRKGQWTLKYKQIKCRFCGGKLCLRCSERCALRCKGAAINGLHSSWITDSIIAMQRPSSRLMTTYDVIGQFKRKGITAVFNLTEAGEHPFCGDGLEQSSGFPYLPETFMREGILFFNFAWEDMTTPPLSLLMDIVRVAVGCLRNKGKIAVHCHAGYGRTGLVIASVIVMAENLTAQQAVALVRKKRPLSVQTDAQVAIVGAFADFVRGVRVVYHFTDHARVTLGQHLSQQ 1319
MGSQ+ +P +G TRKGQWT K Q KCRFCGG+LCLRCSE+CALRCKGAA+NGLHS WI+DSII MQRPSSRL+ TYD++GQFKRKG+TA+FNLTE GEHP CGDGLE++SGFPYLPETFMREGI +NF+WEDMTTP ++LL DI+RVA+ CLR GKIAVHCHAGYGRTGLVIAS++VM NL QQAVALVR+KRP S+QT+AQV++VG FA+FVRGVRVVYHFTDHARVTLGQHL+QQ
Sbjct: 182 MGSQVSKAAPAAGGTRKGQWTFK-NQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWISDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKASGFPYLPETFMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGGKIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVALVREKRPTSLQTNAQVSMVGEFANFVRGVRVVYHFTDHARVTLGQHLAQQ 424
BLAST of mRNA_F-distichus_contig10556.479.1 vs. uniprot
Match: A0A835ZAS9_9STRA (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS9_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.820e-69 Identity = 144/303 (47.52%), Postives = 175/303 (57.76%), Query Frame = 3
Query: 822 YDVIGQFKRKGITAVFNLTEAGEHPFCGDGLEQSSGFPYLPETFMREGILFFNFAWEDMTTPPLSLLMDIVRVAVGCLRNKGKIAVHCHAGYGRTGLVIASVIVMAENLTAQQAVALVR----------------------------KKRPLSVQTDAQVAIVGAFADFVRGVRVVYHFTDHARVTLGQHLSQQAFLLHGQESVTLRWLPKPVALATRMLTSLSREK-PMDVARALANVETVSFDESRGIEA----------------APVWGMVQEKHLRSMQYASNGNDWGHWEQLVQRCE 1595
Y ++ +FK GIT V NLTE GEHP CGDGLE SSGFPYLPET M GI F NFAWEDMTTPPL+LL +IVRV V + GK AVHCHAGYGRTGLVIAS +V ++NLTA +AVA+VR +KRP SVQT AQ IV FA+FVR RVVYHF++HA VTLGQ+L QQ+FLL G LRW+P+P+ALA RML +LS V RA+A + +A A ++ + +++ A+N W W CE
Sbjct: 46 YGLMDKFKAAGITVVLNLTEPGEHPHCGDGLEASSGFPYLPETLMAAGIQFVNFAWEDMTTPPLALLANIVRVLVSHVGLGGKAAVHCHAGYGRTGLVIASSLVYSQNLTADEAVAIVRSILVRVSSALSRPNECMRTCVIGHSAPSRKRPGSVQTPAQQDIVARFAEFVRETRVVYHFSEHATVTLGQYLQQQSFLL-GPGDTALRWVPRPIALAARMLQALSAGLGAAAVLRAIAAAPHAAPGRRTSADAGXXXXXXXXXXXXXXXAAATLSAVDRRVLALKLAANAQGWAAWRNAAAACE 347
BLAST of mRNA_F-distichus_contig10556.479.1 vs. uniprot
Match: A0A024G075_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G075_9STRA) HSP 1 Score: 235 bits (599), Expect = 9.480e-67 Identity = 124/242 (51.24%), Postives = 154/242 (63.64%), Query Frame = 3
