mRNA_F-distichus_contig10493.431.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10493.431.1
Unique NamemRNA_F-distichus_contig10493.431.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
[Close]
BLAST of mRNA_F-distichus_contig10493.431.1 vs. uniprot
Match: D7FT80_ECTSI (DNA replication licensing factor MCM6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT80_ECTSI)

HSP 1 Score: 1175 bits (3040), Expect = 0.000e+0
Identity = 666/812 (82.02%), Postives = 692/812 (85.22%), Query Frame = 2 
Query:    2 QEAPKEFYVSFFNLPLVERVRQLKTNRIGRLVSVSGTVTRSTDVRPELLRGTFTCRKCGLVAPDVEQQYQYTEPTKCINPACQNTREWELDMQASNSASVFVDWQRLRVQENADEIPPGSMPRSLDVVLRGEAVEKAKAGDKTVFTGALIVVPDSSALARAGEATVGGKPPGKRGTEGPDQGVTGLKKMGVKELTYRTAFLASSVLPAEQVSGAYNIRDESDEAGAGGDGVEELTEEEGREILEMKNSNNIYSDMVNSIAPTVFGHSEVKRGVLLMLMGGVHKQTAEGMKLRGDINVCIVGDPSTAKSQFLKYVHGFLPRAIFTSGKASSAAGLTASVTKDHETGEFCIEAGALMLADNGICCIDEFDKMEITDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPLYGRYDRSKTLKANVQQISAPIMSRFDLFFVVLDECDETADFNIAQHIIRVHQNKAEALDPPFTAMQMQRYIRFARRLNPIITLEGRRTMVECYRALRQNDCVGRNKTAYRITVRQLESMIRLSEALARLHLDDQVRPRYVKEAFRLLRKSIIHVEAEDIILEEESEEENVEAGSNG--AREGDGAD----GSXXXXXXXXXXXXXXXXXDDGRDGKNVSRRRGGKRRRSEEPEGEGGARDVVEGGGNESVSQDGLRGRKENDTDVMDDADGG-DRDGGGT---YKDGKAKKVXXXXXXQQITFEQYQTITTTLATYMRQREDRAKEGEVGALQWKEVVSWYCHQHQEELTSEEDLSNMQKLVNQVIKRLITKDGLLIFHGEQDNTTADEDKLIAVHPNFAS 2407
            Q+APKEFYVSFFNLPLVERVRQLKTNRIGRLVSVSGTVTRSTDVRPELLRGTFTCRKCGLV+PDVEQQYQYTEPTKCINPACQNTR+WELDMQ S    VFVDWQRLRVQENADEIPPGSMPRSLDVVLRGEAVEKAKAGDKTVFTG LIVVPDSSALAR GEATVG KPPG+RG EGPD GVTGLKK+GVKELTYRTAFLASSVLPAEQVSG YNIRD+SDEAGAG DG EELTEEEGREILEMKNS+NIY+DMVNS+APTVFGHSEVKRGVLLML+GGVHKQTAEG+KLRGDINVCIVGDPSTAKSQFLKYVHGFLPRAIFTSGKASSAAGLTASV KDHETGEFCIEAGALMLADNGICCIDEFDKM+I DQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPLYGRYDRSKTLKANVQ ISAPIMSRFDLFFVVLDECDETADFNIAQHIIRVHQNKAEALDPPFTAMQMQRYIRFARRLNP IT EGR+TMVECYRALR+NDCVGRNKTAYRITVRQLESMIRLSEALARLHLDDQVRPRYVKEAFRLLRKSIIHVEAEDI+LEE  +EE +E G  G  A  GDG +    G XXXXXXXXXXXXXXXXX                                                          DADG  D DGG              XXXXXX QITFEQYQTITTTLATY+RQREDRAKEGE G L W EVVSWYCHQHQ+ELTSEEDLSNMQKLVNQVIKRL+TKDGLLI+ GE D+   DE+K IAVHPN+A+
Sbjct:  115 QDAPKEFYVSFFNLPLVERVRQLKTNRIGRLVSVSGTVTRSTDVRPELLRGTFTCRKCGLVSPDVEQQYQYTEPTKCINPACQNTRDWELDMQRS----VFVDWQRLRVQENADEIPPGSMPRSLDVVLRGEAVEKAKAGDKTVFTGTLIVVPDSSALARVGEATVGAKPPGRRGAEGPDAGVTGLKKLGVKELTYRTAFLASSVLPAEQVSGGYNIRDDSDEAGAGADGAEELTEEEGREILEMKNSSNIYADMVNSVAPTVFGHSEVKRGVLLMLLGGVHKQTAEGIKLRGDINVCIVGDPSTAKSQFLKYVHGFLPRAIFTSGKASSAAGLTASVMKDHETGEFCIEAGALMLADNGICCIDEFDKMDIGDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPLYGRYDRSKTLKANVQ-ISAPIMSRFDLFFVVLDECDETADFNIAQHIIRVHQNKAEALDPPFTAMQMQRYIRFARRLNPAITPEGRKTMVECYRALRENDCVGRNKTAYRITVRQLESMIRLSEALARLHLDDQVRPRYVKEAFRLLRKSIIHVEAEDIVLEESEDEEGLEEGDEGVGAPRGDGDEEDGPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADADGVVDEDGGSKRAXXXXXXXXXXXXXXXXXQITFEQYQTITTTLATYLRQREDRAKEGEGGGLPWGEVVSWYCHQHQQELTSEEDLSNMQKLVNQVIKRLLTKDGLLIYDGEPDDDAPDEEKRIAVHPNYAT 921
[Close]
BLAST of mRNA_F-distichus_contig10493.431.1 vs. uniprot
Match: A0A836CNJ8_9STRA (DNA replication licensing factor MCM6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNJ8_9STRA)

HSP 1 Score: 828 bits (2139), Expect = 2.760e-288
Identity = 500/816 (61.27%), Postives = 575/816 (70.47%), Query Frame = 2 
Query:    8 APKEFYVSFFNLPLVERVRQLKTNRIGRLVSVSGTVTRSTDVRPELLRGTFTCRKCGLVAPDVEQQYQYTEPTKCINPACQNTREWELDMQASNSASVFVDWQRLRVQENADEIPPGSMPRSLDVVLRGEAVEKAKAGDKTVFTGALIVVPDSSALARAGE---ATVGGKPPGKRGTEGPDQ--GVTGLKKMGVKELTYRTAFLASSVLPAE-QVSGAYNIRDESDEAGAGGDG--VEELTEEEGREILEMKNSNNIYSDMVNSIAPTVFGHSEVKRGVLLMLMGGVHKQTAEGMKLRGDINVCIVGDPSTAKSQFLKYVHGFLPRAIFTSGKASSAAGLTASVTKDHETGEFCIEAGALMLADNGICCIDEFDKMEITDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPLYGRYDRSKTLKANVQQISAPIMSRFDLFFVVLDECDETADFNIAQHIIRVHQNKAEA-LDPPFTAMQMQRYIRFARRLNPIITLEGRRTMVECYRALRQNDCVGRNKTAYRITVRQLESMIRLSEALARLHLDDQVRPRYVKEAFRLLRKSIIHVEAEDIILEEESEEENVEAGSNGAREGDGADGSXXXXXXXXXXXXXXXXXDDGRDGKNVSRRRGGKRRRSEEPEGEGGARDVVEGGGNESVSQDGLRGRKENDTDVMDDADGGDRDGGGTYKDGKAKKVXXXXXXQQITFEQYQTITTTLATYMRQREDRAK---------EGEVGALQWKEVVSWYCHQHQEELTSEEDLSNMQKLVNQVIKRLITKDGLLIFHGEQDNTTADEDKLIAVHPNF 2401
            AP+E++VSFFNLP VERVR L+T RIGRLVSVSGTVTR++DVRPELLRGTF CR+CGL A  VEQQ+ YTEP +C NP C N ++WELDM+ S     FVDWQRLRVQENADEIP GSMPRS+DV+LR E VEKAKAGDK VFTG L+V+PD+SAL+RAGE   AT GG   G       D   GVTGL+K+GV+E+TYRTAFLA S LPAE    G +NIRD+ D A A G      +L+EEE +EI +M  + ++Y  +  SIAP VF H EVKRGVLLML GGVHK T EG+KLRGDINVCIVGDPSTAKSQFLKYVHGFLPRA+F SGKASSAAGLTASV KDHETGEFC+EAGALMLADNGICCIDEFDKM+ TDQVAIHEAMEQQTISITKAGIQATLNART+ILAAANPLYGRYD SKTL+ANVQ ISAPIMSRFDLFFVVLDECDET D++IAQHIIRVHQN+  A LDPPFT  QMQRYIRFARRLNP I  +G++ MVECYRALRQND +GRN+ AYRITVRQLESM+RLSEALARLHLDD+VRP+YV+EA+RLLRKSIIHVE+ED++LE+  +                    XXXXXXXXXXXXXXXX DD       S         +  P G                                                      X       I+FE+++ +   L  Y+R+ E+R +               L+W   V WYC  HQ EL  E DL  M  L+ ++I+RLI KDG+LI   + D    D D+LIAVHPN+
