mRNA_F-distichus_contig105442.473.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig105442.473.1 vs. uniprot
Match: D7FLF1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF1_ECTSI) HSP 1 Score: 119 bits (299), Expect = 5.750e-30 Identity = 64/89 (71.91%), Postives = 69/89 (77.53%), Query Frame = 1
Query: 4 GTRLGISRPSL-APRACRGSTVMRAEGGKVFVSGFLNSKERADQYVFDILQAQGKWEKIVVLSDSVSFAKKRLVSRKSRYSGLLDVLEF 267
GT L R L A R M A+GGKV V+GFLNSK+R DQ+VFDILQAQG+WEKIV SDSVSFAKKRLVSRKSRYSGLLDVLEF
Sbjct: 35 GTGLNNERSGLPAARQRAADIAMSADGGKVLVTGFLNSKQRTDQFVFDILQAQGRWEKIVAFSDSVSFAKKRLVSRKSRYSGLLDVLEF 123
BLAST of mRNA_F-distichus_contig105442.473.1 vs. uniprot
Match: A0A836C9Y5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y5_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.820e-22 Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 1
Query: 61 TVMRAEGGKVFVSGFLNSKERADQYVFDILQAQGKWEKIVVLSDSVSFAKKRLVSRKSRYSGLLDVLEF 267
++M +GGK+ VSGFL++KER DQ+VFD+L AQ W KIV S S +FAKKRL+SR SRYSGLLD+LEF
Sbjct: 53 SMMAGQGGKILVSGFLDAKERTDQFVFDVLHAQSSWSKIVAFSPSTAFAKKRLISRTSRYSGLLDILEF 121
BLAST of mRNA_F-distichus_contig105442.473.1 vs. uniprot
Match: A0A7S2UU40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU40_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 5.140e-16 Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 79 GGKVFVSGFLNSKERADQYVFDILQAQGKWEKIVVLSDSVSFAKKRLVSRKSRYSGLLDVLEF 267
G V VSGFL K+ DQ+VFD+L QG W+KIV S V+ AKKRL+SR+SRYSGL DVL+F
Sbjct: 82 GESVLVSGFLKDKDSTDQFVFDVLHDQGVWKKIVACSSDVASAKKRLISRQSRYSGLSDVLDF 144
BLAST of mRNA_F-distichus_contig105442.473.1 vs. uniprot
Match: A0A7R9U5M8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5M8_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 2.110e-14 Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 79 GGKVFVSGFLNSKERADQYVFDILQAQGKWEKIVVLSDSVSFAKKRLVSRKSRYSGLLDVLEF 267
GG + VSGFL+ ER DQ++FDIL A W +I+ L+ + AKKRL+SR +RY+GLLDVL+F
Sbjct: 80 GGSILVSGFLDDAERDDQFIFDILHAPRSWNQIIALNADNASAKKRLISRSARYTGLLDVLKF 142
BLAST of mRNA_F-distichus_contig105442.473.1 vs. uniprot
Match: A0A7S1UKI3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKI3_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 9.540e-14 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 1
Query: 22 SRPSLAPRACRGSTVMRAEGGKVFVSGFLNSKERADQYVFDILQAQGKWEKIVVLSDSVSFAKKRLVSRKSRYSGLLDVLEF 267
S+P+ + G+TV GG V VSGFL+ R DQ++FDIL W KI+ + + AKKRL+SR +RY+GLLDVL F
Sbjct: 34 SQPAESSAFLEGATV-DLSGGTVLVSGFLDDTARDDQFIFDILHTPKSWAKIIAFNADSASAKKRLISRSARYTGLLDVLNF 114
BLAST of mRNA_F-distichus_contig105442.473.1 vs. uniprot
Match: A0A7S0FLQ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FLQ0_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 4.320e-13 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 82 GKVFVSGFLNSKERADQYVFDIL---QAQGKWEKIVVLSDSVSFAKKRLVSRKSRYSGLLDVLEF 267
G+V VSG++ SKER DQ+VFD+L +A ++ IV D FAKKRL+SR +RY+GLLD LEF
Sbjct: 38 GRVLVSGYVQSKERTDQFVFDMLNHEEAAFNFDAIVAFVDDEKFAKKRLLSRHARYTGLLDKLEF 102
