mRNA_F-distichus_contig10548.474.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: D8LC01_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC01_ECTSI) HSP 1 Score: 338 bits (868), Expect = 1.980e-112 Identity = 163/249 (65.46%), Postives = 195/249 (78.31%), Query Frame = 1
Query: 1 RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEFQTKSGT-KGIETIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAADDIDQKEV 744
RERKSSL+TKFRVRGIP +V++D+ G VIT DGRE + DPEGK+FPWRPKPL EL+GTEF TK GT G E ++GKTLALYFS+HWCPPCRAFTPRL +TYK +K R +DVEF+FVS DKD++QFD Y+++MPW AIPF D +R++AL RLGVR IP+L T+ DG VINQTA+GAA ADAK GLEFPWWPK VEDL+V +QSNG H+QE+PSLI+FMEA DD+DQKEV
Sbjct: 94 RERKSSLSTKFRVRGIPALVIMDQDGSVITPDGREVVGDDPEGKDFPWRPKPLSELIGTEFVTKPGTLAGEEVVRGKTLALYFSAHWCPPCRAFTPRLVQTYKDLKKRAGSDDVEFLFVSSDKDQAQFDDYFREMPWAAIPFGDVNRRRALATRLGVRGIPTLTTIDRDGVVINQTAKGAAIADAK-----------------GLEFPWWPKAVEDLSVNSQSNGFHVQEMPSLIVFMEACDDVDQKEV 325
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A6V1NWZ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NWZ1_HETAK) HSP 1 Score: 251 bits (640), Expect = 3.470e-78 Identity = 121/247 (48.99%), Postives = 164/247 (66.40%), Query Frame = 1
Query: 1 RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEFQTKSGTKGIETIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAADDIDQKE 741
R+RK+ L++KF+VRGIP++V+LDE G +IT +GR ++ +D EG++FPWRPKP+PELLG EF+ K GT G I+GKTL +YFS+HWC PCR FTP L + Y +K++ + N E +FVS DK +SQF+ YY +MPW+AIP+ D R L R V IP LV ++PDG V+N +ARG AD A + FPW P+P+EDL VT + G + E PSL++FME DD+ Q E
Sbjct: 93 RDRKTHLSSKFKVRGIPSLVILDEDGSLITLNGRASVQSDREGEDFPWRPKPIPELLGDEFKGKEGTVGRSVIEGKTLGIYFSAHWCGPCRGFTPTLAKVYNKLKEKGQNN-FEVIFVSGDKSDSQFEEYYGEMPWLAIPYGD-KRIDQLNQRFEVNGIPHLVILNPDGTVLNASARGKIDADENAEN-----------------FPWAPEPMEDLGVTAECMGSDINEKPSLVLFMEGVDDLQQDE 320
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: D7FK65_ECTSI (Nucleoredoxin, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK65_ECTSI) HSP 1 Score: 210 bits (534), Expect = 8.150e-65 Identity = 101/162 (62.35%), Postives = 122/162 (75.31%), Query Frame = 1
Query: 259 CPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAADDIDQKEV 744
CPPCRAFTPRL +TYK +K R +DVEF+FVS DKD++QFD Y+++MPW AIPF D +R++AL RLGVR IP+L T+ DG VINQTA+GAA ADAK GLEFPWWPK VEDL+V +QSNG H+QE+PSLI+FMEA DD+DQKEV
Sbjct: 9 CPPCRAFTPRLVQTYKDLKKRAGSDDVEFLFVSSDKDQAQFDDYFREMPWAAIPFGDVNRRRALATRLGVRGIPTLTTIDRDGVVINQTAKGAAIADAK-----------------GLEFPWWPKAVEDLSVNSQSNGFHVQEMPSLIVFMEACDDVDQKEV 153
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A7S4G1A5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G1A5_9EUGL) HSP 1 Score: 217 bits (552), Expect = 1.570e-64 Identity = 108/243 (44.44%), Postives = 150/243 (61.73%), Query Frame = 1
Query: 1 RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEFQTKSGTKGIE--TIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAAD 723
RERK +L+TKF+V+GIPT V+L G +IT DGR A+ DP+G++FPW+PKP EL+G F G ++ ++GK L LYFS+HWCPPCR FTP+L E YKA+K+ D E VF S D+DE FD Y+ +MPW+A+P+ D RK+AL GV IP+L + DG +I RG D + G +FPW+PKP++DLA + +G + + PSL++ M+ AD