Sbjct:  119 APREYFVSFFNLPRVERVRGLRTARIGRLVSVSGTVTRTSDVRPELLRGTFVCRRCGLAAEGVEQQFVYTEPQRCRNPQCANQKDWELDMKKSK----FVDWQRLRVQENADEIPAGSMPRSVDVILRHEVVEKAKAGDKMVFTGTLLVLPDASALSRAGESAVATRGGAGGGXXXXXXXDDVGGVTGLRKLGVREMTYRTAFLACSALPAEGPAGGGHNIRDDPDAAAAAGPAGLAADLSEEERQEIHDMGRTPDLYKKLCASIAPAVFSHMEVKRGVLLMLFGGVHKSTPEGIKLRGDINVCIVGDPSTAKSQFLKYVHGFLPRAVFASGKASSAAGLTASVIKDHETGEFCVEAGALMLADNGICCIDEFDKMDDTDQVAIHEAMEQQTISITKAGIQATLNARTAILAAANPLYGRYDTSKTLRANVQ-ISAPIMSRFDLFFVVLDECDETMDYSIAQHIIRVHQNQDPAVLDPPFTKEQMQRYIRFARRLNPYIGPDGQKAMVECYRALRQNDSLGRNRAAYRITVRQLESMVRLSEALARLHLDDEVRPKYVREAYRLLRKSIIHVESEDVVLED-GDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDDAETAPQYSNLV------AVRPPGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXRKRKPTPISFEKFREVQGALTLYLRRAEERGEGXXXXXXXXXXXXXXLRWGAAVDWYCAHHQAELEGEADLLAMVTLLGKIIRRLI-KDGVLICTADAD---VDADRLIAVHPNY 909
[Close]
BLAST of mRNA_F-distichus_contig10493.431.1 vs. uniprot
Match: A0A7S3V4K9_9STRA (DNA replication licensing factor MCM6 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4K9_9STRA)

HSP 1 Score: 741 bits (1914), Expect = 2.720e-253
Identity = 454/828 (54.83%), Postives = 559/828 (67.51%), Query Frame = 2 
Query:    5 EAPKEFYVSFFNLPLVERVRQLKTNRIGRLVSVSGTVTRSTDVRPELLRGTFTCRKCGLVAPDVEQQYQYTEPTKCINPACQNTREWELDMQASNSASVFVDWQRLRVQENADEIPPGSMPRSLDVVLRGEAVEKAKAGDKTVFTGALIVVPDSSALARAGEATVGGKPPGKR-GTEGPDQGVTGLKKMGVKELTYRTAFLASSVLPAEQVSGAYNIRDESDEAGA-------------GGDGVE-------ELTEEEGREILEMKNSNNIYSDMVNSIAPTVFGHSEVKRGVLLMLMGGVHKQTAEGMKLRGDINVCIVGDPSTAKSQFLKYVHGFLP-RAIFTSGKASSAAGLTASVTKDHETGEFCIEAGALMLADNGICCIDEFDKMEITDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPLYGRYDRSKTLKANVQQISAPIMSRFDLFFVVLDECDETADFNIAQHIIRVHQNKAEALDPPFTAMQMQRYIRFARRLNPIITLEGRRTMVECYRALRQNDCVGRNKTAYRITVRQLESMIRLSEALARLHLDDQVRPRYVKEAFRLLRKSIIHVEAEDIILEEESEEENVEAGSNGAREGDGADGSXXXXXXXXXXXXXXXXXDDGRDGKNVSRRRGGKRRRSEEPEGEGGARDVVEGGGNESVSQDGLRGRKENDTDVMDDADGGDRDGGGTYKDGKAKKVXXXXXXQQITFEQYQTITTTLATYMRQREDRAKEGE----VGALQWKEVVSWYCHQHQEEL-TSEEDLSNMQKLVNQVIKRLITKDGLLIF-HGEQD-NTTADEDKLIAVHPNF 2401
            ++  +++V+  NLP +  +R L+T+ IG+L SVSGTVTR++DVRPELL GTF C+KCGL A +++QQY YT P  C NP CQN  EW LD+  S+    F DWQ+LRVQEN+ ++P G MPRS+DV++R E VE+ KAGD  VF G+L+V+PD+SALARAGEA    K   +R    G   GV GLK +GV+ELTY+T F+A+SVL  + ++  Y  +     AGA             GG+ ++       E++++E  EI EMK+S+N+Y+ MV SI P  FGH EVKRGVLL L+GGVHK TAEG++LRGDINVCIVGDPS AKSQFLKYVH FLP R+++TSGKASSAAGLTA+V +D +TGE+CIEAGALMLADNGICCIDEFDKM+  DQVAIHEAMEQQTISITKAGIQATLNAR SILAAANP+YGRYDR+KTLKANV  +SAPI+SRFDLFFVVLDECDE  D N+A+HI+ VH+ + +A+D PFT  QMQRYIRFAR +NP IT E ++ MVECYR LRQ D +GR++TAYRITVRQLESM+RLSEALARLH DD VRP YV EAFRLLRKSIIHVE+ED+  +EE+E                      XXXXXXXXXXXXXXX         S    G+  R EE   EG   + V    N    +                            K       XXXXXX QITFE Y++IT  + TY+R +E    E E       L W E V WY  Q + ++  S E+L  M+KL N VI+RLI  D +L++  GE       + D+ I VHPN+
Sbjct:  209 DSKNKYFVAMHNLPNMLSMRNLRTDTIGQLTSVSGTVTRTSDVRPELLSGTFRCQKCGLAAENIQQQYHYTRPVLCRNPRCQNRSEWLLDLPESS----FTDWQKLRVQENSSDVPAGCMPRSMDVIMRNEMVERCKAGDSVVFVGSLVVIPDASALARAGEAPQSSKDQSRREDARGGGGGVRGLKALGVRELTYKTCFVATSVLSVDALA-RYRNQSAIYSAGAMASFLYGGGANHAGGEDMKTTQEVAMEMSDQERAEIREMKSSSNLYTKMVESICPATFGHQEVKRGVLLQLLGGVHKTTAEGIRLRGDINVCIVGDPSVAKSQFLKYVHAFLPSRSVYTSGKASSAAGLTAAVQRDQDTGEYCIEAGALMLADNGICCIDEFDKMDPVDQVAIHEAMEQQTISITKAGIQATLNARASILAAANPIYGRYDRTKTLKANVA-LSAPILSRFDLFFVVLDECDELQDMNVAKHILSVHRCEEKAVDVPFTKEQMQRYIRFARTINPKITSESQKKMVECYRKLRQGDTLGRSRTAYRITVRQLESMVRLSEALARLHCDDLVRPMYVDEAFRLLRKSIIHVESEDVTFDEENE----------------------XXXXXXXXXXXXXXXXXXXXXXXTSEHHPGEFNRREEAN-EGLEEERVPEAANSEAQEP-------------------------PAKKXXXXXXXXXXXXTQITFELYESITNVICTYLRSKEVDGDEAESDNSTKYLTWGEAVEWYLGQCERQIGDSMEELERMRKLTNLVIRRLINDDHVLMYIAGEAAVKDVIETDRKITVHPNY 982
[Close]
BLAST of mRNA_F-distichus_contig10493.431.1 vs. uniprot
Match: A0A7S2KP81_9STRA (DNA helicase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KP81_9STRA)

HSP 1 Score: 739 bits (1909), Expect = 7.240e-252
Identity = 448/837 (53.52%), Postives = 541/837 (64.64%), Query Frame = 2 
Query:   20 FYVSFFNLPLVERVRQLKTNRIGRLVSVSGTVTRSTDVRPELLRGTFTCRKCGLVAPDVEQQYQYTEPTKCINPACQN--TREWELDM--------QASNSASVFVDWQRLRVQENADEIPPGSMPRSLDVVLRGEAVEKAKAGDKTVFTGALIVVPDSSALARAGEAT-VGGKPPG----KRGTEGPDQGVTGLKKMGVKELTYRTAFLASSVLP---AEQVS--GAYNIRDES-----------DEAGAGGDGVE-------ELTEEEGREILEMKNSNNIYSDMVNSIAPTVFGHSEVKRGVLLMLMGGVHKQTAEGMKLRGDINVCIVGDPSTAKSQFLKYVHGFLP-RAIFTSGKASSAAGLTASVTKDHETGEFCIEAGALMLADNGICCIDEFDKMEITDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPLYGRYDRSKTLKANVQQISAPIMSRFDLFFVVLDECDETADFNIAQHIIRVHQNKAEALDPPFTAMQMQRYIRFARRLNPIITLEGRRTMVECYRALRQNDCVGRNKTAYRITVRQLESMIRLSEALARLHLDDQVRPRYVKEAFRLLRKSIIHVEAEDIILEEESEEENVEAGSNGAREGDGADGSXXXXXXXXXXXXXXXXXDDGRDGKNVSRRRGGKRRRSEEPEGEGGARDVVEGGGNESVSQDGLRGRKENDTDVMDDADGGDRDGGGTYKDGKAKKVXXXXXXQQITFEQYQTITTTLATYMRQREDRAK--EGEVGA-LQWKEVVSWYCHQHQEEL-TSEEDLSNMQKLVNQVIKRLITKDGLLIFHGEQDNTTADEDKLIAVHPNF 2401
            ++V+ +N P V  VR L+T  IGR  S+SGTVTR++DVRPELL G+F CRKCGLVAPDV QQY  T P  C NP CQN  + E+ L++        + S   S FVDWQRLRVQENADEIPPGSMPR++DV++R E VE+AKAGD+ V TG+L+VVPD SALARAGEA    G  PG    K    G   G+ GL  +GV+ELTYRT F+A  VLP   AE+V   G  + RDE              +GAG D  +       E TEEE  EI  MK  +N+Y+ +  SIAP  FGHSEVKRG+LLML+ GVHK T+EG++LRGDINVCIVGDPSTAKSQFLK+VH FLP R ++TSGKA+SAAGLTA+V +D +TGEFCIEAGALMLADNGICCIDEFDKM+  DQVAIHEAMEQQTISITKAGIQATLNAR SILAAANP++GRYDRSKTL+ANVQ +SAPI+SRFDLFFVVLDECD+ AD+N+A+HI+ VH+     +DPPFT  QM RYIRFAR LNP IT E RR +++CYR LRQ D +GR++TAYRITVRQLES+IRLSEALARLH DD V+P YV+EAFRLLRKSIIHVE ED+  ++E  +E  E         DG D                                       +E   E  A                     E D  V             T +       XXX    QI+FEQY  I+  ++ Y+R +E      EGE    L W EV  WY  Q + ++  S E+L  M+KL N VI+RL+  D +L+  G  +    + D+ IAVHPN+
