mRNA_F-distichus_contig10541.468.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10541.468.1 vs. uniprot
Match: D7FRF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF6_ECTSI) HSP 1 Score: 217 bits (552), Expect = 5.880e-70 Identity = 104/138 (75.36%), Postives = 117/138 (84.78%), Query Frame = 1
Query: 1 MAHFRSVNSAHFSPSGEWMVTVGQDDKLRLYRDLALASGPKVMRRFSLLTHNNQTGRWITKFQASWDPKSRGLFAIGSMQKNPHGIHLYSVDGAKDKKPSAVEIRGGDFMASIQSIVAFHPSKDVLAGANSSGRVHVF 414
+ HFRSVNSAHFSP+GEWM TV QDDK+RLY+DL ASG +V +L HNNQTGRW+TKFQASWDPKS+GLFAIGSMQK PHGIHLYSV+G KKPSAVE+ GGD M SIQS+VAFHPS+DVLAG NSSGR H+F
Sbjct: 41 LPHFRSVNSAHFSPTGEWMATVCQDDKIRLYQDLGSASGKQVSAS-QVLPHNNQTGRWLTKFQASWDPKSKGLFAIGSMQKYPHGIHLYSVNGGA-KKPSAVEVTGGDVMGSIQSVVAFHPSRDVLAGVNSSGRAHIF 176
BLAST of mRNA_F-distichus_contig10541.468.1 vs. uniprot
Match: A0A836C879_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C879_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.040e-42 Identity = 73/140 (52.14%), Postives = 92/140 (65.71%), Query Frame = 1
Query: 1 MAHFRSVNSAHFSPSGEWMVTVGQDDKLRLYRDLALASGPKVMRRFSLLTHNNQTGRWITKFQASWDPKSRGLFAIGSMQKNPHGIHLYSVDGAK-DKKPSAVEIRGGDFMASIQSIVAFHPSKDVLAGANSSGRVHVFQ 417
+ H RSVNSAHF+P+G ++VT QDD+L LY LA A+ + HNNQTGRW+TKFQA WDPK+ LF GSM K PHGI ++ A K P A + GG+ M SIQS+VA HP ++AG N+SGR HVF+
Sbjct: 33 LPHARSVNSAHFAPAGAYLVTTCQDDRLHLYDTLAFAAALG-----ESIAHNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGIDAFNATAAAAGKPPIATRLEGGEVMTSIQSVVACHPRLPLVAGINASGRCHVFR 167
BLAST of mRNA_F-distichus_contig10541.468.1 vs. uniprot
Match: A0A7S2V743_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V743_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.810e-31 Identity = 59/135 (43.70%), Postives = 87/135 (64.44%), Query Frame = 1
Query: 13 RSVNSAHFSPSGEWMVTVGQDDKLRLYRDLALASGPKVMRRFSLLTHNNQTGRWITKFQASWDPKSRGLFAIGSMQKNPHG-IHLYSVDGAKDKKPSAVEIRGGDFMASIQSIVAFHPSKDVLAGANSSGRVHVF 414
RSVN A++SPSG W+ +V QD+++ L+ LAS M+ S + H+N TGRW+TKF ASWDP+ FA+G M K+P+ I +++ D P + ++M SIQS+ FH + +V+AG NSSGRVH++
Sbjct: 14 RSVNCAYYSPSGSWVASVSQDNRICLFSSPHLASTAS-MKPESTIKHDNHTGRWLTKFHASWDPRGPDTFAMGCMMKDPYRRIEVFAAD---TPNPLIATLHSEEYMNSIQSLNVFHDTLNVVAGVNSSGRVHLY 144
BLAST of mRNA_F-distichus_contig10541.468.1 vs. uniprot
Match: A0A8B9BPR7_9AVES (WD repeat-containing protein 76 n=2 Tax=Anser TaxID=8842 RepID=A0A8B9BPR7_9AVES) HSP 1 Score: 110 bits (275), Expect = 3.970e-26 Identity = 61/138 (44.20%), Postives = 85/138 (61.59%), Query Frame = 1
Query: 7 HFRSVNSAHFSP-SGEWMVTVGQDDKLRLYRDLALASGPKVMRRFSLLTHNNQTGRWITKFQASWDPKSRGLFAIGSMQKNPHGIHLYSVDGAKDKKPSAVEIRGGDFMASIQSIVAFHPSKDVLAGANSSGRVHVFQ 417
H +SV SA+FSP +G +VTV DDKLR+Y +L+S V+ S + HNN TGRW+T+F+A WDPK F +GSM + P I +Y +D D++ S+ SI HPS+++L G NSSGR+HVF+
