mRNA_F-distichus_contig105399.466.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig105399.466.1
Unique NamemRNA_F-distichus_contig105399.466.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
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BLAST of mRNA_F-distichus_contig105399.466.1 vs. uniprot
Match: D8LEJ8_ECTSI (Glycerol kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEJ8_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 1.520e-30
Identity = 57/68 (83.82%), Postives = 64/68 (94.12%), Query Frame = 1 
Query:    1 KMIKTAPEIEDLARSVKDNGGVYFVPAFAGLLAPHWRGDARGLMCGLTAFNTRGHVARAVLESTAFQV 204
            +MIK+A EIE LAR+V+DNGGV+FVPAFAGLLAPHWRGDARGLMCGLTA+NT+ HV RAVLESTAFQV
Sbjct:  350 EMIKSASEIEALARTVEDNGGVFFVPAFAGLLAPHWRGDARGLMCGLTAYNTKAHVVRAVLESTAFQV 417
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BLAST of mRNA_F-distichus_contig105399.466.1 vs. uniprot
Match: A0A2D4CCV4_PYTIN (Glycerol kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCV4_PYTIN)

HSP 1 Score: 110 bits (274), Expect = 1.070e-26
Identity = 51/67 (76.12%), Postives = 58/67 (86.57%), Query Frame = 1 
Query:    1 KMIKTAPEIEDLARSVKDNGGVYFVPAFAGLLAPHWRGDARGLMCGLTAFNTRGHVARAVLESTAFQ 201
            KMIK+APE+E LAR VKDNGGVY VPAF+GL APHWR DARG++ GLTA+ TR H+ARA LESTAFQ
Sbjct:  328 KMIKSAPEVETLAREVKDNGGVYLVPAFSGLFAPHWRDDARGVLVGLTAYATREHIARAALESTAFQ 394
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BLAST of mRNA_F-distichus_contig105399.466.1 vs. uniprot
Match: UPI001BD7FC6B (FGGY-family carbohydrate kinase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI001BD7FC6B)

HSP 1 Score: 102 bits (253), Expect = 5.210e-26
Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 1 
Query:    1 KMIKTAPEIEDLARSVKDNGGVYFVPAFAGLLAPHWRGDARGLMCGLTAFNTRGHVARAVLESTAFQ 201
            KM +TAP+IE LA +V+DNGG YFVPAF+GL AP+WR DARG + GLT +  RGH+ARAVLESTAFQ
Sbjct:   19 KMFETAPQIEALANTVEDNGGAYFVPAFSGLFAPYWRPDARGTLVGLTRYVNRGHIARAVLESTAFQ 85
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BLAST of mRNA_F-distichus_contig105399.466.1 vs. uniprot
Match: UPI00141DA0D6 (glycerol kinase GlpK n=1 Tax=Brooklawnia cerclae TaxID=349934 RepID=UPI00141DA0D6)

HSP 1 Score: 108 bits (269), Expect = 5.270e-26
Identity = 49/67 (73.13%), Postives = 60/67 (89.55%), Query Frame = 1 
Query:    1 KMIKTAPEIEDLARSVKDNGGVYFVPAFAGLLAPHWRGDARGLMCGLTAFNTRGHVARAVLESTAFQ 201
            KMI++APEIE+LA +V+DNGGVYFVPAF+GL AP+WR DARG + GLT +N RGH+ARAVLE+TAFQ
Sbjct:  325 KMIESAPEIEELAATVEDNGGVYFVPAFSGLFAPYWRDDARGAIVGLTRYNNRGHIARAVLEATAFQ 391
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BLAST of mRNA_F-distichus_contig105399.466.1 vs. uniprot
Match: A0A7W1V284_9ACTN (Glycerol kinase n=3 Tax=Propionibacteriales TaxID=85009 RepID=A0A7W1V284_9ACTN)

HSP 1 Score: 107 bits (268), Expect = 7.230e-26
Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 1 
Query:    4 MIKTAPEIEDLARSVKDNGGVYFVPAFAGLLAPHWRGDARGLMCGLTAFNTRGHVARAVLESTAFQ 201
            +IKTAPEIEDLA SV DNGG YFVPAF+GL APHWR DARG + GLT F  +GH+ARAVLE+TAFQ
Sbjct:  325 IIKTAPEIEDLAASVDDNGGAYFVPAFSGLFAPHWRSDARGALVGLTRFVNKGHIARAVLEATAFQ 390
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BLAST of mRNA_F-distichus_contig105399.466.1 vs. uniprot
Match: I4F5J4_9ACTN (Glycerol kinase n=17 Tax=Geodermatophilaceae TaxID=85030 RepID=I4F5J4_9ACTN)

