mRNA_F-distichus_contig10548.474.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10548.474.1
Unique NamemRNA_F-distichus_contig10548.474.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: D8LC01_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC01_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 1.980e-112
Identity = 163/249 (65.46%), Postives = 195/249 (78.31%), Query Frame = 1
Query:    1 RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEFQTKSGT-KGIETIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAADDIDQKEV 744
            RERKSSL+TKFRVRGIP +V++D+ G VIT DGRE +  DPEGK+FPWRPKPL EL+GTEF TK GT  G E ++GKTLALYFS+HWCPPCRAFTPRL +TYK +K R   +DVEF+FVS DKD++QFD Y+++MPW AIPF D +R++AL  RLGVR IP+L T+  DG VINQTA+GAA ADAK                 GLEFPWWPK VEDL+V +QSNG H+QE+PSLI+FMEA DD+DQKEV
Sbjct:   94 RERKSSLSTKFRVRGIPALVIMDQDGSVITPDGREVVGDDPEGKDFPWRPKPLSELIGTEFVTKPGTLAGEEVVRGKTLALYFSAHWCPPCRAFTPRLVQTYKDLKKRAGSDDVEFLFVSSDKDQAQFDDYFREMPWAAIPFGDVNRRRALATRLGVRGIPTLTTIDRDGVVINQTAKGAAIADAK-----------------GLEFPWWPKAVEDLSVNSQSNGFHVQEMPSLIVFMEACDDVDQKEV 325          
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A6V1NWZ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NWZ1_HETAK)

HSP 1 Score: 251 bits (640), Expect = 3.470e-78
Identity = 121/247 (48.99%), Postives = 164/247 (66.40%), Query Frame = 1
Query:    1 RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEFQTKSGTKGIETIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAADDIDQKE 741
            R+RK+ L++KF+VRGIP++V+LDE G +IT +GR ++ +D EG++FPWRPKP+PELLG EF+ K GT G   I+GKTL +YFS+HWC PCR FTP L + Y  +K++ + N  E +FVS DK +SQF+ YY +MPW+AIP+ D  R   L  R  V  IP LV ++PDG V+N +ARG   AD  A +                 FPW P+P+EDL VT +  G  + E PSL++FME  DD+ Q E
Sbjct:   93 RDRKTHLSSKFKVRGIPSLVILDEDGSLITLNGRASVQSDREGEDFPWRPKPIPELLGDEFKGKEGTVGRSVIEGKTLGIYFSAHWCGPCRGFTPTLAKVYNKLKEKGQNN-FEVIFVSGDKSDSQFEEYYGEMPWLAIPYGD-KRIDQLNQRFEVNGIPHLVILNPDGTVLNASARGKIDADENAEN-----------------FPWAPEPMEDLGVTAECMGSDINEKPSLVLFMEGVDDLQQDE 320          
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: D7FK65_ECTSI (Nucleoredoxin, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK65_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 8.150e-65
Identity = 101/162 (62.35%), Postives = 122/162 (75.31%), Query Frame = 1
Query:  259 CPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAADDIDQKEV 744
            CPPCRAFTPRL +TYK +K R   +DVEF+FVS DKD++QFD Y+++MPW AIPF D +R++AL  RLGVR IP+L T+  DG VINQTA+GAA ADAK                 GLEFPWWPK VEDL+V +QSNG H+QE+PSLI+FMEA DD+DQKEV
Sbjct:    9 CPPCRAFTPRLVQTYKDLKKRAGSDDVEFLFVSSDKDQAQFDDYFREMPWAAIPFGDVNRRRALATRLGVRGIPTLTTIDRDGVVINQTAKGAAIADAK-----------------GLEFPWWPKAVEDLSVNSQSNGFHVQEMPSLIVFMEACDDVDQKEV 153          
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A7S4G1A5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G1A5_9EUGL)

HSP 1 Score: 217 bits (552), Expect = 1.570e-64
Identity = 108/243 (44.44%), Postives = 150/243 (61.73%), Query Frame = 1