Sbjct:  256 YFVAIYNAPSVLPVRALRTGTIGRFSSISGTVTRTSDVRPELLVGSFRCRKCGLVAPDVIQQYHLTRPPLCRNPRCQNRTSSEFHLEVTTGGATMEEGSGGGSEFVDWQRLRVQENADEIPPGSMPRTIDVIVRNEMVERAKAGDRVVLTGSLVVVPDGSALARAGEAARASGNNPGARSGKEAASGGGGGIRGLAALGVRELTYRTCFVACCVLPSDVAERVKRRGEESSRDEGYINESFLFSMGSGSGAGVDTPKTAQEVAMEFTEEEKEEIRMMKGMSNLYTKLTESIAPNTFGHSEVKRGILLMLLSGVHKTTSEGIRLRGDINVCIVGDPSTAKSQFLKFVHSFLPERCVYTSGKAASAAGLTAAVVRDQDTGEFCIEAGALMLADNGICCIDEFDKMDQHDQVAIHEAMEQQTISITKAGIQATLNARASILAAANPIHGRYDRSKTLRANVQ-LSAPILSRFDLFFVVLDECDDVADYNVAKHIVDVHRCDEAVVDPPFTQDQMLRYIRFARTLNPQITEESRRVLIDCYRKLRQGDTMGRSRTAYRITVRQLESLIRLSEALARLHCDDLVKPSYVREAFRLLRKSIIHVETEDVTFDDEGFDEGHE---------DGFD--------------------------------------EDEEMAEAAAAXXXXXXXXXXXXXXXXXXXXEADEPVEPP----------TQQQKPXXXXXXXKKKTQISFEQYGAISNAVSAYLRSKESEQDDTEGEESKYLTWGEVAEWYLEQCEVDIGDSLEELERMRKLTNLVIRRLVQADHVLMCIGNTEGIP-EADRKIAVHPNY 1033
[Close]
BLAST of mRNA_F-distichus_contig10493.431.1 vs. uniprot
Match: B8BT64_THAPS (DNA replication licensing factor MCM6 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BT64_THAPS)

HSP 1 Score: 714 bits (1844), Expect = 4.310e-246
Identity = 384/591 (64.97%), Postives = 454/591 (76.82%), Query Frame = 2 
Query:   20 FYVSFFNLPLVERVRQLKTNRIGRLVSVSGTVTRSTDVRPELLRGTFTCRKCGLVAPDVEQQYQYTEPTKCINPACQN--TREWELDMQASNSA------SVFVDWQRLRVQENADEIPPGSMPRSLDVVLRGEAVEKAKAGDKTVFTGALIVVPDSSALARAGEATVGGKPPGKRGTEGPDQG---VTGLKKMGVKELTYRTAFLASSVLPAEQVSGAYNIRDESDEAGAGGDGVE-------ELTEEEGREILEMKNSNNIYSDMVNSIAPTVFGHSEVKRGVLLMLMGGVHKQTAEGMKLRGDINVCIVGDPSTAKSQFLKYVHGFLP-RAIFTSGKASSAAGLTASVTKDHETGEFCIEAGALMLADNGICCIDEFDKMEITDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPLYGRYDRSKTLKANVQQISAPIMSRFDLFFVVLDECDETADFNIAQHIIRVHQNKAEALDPPFTAMQMQRYIRFARRLNPIITLEGRRTMVECYRALRQNDCVGRNKTAYRITVRQLESMIRLSEALARLHLDDQVRPRYVKEAFRLLRKSIIHVEAEDIILEEESEE 1735
            ++V+ +N P V  VR L+T  IGR  S+SGTVTRS+DVRPELL G+F CRKCGLVAPDV QQY  T P+ C NP CQN  T E+ L++ +   +      S FVDWQRLRVQENADEIPPGSMPR++DVV+R E VE+AKAGD+ V TG+L+VVPD SALARAGEA       G+ G E        V GL  +GV+ELTYRT F+A  VLP++               G GGD  +       E TEEE  EI  MK    +Y  +  S+AP+ FGH+EVKRG+LLML+ GVHK T+EG++LRGDINVCIVGDPSTAKSQFLK+VH FLP R ++TSGKA+SAAGLTA+V +D +TGE+CIEAGALMLADNGICCIDEFDKME  DQVAIHEAMEQQTISITKAGIQATLNAR SILAAANP++GRYDRSKTL+ANVQ +SAPI+SRFDLFFVVLDECDE AD+N+A+HII VH+     +DPPF+  QM RYIRFAR LNP IT E RR +V+CYR LRQ D +GR++TAYRITVRQLES+IRLSEALARLH DD V+P YV+EAFRLLRKSIIHVE ED+  ++E ++
Sbjct:  157 YFVAIYNAPTVFPVRALRTGTIGRFSSISGTVTRSSDVRPELLVGSFRCRKCGLVAPDVMQQYHLTRPSLCRNPRCQNRNTSEFVLELNSGGESNEGGGGSEFVDWQRLRVQENADEIPPGSMPRTIDVVVRNEMVERAKAGDRVVLTGSLVVVPDGSALARAGEAARAAGNDGRNGKEAXXXXXXXVRGLAALGVRELTYRTCFVACCVLPSDLFGLGGGTS-----GGRGGDNPKSSHEVAMEFTEEEKDEIRRMKGMPRLYDLLAESVAPSTFGHTEVKRGILLMLLSGVHKTTSEGIRLRGDINVCIVGDPSTAKSQFLKFVHAFLPERCVYTSGKAASAAGLTAAVIRDQDTGEYCIEAGALMLADNGICCIDEFDKMEQHDQVAIHEAMEQQTISITKAGIQATLNARASILAAANPIHGRYDRSKTLRANVQ-LSAPILSRFDLFFVVLDECDEVADYNVAKHIIDVHRCDEAVVDPPFSQDQMLRYIRFARTLNPQITEESRRILVDCYRKLRQGDTMGRSRTAYRITVRQLESLIRLSEALARLHCDDVVKPSYVREAFRLLRKSIIHVETEDVTFDDEGDD 741
[Close]
BLAST of mRNA_F-distichus_contig10493.431.1 vs. uniprot
Match: B7FXF9_PHATC (DNA replication licensing factor MCM6 (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXF9_PHATC)

HSP 1 Score: 692 bits (1787), Expect = 7.350e-239
Identity = 368/597 (61.64%), Postives = 454/597 (76.05%), Query Frame = 2 
Query:   20 FYVSFFNLPLVERVRQLKTNRIGRLVSVSGTVTRSTDVRPELLRGTFTCRKCGLVAPDVEQQYQYTEPTKCINPACQNTREWELDMQASNSASVFVDWQRLRVQENADEIPPGSMPRSLDVVLRGEAVEKAKAGDKTVFTGALIVVPDSSALARAGEATVGGKPPGKRGTEGPDQ-------GVTGLKKMGVKELTYRTAFLASSVLPAEQVSGAYNIRDESDEAGA------GGDGVE-----------ELTEEEGREILEMKNSNNIYSDMVNSIAPTVFGHSEVKRGVLLMLMGGVHKQTAEGMKLRGDINVCIVGDPSTAKSQFLKYVHGFLP-RAIFTSGKASSAAGLTASVTKDHETGEFCIEAGALMLADNGICCIDEFDKMEITDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPLYGRYDRSKTLKANVQQISAPIMSRFDLFFVVLDECDETADFNIAQHIIRVHQNKAEALDPPFTAMQMQRYIRFARRLNPIITLEGRRTMVECYRALRQNDCVGRNKTAYRITVRQLESMIRLSEALARLHLDDQVRPRYVKEAFRLLRKSIIHVEAEDIILEEESEE 1735
            ++++  N+P +  VR+++T+RIGRL SV+GTVTR+++VRPELL  TF C++CGL+A  + QQY YT PT C NP C N       ++ +  AS FVDWQ+LRVQEN+DEIPPGSMPRS+DV++R E VE+AKAGD  VF G+++V+PD SALARAGEA     P       GP         GV GLK +GV+ELTYRT F+A+ VLP + ++ A      +    A      G   +E           E T +E  EI EMK+S+ +Y DMV SI PT FGH EVK+G+LLML+GGVHK T +G+KLRGDINVC+VGDPSTAKSQFLKYVH FLP RA++TSGKASSAAGLTA+V +D +TGE+CIEAGALMLADNGICCIDEFDKM+  DQVAIHEAMEQQTISITKAGIQATLNAR SILAAANP+YGRYDR+KTLKANV  +SAPI+SRFDLFFVVLDECD  +D  +AQHI++VH+ + EA+ PP+T  QMQRYIRFAR L P IT E +R +V+CYR LRQ D +GR++TAYRITVRQLESMIRLSEA+ARLH D +++P YV+EAFRLL+ SII VE  D+ +++  +E
Sbjct:   70 YFIAIHNVPGLLPVREVRTDRIGRLTSVAGTVTRTSEVRPELLVATFRCQQCGLLAERIAQQYHYTRPTLCRNPRCANASPLLFTLETT--ASEFVDWQKLRVQENSDEIPPGSMPRSMDVIVRNEMVERAKAGDACVFVGSMVVIPDGSALARAGEA-----PRATTRRNGPTDAAAGXXGGVRGLKALGVRELTYRTCFVATCVLPTDALARAAAAPSATHRTHATAALLFGSQALEHHEPTPEEVVLEFTRQERNEIREMKSSSRLYQDMVESICPTTFGHKEVKKGLLLMLLGGVHKTTTDGIKLRGDINVCVVGDPSTAKSQFLKYVHAFLPSRAVYTSGKASSAAGLTAAVQRDQDTGEYCIEAGALMLADNGICCIDEFDKMDPNDQVAIHEAMEQQTISITKAGIQATLNARASILAAANPIYGRYDRTKTLKANVA-LSAPILSRFDLFFVVLDECDPDSDRRVAQHILKVHRCQEEAVQPPYTKEQMQRYIRFARTLYPKITPESQRVLVDCYRKLRQGDTLGRSRTAYRITVRQLESMIRLSEAMARLHCDPEIQPAYVREAFRLLKTSIIQVETSDVDVDDYDDE 658
[Close]
BLAST of mRNA_F-distichus_contig10493.431.1 vs. uniprot
Match: R7Q8Z2_CHOCR (DNA replication licensing factor MCM6 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8Z2_CHOCR)

HSP 1 Score: 680 bits (1755), Expect = 1.400e-231