Query: 621 SGATRKGQWTLKYKQIKCRFCGGKLCLRCSERCALRCKGAAINGLHSSWITDSIIAMQRPSSRLMTTYDVIGQFKRKGITAVFNLTEAGEHPFCGDGLEQSSGFPYLPET-FMREGILFFNFAWEDMTTPPLSLLMDIVRVAVGCLRN-KGKIAVHCHAGYGRTGLVIASVIVMAENLTAQQAVALVRKKRPLSVQTDAQVAIVGAFADFVRGVRVVYHFTD-HARVTLGQHLSQQAFLLHG 1337
S R W K IKCRFCGG C RCSE AL + I GLH+ WITD I+ M RPSSRL+ Y + QF R ITAVFNLT GEHPFCGDGL SSGFPY PE FM + I F+NF WEDMT PPLSL+MDIV+V L++ K+AVHCHAGYGRTGL IA V++ ++ ++A+ +VR+ RP S+QT Q V F +++ +V + H T+ Q + QQ L+HG
Sbjct: 2 SSPVRARDWEQKLT-IKCRFCGGPQCKRCSENAALAKTDSPIPGLHADWITDRILGMMRPSSRLIKQYQITDQFHRHHITAVFNLTIPGEHPFCGDGLG-SSGFPYDPENDFMAQKIQFYNFGWEDMTVPPLSLMMDIVKVMTSMLQDGMQKVAVHCHAGYGRTGLAIACVLLFMHGISPERAIHIVRRDRPGSIQTSGQATFVHEFCEYMNSAKVTFALPFIHEPFTIAQAIEQQNRLMHG 241
BLAST of mRNA_F-distichus_contig10556.479.1 vs. uniprot
Match: K3WRR2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRR2_GLOUD) HSP 1 Score: 234 bits (596), Expect = 3.700e-65 Identity = 131/308 (42.53%), Postives = 183/308 (59.42%), Query Frame = 3
Query: 624 GATRKGQWTLKYKQIKCRFCGGKLCLRCSERCALRCKGAAINGLHSSWITDSIIAMQRPSSRLMTTYDVIGQFKRKGITAVFNLTEAGEHPFCGDGLEQSSGFPYLPET-FMREGILFFNFAWEDMTTPPLSLLMDIVRVAVGCLRN-KGKIAVHCHAGYGRTGLVIASVIVMAENLTAQQAVALVRKKRPLSVQTDAQVAIVGAFADFVRGVRVVYHFTD-HARVTLGQHLSQQAFLLHGQESVTLRW-LPKPVALATRMLTSLSREKPMDVARALANVETVSFDESRGIEAAPVWGMVQEKHLRSM 1535
G+ K + K +KCR CGG C RCSE AL + + GLH+ W+T+ I+ M RPSSRLM Y + QF++ I+AVFNLT GEHP+CGDGL +SGFPY PE M E I F+NF WEDMTTP L +MDIV+V L++ KI+VHCHAGYGRTGL IA V++ N+ +QA+ +VR+ RP S+QT AQ V +F +++ +VV+ H T+ + + Q ++HG++S R LPK + + + P V N + F++ G +AA + +QE HLR +
Sbjct: 2 GSPVKAREWEKTLTVKCRLCGGAKCKRCSESAALAKTNSPVLGLHADWVTNRILGMMRPSSRLMKDYQIAQQFQKLRISAVFNLTLPGEHPYCGDGLA-ASGFPYDPEKDLMVENIHFYNFGWEDMTTPTLPFMMDIVKVMASILQDGHQKISVHCHAGYGRTGLAIACVLIFMHNIPPEQAIKIVRRDRPGSIQTSAQAKFVRSFHEYINTSKVVFALPYIHDHFTIAEMIEHQNRMVHGEKSSGTRVALPKILDFLCNEIEQAAEVHPAQVIHGFVN--HIPFNQIEG-KAADNYHSIQESHLRGV 305
BLAST of mRNA_F-distichus_contig10556.479.1 vs. uniprot
Match: A0A1V9Z9Y6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z9Y6_9STRA) HSP 1 Score: 224 bits (570), Expect = 2.090e-63 Identity = 121/239 (50.63%), Postives = 150/239 (62.76%), Query Frame = 3
Query: 666 IKCRFCGGKLCLRCSERCALRCKGAAINGLHSSWITDSIIAMQRPSSRLMTTYDVIGQFKRKGITAVFNLTEAGEHPFCGDGLEQSSGFPYLPET-FMREGILFFNFAWEDMTTPPLSLLMDIVRVAVGCLRNKGKIAVHCHAGYGRTGLVIASVIVMAENLTAQQAVALVRKKRPLSVQTDAQVAIVGAFADFVRGVRVVYHF-TDHARVTLGQHLSQQAFLLHGQESVTLRWLPKPV 1376
