mRNA_F-distichus_contig10525.457.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10525.457.1 vs. uniprot
Match: D7G1I1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G1I1_ECTSI) HSP 1 Score: 276 bits (707), Expect = 9.230e-87 Identity = 150/263 (57.03%), Postives = 176/263 (66.92%), Query Frame = 1
Query: 169 KPDLSYLPAFNNVGGRPDERQETRGSFTPGVLIMSGGKRRDVPLEAKINPGEVIFVSDTLEPDLSGRTRTNALRKTERLGVRGGFAPGVKVFSGGVRRDHALKVHNNPGLVLFSSCNLEPDISVEARTKLLRPAERFGSRGRFTRGIRHWRGGSPRDVPVKAKIDHGEVL--AVSSRLKPDLSWGGETNVLGGRGGERLGRMGSFKRGVIQVSGGSRHMPPAGNLSLRL---EPGQTENKIRRCGPYHFVTGVSILSGGMPTY 942
K DLS LP FN GGRPDER TRGSFT GV IMSGG RDVP EA+++ G+V+FVS +PDLS RTNA+R TERLG RG F PG + + GG RD L+ + G VLF S +PD+S EART +RP ER GSRGRFT G+R W GG PRDVP+ D G VL + S R +P +S+ GETNV GGR ER GR+GSF+ GV++ GG + A + L E GQ ENK RRCGP HFV GVSILSGGMP Y
Sbjct: 6 KSDLSGLPTFNVAGGRPDERFGTRGSFTRGVRIMSGGHTRDVPREAEVDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGTRGRFTPGGRRWVGGKPRDVPLEAEVDHGKVLFVSAVHKPDLSAEARTNAIRPKERLGSRGRFTAGVRGWVGGKPRDVPLPRLRDPGTVLFESASERSRPSMSFSGETNVSGGREDERHGRLGSFEHGVVEARGGPLQVQAAFASEVELLWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY 268
BLAST of mRNA_F-distichus_contig10525.457.1 vs. uniprot
Match: D7FZE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE3_ECTSI) HSP 1 Score: 274 bits (700), Expect = 5.020e-82 Identity = 149/263 (56.65%), Postives = 174/263 (66.16%), Query Frame = 1
Query: 169 KPDLSYLPAFNNVGGRPDERQETRGSFTPGVLIMSGGKRRDVPLEAKINPGEVIFVSDTLEPDLSGRTRTNALRKTERLGVRGGFAPGVKVFSGGVRRDHALKVHNNPGLVLFSSCNLEPDISVEARTKLLRPAERFGSRGRFTRGIRHWRGGSPRDVPVKAKIDHGEVL--AVSSRLKPDLSWGGETNVLGGRGGERLGRMGSFKRGVIQVSGGSRHMPPAGNLSLRL---EPGQTENKIRRCGPYHFVTGVSILSGGMPTY 942
KPDLS LP FN GGRPDER TRGSFT GV IMSGG RDVPLEA+++ G+V+FVS +PDLS RTNA+R ERLG RG F PG + ++GG RD L+ + G VL S +PD+S EAR RP ER GSRGRFT G+R W GG PRDVP+ D G VL + S R +P LS+ GETNV GGR ER GR+GSF+ GV++ GG + A + E GQ ENK RRCGP HFV GVSILSGGMP Y
Sbjct: 295 KPDLSGLPTFNVAGGRPDERFGTRGSFTRGVRIMSGGHARDVPLEAEVDHGKVLFVSAIHKPDLSTEARTNAVRPMERLGARGRFTPGGRRWAGGKPRDVPLEAEVDHGKVLLVSAVHKPDLSAEARINATRPTERLGSRGRFTAGVRRWGGGEPRDVPLPRVRDPGTVLFESASERSRPSLSFSGETNVSGGREDERHGRLGSFEHGVVEARGGPLQVQAAFASEVEQLWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY 557
BLAST of mRNA_F-distichus_contig10525.457.1 vs. uniprot
Match: A0A6H5KBU2_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU2_9PHAE) HSP 1 Score: 209 bits (531), Expect = 2.600e-61 Identity = 125/263 (47.53%), Postives = 143/263 (54.37%), Query Frame = 1
Query: 169 KPDLSYLPAFNNVGGRPDERQETRGSFTPGVLIMSGGKRRDVPLEAKINPGEVIFVSDTLEPDLSGRTRTNALRKTERLGVRGGFAPGVKVFSGGVRRDHALKVHNNPGLVLFSSCNLEPDISVEARTKLLRPAERFGSRGRFTRGIRHWRGGSPRDVPVKAKIDHGEVL--AVSSRLKPDLSWGGETNVLGGRGGERLGRMGSFKRGVIQVSGGSRHMPPAGNLSLRL---EPGQTENKIRRCGPYHFVTGVSILSGGMPTY 942