Identity = 364/572 (63.64%), Postives = 443/572 (77.45%), Query Frame = 2 
Query:    8 APKEFYVSFFNLPLVERVRQLKTNRIGRLVSVSGTVTRSTDVRPELLRGTFTCRKCGLVAPDVEQQYQYTEPTKCINPACQNTREWELDMQASNSASVFVDWQRLRVQENADEIPPGSMPRSLDVVLRGEAVEKAKAGDKTVFTGALIVVPDSSALARAGEATVGGKPPGKRGTEGPDQGVTGLKKMGVKELTYRTAFLASSVLPAEQVSGAYNIRDESDEAGAGGDGVEELTEEEGREILEMKNSNNIYSDMVNSIAPTVFGHSEVKRGVLLMLMGGVHKQTAEGMKLRGDINVCIVGDPSTAKSQFLKYVHGFLPRAIFTSGKASSAAGLTASVTKDHETGEFCIEAGALMLADNGICCIDEFDKMEITDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPLYGRYDRSKTLKANVQQISAPIMSRFDLFFVVLDECDETADFNIAQHIIRVHQNKAEALDPPFTAMQMQRYIRFARRLNPIITLEGRRTMVECYRALRQNDCVGRNKTAYRITVRQLESMIRLSEALARLHLDDQVRPRYVKEAFRLLRKSIIHVEAEDIILEE 1723
            A + F++S +NLP V ++R L++ +IG L S+SGTVTR+++VRPELL GTFTC +C  +  +VEQQ++YTEP  C    CQN +EW+L+++ S     FVDWQR+R+QENA EIP GSMPR++DV+LR + VE AKAGDK + TG LIV+PD+ +LA AGE    G P G  G  G   G +G+K+ GV+EL YRTAFLA  V  AE   GA +IR E  +       +   T EE  EI  MK  + +Y  M  SIAPTV+GH EVKRGVLLML GGVHK+T EG+ LRGDIN+C+VGDPSTAKSQFLKYV  FLPRA++TSGKASSAAGLTASV KDHETGEFCIEAGALMLADNGICCIDEFDKM++ DQVAIHEAMEQQTISI+KAGIQATLNARTSILAAANP+ GRYDRS+TLK N+  +SAPIMSRFDLFFVVLDEC+E++D+N+A+ II +H+  A +    F   Q+QRYI+ AR++NP+I  E +  +VE Y+ LRQ D  G  +++YRITVRQLES+IRLSEALARLHLDD VRP+YVKEA RLLRKSIIHVE ED+ L E
Sbjct:   56 AGRNFWLSVYNLPSVRKLRDLRSEQIGELSSISGTVTRTSEVRPELLLGTFTCMECDDLFENVEQQFRYTEPPMC--QTCQNKKEWKLNVEKS----TFVDWQRVRMQENAQEIPAGSMPRTIDVILRNDNVESAKAGDKVIVTGTLIVLPDAVSLAGAGEKVQAG-PKGGVGLRG--DGYSGVKQFGVRELVYRTAFLACHVASAEGKPGATSIRGEEADEETFDSILRSYTREERDEIGAMKAHSRLYQRMAGSIAPTVYGHDEVKRGVLLMLFGGVHKETKEGISLRGDINICVVGDPSTAKSQFLKYVVSFLPRAVYTSGKASSAAGLTASVAKDHETGEFCIEAGALMLADNGICCIDEFDKMDLKDQVAIHEAMEQQTISISKAGIQATLNARTSILAAANPVAGRYDRSRTLKQNLT-MSAPIMSRFDLFFVVLDECEESSDYNVARFIISIHKGGATSQPTEFNEGQLQRYIKAARKINPVILPESKLLLVESYKRLRQADSTGGVRSSYRITVRQLESLIRLSEALARLHLDDCVRPQYVKEAVRLLRKSIIHVETEDVDLNE 617
[Close]
BLAST of mRNA_F-distichus_contig10493.431.1 vs. uniprot
Match: A0A1Y1Y7L4_9FUNG (DNA replication licensing factor MCM6 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y7L4_9FUNG)

HSP 1 Score: 680 bits (1755), Expect = 1.310e-230
Identity = 364/580 (62.76%), Postives = 450/580 (77.59%), Query Frame = 2 
Query:   14 KEFYVSFFNLPLVERVRQLKTNRIGRLVSVSGTVTRSTDVRPELLRGTFTCRKCGLVAPDVEQQYQYTEPTKCINPACQNTREWELDMQASNSASVFVDWQRLRVQENADEIPPGSMPRSLDVVLRGEAVEKAKAGDKTVFTGALIVVPDSSALARAG---EATVGGKPPGKRGTEGPDQGVTGLKKMGVKELTYRTAFLASSVLPAEQVSGAYNIRDESDEAGAGGDGV-EELTEEEGREILEMKN-SNNIYSDMVNSIAPTVFGHSEVKRGVLLMLMGGVHKQTAEGMKLRGDINVCIVGDPSTAKSQFLKYVHGFLPRAIFTSGKASSAAGLTASVTKDHETGEFCIEAGALMLADNGICCIDEFDKMEITDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPLYGRYDRSKTLKANVQQISAPIMSRFDLFFVVLDECDETADFNIAQHIIRVHQNKAEALDPPFTAMQMQRYIRFARRLNPIITLEGRRTMVECYRALRQNDCVGRNKTAYRITVRQLESMIRLSEALARLHLDDQVRPRYVKEAFRLLRKSIIHVEAEDIILEEESEEE 1738
            +EF V+F+NLP V RVR+L+T++IG+L+ VSGTVTR+++VRPEL+ GTFTC  C  +   V QQ++YTEP+ C NP CQN   W L++  S     F+DWQ++RVQENA+EIP GSMPRS++V+LRGE VE+AKAGDK VFTG LIVVPD   L   G   EA    K  G+      ++GV+GLK +GV+ELTY+ AFLA SV  A+  SG  N++ +S++A      +  + T+EE  ++  M + SN IYS +VNSIAPTVFGH EVK+G+LL LMGGVHK TAEGM LRGDINVC+VGDPST+KSQFLKYV  FLPRAIFTSGKASSAAGLTASVTKD ETG+F IEAGALMLADNGIC IDEFDKM++ DQVAIHEAMEQQTISI KAGI ATLNAR SILAAANP+ GRYD+  TL+ N+  +S PIMSRFDLFFV+LDEC+ET D+N+A+HI+ VH+ K EAL+P F+  Q+QRYIRFAR L P +T E  + + + Y  LR  D  G +  +YRITVRQLESMIRLSEALAR+H D+++  +YV+EA RLLR+SIIHVE +D +LE+ESEE+
Sbjct:  187 REFQVAFYNLPAVSRVRELRTDKIGQLMCVSGTVTRTSEVRPELVYGTFTCDDCFTLVRGVLQQFKYTEPSICQNPTCQNRSSWTLNLDQSK----FIDWQKVRVQENANEIPTGSMPRSVEVILRGETVERAKAGDKAVFTGCLIVVPDVGQLGTTGTRVEAHRDTKEFGRSKEGFANEGVSGLKALGVRELTYKLAFLACSVESADNKSGIRNVKGDSEDAEEDQSVLLSQFTQEEINDLRNMASMSNVIYSKLVNSIAPTVFGHEEVKKGILLQLMGGVHKTTAEGMNLRGDINVCLVGDPSTSKSQFLKYVCSFLPRAIFTSGKASSAAGLTASVTKDEETGDFTIEAGALMLADNGICAIDEFDKMDVADQVAIHEAMEQQTISIAKAGIHATLNARASILAAANPVAGRYDKKMTLRQNIN-MSPPIMSRFDLFFVILDECNETTDYNLARHIVNVHRFKDEALEPEFSTAQLQRYIRFARTLKPKLTHESSKLLWQKYCDLRLADASGLSNNSYRITVRQLESMIRLSEALARVHCDEEIGTKYVREAHRLLRQSIIHVETDDTVLEDESEEQ 761
[Close]
BLAST of mRNA_F-distichus_contig10493.431.1 vs. uniprot
Match: A0A2V3IMD0_9FLOR (DNA replication licensing factor MCM6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD0_9FLOR)

HSP 1 Score: 683 bits (1763), Expect = 1.890e-230
Identity = 366/572 (63.99%), Postives = 442/572 (77.27%), Query Frame = 2 
Query:   11 PKEFYVSFFNLPLVERVRQLKTNRIGRLVSVSGTVTRSTDVRPELLRGTFTCRKCGLVAPDVEQQYQYTEPTKCINPACQNTREWELDMQASNSASVFVDWQRLRVQENADEIPPGSMPRSLDVVLRGEAVEKAKAGDKTVFTGALIVVPDSSALARAGEATVGGKPPGKRGTEGPDQGVTGLKKMGVKELTYRTAFLASSVLPAEQVSGAYNIRDESDEAGAGGDGVEELTEEEGREILEMKNSNNIYSDMVNSIAPTVFGHSEVKRGVLLMLMGGVHKQTAEGMKLRGDINVCIVGDPSTAKSQFLKYVHGFLPRAIFTSGKASSAAGLTASVTKDHETGEFCIEAGALMLADNGICCIDEFDKMEITDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPLYGRYDRSKTLKANVQQISAPIMSRFDLFFVVLDECDETADFNIAQHIIRVHQNKAEALDPPFTAMQMQRYIRFARRLNPIITLEGRRTMVECYRALRQNDCVGRNKTAYRITVRQLESMIRLSEALARLHLDDQVRPRYVKEAFRLLRKSIIHVEAEDIILEEE 1726
            PK +++S FN+P V ++R L++++IG L S+SGT+TR+++VRPELL G+FTC +CG    +VEQQ++YTEP  C    C     W+LD++ S     FVDWQR+R+QENA EIP GSMPR++DV+ R + VE AKAGDK V TG L+V+PD+ +LARAGE  V   P G  G  G   G TG+K+ GV+EL YRT+FLAS V  A+   G+ +IR E  +       +   T+EE  EI+ MK +  +Y  MVNSIAPTV+GH EVKRGVLLML GGVHK+T EG+ LRGDINVCIVGDPSTAKSQFLKY   FLPRA++ SGKASSAAGLTASV KDHETGEFCIEAGALMLADNGICCIDEFDKM+I DQVAIHEAMEQQTISI+KAGIQATLNARTSILAAANP+ GRYDRS+TLK N+  ++APIMSRFDLFFVVLDE +E++DFN+A+ I+ VH+  A A    F+  Q+QRYIR AR LNP+I  E R  +V+ Y+ LRQ D  G  +T+YRITVRQLES+IRLSEALARLHLD  VRP+YVKEA RLLRKSIIHVE EDI L+ E
