mRNA_F-distichus_contig1055.476.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig1055.476.1 vs. uniprot
Match: D8LLH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH8_ECTSI) HSP 1 Score: 720 bits (1859), Expect = 1.130e-221 Identity = 652/1739 (37.49%), Postives = 846/1739 (48.65%), Query Frame = 2
Query: 116 QILTIVQVESWSSFEHSELELVERGILDEAAELF---------------------------------------------AEIVTSRRAEGQRIHQLLEGATACLDSPSTGAWVQVLGELQRQTQVLENDVISRCEAVRERESESFLEAPPRAIAFLQRLASRVGHSDDQWAIPSSIEPTPAARGTRVRNTASRQSGA---SRDKTKTVHMAVS-PPESLACPASSHSSAALAGNGHFSGRTGGADRRRK--YGFSG-------GSVSKSQQQQGLRAPLPAIAKDQGLQ-MAGGGRVE----------LEPALNATQDRTE-LSDEDASVMKVMKPPAPSEQPRRPMPRPRPVQPSTQGGRSARGKG-------------AVQASTSAHQTTTMTSAANFLLAR-------GKPLDFELSTATL----SEEHADGTAEGPGLDEWGTL---EARRSVSDGVID---------RSSYPSEDAP-------YGLRTRGSLD-SPESPGEADDNLSR--ESREIGPRSASAAQLPLALQQQARGRRGPDCPPPMSRRMPRTADCTQAAADIGLASTFEKR-QTDLRKDNDDGRTVDHQDRAAGT-----KDGYDGQCE-----------SLEATRRLLLEASSVKRLLESMDRTDVSTADADEGLEDEVPDRFLAKLGLVEFKPLAQKLAMALDRAPEGLFADPSLCVAEPRTIRALRNQVAALGKEITRRAETCAEARKLNASLRRLIEVARRTRAKNLDTVDVACRKLIAGSVEEAEVLQESWGVAREAERYHEALTRLQEQVESTTAKTQQIVSSSEALARLLHDEMERQDEELSQRRHVAEDGLAEWEQAAEDDPALRARRRLYDCEILVLSHRMAGGGANRTSLAIAFYSLRERTERQRRARQWFSEAKGRRDAHLTRAAFDALAHGSRLKAVVAAAAVGRCRPGFAAWRKETALTRRLRGFRWARDRVMAAAGLRRWRQRVGKRKFGNG---------WGIEVVEGEEVLEQRLSFFRERRAKRVVLRAWHGAVQAA---TVVEMRAESGARRSVGRSGRGRRQFSWPARRCGGILDRDEVSLHWNRGARLRNTEALARRLRFETQGRHAFRWWWRQCRSAVLGKAAGYRRALRRWRHWTSDSRGARRALAEARERYVVTLGRRVMIAWSVVAATRARRKAGAALLATSLSLILRRKACRRWAFRAASAAVEAEQTMAALEHCYDGCLRSHLCAWLALTKERRLLRRGVELLIRDRRAVLVSTGFRLWRRAAARVRETVLRNHRVKAWAADAARRRRLAALAVSFHAWSRLCCRATVIHSLTIRAADRTRRLALTRGFRSLCLYAHRGIAAIERRRARRAEAGRIAEEIRRSERERVRYVKRLQQEEARSAIFKSSSVSAFVDSGSPRRQQD------SEALLEEDCKGL---PLAPSLCVTFPELSSRQGEIFGKLQAETLEMRQRVTLAERAAQEARGEAARKAAAARAAIEEALAEGKKLKKEAEQHEALRAQMDSE--------------IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCSEVASERRASAGSAMADALRAAGSEA-AVEADRRAASLTNFGDVGEGKMAEARRLVGASAANERREVAGLALRRAEAKLRRTADLSLRTSLDHQP 4825