Query:    1 RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEFQTKSGTKGIE--TIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAAD 723
            RERK +L+TKF+V+GIPT V+L   G +IT DGR A+  DP+G++FPW+PKP  EL+G  F    G   ++   ++GK L LYFS+HWCPPCR FTP+L E YKA+K+     D E VF S D+DE  FD Y+ +MPW+A+P+ D  RK+AL    GV  IP+L  +  DG +I    RG    D +                 G +FPW+PKP++DLA   + +G  + + PSL++ M+ AD
Sbjct:  103 RERKEALSTKFKVQGIPTFVILGTDGSIITKDGRSAVTADPKGEDFPWKPKPFHELIGDAF-VGQGKAPLDQSAVEGKVLGLYFSAHWCPPCRGFTPKLAEWYKAVKETLP--DFEIVFASSDRDEGSFDEYFAEMPWIALPYADRKRKEALSTLCGVEGIPTLAIIDKDGRIITTNGRGIPEMDPE-----------------GKQFPWYPKPIKDLA--HEQDG--VDDCPSLVVLMDGAD 321          
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A6T2CYP1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T2CYP1_9EUGL)

HSP 1 Score: 215 bits (548), Expect = 2.150e-64
Identity = 111/251 (44.22%), Postives = 149/251 (59.36%), Query Frame = 1
Query:    1 RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEF--QTKSGTKGIETIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDR-PEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAADDIDQKEV 744
            RERK++L+ KF+V GIP+ V+LD+ G  IT DGR A+  DP G+ FPW+PKP  EL+G  F  Q K+       I GK L LYFS+HWCPPCR FTP+L E YK++K+  PE    E VF S D+D+S FD Y+ +MPW+A+P+ED  RK+ L +  GV  IPS V +  DG +I    RG    D +                 G +FPW+PKPV++LA  T      + + PS ++ M+ AD   Q  V
Sbjct:   93 RERKAALSKKFKVDGIPSFVILDQDGSTITKDGRSAVSEDPTGEEFPWKPKPFHELIGESFIGQNKAPLDK-SAIDGKVLGLYFSAHWCPPCRGFTPKLAEWYKSVKETLPE---FEIVFASSDRDQSSFDDYFAEMPWIALPYEDRKRKETLSNLCGVSGIPSFVIIDKDGSIITTNGRGIPEMDPE-----------------GKQFPWYPKPVKNLAYDTDG----INDTPSFVVLMDGADKETQDAV 318          
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A7S4G189_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G189_9EUGL)

HSP 1 Score: 217 bits (552), Expect = 2.540e-64
Identity = 108/243 (44.44%), Postives = 150/243 (61.73%), Query Frame = 1
Query:    1 RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEFQTKSGTKGIE--TIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAAD 723
            RERK +L+TKF+V+GIPT V+L   G +IT DGR A+  DP+G++FPW+PKP  EL+G  F    G   ++   ++GK L LYFS+HWCPPCR FTP+L E YKA+K+     D E VF S D+DE  FD Y+ +MPW+A+P+ D  RK+AL    GV  IP+L  +  DG +I    RG    D +                 G +FPW+PKP++DLA   + +G  + + PSL++ M+ AD
Sbjct:  103 RERKEALSTKFKVQGIPTFVILGTDGSIITKDGRSAVTADPKGEDFPWKPKPFHELIGDAF-VGQGKAPLDQSAVEGKVLGLYFSAHWCPPCRGFTPKLAEWYKAVKETLP--DFEIVFASSDRDEGSFDEYFAEMPWIALPYADRKRKEALSTLCGVEGIPTLAIIDKDGRIITTNGRGIPEMDPE-----------------GKQFPWYPKPIKDLA--HEQDG--VDDCPSLVVLMDGAD 321          
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A7S2UY08_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY08_9STRA)

HSP 1 Score: 211 bits (538), Expect = 6.720e-63
Identity = 105/243 (43.21%), Postives = 151/243 (62.14%), Query Frame = 1
Query:   10 KSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEFQTKSGTKGIETIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAADDIDQK 738