HSP 1 Score: 106 bits (265), Expect = 1.900e-25
Identity = 50/67 (74.63%), Postives = 56/67 (83.58%), Query Frame = 1 
Query:    1 KMIKTAPEIEDLARSVKDNGGVYFVPAFAGLLAPHWRGDARGLMCGLTAFNTRGHVARAVLESTAFQ 201
            KMI +APEIEDLAR V DNGG YFVPAF+GL APHWR DARG + GLT F  RGH+ARAVLE+TA+Q
Sbjct:  324 KMISSAPEIEDLAREVDDNGGSYFVPAFSGLFAPHWRSDARGAVVGLTRFVNRGHLARAVLEATAYQ 390
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BLAST of mRNA_F-distichus_contig105399.466.1 vs. uniprot
Match: A0A365ZXM0_9ACTN (Glycerol kinase n=3 Tax=Streptomyces TaxID=1883 RepID=A0A365ZXM0_9ACTN)

HSP 1 Score: 106 bits (265), Expect = 1.920e-25
Identity = 48/66 (72.73%), Postives = 58/66 (87.88%), Query Frame = 1 
Query:    4 MIKTAPEIEDLARSVKDNGGVYFVPAFAGLLAPHWRGDARGLMCGLTAFNTRGHVARAVLESTAFQ 201
            +IKTAPEIEDLAR+V DNGG YFVPAF+GL APHWR DARG++ GLT + T+ H+ARAVLE+TA+Q
Sbjct:  329 LIKTAPEIEDLARTVDDNGGAYFVPAFSGLFAPHWRADARGVIAGLTRYVTKAHIARAVLEATAWQ 394
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BLAST of mRNA_F-distichus_contig105399.466.1 vs. uniprot
Match: A0A095WUY0_9ACTO (Glycerol kinase n=4 Tax=Actinomyces TaxID=1654 RepID=A0A095WUY0_9ACTO)

HSP 1 Score: 106 bits (265), Expect = 1.920e-25
Identity = 49/66 (74.24%), Postives = 58/66 (87.88%), Query Frame = 1 
Query:    4 MIKTAPEIEDLARSVKDNGGVYFVPAFAGLLAPHWRGDARGLMCGLTAFNTRGHVARAVLESTAFQ 201
            MI TAPEIE LA+SVKDNGGVYFVPAF+GL AP+W+ +ARG + GLT +NT GH+ARAVLE+TAFQ
Sbjct:  326 MIHTAPEIEPLAKSVKDNGGVYFVPAFSGLFAPYWKDEARGAIVGLTRYNTAGHIARAVLEATAFQ 391
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BLAST of mRNA_F-distichus_contig105399.466.1 vs. uniprot
Match: A0A2N6UMC7_9ACTO (Glycerol kinase n=1 Tax=Gleimia hominis TaxID=595468 RepID=A0A2N6UMC7_9ACTO)

HSP 1 Score: 106 bits (265), Expect = 1.950e-25
Identity = 50/67 (74.63%), Postives = 57/67 (85.07%), Query Frame = 1 
Query:    1 KMIKTAPEIEDLARSVKDNGGVYFVPAFAGLLAPHWRGDARGLMCGLTAFNTRGHVARAVLESTAFQ 201
            KMI +APEIE LA SVKDNGGVYFVPAF+GL AP+W+ DARG + GLT FN  GH+ARAVLE+TAFQ
Sbjct:  326 KMISSAPEIEGLANSVKDNGGVYFVPAFSGLFAPYWKDDARGAIVGLTRFNNAGHLARAVLEATAFQ 392
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BLAST of mRNA_F-distichus_contig105399.466.1 vs. uniprot
Match: UPI001E31B337 (glycerol kinase GlpK n=1 Tax=Corynebacterium cyclohexanicum TaxID=322009 RepID=UPI001E31B337)