IKCRFCGG C RCSE AL + I GLH+ W+TDSI+ M RPS+RLM TY + QF R I AVFNLT GEHP CGDG SGFPY PET M + I F+NF WEDMT+P + L++DI V L K+AVHCHAGYGRTGL IA +V ++AQ+A+ +VR+ RP S+QT QVA VG F D +R ++V+ T H R +L L ++ H S T LP +
Sbjct: 14 IKCRFCGGPKCKRCSEYAALLKIDSPIKGLHADWVTDSILGMMRPSTRLMQTYRIAEQFTRLKIKAVFNLTIPGEHPHCGDG-NGPSGFPYDPETDLMAQKIEFYNFGWEDMTSPNVVLMLDITTVMASVLAQGYKVAVHCHAGYGRTGLAIACTLVFQHGISAQEAIQIVRRGRPGSIQTHGQVAFVGRFHDHLRQSKLVFAIPTIHDRFSLQIALERERQQFHATPSSTSMVLPPKI 251
BLAST of mRNA_F-distichus_contig10556.479.1 vs. uniprot
Match: F0W109_9STRA (Uncharacterized protein AlNc14C5G789 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W109_9STRA) HSP 1 Score: 225 bits (574), Expect = 5.980e-63 Identity = 123/257 (47.86%), Postives = 156/257 (60.70%), Query Frame = 3
Query: 621 SGATRKGQWTLKYKQIKCRFCGGKLCLRCSERCALRCKGAAINGLHSSWITDSIIAMQRPSSRLMTTYDVIGQFKRKGITAVFNLTEAGEHPFCGDGLEQSSGFPYLPET-FMREGILFFNFAWEDMTTPPLSLLMDIVRVAVGCLR----------------NKGKIAVHCHAGYGRTGLVIASVIVMAENLTAQQAVALVRKKRPLSVQTDAQVAIVGAFADFVRGVRVVYHFTD-HARVTLGQHLSQQAFLLHG 1337
S R +W K IKCRFCGG C RCSE AL + I+GLH+ W+TD I+ M RPSSRL+ Y +I QF R ITAVFNLT GEHPFCGDGL SSGFPY PE FM + I F+NF WEDMT P LSL+MDIV+V L+ N ++AVHCHAGYGRTGL IA ++ ++ ++A+ +VR+ RP S+QT +Q V F +++ R+ + H TL Q + QQ L+HG
Sbjct: 2 SSPVRAREWEQKLT-IKCRFCGGPQCKRCSEHAALAKIDSPISGLHADWVTDRILGMMRPSSRLIKQYHIIDQFHRHRITAVFNLTIPGEHPFCGDGLG-SSGFPYDPEIDFMAQKIQFYNFGWEDMTVPTLSLMMDIVKVMTSMLQDGMQKVGAVFIPSKVLNFCQVAVHCHAGYGRTGLAIACALIFMHGISPERAIHIVRRDRPGSIQTPSQAIFVREFCEYMSCARLTFALPFIHEPFTLSQAIEQQNRLIHG 256
BLAST of mRNA_F-distichus_contig10556.479.1 vs. uniprot
Match: A0A6A3FGH6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FGH6_9STRA) HSP 1 Score: 223 bits (568), Expect = 7.130e-63 Identity = 119/245 (48.57%), Postives = 151/245 (61.63%), Query Frame = 3
Query: 624 GATRKGQWTLKYKQIKCRFCGGKLCLRCSERCALRCKGAAINGLHSSWITDSIIAMQRPSSRLMTTYDVIGQFKRKGITAVFNLTEAGEHPFCGDGLEQSSGFPYLPET-FMREGILFFNFAWEDMTTPPLSLLMDIVRVAVGCL-RNKGKIAVHCHAGYGRTGLVIASVIVMAENLTAQQAVALVRKKRPLSVQTDAQVAIVGAFADFVRGVRVVYHFTD-HARVTLGQHLSQQAFLLHGQESV 1349