            + +L  KF+ +GIP  V+LD +GE++T +GRE +  +P   +FPW P P+ ELLG+EF    GT     + GKTL +YFS+HWCPPCR FTP+L + Y  +K + +  D E +FVS D+++SQFD Y+ +MPW+A+P+    R K L   +GVR IPS   +  D +VIN+ AR     D +                 G  FPW P+P+EDL+V T   G+ + +VP+LI+FME ADD+DQ+
Sbjct:   96 RRALGRKFKCQGIPFFVILDSNGEMVTDNGREGVMEEP--NSFPWHPVPITELLGSEFIGAGGTTTTPDLSGKTLGIYFSAHWCPPCRGFTPKLVDFYNNMKSKRD--DFEIIFVSRDREQSQFDEYFGEMPWLAVPYTSASRDK-LAKSMGVRGIPSFQILDADRKVINKDARMRVENDLQ-----------------GEGFPWPPQPLEDLSVDTTCMGYDINDVPALIVFMEGADDMDQQ 316          
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A813H0J6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H0J6_POLGL)

HSP 1 Score: 203 bits (516), Expect = 5.450e-59
Identity = 110/243 (45.27%), Postives = 144/243 (59.26%), Query Frame = 1
Query:    1 RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELL-GTEFQTKSGTKGIETIQGKTLALYFSSHWCPPCRAFTPRLTETY-KAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAAD 723
            RERK +L+ K++V+GIPT+V+LD +G+VIT DGR AI  DP+G NFPW+PK L ++L G +   K G     T+ GK   LYFS+HWC PCR FTP+L E Y K +K +     +E VFVS D+D+  FD YY + PW+A+ F +   K+ L   LGV+ IP+LV V  DG +I +  RGA   D +                 G EFPW+PKPV DLA    +    L E    I F EAAD
Sbjct:   96 RERKETLSKKYKVQGIPTVVILDGTGQVITKDGRTAISGDPKGNNFPWKPKSLKDILAGAKIIGKDGPVDASTLHGKAFGLYFSAHWCGPCRGFTPKLAEWYEKDLKSKG----LEIVFVSSDRDQEAFDGYYGEQPWLALDFSNRAEKEQLSTLLGVQGIPNLVIVDKDGSIITKEGRGAVSNDPE-----------------GAEFPWYPKPVLDLA----AGPGPLNEATCCIAFCEAAD 313          
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A7S0QS45_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QS45_9CRYP)

HSP 1 Score: 198 bits (503), Expect = 4.610e-58
Identity = 103/241 (42.74%), Postives = 142/241 (58.92%), Query Frame = 1
Query:    1 RERKSSLNTKFRVRGIPTMVVLD-ESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEFQTKSGTKGIETIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAA 720
            R+ K+ L+ KF+V GIP++V+LD ++G VI+TDGR A+  DP G+ +PW P    E LGT+F T SG      ++GK + +YFS+HWC PCR FTP+L ETY  IK     +D E VF S D+DE QF  Y+  MPW+A+PFED DR  +L    GV+ IPSL  ++PDG ++ +    A  AD                   G +FPW PKPV D+    ++ G  L   P+L+ F E +
Sbjct:  111 RDLKAKLSKKFKVNGIPSLVLLDAKTGAVISTDGRAALSKDPTGEKYPWVPPSPLEALGTKFVTSSGESDGSAVKGKYVGIYFSAHWCGPCRNFTPKLAETYAKIK--AARSDFEIVFCSADRDEDQFKEYFGTMPWIALPFEDRDRADSLNELFGVQGIPSLAILAPDGSIVTKDGDDAVRADPD-----------------GADFPWLPKPVRDV----EAAGGDLNTRPALVAFCEGS 328          
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Match: A0A7S1IHV4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IHV4_9EUGL)

HSP 1 Score: 198 bits (504), Expect = 3.330e-57
Identity = 106/242 (43.80%), Postives = 135/242 (55.79%), Query Frame = 1
Query:    1 RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRPKPLPELLGTEFQTKSGTK-GIETIQGKTLALYFSSHWCPPCRAFTPRLTETYKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKALGHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLCRLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAAD 723