++L ++Q +SW F+ SEL+++ER IL+EAAE+ A++V SRRA GQR ++LLE A A L+SP T WVQVLGE+QR+T+ +DV+ RCE+VR RE+E F + FLQ LA+ VG SD+QWA+P AR + AS GA +R+ T ++ + S P S++ P + + GRT R G +G ++ ++ + P A + G + MAG G+ + +E AT D+TE L AS PV Q A G+G AV S TTM SAA LLAR G PL + A S++ A P E L + S+ G D R+S E P G TR L S GE+ + R ESR + P S Q PP + T A A I L Q L G +GT + G DG E + EAT RLL EA VKR+L MD+ D + + D GL DE P++FLA LGLVE KPL+ +L AL+RAP L DPS+ V EPRT R LR+QVAALGKE+ +R E CAEARKL+A+LRR +EV RR RA+N+D VDV CR LIA + E +VL ES VA EAERYH L R+QEQVE+TT +T++IVS+SEA+A L EME + ELS R+ AE+GLA+WE+AA++DP LRARRR YDCE+L L HRM GGAN SLA AF+ LR RT +QRRAR+WF+ + RR+A L R+AF ALA GSR +A AA A RCR G AAW++ L R++R W R+R A L+ WRQR K + G W E E+ LE RL FRERRAKRVVL+AW A Q + TV++ A+ G R VGR G C I D W GARLR EAL RR RFETQ AFRWW R + VL + AG RRA+RRWRH +D R + A AEAR YV++LGRRV+ AWS AATR RR+ GAA LA++L+ +R++ R+WAF+AA+AA EA+ T+ AL H D CLR HL AW A +ER LRR V LL+R RR L + G RLWRR A+ R+ LR R+ AW A AARRRR AAL+V F AW+ R IHSLT A A R+ R + R + R R + EEA + + ++++A V R ++ + A++EE + + P+ +L+ ++ + KLQAET E+RQR +A + + R EAARKAAA ++E ALAE +LK +AEQHE L AQ+DSE + RC+ A ERR +AGS +A+ALR AGSEA ++++ T+ EG +A ARR+ S A+ERREVA LALR AEAKLR +ADLSLR SLDH+P
Sbjct: 188 EMLAVLQADSWPVFDQSELDVLERQILEEAAEVLVDFSFDQLHLPNLGRRVSQSILSPASLTFRLCACDIFPWKRHGDQADVVNSRRAAGQRTNELLESAVATLNSPGTRMWVQVLGEVQRRTEGKVSDVVLRCESVRRREAERFRHVSGQTNTFLQDLAAAVGCSDNQWAVPPC-----KARAVQRTTGASAGGGAPRNTRNTTPSMPLGGSRPSSSISLPQPADKPRVRMLSSPERGRTVRTTLSRSCPVGIAGTVPVADTAQSPEAMAEESIVLDAPNRATENGGRGMAGAGKRDPPSPGHVARGIEGEF-ATGDKTEALRSRSAS----------------------PVLLGAQSEAGAVGQGTTVAAVERVPEVAAVGRGQSLKSITTMASAAKVLLARREDGERLGGPLSLSPTQAAALQDPSKQSAVAGRRNPPTAEVDDLVDSNSNLSIGRGGDDKAETQLSRWRASNRFEGRPDSAPRILNGSNTRRRLIVGQNSTGESPERNERRSESRRVSPGGESVEQ------------------PPQPDAIASPGVYTLATAAITLVDGRPATGQQQLYTPQQGGVRWGVGTFGSGTVGTTAEQGEDGGAEGEVRAGGHHGSTSEATTRLLREALRVKRVLAEMDKADATGSAIDNGLGDEDPEKFLATLGLVELKPLSARLVEALERAPRPLLGDPSVAVPEPRTTRGLRDQVAALGKEVAQRTEACAEARKLHAALRRQVEVTRRARARNMDRVDVTCRTLIAKAGGEVQVLHESRRVAHEAERYHATLARIQEQVEATTGETRKIVSTSEAIAWELRAEMEGRGGELSCRKRDAEEGLADWERAAQNDPDLRARRRAYDCEVLALRHRMGCGGANNISLASAFHLLRARTAQQRRAREWFARSTARRNALLVRSAFTALARGSRCRAATAAVAAARCRRGLAAWKRAATLARKIRTLCWLRERAAAVKALQGWRQRCVKAVYLAGGSAGGEDGRWAAGREERED-LEWRLELFRERRAKRVVLQAWRAAAQTSAVVTVMQGEAKCGWGREVGRRG------------CAAIQDEVAACSGW--GARLRTAEALGRRHRFETQIGSAFRWWRRHRQCKVLARTAGQRRAIRRWRHRVNDIRSSHEATAEARGSYVLSLGRRVLAAWSSAAATRVRRRTGAASLASALAFSTKRRSFRQWAFQAAAAAREADNTVVALGHYGDRCLRDHLRAWSAFARERCALRRCVGLLLRGRRVCLTAAGLRLWRRQTAKARDANLRECRIMAWTAAAARRRRFAALSVCFSAWTSTRRRVAAIHSLTRXXXXXXXXXXXXXXXXXXXXXXXXAATATAAATAERSHISRGEDTTRYNNGYRPRGDMGVVVEEATAPV--QTAIAAKVALEGKREGEEGGDGEVAAAVVEEPFRSRGRGKMGPT------KLTEKESLLIIKLQAETRELRQREAVAAKQEERLRLEAARKAAATAESLESALAERNRLKAQAEQHEVLFAQLDSEAQQAAAQAAALSDRLAGAEQDLGFEATRNTQELRERNEGNARLRAAATAAEERIAIAESTLRRKGLEIEELRSKCAKAGLDIGGRGKGGRQGRGGRASDTAGLEFRIFAASADARSALERCTVAADERRTAAGSVLAEALRVAGSEADTIKSNEAEFDCTSH----EGGVAAARRIAAESVADERREVADLALREAEAKLRNSADLSLRASLDHRP 1853
BLAST of mRNA_F-distichus_contig1055.476.1 vs. uniprot
Match: A0A6H5JU58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU58_9PHAE) HSP 1 Score: 558 bits (1439), Expect = 6.270e-162 Identity = 648/1973 (32.84%), Postives = 854/1973 (43.28%), Query Frame = 2
Query: 80 WRQRPTMTTPVHQILTIVQVESWSSFEHSELELVERGILDEAAELF---------------------------------------------------------------------------AEIVTSRRAEGQRIHQLLEGATACLDSPSTGAWVQVLGELQRQTQVLENDVISRCEAVRERESESFLEAPPRAIAFLQRLASRVGHSDDQWAIP----SSIEPTP--AARGTRVRN----TASRQSGASR-----------DKTKTVHMAVSPPESLA--------CPASSHSSAALAGNGH----FSGRTGGADRRRKYGFSGGSVSKSQQQQGLRAPLPAIAKDQGLQ--MAGGGRVELEPALNATQDRTELSDEDASVMKVMKPPAPSEQPRRPMPRPRPVQPSTQGGRSARGK----------------GAVQASTSAHQTTTMTSAANFLLAR---GKPLDFELS-----TATLSEEHADGTA----EGPGL-------DEWGTLEARRSVSD-GVIDRSSYPSEDAPY---GLRTRGSLD-SPESPGEADDNLSRES--REIGPRSASAAQLPLALQQQARGRRGPDCPPPMSRRMPRTADCTQAAADI--GLASTFEKRQTDLRKDNDDGRTVDHQDRAA-GTKDGYDGQCES-------LEATRRLLLEASSVKRLLESMDRTDVSTADADEGLEDEVPDRFLAKLGLVEFKPLAQKLAMALDRAPEGLFADPSLCVAEPRTIRALRNQVAALGKEITRRAETCAEARKLNASLRRLIEVARRTRAKNLDTVDVACRKLIAGSVEEAEVLQESWGVAREAERYHEALTRLQEQVESTTAKTQQIVSSSEALARLLHDEMERQDEELSQRRHVAEDGLAEWEQAAEDDPALRARRRLYDCEILVLSHRMAGGGANRTSLAIAFYSLRERTERQRRARQWFSEAKGRRDAHLTRAAFDALAHGSRLKAVVAAAAVGRCRPGFAAWRKETALTRRLRGFRWARDRVMAAAGLRRWRQRVGKRKFGNGWGIEVVEGE--------EVLEQRLSFFRERRAKRVVLRAWHGAVQAATVVEM---RAESGARRSVGRSGRGRRQFSWPARRCGGILDRDEVSLHWNRGARLRNTEALARRLRFETQGRHAFRWWWRQCRSAVLGKAAGYRRALRRWRHWTSDSRGARRALAEARERYVVTLGRRVMIAWSVVAATRARRKAGAALLATSLSLILRRKACRRWAFRAASAAVEAEQTMAALEHCYDGCLRSHLCAWLALTKERRLLRRGVELLIRDRRAVLVSTGFRLWRRAAARVRETVLRNHRVKAWAADAARRRRLAALAVSFHAWSRLCCRATVIHSLTIRAADRTRRLALTRGFRSLCLYAHRGIAAIERRRARRAEAGRIAEEIRRSERERVRYVKRLQQEEARSAIFKSSSVSAFVDSGSPRRQQDSEALLEEDCKGLPLAP---------------------SLCVTFP------------ELSSRQGEIFGKLQAETLEMRQRVTLAERAAQEARGEAARKAAAARAAIEEALAEGKKLKKEAEQHEALRAQMDSE--------------IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCSEVASERRASAGSAMADALRAAGSEA-AVEADRRAASLTNFGDVGEGKMAEARRLVGASAANERREVAGLALRRAEAKLRRTADLSLRTSLDHQP------SREDSRRPPDATSRLAPVTSFGGGA-------------HPTFESEPMLNDTTFVNKPLAENTSKACGVVISEASGTCCF-----PSSSSVAEGG------GGDSVHRVRMTGDQSGSGTKRDCPTST-AD---ELVGEPPAGGLQELREEIADLEGKILRRLGG 5233