HSP 1 Score: 106 bits (264), Expect = 2.560e-25
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 1 
Query:    4 MIKTAPEIEDLARSVKDNGGVYFVPAFAGLLAPHWRGDARGLMCGLTAFNTRGHVARAVLESTAFQ 201
            +I +APE+EDLARSVKDNGGVY VPAF+GL APHWR DARG + GLT +  RGH+ARA LE+TAFQ
Sbjct:  319 LITSAPEVEDLARSVKDNGGVYIVPAFSGLFAPHWRSDARGAIVGLTRYANRGHIARAALEATAFQ 384
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105399.466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEJ8_ECTSI1.520e-3083.82Glycerol kinase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A2D4CCV4_PYTIN1.070e-2676.12Glycerol kinase n=1 Tax=Pythium insidiosum TaxID=1... [more]
UPI001BD7FC6B5.210e-2670.15FGGY-family carbohydrate kinase n=2 Tax=Gammaprote... [more]
UPI00141DA0D65.270e-2673.13glycerol kinase GlpK n=1 Tax=Brooklawnia cerclae T... [more]
A0A7W1V284_9ACTN7.230e-2675.76Glycerol kinase n=3 Tax=Propionibacteriales TaxID=... [more]
I4F5J4_9ACTN1.900e-2574.63Glycerol kinase n=17 Tax=Geodermatophilaceae TaxID... [more]
A0A365ZXM0_9ACTN1.920e-2572.73Glycerol kinase n=3 Tax=Streptomyces TaxID=1883 Re... [more]
A0A095WUY0_9ACTO1.920e-2574.24Glycerol kinase n=4 Tax=Actinomyces TaxID=1654 Rep... [more]
A0A2N6UMC7_9ACTO1.950e-2574.63Glycerol kinase n=1 Tax=Gleimia hominis TaxID=5954... [more]
UPI001E31B3372.560e-2572.73glycerol kinase GlpK n=1 Tax=Corynebacterium cyclo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig105399contigF-distichus_contig105399:411..617 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score122.9
Seed ortholog evalue5.9e-26
Seed eggNOG ortholog2880.D8LEJ8
KEGG rclassRC00002,RC00017
KEGG koko:K00864
KEGG ReactionR00847
KEGG Pathwayko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004370,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005975,GO:0006066,GO:0006071,GO:0006072,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006793,GO:0006796,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009058,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019405,GO:0019563,GO:0019637,GO:0019751,GO:0033554,GO:0042802,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044255,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046164,GO:0046167,GO:0046174,GO:0046486,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0052646,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901575,GO:1901576,GO:1901615,GO:1901616
EggNOG free text desc.glycerol kinase activity
EggNOG OGsCOG0554@1,KOG2517@2759
EC2.7.1.30
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04147
Exons1
Model size207
Cds size204
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928979.4761558-UTR-F-distichus_contig105399:410..4131622928979.4761558-UTR-F-distichus_contig105399:410..413Fucus distichus monoicousUTRF-distichus_contig105399 411..413 +
1690885089.431438-UTR-F-distichus_contig105399:410..4131690885089.431438-UTR-F-distichus_contig105399:410..413Fucus distichus monoicousUTRF-distichus_contig105399 411..413 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928979.488057-CDS-F-distichus_contig105399:413..6171622928979.488057-CDS-F-distichus_contig105399:413..617Fucus distichus monoicousCDSF-distichus_contig105399 414..617 +
1690885089.4474375-CDS-F-distichus_contig105399:413..6171690885089.4474375-CDS-F-distichus_contig105399:413..617Fucus distichus monoicousCDSF-distichus_contig105399 414..617 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig105399.466.1prot_F-distichus_contig105399.466.1Fucus distichus monoicouspolypeptideF-distichus_contig105399 414..617 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig105399.466.1

>prot_F-distichus_contig105399.466.1 ID=prot_F-distichus_contig105399.466.1|Name=mRNA_F-distichus_contig105399.466.1|organism=Fucus distichus monoicous|type=polypeptide|length=68bp
MIKTAPEIEDLARSVKDNGGVYFVPAFAGLLAPHWRGDARGLMCGLTAFN
TRGHVARAVLESTAFQV*
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mRNA from alignment at F-distichus_contig105399:411..617+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig105399.466.1 ID=mRNA_F-distichus_contig105399.466.1|Name=mRNA_F-distichus_contig105399.466.1|organism=Fucus distichus monoicous|type=mRNA|length=207bp|location=Sequence derived from alignment at F-distichus_contig105399:411..617+ (Fucus distichus monoicous)
AAGATGATCAAGACCGCGCCCGAAATCGAGGACCTGGCCCGTTCCGTCAA
GGACAACGGAGGCGTGTACTTCGTGCCAGCCTTCGCGGGGCTGCTGGCGC
CTCACTGGCGGGGGGACGCTCGAGGGCTAATGTGTGGACTAACGGCCTTC
AACACCAGGGGCCACGTGGCGAGGGCCGTTCTCGAGTCTACCGCCTTCCA
GGTATAA
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Coding sequence (CDS) from alignment at F-distichus_contig105399:411..617+

>mRNA_F-distichus_contig105399.466.1 ID=mRNA_F-distichus_contig105399.466.1|Name=mRNA_F-distichus_contig105399.466.1|organism=Fucus distichus monoicous|type=CDS|length=408bp|location=Sequence derived from alignment at F-distichus_contig105399:411..617+ (Fucus distichus monoicous)
ATGATCAAGACCGCGCCCGAAATCGAGGACCTGGCCCGTTCCGTCAAGGA
CAACGGAGGCGTGTACTTCGTGCCAGCCTTCGCGGGGCTGCTGGCGCCTC
ACTGGCGGGGGGACGCTCGAGGGCTAATGTGTGGACTAACGGCCTTCAAC
ACCAGGGGCCACGTGGCGAGGGCCGTTCTCGAGTCTACCGCCTTCCAGGT
ATAAATGATCAAGACCGCGCCCGAAATCGAGGACCTGGCCCGTTCCGTCA
AGGACAACGGAGGCGTGTACTTCGTGCCAGCCTTCGCGGGGCTGCTGGCG
CCTCACTGGCGGGGGGACGCTCGAGGGCTAATGTGTGGACTAACGGCCTT
CAACACCAGGGGCCACGTGGCGAGGGCCGTTCTCGAGTCTACCGCCTTCC
AGGTATAA
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