            R +K +L+ KF+V GIPT V+LD  G+VIT DGR A+  DP G++FPWRP    E LG  F  + G K G   +Q K L LYFS+HWCPPCR FTP+L E YK +K  P+  D E VFVS D+D+  FD Y+ +MPW+A+PFE+   K++L     V  IPS V V  DG  I  + RG    D +                 G  FPW P  V+D+A  T      L     L+  ME AD
Sbjct:  100 RAKKDALSKKFKVSGIPTFVILDADGKVITADGRGAVSADPTGQDFPWRPPTFAEALGDSFVGQGGEKLGKSAVQDKVLGLYFSAHWCPPCRGFTPKLAEWYKTVK--PKLPDFELVFVSSDRDQGAFDEYFAEMPWLALPFENRKAKESLSSMFEVEGIPSFVIVDKDGSTITTSGRGIPQMDPE-----------------GTNFPWHPPAVKDVAGDTAG----LNSSVCLLALMEGAD 318          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10548.474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC01_ECTSI1.980e-11265.46Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A6V1NWZ1_HETAK3.470e-7848.99Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FK65_ECTSI8.150e-6562.35Nucleoredoxin, putative n=1 Tax=Ectocarpus silicul... [more]
A0A7S4G1A5_9EUGL1.570e-6444.44Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A6T2CYP1_9EUGL2.150e-6444.22Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S4G189_9EUGL2.540e-6444.44Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S2UY08_9STRA6.720e-6343.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A813H0J6_POLGL5.450e-5945.27Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S0QS45_9CRYP4.610e-5842.74Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S1IHV4_9EUGL3.330e-5743.80Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10548contigF-distichus_contig10548:8632..10849 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score341.3
Seed ortholog evalue4e-91
Seed eggNOG ortholog2880.D8LC01
KEGG koko:K17609
Hectar predicted targeting categoryother localisation
EggNOG free text desc.cellular oxidant detoxification
EggNOG OGsKOG2501@1,KOG2501@2759
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-20_003930.1
EC1.8.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009
Exons4
Model size765
Cds size765
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10548.474.1prot_F-distichus_contig10548.474.1Fucus distichus monoicouspolypeptideF-distichus_contig10548 8632..10849 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928979.989168-CDS-F-distichus_contig10548:8631..88881622928979.989168-CDS-F-distichus_contig10548:8631..8888Fucus distichus monoicousCDSF-distichus_contig10548 8632..8888 +
1690885089.8152275-CDS-F-distichus_contig10548:8631..88881690885089.8152275-CDS-F-distichus_contig10548:8631..8888Fucus distichus monoicousCDSF-distichus_contig10548 8632..8888 +
1622928980.003748-CDS-F-distichus_contig10548:9131..92601622928980.003748-CDS-F-distichus_contig10548:9131..9260Fucus distichus monoicousCDSF-distichus_contig10548 9132..9260 +
1690885089.8284793-CDS-F-distichus_contig10548:9131..92601690885089.8284793-CDS-F-distichus_contig10548:9131..9260Fucus distichus monoicousCDSF-distichus_contig10548 9132..9260 +