WRQR + PVHQ +SW F+ SEL+++ER LDEAAE+ A++VTSRRA GQR ++LLE A A L+SP T WVQVLGE+QR+T+ +DV+ RCE+VR RE+E F + FL LA+ VG SD+QWA+P ++++ T +A G RN T+S GASR DK + V M SP S CP + +A + ++ G D + +GG + G R P +G++ A GG+ E+ A + + D A + R R P+ G +S G GAV + TTMTSAA LLAR G+ L S A L + + +A P + D G +A +S V +R + AP G RG L S GE ++ R S R + P S Q P P S P AAA++ G +T ++ Q +R D R+ + A G G +G+ + EATR+LL EA VKR+L MD+ D + + D GL DE P++FLA +GLVE KPL+ +L AL+RAP L D S+ V EPRT R LR+QVAALGKE+ +R E CAEARKL+A+LRR +EV RR RA+NLD VDV CR LIA + E +VL ES VA EAERYH L R+QEQVE+TT +T++IVS+SEA+A L EME + ELS R+ AE+GLA+WE+AA++DP LRARRR YDCE+LVL HRM GGAN SLA AF+ LR RT +QRRAR+WF + R +A L R+AF ALA GSR +A AA A RCR G AAW++ L R+++ W R+R A LR WRQR K + G G+ +G E E RL FRERRAKR+VL+AW A Q + V+ + G VGR G C I +DEV+ + GARLR EAL RR RFETQ AFRWW R + VL + AG RRA+RRWRH +D R + A AEAR GR +AW+ A R R A + + S R A RAA+ G R A LA T ER RRG ++ + G R V E A D + ++ + A L G A +ER A +A+E+ RSERER RY K L+Q+ + + P +E E+ G P P + V P +L+ ++ + KLQAET EMR+R +A + + + EAARKAAA A++E ALAE +LK +AEQ E L AQ+DSE + RC+ A ERR +AGS +A+ALR AGSEA ++++ T+ EG +A ARR+ S A+ERREVA LALR AEAKLR +ADLSLR SLDH+P S E+ ++ +PV A H F E + + A ++ ++ T F PSSSS+ GG G + G G + + T AD EP GL+EL+ EI DLEGKIL RLGG
Sbjct: 236 WRQRMAVAMPVHQ------ADSWPVFDQSELKVLERQTLDEAAEVLGEYGEQKRAFCLLGFMGSTVPSFQSSSWQTVDFSFDQLHLPNLGRRISQSVLSPASLTFRLCACDIFRWKRHGDQADVVTSRRAAGQRTNELLESAVATLNSPGTRMWVQVLGEVQRRTEGKVSDVVLRCESVRRREAERFRHVSGQTNTFLHDLAAAVGCSDNQWAVPPCKAAAVQRTTGSSAGGGAQRNKRSITSSMPLGASRPSPSIPLPQPADKPR-VRMLSSPERSRTVRTTLSRNCPVGIAGTVPVADTAQSPEAMAEKSIGLDVPNRATENGG---RGMAGTGKRDPPSPGHTPRGIEGESATGGKNEV-----ARTEPNKTLDLAAQAL-----------------RNRSASPALLGAQSEAGAVGQGTTVAAVERVPEVGAVGRGQNPKSITTMTSAAKVLLARREDGERLGGPFSPSPPPVAALQDPSSKKSAVAGRRNPPMAEVDELVDSGGDNKAETQLSRCRVSNRFEGRPDGAPQIVNGSNARGKLIVGQNSTGEGPESNERRSEFRRVSPGGESEEQPPQ----------------PDSMASPGVYTLATAAANLVDGRPATGQQ-QLGVRWDVGTIRSGTAGNPAEQGEGGGAEGEVRAGGHHGSTSEATRQLLREALRVKRVLAEMDKADATGSAIDNGLGDEDPEKFLASVGLVELKPLSARLVEALERAPRPLRGDTSVAVPEPRTTRGLRDQVAALGKEVVQRTEACAEARKLHAALRRQVEVTRRARARNLDRVDVTCRTLIAKAGGEVQVLHESRRVAHEAERYHATLARIQEQVEATTGETRKIVSTSEAIAWELRAEMEGRGGELSCRKRDAEEGLADWERAAQNDPHLRARRRAYDCELLVLRHRMGCGGANNISLASAFHHLRTRTAQQRRAREWFERSTARCNALLVRSAFSALARGSRSRAATAAVAAARCRRGLAAWKRAATLARKIQTLCWMRERAAAVKTLRGWRQRCVKAVYLEGGGVGGDDGRWATGREEREDSEWRLELFRERRAKRIVLQAWRAAAQTSAVIAVMLGETRCGWGPGVGRRG------------CAPI--QDEVAAYSGWGARLRTAEALGRRHRFETQIGSAFRWWRRHRQCNVLARTAGQRRAIRRWRHRVNDIRSSHEATAEAR-------GRSPRLAWTAAFARRRRFAALSVCFSAWTSTPRRVAAIHSLTRRAAAXXXXXXXXXXXXXFSLSG--RRAATAALAATAERSHNRRGEDM-------TRYNNGHGPRRDMGFVVEE-----------ATD------------------------PIQTAIAAKVALEGEVSLLRAGL------AQEKARVLERH----AVVCEMAKEVARSERERARYAKVLRQQ-----VKEXXXXXXXXXXXXPNMTTGAEG--EDRALGKPSLPWHDGFMTVQREGEESGDGEVAAAVVGEPYRSRGSGKMGSMKLTEKESLLIMKLQAETREMRRREAVAAKQEERLKLEAARKAAATAASLESALAEQNRLKAQAEQREVLIAQLDSEAQQAAAQAAALSDRLAGAEQDLGFEATRNTQELRERNEGNARLRAAATAAEERIAIAESTLRQKRLEIEELRSKCAKAGLGIGGRGKGGRQSRGGRASDTAGLEFRIFAASADARSALDRCTVAADERRTAAGSVLAEALRVAGSEADTIKSNEEDFDCTSRD---EGGVAAARRIAAESVADERREVADLALREAEAKLRHSADLSLRASLDHRPLANPRPSFEEGATTTPSSKVNSPVPGSRDPAPDRPENRKGNPNLHGNFREEAATEQEHPIEEKRASQPARNKDGELARTGETTLFNSSSCPSSSSLPSGGHQSNNESGSHAEGIGEAGRCPDPGVRNEHSLKTDADGRQHQQQEPAPDGLRELKREIFDLEGKILGRLGG 2074 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1055.476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig1055.476.1 >prot_F-distichus_contig1055.476.1 ID=prot_F-distichus_contig1055.476.1|Name=mRNA_F-distichus_contig1055.476.1|organism=Fucus distichus monoicous|type=polypeptide|length=1797bp MDCTSRVWRQRPTMTTPVHQILTIVQVESWSSFEHSELELVERGILDEAAback to top mRNA from alignment at F-distichus_contig1055:10619..22111+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig1055.476.1 ID=mRNA_F-distichus_contig1055.476.1|Name=mRNA_F-distichus_contig1055.476.1|organism=Fucus distichus monoicous|type=mRNA|length=11493bp|location=Sequence derived from alignment at F-distichus_contig1055:10619..22111+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig1055:10619..22111+ >mRNA_F-distichus_contig1055.476.1 ID=mRNA_F-distichus_contig1055.476.1|Name=mRNA_F-distichus_contig1055.476.1|organism=Fucus distichus monoicous|type=CDS|length=10782bp|location=Sequence derived from alignment at F-distichus_contig1055:10619..22111+ (Fucus distichus monoicous)back to top |