BLAST of mRNA_F-distichus_contig105442.473.1 vs. uniprot
Match: A0A1E7F665_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F665_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.700e-12 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 82 GKVFVSGFLNSKERADQYVFDILQAQG---KWEKIVVLSDSVSFAKKRLVSRKSRYSGLLDVLEF 267
G + VSG++N KER DQY+FD++ + +++KIV + FAKKRL+SR SRYSGLLD L+F
Sbjct: 91 GTIMVSGYVNEKERTDQYIFDLINHEDSAFEFKKIVAFVNDAKFAKKRLLSRSSRYSGLLDKLDF 155
BLAST of mRNA_F-distichus_contig105442.473.1 vs. uniprot
Match: A0A7S2W0X2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0X2_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.310e-12 Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 1
Query: 34 LAPRACRGSTVMRAEG--------GKVFVSGFLNSKERADQYVFDILQAQGKWEKIVVLSDSVSFAKKRLVSRKSRYSGLLDVLEF 267
LAP + R + V A G + VSGF++S++R D + FD L G +EKI+ S +FAKKRL+ R +RY+GLLDVL+F
Sbjct: 38 LAPPSSRSALVRSAAPESGEATVKGSILVSGFISSQDRTDSFGFDALNKLGIFEKIIAYSTDSAFAKKRLIGRNARYTGLLDVLDF 123
BLAST of mRNA_F-distichus_contig105442.473.1 vs. uniprot
Match: A0A7R9WJL5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WJL5_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.090e-11 Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 82 GKVFVSGFLNSKERADQYVFDILQAQGK---WEKIVVLSDSVSFAKKRLVSRKSRYSGLLDVLEF 267
G V VSG++ SKER DQ VFD L A+ + KIV D VSFAKKRL+ R +RY+GLLD L+F
Sbjct: 90 GTVLVSGWVRSKERTDQEVFDFLNAEESAFGFSKIVAFVDDVSFAKKRLLGRHARYTGLLDKLDF 154
BLAST of mRNA_F-distichus_contig105442.473.1 vs. uniprot
Match: A0A7S0CED9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CED9_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 1.510e-11 Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 1
Query: 82 GKVFVSGFLNSKERADQYVFDIL---QAQGKWEKIVVLSDSVSFAKKRLVSRKSRYSGLLDVLE 264
G V VSG++NSKER+DQ VFD+L ++ K+ KI+ D FAKKRL+SR +RYSGLLD L+
Sbjct: 106 GTVLVSGWVNSKERSDQTVFDMLNDEESPFKFSKIIAFVDDEKFAKKRLLSRSARYSGLLDKLD 169 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105442.473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig105442.473.1 >prot_F-distichus_contig105442.473.1 ID=prot_F-distichus_contig105442.473.1|Name=mRNA_F-distichus_contig105442.473.1|organism=Fucus distichus monoicous|type=polypeptide|length=89bp CGTRLGISRPSLAPRACRGSTVMRAEGGKVFVSGFLNSKERADQYVFDILback to top mRNA from alignment at F-distichus_contig105442:1..267- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig105442.473.1 ID=mRNA_F-distichus_contig105442.473.1|Name=mRNA_F-distichus_contig105442.473.1|organism=Fucus distichus monoicous|type=mRNA|length=267bp|location=Sequence derived from alignment at F-distichus_contig105442:1..267- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig105442:1..267- >mRNA_F-distichus_contig105442.473.1 ID=mRNA_F-distichus_contig105442.473.1|Name=mRNA_F-distichus_contig105442.473.1|organism=Fucus distichus monoicous|type=CDS|length=534bp|location=Sequence derived from alignment at F-distichus_contig105442:1..267- (Fucus distichus monoicous)back to top |