mRNA_F-distichus_contig105113.448.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig105113.448.1 vs. uniprot
Match: D7FP68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP68_ECTSI) HSP 1 Score: 249 bits (636), Expect = 1.140e-78 Identity = 143/240 (59.58%), Postives = 160/240 (66.67%), Query Frame = 1
Query: 1 IVGDKFLREFGGYPVKGWQERGEKCVAEFWGKNRARELERFRTDPECFVLLLGRKGAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSVTVVQLIMKDTMEQKLRSYVSNTDNSIN-------NFRRGSQAVADSAP-------------------------------GTRRSPARPK---KSPWEKTGSKRSRRLLG--TAAGAVPATPSKHQEHAKVHFLLTSLRSCRGRA 591
IVGDKFLRE GG+P +GWQ RGEKCVAEFWGKNRA+ELERFRTDPECFVLLLG++GAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSV+VVQLIMKDTMEQ+LRSYV++ D + N R GS + + +P G+ +P R K KSPWE G KR R AG + S QEHAKVHFLLTSLRS + A
Sbjct: 46 IVGDKFLRELGGFPEEGWQRRGEKCVAEFWGKNRAKELERFRTDPECFVLLLGKRGAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSVSVVQLIMKDTMEQELRSYVNSDDKTRNAAPTATPGSRWGSLSPTNGSPNGHTAHSSSPLRGAGAAGGVDGRFPANGGVGGSTPTPPRKKPREKSPWEGRGRKRPRSGGSGKRVAGGGGLSASSRQEHAKVHFLLTSLRSSKAAA 285
BLAST of mRNA_F-distichus_contig105113.448.1 vs. uniprot
Match: A0A6H5JNK1_9PHAE (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNK1_9PHAE) HSP 1 Score: 248 bits (632), Expect = 7.720e-75 Identity = 148/248 (59.68%), Postives = 164/248 (66.13%), Query Frame = 1
Query: 1 IVGDKFLREFGGYPVKGWQERGEKCVAEFWGKNRARELERFRTDPECFVLLLGRKGAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSVTVVQLIMKDTMEQKLRSYVSNTDNSIN-------NFRRGSQAVADSAP-------------------------------GTRRSPARPK---KSPWEKTGSKRSRR----LLGTAAGAVPATPSKHQEHAKVHFLLTSLRSCRGRA-MGGDG 606
IVGDKFLRE GG+P +GWQ RGEKCVAEFWGKNRA+ELERFRTDPECFVLLLG++GAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSV+VVQLIMKDTMEQ+LRSYV N+D + N R GS + + +P G+ +P R K KSPWE G KR R T G + A S QEHAKVHFLLTSLR + A GGDG
Sbjct: 371 IVGDKFLRELGGFPEEGWQRRGEKCVAEFWGKNRAKELERFRTDPECFVLLLGKRGAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSVSVVQLIMKDTMEQELRSYV-NSDKTRNAAPTATPGSRWGSLSPSHGSPDGHTAHPSSPLRGARAAGGVDDRFPANGGVGGSTPTPPRKKPREKSPWEGRGRKRPRSGGSGKRVTGGGGLSA--SSRQEHAKVHFLLTSLRPSKAAAAQGGDG 615
BLAST of mRNA_F-distichus_contig105113.448.1 vs. uniprot
Match: A0A7S3L006_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L006_9STRA) HSP 1 Score: 124 bits (310), Expect = 4.050e-32 Identity = 58/126 (46.03%), Postives = 86/126 (68.25%), Query Frame = 1
Query: 1 IVGDKFLREFGGYPVKGWQERGEKCVAEFWGKNRARELERFRTDPECFVLLLGRKGAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSVTVVQLIMKDTMEQKLRSYVSNTDNSINNFR 378
+VGD+ L F G CV+E+WG+ R +EL +F +DPECF +LLG+ G+ GLDLSFVTH+F +++IWD+SL Q VARA RMGA+G+V V +I +DT+E+ +++ + N I +F+
Sbjct: 12 LVGDRLLGRF-----------GSACVSEYWGRYRTQELHKFTSDPECFCMLLGKDGSEGLDLSFVTHIFFLEEIWDKSLAEQTVARAWRMGARGAVEVETIIAQDTVEETMKALEAGDLNKILDFK 126
BLAST of mRNA_F-distichus_contig105113.448.1 vs. uniprot
Match: A0A7S0B0U2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B0U2_9STRA) HSP 1 Score: 122 bits (305), Expect = 9.050e-32 Identity = 78/193 (40.41%), Postives = 106/193 (54.92%), Query Frame = 1
Query: 4 VGDKFLREFGGYPVKGWQERGEKCVAEFWGKNRARELERFRTDPECFVLLLGRKGAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSVTVVQLIMKDTMEQKLRSYVSNTDNSINNFRRGSQAVADSAPGTRRSPARPKKSPWEKTGSKRSRRLLGTAAGAVPATPSKHQEHAKVHFLLTSLRSCR 582
VGD+ +R FGG VAE+WG R++ELE+F + P CF +LLG++G+HGLDLSFVT++ L+D+++DRSL+ QVVARA RMGA G V V QLI D++E+ + S G Q G + A K + GS TA A A S HAK+H+LL ++R R
Sbjct: 1 VGDRLIRRFGG-----------ASVAEYWGSTRSKELEKFVSSPSCFCMLLGKEGSHGLDLSFVTNIILLDEMYDRSLQDQVVARAYRMGATGRVEVEQLIANDSIEELMES-----------INEGGQLPLQ---GDAKEAASGTKEKNDAAGS-------STAQSARQAKTS----HAKMHYLLKNVRLAR 157
BLAST of mRNA_F-distichus_contig105113.448.1 vs. uniprot
Match: A0A835Z414_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z414_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.730e-31 Identity = 60/111 (54.05%), Postives = 83/111 (74.77%), Query Frame = 1
Query: 1 IVGDKFLREFGGYPVKGWQERGEKCVAEFWGKNRARELERFRTDPECFVLLLGRKGAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSVTVVQLIMKDTMEQKL 333
+VGDK R +G P GW ERG + VAEF+G R EL +F+T +CFVLLL G+ GLDLSFVTH++L+++IW+++LE QV+ARA+R+GA G V V+QL M+ T+E+ L
Sbjct: 1102 MVGDKMYRYYGRCPEAGWLERGSEQVAEFFGARRNDELTKFKTSADCFVLLLNMDGSTGLDLSFVTHIYLLEEIWNKALERQVIARAHRLGATGPVKVIQLAMRGTIEETL 1212
BLAST of mRNA_F-distichus_contig105113.448.1 vs. uniprot
Match: A0A7S2UJZ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJZ7_9STRA) HSP 1 Score: 120 bits (300), Expect = 6.060e-28 Identity = 52/109 (47.71%), Postives = 80/109 (73.39%), Query Frame = 1
Query: 1 IVGDKFLREFGGYPVKGWQERGEKCVAEFWGKNRARELERFRTDPECFVLLLGRKGAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSVTVVQLIMKDTMEQ 327
++GD+ +R+F G+ ++E+WG +A+EL++F P+CF++LL R G+HGLDLSFVTHMF M++IWD+SLE QVVAR+ RMG KG V + QL+ ++++E+
Sbjct: 444 LIGDRLIRKF-----------GDDNISEYWGYAKAKELDKFIYSPDCFIMLLSRDGSHGLDLSFVTHMFFMEEIWDKSLEQQVVARSYRMGTKGHVEIEQLVSRNSVEE 541
BLAST of mRNA_F-distichus_contig105113.448.1 vs. uniprot
Match: A0A7S0C464_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C464_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.920e-27 Identity = 54/109 (49.54%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 1 IVGDKFLREFGGYPVKGWQERGEKCVAEFWGKNRARELERFRTDPECFVLLLGRKGAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSVTVVQLIMKDTMEQ 327
+VGD+ +R F G C+AE+WG +R EL +F CF +LLG+ G+HGLDLSFVTH+F +++IWD+SL+ QV+ARA RMGA GSV V QL+ K+++E+
Sbjct: 444 VVGDRLIRRF-----------GNDCIAEYWGGHRKSELAKFILSENCFCMLLGKDGSHGLDLSFVTHIFFVEEIWDKSLKDQVIARAYRMGATGSVHVEQLVAKNSVEE 541
BLAST of mRNA_F-distichus_contig105113.448.1 vs. uniprot
Match: A0A448ZGK3_9STRA (RING-type domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGK3_9STRA) HSP 1 Score: 117 bits (293), Expect = 7.040e-27 Identity = 56/119 (47.06%), Postives = 79/119 (66.39%), Query Frame = 1