Sbjct: 103 RERKEALSTKFKVQGIPTFVILGTDGSIITKDGRSAVTADPKGEDFPWKPKPFHELIGDAF-VGQGKAPLDQSAVEGKVLGLYFSAHWCPPCRGFTPKLAEWYKAVKETLP--DFEIVFASSDRDEGSFDEYFAEMPWIALPYADRKRKEALSTLCGVEGIPTLAIIDKDGRIITTNGRGIPEMDPE-----------------GKQFPWYPKPIKDLA--HEQDG--VDDCPSLVVLMDGAD 321
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A6T2CYP1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T2CYP1_9EUGL) HSP 1 Score: 215 bits (548), Expect = 2.150e-64 Identity = 111/251 (44.22%), Postives = 149/251 (59.36%), Query Frame = 1
Query: 1 RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEF--QTKSGTKGIETIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDR-PEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAADDIDQKEV 744
RERK++L+ KF+V GIP+ V+LD+ G IT DGR A+ DP G+ FPW+PKP EL+G F Q K+ I GK L LYFS+HWCPPCR FTP+L E YK++K+ PE E VF S D+D+S FD Y+ +MPW+A+P+ED RK+ L + GV IPS V + DG +I RG D + G +FPW+PKPV++LA T + + PS ++ M+ AD Q V
Sbjct: 93 RERKAALSKKFKVDGIPSFVILDQDGSTITKDGRSAVSEDPTGEEFPWKPKPFHELIGESFIGQNKAPLDK-SAIDGKVLGLYFSAHWCPPCRGFTPKLAEWYKSVKETLPE---FEIVFASSDRDQSSFDDYFAEMPWIALPYEDRKRKETLSNLCGVSGIPSFVIIDKDGSIITTNGRGIPEMDPE-----------------GKQFPWYPKPVKNLAYDTDG----INDTPSFVVLMDGADKETQDAV 318
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A7S4G189_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G189_9EUGL) HSP 1 Score: 217 bits (552), Expect = 2.540e-64 Identity = 108/243 (44.44%), Postives = 150/243 (61.73%), Query Frame = 1
Query: 1 RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEFQTKSGTKGIE--TIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAAD 723
RERK +L+TKF+V+GIPT V+L G +IT DGR A+ DP+G++FPW+PKP EL+G F G ++ ++GK L LYFS+HWCPPCR FTP+L E YKA+K+ D E VF S D+DE FD Y+ +MPW+A+P+ D RK+AL GV IP+L + DG +I RG D + G +FPW+PKP++DLA + +G + + PSL++ M+ AD
Sbjct: 103 RERKEALSTKFKVQGIPTFVILGTDGSIITKDGRSAVTADPKGEDFPWKPKPFHELIGDAF-VGQGKAPLDQSAVEGKVLGLYFSAHWCPPCRGFTPKLAEWYKAVKETLP--DFEIVFASSDRDEGSFDEYFAEMPWIALPYADRKRKEALSTLCGVEGIPTLAIIDKDGRIITTNGRGIPEMDPE-----------------GKQFPWYPKPIKDLA--HEQDG--VDDCPSLVVLMDGAD 321
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A7S2UY08_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY08_9STRA) HSP 1 Score: 211 bits (538), Expect = 6.720e-63 Identity = 105/243 (43.21%), Postives = 151/243 (62.14%), Query Frame = 1
Query: 10 KSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEFQTKSGTKGIETIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAADDIDQK 738
+ +L KF+ +GIP V+LD +GE++T +GRE + +P +FPW P P+ ELLG+EF GT + GKTL +YFS+HWCPPCR FTP+L + Y +K + + D E +FVS D+++SQFD Y+ +MPW+A+P+ R K L +GVR IPS + D +VIN+ AR D + G FPW P+P+EDL+V T G+ + +VP+LI+FME ADD+DQ+
Sbjct: 96 RRALGRKFKCQGIPFFVILDSNGEMVTDNGREGVMEEP--NSFPWHPVPITELLGSEFIGAGGTTTTPDLSGKTLGIYFSAHWCPPCRGFTPKLVDFYNNMKSKRD--DFEIIFVSRDREQSQFDEYFGEMPWLAVPYTSASRDK-LAKSMGVRGIPSFQILDADRKVINKDARMRVENDLQ-----------------GEGFPWPPQPLEDLSVDTTCMGYDINDVPALIVFMEGADDMDQQ 316
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A813H0J6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H0J6_POLGL) HSP 1 Score: 203 bits (516), Expect = 5.450e-59 Identity = 110/243 (45.27%), Postives = 144/243 (59.26%), Query Frame = 1
Query: 1 RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELL-GTEFQTKSGTKGIETIQGKTLALYFSSHWCPPCRAFTPRLTETY-KAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAAD 723
