mRNA_F-distichus_contig104968.433.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig104968.433.1 vs. uniprot
Match: A0A225VYH6_9STRA (RNA-directed DNA polymerase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VYH6_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.330e-12 Identity = 45/133 (33.83%), Postives = 73/133 (54.89%), Query Frame = 1
Query: 31 REALRAAVDTALEAGLPSDAETRLRDLLLGPLFDGFRRSLSGDPPARVDPFQVKLKVDADLSKVKARPRVYSPANTAWLDEQFAQLADAGMVCENPQAICSNPAQAVPKG----NGYRLVGDFKAVNQQSEPV 417
R+A+ + ALE G P E++LR ++ D +R +L DPPA+VDP +++LK A +K++PR Y PA ++ E ++L + G V ENP + ++P V K + YR D++ VN E +
Sbjct: 352 RDAIEKMLRAALEQGFPRRLESKLRAIVFK--HDVWRLTLGDDPPAKVDPLEIRLKEGA--KSIKSKPRQYPPAVRTFMREFNSKLVELGWVYENPTSRWASPVLPVRKAGMSVDEYRQTCDYRLVNDLIEAL 480
BLAST of mRNA_F-distichus_contig104968.433.1 vs. uniprot
Match: A0A2P4XB16_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XB16_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.150e-11 Identity = 48/133 (36.09%), Postives = 69/133 (51.88%), Query Frame = 1
Query: 31 REALRAAVDTALEAGLPSDAETRLRDLLLGPLFDGFRRSLSGDPPARVDPFQVKLKVDADLSKVKARPRVYSPANTAWLDEQFAQLADAGMVCENPQAICSNPAQAVPK---GNGYRLVGDFKAVNQQSEPVA 420
RE L V A + G S LR+++ D FR L DPPA+V+P ++ L+ DA +ARPR YSPA +A+L E L G + N ++ + A VPK N +RL D++ VN + P+A
Sbjct: 146 REKLNEMVVAAGDNGFDSGYLDSLREIVFE-YEDVFRIDLLADPPAKVEPLRITLRSDA--KPFRARPRRYSPAQSAFLSEHVRSLEKMGYIRRNNMSVWACAAVPVPKVNRPNEFRLTIDYRPVNAVTVPIA 275
BLAST of mRNA_F-distichus_contig104968.433.1 vs. uniprot
Match: G5A2I4_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A2I4_PHYSP) HSP 1 Score: 59.3 bits (142), Expect = 9.420e-9 Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 73 GLPSDAETRLRDLLLGPLFDGFRRSLSGDPPARVDPFQVKLKVDADLSKVKARPRVYSPANTAWLDEQFAQLADAGMVCEN 315
GL + RLR++LL D FR DPP +V P QV++KV+A +K A+PR YSP + A+LD A+L + G+V N
Sbjct: 18 GLSAKGVKRLREILLRRQ-DSFRLEFGSDPPVKVAPLQVRVKVNAQPTK--AQPRRYSPDDRAFLDRHTAKLLEFGLVFLN 95
BLAST of mRNA_F-distichus_contig104968.433.1 vs. uniprot
Match: A0A6A3YWA9_9STRA (Reverse transcriptase domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3YWA9_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 9.970e-9 Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 73 GLPSDAETRLRDLLLGPLFDGFRRSLSGDPPARVDPFQVKLKVDADLSKVKARPRVYSPANTAWLDEQFAQLADAGMVCENPQAICSNPAQAVPKGN-------GYRLVGDFKAVNQQSEPV 417
GL + RLR++LL D FR DPP +V P QV++KV+A +K A+PR YSP + A+LD A+L + G+V N ++ ++ + V K R+ D + VN+++E +
Sbjct: 486 GLSAMGVKRLREILLRRQ-DSFRLEFESDPPVKVAPLQVRVKVNAQPTK--AQPRRYSPDDRAYLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRGVNERTESM 604
BLAST of mRNA_F-distichus_contig104968.433.1 vs. uniprot
Match: A0A6G0NWQ3_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NWQ3_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 2.360e-8 Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 1
Query: 97 RLRDLLLGPLFDGFRRSLSGDPPARVDPFQVKLKVDADLSKVKARPRVYSPANTAWLDEQFAQLADAGMVCENPQAICSNPAQAVPKGN-------GYRLVGDFKAVNQQSEPV 417
RLR++LL D FR DPP +V P QV++KV+A +K A+PR YSP + A+LD A+L + G+V N ++ ++ + V K R+ D + VN+++E +
Sbjct: 21 RLREILLRRQ-DSFRLEFESDPPVKVAPLQVRVKVNAQPTK--AQPRRYSPDDRAYLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRGVNERTESM 131
BLAST of mRNA_F-distichus_contig104968.433.1 vs. uniprot
Match: A0A6A3VFD8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3VFD8_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 2.490e-8 Identity = 46/138 (33.33%), Postives = 74/138 (53.62%), Query Frame = 1
Query: 37 ALRAAVDTALEA----GLPSDAETRLRDLLLGPLFDGFRRSLSGDPPARVDPFQVKLKVDADLSKVKARPRVYSPANTAWLDEQFAQLADAGMVCENPQAICSNPAQAVPKGN-------GYRLVGDFKAVNQQSEPV 417
A+ +D+ L A GL + RLR++LL D FR DPP +V P QV++KV+A +K A+PR YSP + A+LD A+L + G+V N ++ ++ + V K R+ D + VN+++E +