Sbjct:  143 PKSYWLSIFNMPTVLKLRDLRSDQIGMLASISGTITRTSEVRPELLVGSFTCNECGEPFSNVEQQFRYTEPPMC--QLCNTKHNWKLDVEKS----TFVDWQRVRLQENAQEIPAGSMPRTIDVIFRNDTVESAKAGDKAVLTGTLVVIPDAVSLARAGER-VRAVPKGGAGLRG--DGYTGVKEFGVRELVYRTSFLASHVAAADAKPGSTSIRGEDADHETYESVLHSYTKEERDEIVLMKAAPRLYQKMVNSIAPTVYGHDEVKRGVLLMLFGGVHKETTEGISLRGDINVCIVGDPSTAKSQFLKYTVDFLPRAVYASGKASSAAGLTASVAKDHETGEFCIEAGALMLADNGICCIDEFDKMDIKDQVAIHEAMEQQTISISKAGIQATLNARTSILAAANPIGGRYDRSRTLKQNLT-MTAPIMSRFDLFFVVLDESEESSDFNVAKFIVSVHRGGASAQPTEFSKAQLQRYIRAARHLNPVIPPESRDLLVQSYKQLRQADSFGGARTSYRITVRQLESLIRLSEALARLHLDSFVRPQYVKEAVRLLRKSIIHVETEDINLDNE 704
[Close]
BLAST of mRNA_F-distichus_contig10493.431.1 vs. uniprot
Match: UPI001E1D5346 (LOW QUALITY PROTEIN: DNA replication licensing factor MCM6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5346)

HSP 1 Score: 676 bits (1745), Expect = 3.700e-230
Identity = 357/566 (63.07%), Postives = 444/566 (78.45%), Query Frame = 2 
Query:   14 KEFYVSFFNLPLVERVRQLKTNRIGRLVSVSGTVTRSTDVRPELLRGTFTCRKCGLVAPDVEQQYQYTEPTKCINPACQNTREWELDMQASNSASVFVDWQRLRVQENADEIPPGSMPRSLDVVLRGEAVEKAKAGDKTVFTGALIVVPDSSALARAGEATVGGKPPGKRGTEGPDQGVTGLKKMGVKELTYRTAFLASSVLPAEQVSGAYNIRDESDEAGAGGDGVEELTEEEGREILEMKNSNNIYSDMVNSIAPTVFGHSEVKRGVLLMLMGGVHKQTAEGMKLRGDINVCIVGDPSTAKSQFLKYVHGFLPRAIFTSGKASSAAGLTASVTKDHETGEFCIEAGALMLADNGICCIDEFDKMEITDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPLYGRYDRSKTLKANVQQISAPIMSRFDLFFVVLDECDETADFNIAQHIIRVHQNKAEALDPPFTAMQMQRYIRFARRLNPIITLEGRRTMVECYRALRQNDCVGRNKTAYRITVRQLESMIRLSEALARLHLDDQVRPRYVKEAFRLLRKSIIHVEAEDI 1711
            +++++S +NLP V R+R+L++  +G L ++SGTVTRS++VRPELL GTFTC +C  +  +VEQQ++YTEP  C  P C N ++W L ++ S     FVDWQRLR+QENA EIPPGSMPR+LDV++R + VE AKAGDK V +G+LIV+PD+++LARAG+  V   P G         GVTG K+ G +EL YR AFLA  + PA+   G+  +  E DE       ++  ++EE  +I EMKN   +Y+ MV SIAP+++GH EVKRG+LLML GGVHK+T EG+ LRGDINVCIVGDPSTAKSQFLKYV  FLPRA++TSGKASSAAGLTASV +D +TGEFCIEAGALMLADNGICCIDEFDKM+  DQVAIHEAMEQQTISI+KAGIQATLNARTSILAAANP+YGRYDRS+TLK N+  +SAPIMSRFDLFFVVLD+CDE AD+NIA+ I+ +H+    AL   ++  Q+QRYI  AR+LNP +T E R  +VE Y++LRQ+D    +++AYRITVRQLES+IRLSEALARLHLDD+V PRYVKEA RLLRKSIIHVE +D+
Sbjct:   64 RQYWLSVYNLPQVRRLRELRSKHVGGLAAISGTVTRSSEVRPELLLGTFTCGECNDLYANVEQQFRYTEPPMC--PTCNNKKDWNLVVEKS----TFVDWQRLRLQENAAEIPPGSMPRTLDVIVRNDNVESAKAGDKVVLSGSLIVIPDAASLARAGDR-VQAVPSGAPAIRA--DGVTGAKQFGARELVYRLAFLACHIAPADAKPGSL-LPCEEDEDEPMEVLLQSFSKEERDQIKEMKNQPRLYNRMVESIAPSIYGHDEVKRGILLMLFGGVHKKTQEGISLRGDINVCIVGDPSTAKSQFLKYVVNFLPRAVYTSGKASSAAGLTASVARDSDTGEFCIEAGALMLADNGICCIDEFDKMDEKDQVAIHEAMEQQTISISKAGIQATLNARTSILAAANPVYGRYDRSRTLKQNIN-MSAPIMSRFDLFFVVLDDCDENADYNIARFIVGMHKGGVTALPTEYSEGQLQRYISVARKLNPTVTHESRNLLVESYKSLRQSDATRGSRSAYRITVRQLESLIRLSEALARLHLDDEVTPRYVKEAVRLLRKSIIHVETDDV 618
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10493.431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT80_ECTSI0.000e+082.02DNA replication licensing factor MCM6 n=2 Tax=Ecto... [more]
A0A836CNJ8_9STRA2.760e-28861.27DNA replication licensing factor MCM6 n=1 Tax=Trib... [more]
A0A7S3V4K9_9STRA2.720e-25354.83DNA replication licensing factor MCM6 n=1 Tax=Chae... [more]
A0A7S2KP81_9STRA7.240e-25253.52DNA helicase n=1 Tax=Skeletonema marinoi TaxID=267... [more]
B8BT64_THAPS4.310e-24664.97DNA replication licensing factor MCM6 n=1 Tax=Thal... [more]
B7FXF9_PHATC7.350e-23961.64DNA replication licensing factor MCM6 (Fragment) n... [more]
R7Q8Z2_CHOCR1.400e-23163.64DNA replication licensing factor MCM6 n=1 Tax=Chon... [more]
A0A1Y1Y7L4_9FUNG1.310e-23062.76DNA replication licensing factor MCM6 n=1 Tax=Basi... [more]
A0A2V3IMD0_9FLOR1.890e-23063.99DNA replication licensing factor MCM6 n=1 Tax=Grac... [more]
UPI001E1D53463.700e-23063.07LOW QUALITY PROTEIN: DNA replication licensing fac... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10493contigF-distichus_contig10493:1208..8598 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1005.7
Seed ortholog evalue1e-290
Seed eggNOG ortholog2880.D7FT80
Preferred nameMCM6
KEGG koko:K02542
KEGG Pathwayko03030,ko04110,ko04111,ko04113,map03030,map04110,map04111,map04113
KEGG ModuleM00285
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000082,GO:0000166,GO:0000228,GO:0000278,GO:0000347,GO:0000724,GO:0000725,GO:0000727,GO:0000785,GO:0000790,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005656,GO:0005657,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006267,GO:0006268,GO:0006270,GO:0006271,GO:0006275,GO:0006277,GO:0006279,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007276,GO:0007281,GO:0007292,GO:0007304,GO:0007306,GO:0007307,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009653,GO:0009888,GO:0009889,GO:0009987,GO:0010556,GO:0010927,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0022616,GO:0030154,GO:0030174,GO:0030554,GO:0030703,GO:0030707,GO:0030855,GO:0031261,GO:0031298,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032392,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032989,GO:0032991,GO:0032993,GO:0033260,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0036387,GO:0036388,GO:0042555,GO:0042623,GO:0042802,GO:0043142,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043596,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044786,GO:0044843,GO:0046483,GO:0048468,GO:0048477,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051276,GO:0051321,GO:0051704,GO:0051716,GO:0060255,GO:0060429,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0071103,GO:0071162,GO:0071704,GO:0071824,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097367,GO:0097373,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902292,GO:1902299,GO:1902315,GO:1902969,GO:1902975,GO:1903046,GO:1903047,GO:1990837,GO:2000112