1622928980.0185232-CDS-F-distichus_contig10548:9870..100901622928980.0185232-CDS-F-distichus_contig10548:9870..10090Fucus distichus monoicousCDSF-distichus_contig10548 9871..10090 +
1690885089.8381152-CDS-F-distichus_contig10548:9870..100901690885089.8381152-CDS-F-distichus_contig10548:9870..10090Fucus distichus monoicousCDSF-distichus_contig10548 9871..10090 +
1622928980.0325024-CDS-F-distichus_contig10548:10690..108491622928980.0325024-CDS-F-distichus_contig10548:10690..10849Fucus distichus monoicousCDSF-distichus_contig10548 10691..10849 +
1690885089.8478696-CDS-F-distichus_contig10548:10690..108491690885089.8478696-CDS-F-distichus_contig10548:10690..10849Fucus distichus monoicousCDSF-distichus_contig10548 10691..10849 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10548.474.1

>prot_F-distichus_contig10548.474.1 ID=prot_F-distichus_contig10548.474.1|Name=mRNA_F-distichus_contig10548.474.1|organism=Fucus distichus monoicous|type=polypeptide|length=255bp
RERKSSLNTKFRVRGIPTMVVLDESGEVITTDGREAIDTDPEGKNFPWRP
KPLPELLGTEFQTKSGTKGIETIQGKTLALYFSSHWCPPCRAFTPRLTET
YKAIKDRPEGNDVEFVFVSWDKDESQFDAYYKDMPWVAIPFEDGDRKKAL
GHRLGVRAIPSLVTVSPDGEVINQTARGAAFADAKARHLLSNGLPCTSLC
RLGLEFPWWPKPVEDLAVTTQSNGHHLQEVPSLIMFMEAADDIDQKEVPY
DRVC*
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mRNA from alignment at F-distichus_contig10548:8632..10849+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10548.474.1 ID=mRNA_F-distichus_contig10548.474.1|Name=mRNA_F-distichus_contig10548.474.1|organism=Fucus distichus monoicous|type=mRNA|length=2218bp|location=Sequence derived from alignment at F-distichus_contig10548:8632..10849+ (Fucus distichus monoicous)
AGGGAGAGGAAAAGTTCCTTGAACACCAAGTTTAGGGTTCGAGGTATTCC GACCATGGTGGTGCTTGACGAGAGCGGAGAGGTGATCACGACAGACGGGC GCGAGGCGATCGACACAGACCCCGAGGGTAAGAACTTCCCGTGGCGCCCG AAGCCGCTTCCCGAGCTCTTGGGCACCGAGTTCCAGACCAAGTCGGGGAC GAAAGGGATCGAGACCATACAAGGGAAGACTCTTGCGCTGTACTTCTCTT CCCACTGGTGAGCGACAAAGTTGGGTAAGTGTGTAGATGGGGTTTCCTCT GGGGCGGGATGTTTTTGTTCTGTGCGAGCCATCACGCTGTCTTATGCGCA ATACGTGTCCCTTCCGCTATCAGCACATTTATGAACTGTGCGAAGCACTC CGTAAAATATGTCGCGCTTGATCCCGATCTCTGTTTCTCGCTCGCATTTT TTTGGCTCGTTGTTCTTGTCCCCCGCGGCGACTGGTGCGATGGAGCTCAG GTGTCCCCCGTGTCGGGCGTTCACCCCTCGACTGACGGAAACTTACAAGG CCATCAAGGACAGGCCGGAAGGCAACGACGTGGAGTTCGTCTTCGTCAGC TGGGACAAGGACGAGTCGCAGTTTGACGCGTGAGAAATGAGGGGGGGGGA TGGGAGTGTTCGACCATTTTGTTCATGACAGTTTTGTACATTTGAAAACA CTTTTCTTTTTATCCCTTCCTCTTGCTAACTTTCCAAGTATTTATCCGCT TTTGGCTTAGGGTGATCGTGTTAGGCCAGGTCTTGGTGTGCCGTGTTGCC TCCGCACTGCGGCGAATGCGCCGAGCAGTTCGACGATGTCAGCGCATCCG AGGCAGGAGTCGTAGTTGTTGTTCTTGGTGTTGGTTGGTGGGCGCTTTCT CGTGCCTGCCTCGCACTGACACGCGGAGGAGTACATCATTGCTTAAACCA AAAGATGTAATTGCTGACGACCGATTCCACGAGTGGAGATTACATAAAAA AGTATACTTGGTAGGAAAAGGTGCATCCAATACAGTATTGTAGAAGCGAG ATACTCGCGGCACCAGTAACAGGGGCGAGGAATCGCCTCACCATCCCCAA TCATCCATCAACCAAAAGCGGGTTCAGATCAAAATCCATCGTATTACGAC GATGAACCATGCGAATGCAATTATGGTATTGTCGGGTTGCAACCCGCCCC CGCCCACCCCCTATTCACCCGGCGGTTGCTTCCCTCCAGGTACTACAAGG ACATGCCCTGGGTGGCGATTCCATTCGAGGACGGAGATCGCAAGAAGGCG