KPDLS LPAFN GGRPDER TRGSFT GV IMSGG RDVPLEA+++ G+V+FVS +PDLS RTNA+R TERL GSRGRFT G+R W GG PRDVP+ D G VL + S R +P LS+ ETNV GGR ER GR+GSF+ GV++ GG + A + E GQ ENK RRCGP HFV GVSILSGGMP Y
Sbjct: 6 KPDLSGLPAFNVAGGRPDERFGTRGSFTRGVHIMSGGHARDVPLEAEVDHGKVLFVSAVHKPDLSAEARTNAVRPTERL----------------------------------------------------------GSRGRFTAGVRRWAGGEPRDVPLPRVCDPGTVLFESASERSRPSLSFSRETNVSGGRQDERHGRLGSFEHGVVEARGGPLQVQAAFARDVEQLWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY 210
BLAST of mRNA_F-distichus_contig10525.457.1 vs. uniprot
Match: A0A6H5KAW1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW1_9PHAE) HSP 1 Score: 202 bits (513), Expect = 1.130e-58 Identity = 107/183 (58.47%), Postives = 126/183 (68.85%), Query Frame = 1
Query: 169 KPDLSYLPAFNNVGGRPDERQETRGSFTPGVLIMSGGKRRDVPLEAKINPGEVIFVSDTLEPDLSGRTRTNALRKTERLGVRGGFAPGVKVFSGGVRRDHALKVHNNPGLVLFSSCNLEPDISVEARTKLLRPAERFGSRGRFTRGIRHWRGGSPRDVPVKAKIDHGEVL--AVSSRLKPDLS 711
KPDLS LPAFN GGRPDER TRGSFT GV IMSGG RDVPLEA+++ G+V+FVS +PDLS RTNA+R ERLG RG F PG + ++GG RD L+ + G VLF S +PD+S EART +RP ER GSRGRFT G+R W GG PRDVP+ D G VL + S R +P LS
Sbjct: 24 KPDLSGLPAFNVAGGRPDERFGTRGSFTRGVHIMSGGHARDVPLEAEVDHGKVLFVSAIHKPDLSAEARTNAVRPMERLGARGRFTPGGRRWAGGKPRDVPLEAEVDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGSRGRFTAGVRRWAGGEPRDVPLPRVCDPGTVLFESASERSRPSLS 206
BLAST of mRNA_F-distichus_contig10525.457.1 vs. uniprot
Match: A0A6H5KZP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP0_9PHAE) HSP 1 Score: 145 bits (366), Expect = 5.250e-37 Identity = 111/261 (42.53%), Postives = 128/261 (49.04%), Query Frame = 1
Query: 169 KPDLSYLPAFNNVGGRPDERQETRGSFTPGVLIMSGGKRRDVPLEAKINPGEVIFVSDTLEPDLSGRTRTNALRKTERLGVRGGFAPGVKVFSGGVRRDHALKVHNNPGLVLFSSCNLEPDISVEARTKLLRPAERFGSRGRFTRGIRHWRGGSPRDVPVKAKIDHGEVL--AVSSRLKPDLSWGGETNVLGGRGGERLGRMGSFKRGVIQVSGGSRHMPPAGNLSLRL---EPGQTENKIRRCGPYHFVTGVSILSGGMP 936
KPDLS LP FN GGRPD R TRGSFT GV IMSGG R VP EA+++ G V R + LR+ L AP NPG + +L IS T + RP ER GSRGRFT GIR W GG P DV + D G VL + S R +P LS+ GETNV GG+ E G G +QV A + L E GQ E+K RRCGP H+VTGVSI G MP
Sbjct: 6 KPDLSGLPTFNVAGGRPDGRFGTRGSFTLGVRIMSGGHARGVPREAEVDHGNV------------RRAQAGPLRRGPHLRHPPHGAP------------------RNPGPLHAGRTSLGR-ISPPWPTAI-RPTERLGSRGRFTSGIRGWAGGKPPDVTLPRVRDPGTVLFESASERSRPSLSFSGETNVSGGKEDEARG-------GPLQVQA-------AFTSEVELLWREGGQREHKYRRCGPSHYVTGVSIPFGDMP 220
BLAST of mRNA_F-distichus_contig10525.457.1 vs. uniprot
Match: A0A835YKS3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKS3_9STRA) HSP 1 Score: 100 bits (248), Expect = 3.270e-20 Identity = 72/195 (36.92%), Postives = 100/195 (51.28%), Query Frame = 1