EggNOG free text desc.DNA replication initiation
EggNOG OGsCOG1241@1,KOG0480@2759
Ec32 ortholog descriptionNucleic acid-binding, OB-fold
Ec32 orthologEc-06_003780.1
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032
Exons15
Model size2540
Cds size2139
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928970.3082554-UTR-F-distichus_contig10493:1207..13881622928970.3082554-UTR-F-distichus_contig10493:1207..1388Fucus distichus monoicousUTRF-distichus_contig10493 1208..1388 +
1690885086.302851-UTR-F-distichus_contig10493:1207..13881690885086.302851-UTR-F-distichus_contig10493:1207..1388Fucus distichus monoicousUTRF-distichus_contig10493 1208..1388 +
1622928970.3249931-UTR-F-distichus_contig10493:1708..18011622928970.3249931-UTR-F-distichus_contig10493:1708..1801Fucus distichus monoicousUTRF-distichus_contig10493 1709..1801 +
1690885086.3159387-UTR-F-distichus_contig10493:1708..18011690885086.3159387-UTR-F-distichus_contig10493:1708..1801Fucus distichus monoicousUTRF-distichus_contig10493 1709..1801 +
1622928970.522743-UTR-F-distichus_contig10493:8471..85981622928970.522743-UTR-F-distichus_contig10493:8471..8598Fucus distichus monoicousUTRF-distichus_contig10493 8472..8598 +
1690885086.4985025-UTR-F-distichus_contig10493:8471..85981690885086.4985025-UTR-F-distichus_contig10493:8471..8598Fucus distichus monoicousUTRF-distichus_contig10493 8472..8598 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928970.334674-CDS-F-distichus_contig10493:1801..18211622928970.334674-CDS-F-distichus_contig10493:1801..1821Fucus distichus monoicousCDSF-distichus_contig10493 1802..1821 +
1690885086.3323612-CDS-F-distichus_contig10493:1801..18211690885086.3323612-CDS-F-distichus_contig10493:1801..1821Fucus distichus monoicousCDSF-distichus_contig10493 1802..1821 +
1622928970.3474352-CDS-F-distichus_contig10493:1977..21101622928970.3474352-CDS-F-distichus_contig10493:1977..2110Fucus distichus monoicousCDSF-distichus_contig10493 1978..2110 +
1690885086.3468084-CDS-F-distichus_contig10493:1977..21101690885086.3468084-CDS-F-distichus_contig10493:1977..2110Fucus distichus monoicousCDSF-distichus_contig10493 1978..2110 +
1622928970.3581686-CDS-F-distichus_contig10493:2394..25581622928970.3581686-CDS-F-distichus_contig10493:2394..2558Fucus distichus monoicousCDSF-distichus_contig10493 2395..2558 +
1690885086.3575406-CDS-F-distichus_contig10493:2394..25581690885086.3575406-CDS-F-distichus_contig10493:2394..2558Fucus distichus monoicousCDSF-distichus_contig10493 2395..2558 +
1622928970.3691092-CDS-F-distichus_contig10493:2778..28571622928970.3691092-CDS-F-distichus_contig10493:2778..2857Fucus distichus monoicousCDSF-distichus_contig10493 2779..2857 +
1690885086.366466-CDS-F-distichus_contig10493:2778..28571690885086.366466-CDS-F-distichus_contig10493:2778..2857Fucus distichus monoicousCDSF-distichus_contig10493 2779..2857 +
1622928970.3805828-CDS-F-distichus_contig10493:3068..32031622928970.3805828-CDS-F-distichus_contig10493:3068..3203Fucus distichus monoicousCDSF-distichus_contig10493 3069..3203 +
1690885086.3752701-CDS-F-distichus_contig10493:3068..32031690885086.3752701-CDS-F-distichus_contig10493:3068..3203Fucus distichus monoicousCDSF-distichus_contig10493 3069..3203 +
1622928970.390454-CDS-F-distichus_contig10493:4072..42491622928970.390454-CDS-F-distichus_contig10493:4072..4249Fucus distichus monoicousCDSF-distichus_contig10493 4073..4249 +
1690885086.3872192-CDS-F-distichus_contig10493:4072..42491690885086.3872192-CDS-F-distichus_contig10493:4072..4249Fucus distichus monoicousCDSF-distichus_contig10493 4073..4249 +
1622928970.4000347-CDS-F-distichus_contig10493:4690..48341622928970.4000347-CDS-F-distichus_contig10493:4690..4834Fucus distichus monoicousCDSF-distichus_contig10493 4691..4834 +
1690885086.397244-CDS-F-distichus_contig10493:4690..48341690885086.397244-CDS-F-distichus_contig10493:4690..4834Fucus distichus monoicousCDSF-distichus_contig10493 4691..4834 +
1622928970.4109585-CDS-F-distichus_contig10493:5107..52601622928970.4109585-CDS-F-distichus_contig10493:5107..5260Fucus distichus monoicousCDSF-distichus_contig10493 5108..5260 +
1690885086.4060252-CDS-F-distichus_contig10493:5107..52601690885086.4060252-CDS-F-distichus_contig10493:5107..5260Fucus distichus monoicousCDSF-distichus_contig10493 5108..5260 +
1622928970.4211106-CDS-F-distichus_contig10493:5534..56571622928970.4211106-CDS-F-distichus_contig10493:5534..5657Fucus distichus monoicousCDSF-distichus_contig10493 5535..5657 +
1690885086.4141133-CDS-F-distichus_contig10493:5534..56571690885086.4141133-CDS-F-distichus_contig10493:5534..5657Fucus distichus monoicousCDSF-distichus_contig10493 5535..5657 +
1622928970.4340293-CDS-F-distichus_contig10493:6095..62451622928970.4340293-CDS-F-distichus_contig10493:6095..6245Fucus distichus monoicousCDSF-distichus_contig10493 6096..6245 +
1690885086.4224637-CDS-F-distichus_contig10493:6095..62451690885086.4224637-CDS-F-distichus_contig10493:6095..6245Fucus distichus monoicousCDSF-distichus_contig10493 6096..6245 +