Sbjct: 256 HTKSVASAYFSPVTGNRVVTVCADDKLRVYDTSSLSSTVAVL---STVRHNNNTGRWLTRFRAIWDPKQEDCFVVGSMAR-PRQIEVY-----QDTGKLLHSFYNVDYLGSVCSINVVHPSRNILVGGNSSGRLHVFK 384
BLAST of mRNA_F-distichus_contig10541.468.1 vs. uniprot
Match: UPI001B7DAC98 (WD repeat-containing protein 76 n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7DAC98) HSP 1 Score: 111 bits (278), Expect = 6.250e-26 Identity = 61/137 (44.53%), Postives = 88/137 (64.23%), Query Frame = 1
Query: 7 HFRSVNSAHFSP-SGEWMVTVGQDDKLRLYRDLALASGPKVMRRFSLLTHNNQTGRWITKFQASWDPKSRGLFAIGSMQKNPHGIHLYSVDGAKDKKPSAVEIRGGDFMASIQSIVAFHPSKDVLAGANSSGRVHVF 414
H ++VNSA+FSP +G +VT+G DD++R++ A+ PK+ S++ HNN TGRW+TKF+A WDPK +F +GSM + P I + G K E R +++ S+ SI HP+K+VL G NSSGR+HVF
Sbjct: 439 HRKNVNSAYFSPVTGNRVVTIGLDDRIRIFDTSAII--PKIPVVASII-HNNFTGRWLTKFRAVWDPKREDVFVVGSMTR-PRQIEAFHNTGYK-----VHEFRDAEWLGSVCSINVMHPTKNVLVGGNSSGRLHVF 566
BLAST of mRNA_F-distichus_contig10541.468.1 vs. uniprot
Match: A0A8D0EN46_STROC (WD repeat-containing protein 76 n=2 Tax=Strigidae TaxID=30459 RepID=A0A8D0EN46_STROC) HSP 1 Score: 110 bits (274), Expect = 1.310e-25 Identity = 63/138 (45.65%), Postives = 85/138 (61.59%), Query Frame = 1
Query: 7 HFRSVNSAHFSP-SGEWMVTVGQDDKLRLYRDLALASGPKVMRRFSLLTHNNQTGRWITKFQASWDPKSRGLFAIGSMQKNPHGIHLYSVDGAKDKKPSAVEIRGGDFMASIQSIVAFHPSKDVLAGANSSGRVHVFQ 417
H +SV SA+FSP +G +VTV DDKLR+Y +L+S V+ S + HNN TGRW+T+FQA WDPK F +GSM + P I ++ G S + D + S+ SI HPSK++L G NSSGR+HVF+
Sbjct: 342 HTKSVASAYFSPVTGSRVVTVCADDKLRVYDTSSLSSTAAVL---STVRHNNNTGRWLTRFQAIWDPKREDCFVVGSMAR-PRQIEVFQDTGKLLHSFSNL-----DCLGSVCSINVVHPSKNILVGGNSSGRLHVFK 470
BLAST of mRNA_F-distichus_contig10541.468.1 vs. uniprot
Match: A0A8C8VE13_9SAUR (WD repeat-containing protein 76 n=1 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8VE13_9SAUR) HSP 1 Score: 109 bits (272), Expect = 1.330e-25 Identity = 59/138 (42.75%), Postives = 88/138 (63.77%), Query Frame = 1
Query: 7 HFRSVNSAHFSP-SGEWMVTVGQDDKLRLYRDLALASGPKVMRRFSLLTHNNQTGRWITKFQASWDPKSRGLFAIGSMQKNPHGIHLYSVDGAKDKKPSAVEIRGGDFMASIQSIVAFHPSKDVLAGANSSGRVHVFQ 417
H +SV SA+FSP +G+ +VT DDKLR+Y +L+S V+ + + HNN TGRW+T+F+A WDPK +GSM + P I ++ G ++ S + D++ S+ SI A HP+K++L G NSSGR+HVF+
Sbjct: 275 HTKSVASAYFSPITGDKVVTTCADDKLRVYETSSLSSTIPVL---TAIKHNNNTGRWLTRFRAIWDPKQEDCIVVGSMAR-PRQIEVFQATG--EQLHSFYNV---DYLGSVCSINAMHPTKNILVGGNSSGRLHVFK 403
BLAST of mRNA_F-distichus_contig10541.468.1 vs. uniprot
Match: UPI0005212DBF (WD repeat-containing protein 76 n=1 Tax=Charadrius vociferus TaxID=50402 RepID=UPI0005212DBF) HSP 1 Score: 108 bits (271), Expect = 1.590e-25 Identity = 61/138 (44.20%), Postives = 85/138 (61.59%), Query Frame = 1
Query: 7 HFRSVNSAHFSP-SGEWMVTVGQDDKLRLYRDLALASGPKVMRRFSLLTHNNQTGRWITKFQASWDPKSRGLFAIGSMQKNPHGIHLYSVDGAKDKKPSAVEIRGGDFMASIQSIVAFHPSKDVLAGANSSGRVHVFQ 417