Query: 1 IVGDKFLREFGGYPVKGWQERGEKCVAEFWGKNRARELERFRTDPECFVLLLGRKGAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSVTVVQLIMKDTMEQKLRSYVSNTD 357
I GD+ LR F G C+AE+WGK R +EL++F D +C +LLG+ G+ GLDLSFVTH+ ++Q+WD+SLE QVVARA RMGA+GSV V L+ ++++E+ + N D
Sbjct: 1387 ITGDRLLRRF-----------GSGCIAEYWGKYRKKELQKFVRDEKCLCMLLGKDGSEGLDLSFVTHIVFLEQVWDKSLENQVVARAWRMGARGSVEVETLVAENSIEETMFLLEGNQD 1494
BLAST of mRNA_F-distichus_contig105113.448.1 vs. uniprot
Match: B8CDY7_THAPS (Bromo domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDY7_THAPS) HSP 1 Score: 115 bits (287), Expect = 4.450e-26 Identity = 58/108 (53.70%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 7 GDKFLREFGGYPVKGWQERGEKCVAEF-WGKNRARELERFRTDPECFVLLLGRKGAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSVTVVQLIMKDTMEQ 327
GD+ +REFGG CVA+F + K R EL++FR DP+CF++LL ++G+HGLDLSF TH+F +D I+D+SLE QVVARA RMGA G V V QL KD++E+
Sbjct: 1339 GDRLIREFGG-----------ACVADFSFTKTRNEELKKFRLDPQCFIMLLSKQGSHGLDLSFCTHIFFLDTIYDKSLEQQVVARAYRMGATGPVYVEQLTAKDSIEE 1435
BLAST of mRNA_F-distichus_contig105113.448.1 vs. uniprot
Match: B7FQ34_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQ34_PHATC) HSP 1 Score: 107 bits (267), Expect = 2.080e-23 Identity = 53/116 (45.69%), Postives = 73/116 (62.93%), Query Frame = 1
Query: 1 IVGDKFLREFGGYPVKGWQERGEKCVAEFWGKNRARELERFRTDPECFVLLLGRKGAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSVTVVQLIMKDTMEQKLRSYVS 348
+ G++ LR+F G C+AE+WG R EL +F D +CF +LLGR G+ GLDLSFVTH+F +++I D+SL Q +ARA RMGAKG V VV L T+E+ ++ S
Sbjct: 1140 MAGNRLLRKF-----------GTACIAEYWGSFRTTELRKFTYDRDCFCMLLGRDGSEGLDLSFVTHIFFLEEIMDQSLRDQAIARAWRMGAKGRVRVVTLTAAKTVEETMQEIES 1244 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105113.448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig105113.448.1 >prot_F-distichus_contig105113.448.1 ID=prot_F-distichus_contig105113.448.1|Name=mRNA_F-distichus_contig105113.448.1|organism=Fucus distichus monoicous|type=polypeptide|length=202bp IVGDKFLREFGGYPVKGWQERGEKCVAEFWGKNRARELERFRTDPECFVLback to top mRNA from alignment at F-distichus_contig105113:69..1790- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig105113.448.1 ID=mRNA_F-distichus_contig105113.448.1|Name=mRNA_F-distichus_contig105113.448.1|organism=Fucus distichus monoicous|type=mRNA|length=1722bp|location=Sequence derived from alignment at F-distichus_contig105113:69..1790- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig105113:69..1790- >mRNA_F-distichus_contig105113.448.1 ID=mRNA_F-distichus_contig105113.448.1|Name=mRNA_F-distichus_contig105113.448.1|organism=Fucus distichus monoicous|type=CDS|length=1212bp|location=Sequence derived from alignment at F-distichus_contig105113:69..1790- (Fucus distichus monoicous)back to top |