G+ K + K ++KCR CGG C RCSE AL + + GLHS W+ D +AM RPSSRLM Y + QF++ ITAVFNLT GEHP+CGDGL S GFPY PE M + I F+NF WEDMTTP LS +MDIV+V L ++AVHCHAGYGRTG+ IA ++ N+ + A+ LVR+ RP SVQT QV V F ++ RVV+ H R TL + + Q LHG+ +V
Sbjct: 2 GSPVKAREWEKTLKVKCRLCGGARCKRCSESAALAKSDSPVRGLHSDWVADYALAMMRPSSRLMNEYKIAEQFQKLNITAVFNLTLPGEHPYCGDGLGPS-GFPYDPEKDLMAQNIRFYNFGWEDMTTPTLSFMMDIVKVIASVLLTGHHRVAVHCHAGYGRTGITIACALIFLHNIPPELAIRLVRRDRPGSVQTAGQVQFVHDFHAYLNAARVVFALPKVHDRFTLAETVEHQNRRLHGEGAV 245
BLAST of mRNA_F-distichus_contig10556.479.1 vs. uniprot
Match: T0RW77_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RW77_SAPDV) HSP 1 Score: 225 bits (573), Expect = 8.340e-63 Identity = 121/240 (50.42%), Postives = 151/240 (62.92%), Query Frame = 3
Query: 666 IKCRFCGGKLCLRCSERCALRCKGAAINGLHSSWITDSIIAMQRPSSRLMTTYDVIGQFKRKGITAVFNLTEAGEHPFCGDGLEQSSGFPYLPET-FMREGILFFNFAWEDMTTPPLSLLMDIVRVAVGCLRN-KGKIAVHCHAGYGRTGLVIASVIVMAENLTAQQAVALVRKKRPLSVQTDAQVAIVGAFADFVRGVRVVYHF-TDHARVTLGQHLSQQAFLLHGQESVTLRWLPKPV 1376
IKCRFCGG C RCSE AL + + GLH+ W+TDSI+ M RPSSRLM TY + QF+R I AVFNLT GEHP CGDG SGFPY PE M I F+NF WEDMT+P LSL++DI V L + K+AVHCHAGYGRTGL IA ++ ++A +A+A+VR+ RP S+QT QVA VG F D++R ++V+ T H R +L L ++ F T LP V
Sbjct: 29 IKCRFCGGPKCKRCSEHAALLKTDSPVAGLHADWVTDSILGMMRPSSRLMQTYRIADQFQRLKIKAVFNLTMPGEHPHCGDG-NGPSGFPYDPEMDLMAHQIQFYNFGWEDMTSPNLSLMLDIATVMASVLAQAQQKVAVHCHAGYGRTGLAIACTLIFQHGISAAEAIAIVRRGRPGSIQTHGQVAFVGRFHDYLRQAKLVFALPTIHDRFSLSTILERERFQFQPTPPETSMVLPPRV 267
BLAST of mRNA_F-distichus_contig10556.479.1 vs. uniprot
Match: A0A0P1ABQ2_PLAHL (Protein tyrosine phosphatase domain-containing protein 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ABQ2_PLAHL) HSP 1 Score: 227 bits (579), Expect = 1.230e-62 Identity = 115/231 (49.78%), Postives = 150/231 (64.94%), Query Frame = 3
Query: 666 IKCRFCGGKLCLRCSERCALRCKGAAINGLHSSWITDSIIAMQRPSSRLMTTYDVIGQFKRKGITAVFNLTEAGEHPFCGDGLEQSSGFPYLPET-FMREGILFFNFAWEDMTTPPLSLLMDIVRVAVGCL-RNKGKIAVHCHAGYGRTGLVIASVIVMAENLTAQQAVALVRKKRPLSVQTDAQVAIVGAFADFVRGVRVVYHFTD-HARVTLGQHLSQQAFLLHGQESV 1349
+KCR CGG C RCSE AL + + GLH+ W+ D +AM RPSSRLM Y+++ QF ITAVFNLT GEHP+CGDGL +SGFPY PE M I F+NF WEDMTTP LSL+MDIV+V L + +IAVHCHAGYGRTG+ IA ++ N++A+ A+ LVR+ RP S+QT QV V F ++ R+V+ H + TL + + Q LHG+++V