H RSV SA+FSP +G +VTV DDKLR+Y +L+S V+ S + HN+ TGRW+T+F+A WDPK F +GSM + P I ++ +D D ++S+ SI HPSK++L G NSSGR+HVF+
Sbjct: 262 HTRSVASAYFSPVTGNRVVTVCADDKLRVYDTTSLSSAVAVL---STIRHNSNTGRWLTRFRAIWDPKQEDCFVVGSMAR-PRQIQVF-----QDTGKLLHSFYNLDCLSSVCSINVVHPSKNILVGGNSSGRLHVFK 390
BLAST of mRNA_F-distichus_contig10541.468.1 vs. uniprot
Match: UPI0009A404AF (WD repeat-containing protein 76 n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A404AF) HSP 1 Score: 110 bits (275), Expect = 1.630e-25 Identity = 60/137 (43.80%), Postives = 90/137 (65.69%), Query Frame = 1
Query: 7 HFRSVNSAHFSP-SGEWMVTVGQDDKLRLYRDLALASGPKVMRRFSLLTHNNQTGRWITKFQASWDPKSRGLFAIGSMQKNPHGIHLYSVDGAKDKKPSAVEIRGGDFMASIQSIVAFHPSKDVLAGANSSGRVHVF 414
H ++VNSA+FSP +G +VTV DD++R++ A+ P++ S++ HNN TGRW+TKF+A WDPK F +GSM + P I ++ V G+K + E R +++ SI SI HP++++L G NSSGR+HVF
Sbjct: 442 HTKNVNSAYFSPVTGNNVVTVCMDDRIRIFDTSAII--PRIPVVTSII-HNNFTGRWLTKFRAVWDPKRDDCFIVGSMAR-PRQIEVFHVTGSKVR-----EFRDAEWLGSICSINVMHPTRNILVGGNSSGRLHVF 569
BLAST of mRNA_F-distichus_contig10541.468.1 vs. uniprot
Match: A0A8B9BQ63_9AVES (WD repeat-containing protein 76 n=1 Tax=Anser brachyrhynchus TaxID=132585 RepID=A0A8B9BQ63_9AVES) HSP 1 Score: 110 bits (275), Expect = 1.680e-25 Identity = 61/138 (44.20%), Postives = 85/138 (61.59%), Query Frame = 1
Query: 7 HFRSVNSAHFSP-SGEWMVTVGQDDKLRLYRDLALASGPKVMRRFSLLTHNNQTGRWITKFQASWDPKSRGLFAIGSMQKNPHGIHLYSVDGAKDKKPSAVEIRGGDFMASIQSIVAFHPSKDVLAGANSSGRVHVFQ 417
H +SV SA+FSP +G +VTV DDKLR+Y +L+S V+ S + HNN TGRW+T+F+A WDPK F +GSM + P I +Y +D D++ S+ SI HPS+++L G NSSGR+HVF+
Sbjct: 457 HTKSVASAYFSPVTGNRVVTVCADDKLRVYDTSSLSSTVAVL---STVRHNNNTGRWLTRFRAIWDPKQEDCFVVGSMAR-PRQIEVY-----QDTGKLLHSFYNVDYLGSVCSINVVHPSRNILVGGNSSGRLHVFK 585 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10541.468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10541.468.1 >prot_F-distichus_contig10541.468.1 ID=prot_F-distichus_contig10541.468.1|Name=mRNA_F-distichus_contig10541.468.1|organism=Fucus distichus monoicous|type=polypeptide|length=140bp MAHFRSVNSAHFSPSGEWMVTVGQDDKLRLYRDLALASGPKVMRRFSLLTback to top mRNA from alignment at F-distichus_contig10541:7396..8557- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10541.468.1 ID=mRNA_F-distichus_contig10541.468.1|Name=mRNA_F-distichus_contig10541.468.1|organism=Fucus distichus monoicous|type=mRNA|length=1162bp|location=Sequence derived from alignment at F-distichus_contig10541:7396..8557- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10541:7396..8557- >mRNA_F-distichus_contig10541.468.1 ID=mRNA_F-distichus_contig10541.468.1|Name=mRNA_F-distichus_contig10541.468.1|organism=Fucus distichus monoicous|type=CDS|length=840bp|location=Sequence derived from alignment at F-distichus_contig10541:7396..8557- (Fucus distichus monoicous)back to top |