1622928970.4492815-CDS-F-distichus_contig10493:6512..65961622928970.4492815-CDS-F-distichus_contig10493:6512..6596Fucus distichus monoicousCDSF-distichus_contig10493 6513..6596 +
1690885086.4345772-CDS-F-distichus_contig10493:6512..65961690885086.4345772-CDS-F-distichus_contig10493:6512..6596Fucus distichus monoicousCDSF-distichus_contig10493 6513..6596 +
1622928970.4661021-CDS-F-distichus_contig10493:6978..74671622928970.4661021-CDS-F-distichus_contig10493:6978..7467Fucus distichus monoicousCDSF-distichus_contig10493 6979..7467 +
1690885086.4451442-CDS-F-distichus_contig10493:6978..74671690885086.4451442-CDS-F-distichus_contig10493:6978..7467Fucus distichus monoicousCDSF-distichus_contig10493 6979..7467 +
1622928970.4812057-CDS-F-distichus_contig10493:7835..80061622928970.4812057-CDS-F-distichus_contig10493:7835..8006Fucus distichus monoicousCDSF-distichus_contig10493 7836..8006 +
1690885086.4644647-CDS-F-distichus_contig10493:7835..80061690885086.4644647-CDS-F-distichus_contig10493:7835..8006Fucus distichus monoicousCDSF-distichus_contig10493 7836..8006 +
1622928970.4965665-CDS-F-distichus_contig10493:8354..84711622928970.4965665-CDS-F-distichus_contig10493:8354..8471Fucus distichus monoicousCDSF-distichus_contig10493 8355..8471 +
1690885086.4816663-CDS-F-distichus_contig10493:8354..84711690885086.4816663-CDS-F-distichus_contig10493:8354..8471Fucus distichus monoicousCDSF-distichus_contig10493 8355..8471 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10493.431.1prot_F-distichus_contig10493.431.1Fucus distichus monoicouspolypeptideF-distichus_contig10493 1802..8471 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10493.431.1

>prot_F-distichus_contig10493.431.1 ID=prot_F-distichus_contig10493.431.1|Name=mRNA_F-distichus_contig10493.431.1|organism=Fucus distichus monoicous|type=polypeptide|length=713bp
MQASNSASVFVDWQRLRVQENADEIPPGSMPRSLDVVLRGEAVEKAKAGD
KTVFTGALIVVPDSSALARAGEATVGGKPPGKRGTEGPDQGVTGLKKMGV
KELTYRTAFLASSVLPAEQVSGAYNIRDESDEAGAGGDGVEELTEEEGRE
ILEMKNSNNIYSDMVNSIAPTVFGHSEVKRGVLLMLMGGVHKQTAEGMKL
RGDINVCIVGDPSTAKSQFLKYVHGFLPRAIFTSGKASSAAGLTASVTKD
HETGEFCIEAGALMLADNGICCIDEFDKMEITDQVAIHEAMEQQTISITK
AGIQATLNARTSILAAANPLYGRYDRSKTLKANVQQISAPIMSRFDLFFV
VLDECDETADFNIAQHIIRVHQNKAEALDPPFTAMQMQRYIRFARRLNPI
ITLEGRRTMVECYRALRQNDCVGRNKTAYRITVRQLESMIRLSEALARLH
LDDQVRPRYVKEAFRLLRKSIIHVEAEDIILEEESEEENVEAGSNGAREG
DGADGSGNEGNGGDDNGNGNGDEDDGRDGKNVSRRRGGKRRRSEEPEGEG
GARDVVEGGGNESVSQDGLRGRKENDTDVMDDADGGDRDGGGTYKDGKAK
KVKKKKKKQQITFEQYQTITTTLATYMRQREDRAKEGEVGALQWKEVVSW
YCHQHQEELTSEEDLSNMQKLVNQVIKRLITKDGLLIFHGEQDNTTADED
KLIAVHPNFASV*
back to top

mRNA from alignment at F-distichus_contig10493:1208..8598+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10493.431.1 ID=mRNA_F-distichus_contig10493.431.1|Name=mRNA_F-distichus_contig10493.431.1|organism=Fucus distichus monoicous|type=mRNA|length=7391bp|location=Sequence derived from alignment at F-distichus_contig10493:1208..8598+ (Fucus distichus monoicous)
TCAGGAAGCACCGAAGGAATTCTACGTGAGCTTCTTTAACTTACCGCTGG
TGGAACGTGTTCGCCAGCTCAAGACCAACCGCATCGGCCGCCTGGTCAGC
GTAAGCGGTACGGTCACTAGGTCGACCGACGTGCGGCCGGAGCTATTGAG
GGGCACGTTTACTTGCCGGAAGTGCGGCCTGGTGAGGAATGGCGGTGACC
TACAGACTTCGTACGATGCGGTGGAAACCCTAGGAACGCATAACGCGTGA
GGGAGAAGCACCAATTGTTCTGTGACCGAGCGTTTCGCCCCAAGTTCGAC
CGATCGAATCAACCGGGAACAGTTACATTGCTTTGCCCGCTCAGTTTTCC
TGCTTTTTGGACGACCCCGATCTCCCAAGCCTCGTCCATCCGTAATATTT
GAGGATCCGTTTGCACAAAGCATCTCCTCTAGCTAAGCACGAGCTCCTTC
CACCATTGCTGTCGATTTTTTACGTACTGTTGCCTTCTCTCTCCGTTGAA
GGTGGCGCCCGATGTTGAGCAGCAATACCAATACACGGAGCCCACTAAGT
GCATCAACCCGGCGTGCCAGAATACTAGAGAGTGGGAGCTCGACATGCAG
GCGAGTAATAGCGCGTCAACTCGGCCACCAGGACCACCGGTGCTTTGGTC
TCCTATAATAGGACATATTGTGAAAGAGGCGGCGCGTGATCGAGAATGGC
CGTCCTTGTGCACGATCTAGGCGATCCTCTGGCGCGCTCTTCTTTCTTCC
CTCGCTTGCTCTTTTCAGAGAAGCGTTTTCGTCGACTGGCAACGGCTGAG
AGTGCAAGAAAACGCCGATGAAATCCCCCCCGGCAGCATGCCGCGATCTT
TGGATGTGGTGCTTAGGGGGGAGGCCGTGGAGAAGGCAAAGGCAGGCGAC
AAGGTGTGACTACAGTCATAACAGCTATGCGCGCACCACCACGATTTCGC
GGAGGGAAGTAAATGCCTTTCTGCTGTACTCAGCGCCCCTCCGTAGATGC
CGATCCATGAAACGTTCGCGGTTAAAATATGGTGTTCCAGGTGCGGTGCG
ATGAGTCCAAGGCTTGCCCTTGCATTCCTAGCGAACCTTTTGGACGATGG
CCTGTCATAATATGTTGCGTTCTTTTCAAGGCGCTAGACGTGGCTATTTT
TCCCGAGCGCCCTTGATGTTTGCACCATTTTCCGCAGACGGTTTTCACAG
GGGCCTTGATCGTGGTCCCCGACTCGAGTGCGCTAGCGCGAGCCGGAGAG
GCAACAGTTGGTGGAAAACCGCCAGGGAAGAGAGGGACTGAGGGCCCCGA
CCAGGGGGTCACGGGACTCAAAAAGATGGGAGTGAAAGAGCTAACTTACA
GGTAAGGAGAGACGACTCCGAAGAGAGTGCGCTTTGTGCCGAAAATCAGA
TTTGAGCGCAAACGCCGCGTCGATTCTGGTTTGGTTAAGGCAGCACGCCG
CGATCGTCTTGATGGGTTTCCGCGCCGCTGACAGCTTCTTCGACACGGTG
TAAGGGTTCGCTCAGAATACAGGGCGCCCTGTCCCTAATGACAACATGTT
AAATAATTCTCCTTACACCAGGACGGCGTTTCTGGCGAGCTCGGTTTTGC
CCGCGGAGCAGGTTTCTGGGGCGTACAACATCCGCGACGAGAGCGACGAG
GTAGATTTCCCCTTTTGCGCGGGTCGTGGTAGTAATTTTTCATTTTTCAG
TCGAGCCGTTGAACCCTGATATATTCGGTCGATGGGCCGTCTCATATGCA
TCTCAGTGGAAGGCATATGGTCGGCCATGTTAGCTCTATATTTTTAAGGT
CACGCACTTGCAGTTTTGTTGACTGCATCCGGTCATTCCCCTTATTCTGT
GCTTTGTCCAGGCGGGGGCAGGTGGCGATGGAGTGGAAGAGCTAACCGAG
GAGGAAGGGCGTGAAATCCTTGAAATGAAGAACAGCAACAATATCTACAG
CGACATGGTTAATAGCATCGCGCCCACCGTGTTCGGTCATTCCGAGGTGC
TGACCATCGAAGCGATCTATTGATGCGGCTGCAAGGGTTGTGTCATACAC
CCCCCTAGCCTGATCTTCGTTGCCGATTTTGTAGCCTCTGGCTCGCGCTG
GCAAAGCTTGCTTCTTTAATGTATATCGCAGGCTTTCCCCACTAAGAACA
CAAGCTAGCTTCGTTGATATTTGGACCAAGATCCTTTGCGCTTGTTGGTA
TCACATTTTCAGGAGCCTTGCCAGCACTGAAGATCTCACAGCACAGGATT
GATTGACTGGTTGATTGTGTCTTAAGCTTGGTCGGATCATGTGAGAGATG
CGGTAGACGAGGAAGAGAGACCATGCTGCTGCCCAAGCTCTTGCCCCCCC
TCGGAGCAAACTGCTAGAGGGTATCGAATCATCGAACACGTTGACGAAAC