Sbjct: 17 VKCRLCGGARCKRCSESAALAKVDSPVKGLHADWVADCALAMMRPSSRLMNEYNIVQQFHLLNITAVFNLTLPGEHPYCGDGLG-TSGFPYDPEKDLMARNIQFYNFGWEDMTTPTLSLMMDIVKVIASVLLKGHHRIAVHCHAGYGRTGITIACALIFLHNISAELAIRLVRRDRPGSIQTSGQVQFVHDFHTYINAARIVFALPKIHDQFTLAETIEHQNRRLHGEDAV 246
BLAST of mRNA_F-distichus_contig10556.479.1 vs. uniprot
Match: D0MYX7_PHYIT (Uncharacterized protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0MYX7_PHYIT) HSP 1 Score: 225 bits (573), Expect = 5.690e-62 Identity = 120/245 (48.98%), Postives = 153/245 (62.45%), Query Frame = 3
Query: 624 GATRKGQWTLKYKQIKCRFCGGKLCLRCSERCALRCKGAAINGLHSSWITDSIIAMQRPSSRLMTTYDVIGQFKRKGITAVFNLTEAGEHPFCGDGLEQSSGFPYLPET-FMREGILFFNFAWEDMTTPPLSLLMDIVRVAVGCL-RNKGKIAVHCHAGYGRTGLVIASVIVMAENLTAQQAVALVRKKRPLSVQTDAQVAIVGAFADFVRGVRVVYHF-TDHARVTLGQHLSQQAFLLHGQESV 1349
G+ K + K ++KCR CGG C RCSE AL + + + GLH+ W+ D +AM RPSSRLM Y + QF + ITAVFNLT GEHP+CGDGL +SGFPY PE M E I F+NF WEDMTTP L+ +MDIV+V L + K+AVHCHAGYGRTG+ IA ++ N+ + A+ LVR+ RP SVQT QV V F ++ RVV+ T H R TL + + Q LHG +V
Sbjct: 2 GSPVKAREWEKTLKVKCRLCGGLRCKRCSESAALAKQDSPVKGLHADWVADCALAMMRPSSRLMNEYKIAEQFHKLNITAVFNLTLPGEHPYCGDGLG-TSGFPYDPEKDLMAENIRFYNFGWEDMTTPALAFMMDIVKVIASVLLTGRHKVAVHCHAGYGRTGIAIACALIFLHNIPPELAIRLVRRDRPGSVQTAGQVQFVHDFHAYLNAARVVFALPTIHDRFTLAETVEHQNRRLHGAGAV 245 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10556.479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10556.479.1 >prot_F-distichus_contig10556.479.1 ID=prot_F-distichus_contig10556.479.1|Name=mRNA_F-distichus_contig10556.479.1|organism=Fucus distichus monoicous|type=polypeptide|length=500bp MDDELPNTMEIQSSAATLDTPPSEYHVASIGTSMRVATERPSRRPSAPVIback to top mRNA from alignment at F-distichus_contig10556:6051..10743+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10556.479.1 ID=mRNA_F-distichus_contig10556.479.1|Name=mRNA_F-distichus_contig10556.479.1|organism=Fucus distichus monoicous|type=mRNA|length=4693bp|location=Sequence derived from alignment at F-distichus_contig10556:6051..10743+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10556:6051..10743+ >mRNA_F-distichus_contig10556.479.1 ID=mRNA_F-distichus_contig10556.479.1|Name=mRNA_F-distichus_contig10556.479.1|organism=Fucus distichus monoicous|type=CDS|length=3000bp|location=Sequence derived from alignment at F-distichus_contig10556:6051..10743+ (Fucus distichus monoicous)back to top |