Query: 211 GRPDERQETRGSFTPGVLIMSGGKRRDVPL-EAKINPGEVIFVSDTLEPDLSGRTRTNALRKTERLGVRGGFAPGVKVFSGGVRRDHALKVHNNPGLVLFSSCNLEPDISVEARTKLL--RPAERFGSRGRFTRGIRHWRGGSPRDVPVKAKIDHGEVLAVSSRLKPDLSWGGETNVLGGRGGERLGRMGSFKRG 786
G P ER E ++ GV + +GG DVP+ + N G V++ S TL PD+ G R ER GV G ++ A+ N G VL + +L+P+++ RT + RP ER G RG FT G+ GG+ RDVP+ A+ HG VL S+ L+PD S E + G ER GR+GSF+ G
Sbjct: 12 GHPLER-EGYSAWAHGVTVFAGGVPHDVPVPHDQANHGTVLYTSATLAPDMRGELRLKTGAVDERQGVSGAQPHWIRPAH------DAVAPELNHGTVLATFPHLQPNMAYSYRTNIAGGRPTERLGVRGGFTPGVVICAGGAARDVPIAAERHHGTVLYTSAALRPDASQ--EPRLKQGTCYERQGRVGSFEHG 197
BLAST of mRNA_F-distichus_contig10525.457.1 vs. uniprot
Match: A0A835YLE4_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLE4_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 5.350e-15 Identity = 86/236 (36.44%), Postives = 106/236 (44.92%), Query Frame = 1
Query: 166 LKPDLSYLPAFNNVGGRPDERQETRGSFTPGVLIMSGGKRRDVPLEAKI-NPGEVIFVSDTLEPDLSGRTRTNALRKTERLGVRGGFAPGVKVFSGGVRRDHALKVHNNPGLVLFSSCNLEPDISVEARTKLL--RPAERFGSRGRFTRGIRHWRGGSPRDVPVKAK-IDHGEVLAVSSRLKPDLSWGGETNVLGGRGGERLGRMGSFKRGVIQVSGGSRHMPPAGNLSLRLEPGQ 861
LKPDLS LP G ER F V G VPL N G V+F S TL+PDLS T ERLG F + V D A N G VL + +L+P+++ RT + R ER G RG FT G+ GG DVPV A ++ G VL S+ L+PD S E + G ER GR+GSF+ G + MP A +L E GQ
Sbjct: 39 LKPDLSELPLTKP--GTAGERLARSALFRSRV----GPPIHYVPLSRNNENHGTVLFTSSTLKPDLSEVPLTKPGTDGERLGRSALFRSRARRPLRDVPVDLA---EPNRGTVLCTCPHLQPNMAYSYRTNVAGGRSTERLGVRGGFTPGVVTRAGGPACDVPVAAAPVNRGTVLYTSAALRPDESQ--ELRLKQGTSDERQGRVGSFEHGDAHL-----RMPTAAEAALWKEAGQ 258 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10525.457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10525.457.1 >prot_F-distichus_contig10525.457.1 ID=prot_F-distichus_contig10525.457.1|Name=mRNA_F-distichus_contig10525.457.1|organism=Fucus distichus monoicous|type=polypeptide|length=289bp MAPLRTFARTIAEEALSATYVKTALKPDLSYLPAFNNVGGRPDERQETRGback to top mRNA from alignment at F-distichus_contig10525:3257..5493- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10525.457.1 ID=mRNA_F-distichus_contig10525.457.1|Name=mRNA_F-distichus_contig10525.457.1|organism=Fucus distichus monoicous|type=mRNA|length=2237bp|location=Sequence derived from alignment at F-distichus_contig10525:3257..5493- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10525:3257..5493- >mRNA_F-distichus_contig10525.457.1 ID=mRNA_F-distichus_contig10525.457.1|Name=mRNA_F-distichus_contig10525.457.1|organism=Fucus distichus monoicous|type=CDS|length=1734bp|location=Sequence derived from alignment at F-distichus_contig10525:3257..5493- (Fucus distichus monoicous)back to top |