RERK +L+ K++V+GIPT+V+LD +G+VIT DGR AI DP+G NFPW+PK L ++L G + K G T+ GK LYFS+HWC PCR FTP+L E Y K +K + +E VFVS D+D+ FD YY + PW+A+ F + K+ L LGV+ IP+LV V DG +I + RGA D + G EFPW+PKPV DLA + L E I F EAAD
Sbjct: 96 RERKETLSKKYKVQGIPTVVILDGTGQVITKDGRTAISGDPKGNNFPWKPKSLKDILAGAKIIGKDGPVDASTLHGKAFGLYFSAHWCGPCRGFTPKLAEWYEKDLKSKG----LEIVFVSSDRDQEAFDGYYGEQPWLALDFSNRAEKEQLSTLLGVQGIPNLVIVDKDGSIITKEGRGAVSNDPE-----------------GAEFPWYPKPVLDLA----AGPGPLNEATCCIAFCEAAD 313
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A7S0QS45_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QS45_9CRYP) HSP 1 Score: 198 bits (503), Expect = 4.610e-58 Identity = 103/241 (42.74%), Postives = 142/241 (58.92%), Query Frame = 1
Query: 1 RERKSSLNTKFRVRGIPTMVVLD-ESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEFQTKSGTKGIETIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAA 720
R+ K+ L+ KF+V GIP++V+LD ++G VI+TDGR A+ DP G+ +PW P E LGT+F T SG ++GK + +YFS+HWC PCR FTP+L ETY IK +D E VF S D+DE QF Y+ MPW+A+PFED DR +L GV+ IPSL ++PDG ++ + A AD G +FPW PKPV D+ ++ G L P+L+ F E +
Sbjct: 111 RDLKAKLSKKFKVNGIPSLVLLDAKTGAVISTDGRAALSKDPTGEKYPWVPPSPLEALGTKFVTSSGESDGSAVKGKYVGIYFSAHWCGPCRNFTPKLAETYAKIK--AARSDFEIVFCSADRDEDQFKEYFGTMPWIALPFEDRDRADSLNELFGVQGIPSLAILAPDGSIVTKDGDDAVRADPD-----------------GADFPWLPKPVRDV----EAAGGDLNTRPALVAFCEGS 328
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A7S1IHV4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IHV4_9EUGL) HSP 1 Score: 198 bits (504), Expect = 3.330e-57 Identity = 106/242 (43.80%), Postives = 135/242 (55.79%), Query Frame = 1
Query: 1 RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEFQTKSGTK-GIETIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAAD 723
R +K +L+ KF+V GIPT V+LD G+VIT DGR A+ DP G++FPWRP E LG F + G K G +Q K L LYFS+HWCPPCR FTP+L E YK +K P+ D E VFVS D+D+ FD Y+ +MPW+A+PFE+ K++L V IPS V V DG I + RG D + G FPW P V+D+A T L L+ ME AD
Sbjct: 100 RAKKDALSKKFKVSGIPTFVILDADGKVITADGRGAVSADPTGQDFPWRPPTFAEALGDSFVGQGGEKLGKSAVQDKVLGLYFSAHWCPPCRGFTPKLAEWYKTVK--PKLPDFELVFVSSDRDQGAFDEYFAEMPWLALPFENRKAKESLSSMFEVEGIPSFVIVDKDGSTITTSGRGIPQMDPE-----------------GTNFPWHPPAVKDVAGDTAG----LNSSVCLLALMEGAD 318 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10548.474.1 >prot_F-distichus_contig10548.474.1 ID=prot_F-distichus_contig10548.474.1|Name=mRNA_F-distichus_contig10548.474.1|organism=Fucus distichus monoicous|type=polypeptide|length=255bp RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPback to top mRNA from alignment at F-distichus_contig10548:8632..10849+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10548.474.1 ID=mRNA_F-distichus_contig10548.474.1|Name=mRNA_F-distichus_contig10548.474.1|organism=Fucus distichus monoicous|type=mRNA|length=2218bp|location=Sequence derived from alignment at F-distichus_contig10548:8632..10849+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10548:8632..10849+ >mRNA_F-distichus_contig10548.474.1 ID=mRNA_F-distichus_contig10548.474.1|Name=mRNA_F-distichus_contig10548.474.1|organism=Fucus distichus monoicous|type=CDS|length=1530bp|location=Sequence derived from alignment at F-distichus_contig10548:8632..10849+ (Fucus distichus monoicous)back to top |