mRNA_F-distichus_contig105339.462.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig105339.462.1 vs. uniprot
Match: A0A6H5L1F6_9PHAE (Flavin_Reduct domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F6_9PHAE) HSP 1 Score: 108 bits (271), Expect = 1.210e-27 Identity = 49/58 (84.48%), Postives = 57/58 (98.28%), Query Frame = 1
Query: 4 EFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKV 177
EFVVSI+S+WFVEAANHTCG+FPPEVDEM+VAGLTP++S IV+PPR+KESAVNMECKV
Sbjct: 150 EFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKV 207
BLAST of mRNA_F-distichus_contig105339.462.1 vs. uniprot
Match: D7G8R2_ECTSI (Flavin_Reduct domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R2_ECTSI) HSP 1 Score: 106 bits (265), Expect = 3.960e-27 Identity = 48/58 (82.76%), Postives = 56/58 (96.55%), Query Frame = 1
Query: 4 EFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKV 177
EFVVSI+S+WFVEAANHTCG+ PPEVDEM+VAGLTP++S IV+PPR+KESAVNMECKV
Sbjct: 108 EFVVSIMSDWFVEAANHTCGSLPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKV 165
BLAST of mRNA_F-distichus_contig105339.462.1 vs. uniprot
Match: A0A7S0DUQ4_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DUQ4_9CRYP) HSP 1 Score: 98.6 bits (244), Expect = 9.220e-25 Identity = 42/59 (71.19%), Postives = 54/59 (91.53%), Query Frame = 1
Query: 1 REFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKV 177
+EFVV+I+SEW+ E+ANHTCGNFPPEV+EM+VAGLTPL S ++SPPRV ESA+N EC++
Sbjct: 32 KEFVVNIMSEWYAESANHTCGNFPPEVNEMDVAGLTPLPSEMISPPRVAESAINFECRL 90
BLAST of mRNA_F-distichus_contig105339.462.1 vs. uniprot
Match: L1IE62_GUITC (Flavin_Reduct domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IE62_GUITC) HSP 1 Score: 99.0 bits (245), Expect = 5.820e-24 Identity = 43/59 (72.88%), Postives = 54/59 (91.53%), Query Frame = 1
Query: 1 REFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKV 177
+EFVV+I+SEW+ E+ANHTCGNFPPEV+EM+VAGLTPL S I+SPPRV ESA+N EC++
Sbjct: 129 KEFVVNIMSEWYAESANHTCGNFPPEVNEMDVAGLTPLPSKIISPPRVAESALNFECRL 187
BLAST of mRNA_F-distichus_contig105339.462.1 vs. uniprot
Match: A0A150H2H2_GONPE (Flavin_Reduct domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H2H2_GONPE) HSP 1 Score: 95.5 bits (236), Expect = 6.450e-23 Identity = 45/58 (77.59%), Postives = 50/58 (86.21%), Query Frame = 1
Query: 4 EFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKV 177
EFVV+IISEWF EAANHTCG+FPP VDEM +AGLTPL S V PPRV ESAV+MEC+V
Sbjct: 70 EFVVNIISEWFAEAANHTCGDFPPGVDEMALAGLTPLPSTKVKPPRVAESAVHMECRV 127
BLAST of mRNA_F-distichus_contig105339.462.1 vs. uniprot
Match: A0A8J4FBD9_9CHLO (Flavin_Reduct domain-containing protein (Fragment) n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4FBD9_9CHLO) HSP 1 Score: 94.7 bits (234), Expect = 9.640e-22 Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = 1
Query: 1 REFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKV 177
REFVV+IISEWFVEAANHTCG++PP VDEM+++GL PL S V PPRV ESAV++ECK+
Sbjct: 208 REFVVNIISEWFVEAANHTCGDYPPGVDEMKLSGLNPLPSTKVKPPRVAESAVHLECKL 266
BLAST of mRNA_F-distichus_contig105339.462.1 vs. uniprot
Match: A0A5B8MV84_9CHLO (Flavin_Reduct domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MV84_9CHLO) HSP 1 Score: 92.0 bits (227), Expect = 3.800e-21 Identity = 40/59 (67.80%), Postives = 51/59 (86.44%), Query Frame = 1
Query: 1 REFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKV 177
+EF V+++SEWF+E ANHTCGN+ PEVDEM ++GLT L S+ V PPRVKESAV+MECK+
Sbjct: 148 KEFTVNVLSEWFLEQANHTCGNYDPEVDEMALSGLTKLPSLKVKPPRVKESAVHMECKL 206
BLAST of mRNA_F-distichus_contig105339.462.1 vs. uniprot
Match: A0A2J7ZSE2_9CHLO (Flavin_Reduct domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZSE2_9CHLO) HSP 1 Score: 94.0 bits (232), Expect = 4.160e-21 Identity = 43/57 (75.44%), Postives = 50/57 (87.72%), Query Frame = 1
Query: 1 REFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMEC 171
R+FVV+IISEWFVEAANHTCG++PP VDEM++AGLTPL S V PPRV ESA+ MEC
Sbjct: 27 RQFVVNIISEWFVEAANHTCGDYPPGVDEMQLAGLTPLPSTHVRPPRVAESALQMEC 83
BLAST of mRNA_F-distichus_contig105339.462.1 vs. uniprot
Match: D8UB02_VOLCA (Flavin_Reduct domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UB02_VOLCA) HSP 1 Score: 93.2 bits (230), Expect = 9.800e-21 Identity = 42/59 (71.19%), Postives = 51/59 (86.44%), Query Frame = 1
Query: 1 REFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKV 177
REFVV++ISEWFVEAANHTCG++PP VDEM +AGL P+ S V PPRV ESAV++EC+V
Sbjct: 728 REFVVNVISEWFVEAANHTCGDYPPGVDEMRLAGLHPMPSTKVRPPRVAESAVHLECRV 786
BLAST of mRNA_F-distichus_contig105339.462.1 vs. uniprot
Match: A0A7S1HEZ1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HEZ1_HEMAN) HSP 1 Score: 90.5 bits (223), Expect = 1.300e-20 Identity = 39/58 (67.24%), Postives = 52/58 (89.66%), Query Frame = 1
Query: 4 EFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKESAVNMECKV 177
EFVV+I+S+WF+EAANHTCG+F PE +EM++AGLTPL S++V PPRV ESA +MEC++
Sbjct: 143 EFVVNIMSDWFIEAANHTCGDFVPEDNEMDLAGLTPLPSVVVKPPRVGESAFHMECRL 200 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105339.462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig105339.462.1 >prot_F-distichus_contig105339.462.1 ID=prot_F-distichus_contig105339.462.1|Name=mRNA_F-distichus_contig105339.462.1|organism=Fucus distichus monoicous|type=polypeptide|length=59bp REFVVSIISEWFVEAANHTCGNFPPEVDEMEVAGLTPLESIIVSPPRVKEback to top mRNA from alignment at F-distichus_contig105339:1439..1615- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig105339.462.1 ID=mRNA_F-distichus_contig105339.462.1|Name=mRNA_F-distichus_contig105339.462.1|organism=Fucus distichus monoicous|type=mRNA|length=177bp|location=Sequence derived from alignment at F-distichus_contig105339:1439..1615- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig105339:1439..1615- >mRNA_F-distichus_contig105339.462.1 ID=mRNA_F-distichus_contig105339.462.1|Name=mRNA_F-distichus_contig105339.462.1|organism=Fucus distichus monoicous|type=CDS|length=354bp|location=Sequence derived from alignment at F-distichus_contig105339:1439..1615- (Fucus distichus monoicous)back to top |