CTCGGGCATCGCTTGGGGGTGCGCGCGATCCCCAGCCTGGTGACGGTATC TCCAGACGGTGAAGTCATCAACCAGACAGCCAGGGGCGCGGCCTTTGCTG ACGCGAAGGCGAGACACTTGCTCTCCAATGGGCTGCCATGTACCTCGTTG TGTCGTCTTGTGTTGGTGTACCTTTTTGTGTGCTTTGTACCTTTATTACG ATCACGCTTGAGCGTACCTTTTGATGTGAAGGTGAGGGGTACAAGGTCCT CGTGGTCAGAATCATGCGCACACGGCGTGGGTGTGTACGGGGTGGTAATA CATATTTTCAAACATCCCCTCCCCCTTCCCCCCCATGGAATGCCGCCACA GGGCAATCTCCTTCACCCGTAAAAGGAAAAACCTTTTCATGAGATCCGAT CCAAGATATTGACGAGTTAGCCTGTTATGTCGTACCTCGAGGTTCCCGCT GCAACCATTTTACCAAGTCGCTCTGGGAGAGAAGGCAATGGATACTTGCT AGTTTTCGGTCAAATCTCCACGGGGCGCAAATATACACAAGATATACGAT GTGCAGGTCGTAAGTTGAGCTGTCAATGATACAATAAGAGATTGGTAGCT AAACCCTCCCCACCCCCCAAAACAAACAAACGAACAAACACCAAGATGCT CTTGTTTGGTCGAAAGCTCTTCAGCTGAAAGCGAGATGAGAATGGAAAGC TGCAGCAAAACGATGATCATATGCTCCTCGTTTTGACCCACGTCCCTTAC GTTACGCAGGGTCTCGAGTTTCCATGGTGGCCCAAGCCTGTGGAGGACCT CGCGGTGACCACCCAGAGCAATGGGCATCACCTGCAGGAGGTCCCCTCCC TTATCATGTTCATGGAGGCAGCGGACGACATCGATCAAAAAGAGGTACCG TACGATCGAGTGTGCTGA
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Coding sequence (CDS) from alignment at F-distichus_contig10548:8632..10849+

>mRNA_F-distichus_contig10548.474.1 ID=mRNA_F-distichus_contig10548.474.1|Name=mRNA_F-distichus_contig10548.474.1|organism=Fucus distichus monoicous|type=CDS|length=1530bp|location=Sequence derived from alignment at F-distichus_contig10548:8632..10849+ (Fucus distichus monoicous)
AGGGAGAGGAAAAGTTCCTTGAACACCAAGTTTAGGGTTCGAGGTATTCC
GACCATGGTGGTGCTTGACGAGAGCGGAGAGGTGATCACGACAGACGGGC
GCGAGGCGATCGACACAGACCCCGAGGGTAAGAACTTCCCGTGGCGCCCG
AAGCCGCTTCCCGAGCTCTTGGGCACCGAGTTCCAGACCAAGTCGGGGAC
GAAAGGGATCGAGACCATACAAGGGAAGACTCTTGCGCTGTACTTCTCTT
CCCACTGAGGGAGAGGAAAAGTTCCTTGAACACCAAGTTTAGGGTTCGAG
GTATTCCGACCATGGTGGTGCTTGACGAGAGCGGAGAGGTGATCACGACA
GACGGGCGCGAGGCGATCGACACAGACCCCGAGGGTAAGAACTTCCCGTG
GCGCCCGAAGCCGCTTCCCGAGCTCTTGGGCACCGAGTTCCAGACCAAGT
CGGGGACGAAAGGGATCGAGACCATACAAGGGAAGACTCTTGCGCTGTAC
TTCTCTTCCCACTGGTGTCCCCCGTGTCGGGCGTTCACCCCTCGACTGAC
GGAAACTTACAAGGCCATCAAGGACAGGCCGGAAGGCAACGACGTGGAGT
TCGTCTTCGTCAGCTGGGACAAGGACGAGTCGCAGTTTGACGCGTGTCCC
CCGTGTCGGGCGTTCACCCCTCGACTGACGGAAACTTACAAGGCCATCAA
GGACAGGCCGGAAGGCAACGACGTGGAGTTCGTCTTCGTCAGCTGGGACA
AGGACGAGTCGCAGTTTGACGCGTACTACAAGGACATGCCCTGGGTGGCG
ATTCCATTCGAGGACGGAGATCGCAAGAAGGCGCTCGGGCATCGCTTGGG
GGTGCGCGCGATCCCCAGCCTGGTGACGGTATCTCCAGACGGTGAAGTCA
TCAACCAGACAGCCAGGGGCGCGGCCTTTGCTGACGCGAAGGCGAGACAC
TTGCTCTCCAATGGGCTGCCATGTACCTCGTTGTGTCGTCTTGTACTACA
AGGACATGCCCTGGGTGGCGATTCCATTCGAGGACGGAGATCGCAAGAAG
GCGCTCGGGCATCGCTTGGGGGTGCGCGCGATCCCCAGCCTGGTGACGGT
ATCTCCAGACGGTGAAGTCATCAACCAGACAGCCAGGGGCGCGGCCTTTG
CTGACGCGAAGGCGAGACACTTGCTCTCCAATGGGCTGCCATGTACCTCG
TTGTGTCGTCTTGGTCTCGAGTTTCCATGGTGGCCCAAGCCTGTGGAGGA
CCTCGCGGTGACCACCCAGAGCAATGGGCATCACCTGCAGGAGGTCCCCT
CCCTTATCATGTTCATGGAGGCAGCGGACGACATCGATCAAAAAGAGGTA
CCGTACGATCGAGTGTGCTGAGGTCTCGAGTTTCCATGGTGGCCCAAGCC
TGTGGAGGACCTCGCGGTGACCACCCAGAGCAATGGGCATCACCTGCAGG
AGGTCCCCTCCCTTATCATGTTCATGGAGGCAGCGGACGACATCGATCAA
AAAGAGGTACCGTACGATCGAGTGTGCTGA
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