mRNA_F-distichus_contig105367.464.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig105367.464.1 vs. uniprot
Match: I0YLH9_COCSC (UBC-like protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YLH9_COCSC) HSP 1 Score: 127 bits (319), Expect = 6.790e-36 Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 1
Query: 7 GCFEFDIILPPDYPNRPPQVHFLTTGRGRIRFNPNLYNTGKVCLSLLGTWSGPGWDPKTSTLLQV 201
GCF FDI+LPP+YPN+PP+V FLTTG GR+RFNPNLYN GKVCLSLLGTWSGP WDP TSTLLQV
Sbjct: 15 GCFLFDILLPPEYPNKPPEVQFLTTGAGRVRFNPNLYNCGKVCLSLLGTWSGPSWDPGTSTLLQV 79
BLAST of mRNA_F-distichus_contig105367.464.1 vs. uniprot
Match: D7G0A1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0A1_ECTSI) HSP 1 Score: 135 bits (340), Expect = 1.900e-35 Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = 1
Query: 7 GCFEFDIILPPDYPNRPPQVHFLTTGRGRIRFNPNLYNTGKVCLSLLGTWSGPGWDPKTSTLLQV 201
GCFEFDI+LPPDYPN PP+VHFLTTG GR+RFNPNLY TGKVCLSLLGTW+GPGW+PKTSTLLQV
Sbjct: 761 GCFEFDILLPPDYPNSPPKVHFLTTGSGRVRFNPNLYQTGKVCLSLLGTWAGPGWNPKTSTLLQV 825
BLAST of mRNA_F-distichus_contig105367.464.1 vs. uniprot
Match: A0A7R9W000_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9W000_9CHLO) HSP 1 Score: 127 bits (319), Expect = 1.860e-34 Identity = 55/65 (84.62%), Postives = 57/65 (87.69%), Query Frame = 1
Query: 7 GCFEFDIILPPDYPNRPPQVHFLTTGRGRIRFNPNLYNTGKVCLSLLGTWSGPGWDPKTSTLLQV 201
G F FDI+LPPDYPN PPQVHFLTTG GR+RFNPNLYN GKVCLSLLGTWSGP W P TSTLLQV
Sbjct: 111 GAFVFDILLPPDYPNHPPQVHFLTTGEGRVRFNPNLYNCGKVCLSLLGTWSGPSWQPGTSTLLQV 175
BLAST of mRNA_F-distichus_contig105367.464.1 vs. uniprot
Match: A0A7S0N848_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N848_9CRYP) HSP 1 Score: 114 bits (284), Expect = 1.270e-30 Identity = 49/65 (75.38%), Postives = 54/65 (83.08%), Query Frame = 1
Query: 7 GCFEFDIILPPDYPNRPPQVHFLTTGRGRIRFNPNLYNTGKVCLSLLGTWSGPGWDPKTSTLLQV 201
G FEFD++LPPDYPN PPQV TTG GR+RFNPNLY G VCLSLLGTWSGPGW+P S+LLQV
Sbjct: 31 GLFEFDVLLPPDYPNVPPQVRLTTTGGGRVRFNPNLYADGTVCLSLLGTWSGPGWEPGRSSLLQV 95
BLAST of mRNA_F-distichus_contig105367.464.1 vs. uniprot
Match: A0A5J4YG42_9CHLO (UBC core domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YG42_9CHLO) HSP 1 Score: 119 bits (299), Expect = 4.340e-30 Identity = 53/65 (81.54%), Postives = 54/65 (83.08%), Query Frame = 1
Query: 7 GCFEFDIILPPDYPNRPPQVHFLTTGRGRIRFNPNLYNTGKVCLSLLGTWSGPGWDPKTSTLLQV 201
GCF FDI LP +YPN PP VHFLTTG GRIRFNPNLY GKVCLSLLGTWSGP WDP STLLQV
Sbjct: 390 GCFLFDIFLPANYPNAPPSVHFLTTGGGRIRFNPNLYECGKVCLSLLGTWSGPSWDPTHSTLLQV 454
BLAST of mRNA_F-distichus_contig105367.464.1 vs. uniprot
Match: A0A835YXY9_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXY9_9STRA) HSP 1 Score: 110 bits (276), Expect = 5.340e-30 Identity = 49/65 (75.38%), Postives = 53/65 (81.54%), Query Frame = 1
Query: 7 GCFEFDIILPPDYPNRPPQVHFLTTGRGRIRFNPNLYNTGKVCLSLLGTWSGPGWDPKTSTLLQV 201
G FEFDI LP YP P+VHFLTTG G +RFNPNLYN+GKVCLSLLGTW GPGW+P STLLQV
Sbjct: 2 GLFEFDIRLPQRYPVVAPEVHFLTTGNGSVRFNPNLYNSGKVCLSLLGTWRGPGWEPNKSTLLQV 66
BLAST of mRNA_F-distichus_contig105367.464.1 vs. uniprot