Sbjct: 434 AVHGMLDSKLAAARAKGLSAMGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVKVNAQPTK--AQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAM 568
BLAST of mRNA_F-distichus_contig104968.433.1 vs. uniprot
Match: A0A6G0MLJ8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MLJ8_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 3.530e-8 Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 73 GLPSDAETRLRDLLLGPLFDGFRRSLSGDPPARVDPFQVKLKVDADLSKVKARPRVYSPANTAWLDEQFAQLADAGMVCENPQAICSNPAQAVPKGN-------GYRLVGDFKAVNQQSEPV 417
GL + RLR++LL D FR DPP +V P QV++KV+A +K A+PR YSP + A+LD A+L + G+V N ++ ++ + V K R+ D + VN+++E +
Sbjct: 315 GLSAMGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVKVNAQPTK--AQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAM 433
BLAST of mRNA_F-distichus_contig104968.433.1 vs. uniprot
Match: A0A6A3Q7S3_9STRA (Uncharacterized protein n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q7S3_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 3.620e-8 Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 73 GLPSDAETRLRDLLLGPLFDGFRRSLSGDPPARVDPFQVKLKVDADLSKVKARPRVYSPANTAWLDEQFAQLADAGMVCENPQAICSNPAQAVPKGN-------GYRLVGDFKAVNQQSEPV 417
GL + RLR++LL D FR DPP +V P QV++KV+A +K A+PR YSP + A+LD A+L + G+V N ++ ++ + V K R+ D + VN+++E +
Sbjct: 450 GLSAMGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVKVNAQPTK--AQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAM 568
BLAST of mRNA_F-distichus_contig104968.433.1 vs. uniprot
Match: A0A2P4WWJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWJ1_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 6.520e-8 Identity = 41/122 (33.61%), Postives = 66/122 (54.10%), Query Frame = 1
Query: 73 GLPSDAETRLRDLLLGPLFDGFRRSLSGDPPARVDPFQVKLKVDADLSKVKARPRVYSPANTAWLDEQFAQLADAGMVCENPQAICSNPAQAVPKGN-------GYRLVGDFKAVNQQSEPV 417
GL + RLR++LL D FR DPP +V P QV++KV+A +K A+PR YS + A+LD A+L + G+V N ++ ++ + V K R+ D + VN+++E +
Sbjct: 407 GLSAKGVKRLREILLRRQ-DSFRLEFGSDPPVKVAPLQVRVKVNAQPTK--AQPRRYSSNDKAFLDRHTAKLQEFGLVSLNHRSRWASAPRIVRKKEQGSDPTADPRMTIDTRGVNERTEAM 525
BLAST of mRNA_F-distichus_contig104968.433.1 vs. uniprot
Match: A0A6A3GI80_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GI80_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 8.970e-8 Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 1
Query: 97 RLRDLLLGPLFDGFRRSLSGDPPARVDPFQVKLKVDADLSKVKARPRVYSPANTAWLDEQFAQLADAGMVCENPQAICSNPAQAVPKGN-------GYRLVGDFKAVNQQSEPV 417
RLR++LL D FR DPP +V P QV++KV+A +K A+PR YSP + A+LD A+L + G+V N ++ ++ + V K R+ D + VN+++E +
Sbjct: 5 RLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVKVNAQPTK--AQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAM 115 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig104968.433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig104968.433.1 >prot_F-distichus_contig104968.433.1 ID=prot_F-distichus_contig104968.433.1|Name=mRNA_F-distichus_contig104968.433.1|organism=Fucus distichus monoicous|type=polypeptide|length=141bp MEVGNEVIARREALRAAVDTALEAGLPSDAETRLRDLLLGPLFDGFRRSLback to top mRNA from alignment at F-distichus_contig104968:447..869- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig104968.433.1 ID=mRNA_F-distichus_contig104968.433.1|Name=mRNA_F-distichus_contig104968.433.1|organism=Fucus distichus monoicous|type=mRNA|length=423bp|location=Sequence derived from alignment at F-distichus_contig104968:447..869- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig104968:447..869- >mRNA_F-distichus_contig104968.433.1 ID=mRNA_F-distichus_contig104968.433.1|Name=mRNA_F-distichus_contig104968.433.1|organism=Fucus distichus monoicous|type=CDS|length=846bp|location=Sequence derived from alignment at F-distichus_contig104968:447..869- (Fucus distichus monoicous)back to top |