Match: A0A0L0F5W7_9EUKA (UBC core domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0F5W7_9EUKA) HSP 1 Score: 108 bits (269), Expect = 1.810e-29 Identity = 44/61 (72.13%), Postives = 50/61 (81.97%), Query Frame = 1
Query: 19 FDIILPPDYPNRPPQVHFLTTGRGRIRFNPNLYNTGKVCLSLLGTWSGPGWDPKTSTLLQV 201
FD+ LP DYP +PPQ+HF+TTG G +RFNPNLYN G VCLSLLGTW GPGW P STL+QV
Sbjct: 1 FDLYLPSDYPKKPPQLHFVTTGHGTVRFNPNLYNNGTVCLSLLGTWGGPGWKPSLSTLIQV 61
BLAST of mRNA_F-distichus_contig105367.464.1 vs. uniprot
Match: A0A2P6TCN2_CHLSO (Ubiquitin conjugating enzyme family n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TCN2_CHLSO) HSP 1 Score: 118 bits (295), Expect = 2.150e-29 Identity = 51/65 (78.46%), Postives = 54/65 (83.08%), Query Frame = 1
Query: 7 GCFEFDIILPPDYPNRPPQVHFLTTGRGRIRFNPNLYNTGKVCLSLLGTWSGPGWDPKTSTLLQV 201
G F FDI+LPPDYPNRPPQV FLTTG GR+R NPNLY GKVCLSLLGTW+GP W P STLLQV
Sbjct: 528 GAFAFDILLPPDYPNRPPQVQFLTTGGGRVRLNPNLYENGKVCLSLLGTWAGPSWQPGQSTLLQV 592
BLAST of mRNA_F-distichus_contig105367.464.1 vs. uniprot
Match: A0A2R6WNY5_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WNY5_MARPO) HSP 1 Score: 118 bits (295), Expect = 2.270e-29 Identity = 51/67 (76.12%), Postives = 56/67 (83.58%), Query Frame = 1
Query: 1 QGGCFEFDIILPPDYPNRPPQVHFLTTGRGRIRFNPNLYNTGKVCLSLLGTWSGPGWDPKTSTLLQV 201
Q G F FDI LPPDYP PP VHFLTTG G++RFNPNLY++GK+CLSLLGTWSGPGW P STLLQV
Sbjct: 698 QNGLFMFDIFLPPDYPQVPPHVHFLTTGGGKVRFNPNLYDSGKICLSLLGTWSGPGWVPGKSTLLQV 764
BLAST of mRNA_F-distichus_contig105367.464.1 vs. uniprot
Match: A0A2K1JHY5_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JHY5_PHYPA) HSP 1 Score: 117 bits (292), Expect = 5.760e-29 Identity = 51/67 (76.12%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 1 QGGCFEFDIILPPDYPNRPPQVHFLTTGRGRIRFNPNLYNTGKVCLSLLGTWSGPGWDPKTSTLLQV 201
Q G F FDI LP DYP PP VHFLTTG G++RFNPNLY+TGK+CLSLLGTWSGPGW P STLLQV
Sbjct: 701 QNGIFLFDIFLPADYPQVPPSVHFLTTGGGKVRFNPNLYDTGKICLSLLGTWSGPGWTPGKSTLLQV 767 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105367.464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig105367.464.1 >prot_F-distichus_contig105367.464.1 ID=prot_F-distichus_contig105367.464.1|Name=mRNA_F-distichus_contig105367.464.1|organism=Fucus distichus monoicous|type=polypeptide|length=67bp QGGCFEFDIILPPDYPNRPPQVHFLTTGRGRIRFNPNLYNTGKVCLSLLGback to top mRNA from alignment at F-distichus_contig105367:1226..1426+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig105367.464.1 ID=mRNA_F-distichus_contig105367.464.1|Name=mRNA_F-distichus_contig105367.464.1|organism=Fucus distichus monoicous|type=mRNA|length=201bp|location=Sequence derived from alignment at F-distichus_contig105367:1226..1426+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig105367:1226..1426+ >mRNA_F-distichus_contig105367.464.1 ID=mRNA_F-distichus_contig105367.464.1|Name=mRNA_F-distichus_contig105367.464.1|organism=Fucus distichus monoicous|type=CDS|length=402bp|location=Sequence derived from alignment at F-distichus_contig105367:1226..1426+ (Fucus distichus monoicous)back to top |