CTTTTTTTCCGGAAAATAGTGTTGCACTCCTTGTTTATCGACCCACGAAA
CGAAACCTTATTTCTCGTGATGAAAAAAACGCCTGAAAAACGACCCAATT
GTTCGGGGCATTTACGTTTGACGTACCTCGAGCTACGTACAAGTATGTAC
GACGCACCAACGTAAGTAATCCGCGAACGTAAGACGAAGAATTCGCGTCA
CGGCGCCGGGTTACGCCAGAGAGCGGGAGCTGATTTTCGCGCGTGGCCAA
GAACGAATTTCGATTCGATAGCAATGTCTAGGCTGAAAATATTGAGACAA
AGTATTGCTGCACGTTGTAGGTATGATATGGAATGGTACAGCAGTATTCG
TGAAACTATTTCTGGATCATAAGGGCGCAACTTCATCAACTCAGGTGATC
ATTTTTTTTTGTCAAGACCCTGGTTCACACCACGTGTTATGGATATATCG
CGAATACCTTGGCAGGTGAAGCGCGGGGTTCTCCTAATGCTCATGGGAGG
CGTACATAAGCAGACGGCAGAAGGTATGAAACTCCGCGGAGACATCAACG
TGTGCATCGTTGGCGACCCTTCTACGGCCAAGAGCCAATTTCTGAAGTAC
GTTCACGGCTTCCTCCCGCGGGCCATCTTCACGTCAGGAAAGGTATCATT
ATTAATAATGTACTGGTATCAGTAAGGCCTCCAATGTCGTTTCCCACTGC
AAGGAGAAGTACTTCGATACATGCCCTCCATCCCCCGCAAGTGTGACATG
GAGAACGCAAGGTTTCGCTTGACTGGGATACTCGCGCCTGTTTTTTTTTG
GGGGGGGGGGTAATATATATAATCAGAGGTGAGGTCTGTTCAATCATTGA
CTTATCAACCCGTTTGTCTCATGTAGCGGAACTCTTTCGGAGCTTCTCAT
CCTTCGCTGTCTCTTTGACCGGAGAGATATGTTTCCATCGTAGCTCCCCC
ACGATTTGCCTCGCAGTCGGCTGGTTGCTGTTGCAGCGGCTGTATCGTGA
ACTGCTTCTATAATTCGCGCGTATTCATCCCGCTTTGTTCTTTTGTCGGT
TTTGCCTCCACTCTTACCCTCAACGGGAATCAGGCGTCAAGCGCGGCGGG
TCTGACTGCGTCCGTCACCAAGGATCACGAAACGGGGGAATTTTGCATCG
AGGCCGGCGCGCTCATGCTCGCGGACAACGGTATCTGCTGCATCGACGAG
TTCGACAAGATGGAAATCACGGACCAGGTGACAAGGAGGCGCCGTTTAAG
AAATATAGTAATTAATAGACGCTGATGCCTGGATACAAAGGTGTGTTGTT
TGCCAATGTCGCTTGCTTCCGCGCTGCCCATCATTTGTTTTGGTCGTGTT
GCCGATGTTTTCTTGTGTTAACCTATTCTTCGGTCGTCCGGAGCTCGCTA
CGTGCAATGTTGTTGTTGGAGGCGATATCGCGAGGTGGATGTGATGCCAA
ACTATGCTACTCGTGCTTGGCGTCTCTTCGCCCGTTCGTGCCTGTTCCAG
GTCGCCATCCACGAGGCAATGGAGCAGCAAACAATCTCCATCACCAAGGC
CGGCATTCAGGCCACTCTCAACGCTCGAACGTCGATTCTCGCCGCGGCAA
ACCCGCTCTACGGGCGCTACGATCGCTCCAAGACGCTCAAGGCAAATGTG
CAGGTGATCACTGATGGGTCACTTTCCTTCACTCGTTGCTTGCAGAAAAA
TATGCGAAGACTGGCCTGTTTTAACCCTTAACCTTGTGTTTTCCTCCATT
TTCGCTGGGATCAAAGTCCGCAATACCCTGATCGAGCGCCAATAACACGA
GAGCATTGCTTCTCGTCAGACCCTTGCAACTTTTCCGATCGGCTTACCCT
ACAGGATACCTACCCCCCCCCCCAAAAAAAAAAAACTCCTCTCCGCTCGT
CTTATTGGCTCGTTTGGATGCATGGAGCAGATCAGCGCGCCCATCATGAG
TCGTTTCGACCTGTTTTTCGTGGTTTTGGACGAGTGCGACGAGACGGCCG
ACTTCAACATCGCTCAACACATCATCCGCGTTCACCAGAACAAGGCTGAG
GTGTGTGCATCGGGCAGGCACTATAATACCAATACTCGAATGAAAAACGC
TCGTTACATGGCCCCATGTAGCACGCAGTAGGCGTAGTCCTCCTCGCGGG
AAGATCAAAGTCTAACGTTTTATGCAACCCTTTGTCTTACATCCAGTAAG
ATTAAAAGCAGAGTATATCCGGCCTCTGAAGTGGTGTGATCGACCTTTTA
ATCACGTGATTCGCTCCGCAAGCCGCCCTTCCATCGCCCTTGCCCCTCCA
ATAAATCCCTTTCTTCCTTCAACGAGACCCTCTAATCCTTCAATAAACCC
CTGTCCTTGTCCAACAATCCCACGACGGGTAGTAGCACTAAATACATCTC
GATGGAAGTATAGGGAGGCCCCTCTTGAAGATGTAAGGATTGCAGCTCTT
CTCCTGCTGTCGCGTGTTAACCTCCGGGTGGCGTGCAGGCATTGGACCCT
CCGTTCACGGCGATGCAAATGCAGCGCTACATTCGTTTTGCGCGAAGACT
CAATCCCATCATCACTCTCGAAGGGCGGCGAACCATGGTGGAGTGCTACC
GGGCCCTACGGCAGAACGATTGCGTCGGTCGCAACAAGGTGCGTCACGGG
TATTTTTACGGACGATTCAAAAGGTGTAGACCCCTGGAGCGAGCTGTTGG
AAATCGAGGGCGGGAACGAGCACATTTACAACCCAATCTGTTTGCTTGGG
TTAGTTTTCCATTGAAACACTTCCGCTGTTTAGTACGCTTGTACTTTTTT
ACCGAAATAAACCCTGCGTAGCACAAAGCGTGAGCTATATAGTGTGCTAT
ATAGGTAGTGCTGTAATCGACTGAGCCCGCGAGGGTCTTCTGTCACTTTT
GGCAGACGGCGTACCGCATCACAGTGAGGCAGCTGGAGTCCATGATTCGT
CTCAGCGAGGCTCTGGCAAGGCTTCACCTTGACGACCAGGTGCATTTTTG
TCTTCTTCTTTTTTGAGTAGGTGTGAACTAAAATAGTCGGGATGCTTGGA
AGTGTGGATGCATTGTCTCGAAGGTTTTTTTTCGAGCGGCGAAATTGAGT
GGCCATTCTAGTTTCGCTTGAAGGGAATTTTCCTAGAAGAACCGCGCAGA
TGTGTAACCGCAACAAACAAAAAAGCAGTGACAAAAATAGCAATAGGTCA
GTCTGCTCAGTAGAGTATGAACGCTAGCGGGGAATGTCTCCTATCAATGC
AAAACATTTTTCTCGTGAGGTATTCCGTTTCGTGGTGTAAAAGTATTGGG
TTAAGACACCTTCAACAATGTATTCACGGCGGTACACGTAACCAAGCTTT
TCCCGTCAAAATCTGCCCTAGGTGCGTCCCCGCTATGTGAAAGAAGCCTT
CCGACTCTTGAGAAAATCCATTATTCATGTAGAGGCGGAAGACATCATAC
TTGAAGAGGAGAGCGAGGAAGAGAATGTAGAGGCGGGATCAAACGGTGCT
AGAGAGGGAGATGGCGCTGACGGTTCCGGAAACGAAGGGAACGGAGGTGA
CGACAATGGTAACGGTAATGGTGATGAGGATGATGGTCGAGATGGTAAAA
ATGTTTCCAGACGACGAGGCGGGAAACGGCGGCGTTCCGAGGAGCCAGAG
GGGGAGGGAGGTGCAAGAGACGTCGTTGAAGGGGGAGGTAATGAATCGGT
GAGCCAGGACGGACTTCGAGGACGAAAAGAGAACGATACGGACGTCATGG
ACGATGCTGACGGAGGGGATCGGGATGGCGGCGGTACCTATAAAGATGGC
AAGGCCAAGAAGGTCAAGAAAAAGAAGAAGAAACAGCAGATAACCTTCGA
GCAGTATCAGGTGTGTGACTCCGCCAAATATGCCCGCTGCAACGGCCACT
CATCAAGAATATACATGGGTATGTTGCGGTTCGAAGATGCTCTGGCGTAA
ACTTAGGTGATGGGCGGTTAGGTGATGGGCGGTTAGGTGATGGGCGGTTA
TACCACATTTGTTGACGTCAGCTCCCGAATATCACGTTGCCTGAGTCTAG
AAAATCCTACTTCGAAGTTGTAGGCTAACACTTTACTCGCAAGCGTCCGC
TTGGGGTTCCATTCCGGCGACTGACGGCCTGCCATAGCACGTACTTCTCG
CCTCGTTTCAAACGGCGGTTTCTGCTTATTTATCTTTACCGTGTGTCCGC
CATGGTTGATGGCATCCTCATTCTCCAGACGATTACAACAACGCTGGCGA
CGTACATGCGCCAGCGGGAGGATCGCGCCAAGGAAGGCGAGGTGGGGGCG
TTGCAATGGAAGGAGGTGGTGTCGTGGTACTGCCACCAGCACCAGGAGGA
GCTTACTTCGGAGGAGGATCTATCCAACATGCAGAAGCTGGTCAATCAGG
TCGGTTGTGAAACGATCCCACTCGTAACCAAGACCTCAGAGGTTTTGTAT
TTGCAGCCTTTGATCGCACCTAAACGTTTTGACATTTTTTCTTGTGAGAA
GAGGATGCTCAGGAGGTATAGGCGCGTTCTGGTTTTTCTTTAAACACCAT
GATAAATCATTCATAAATAAAAGACAGCGCCTTTGCTAACCACCAAACGT
CGGTCCAGACCCAGGTTTGTGTATCGTTGAACGAAAGTTCAAGTCTGATG
GGGCGCGTCAAGCTCCCTCAATTTGGTCGTTTTCAACTGCAAATCAATGC
TCTAGAGTCACCAAAGAGAGCGGTTGCTTCTTGGGCGCGTGTTGTAGGTT
ATCAAGCGCCTCATCACCAAGGACGGCCTCCTCATTTTCCACGGGGAACA
GGACAACACCACAGCGGACGAGGACAAGCTTATCGCTGTACACCCCAACT
TCGCCTCCGTTTGAACTCGGTCGGCTACCAAGCGCCCCAGAAGTCGTCTC
AGGAGACCCTCGGCATTCACAGACGTCAGAAGAAAATTATTGCCGACCAG
TGTCATATCAGTTGTGACAGTTGTTCTTGGCACGAAACGAG
back to top

Coding sequence (CDS) from alignment at F-distichus_contig10493:1208..8598+

>mRNA_F-distichus_contig10493.431.1 ID=mRNA_F-distichus_contig10493.431.1|Name=mRNA_F-distichus_contig10493.431.1|organism=Fucus distichus monoicous|type=CDS|length=4278bp|location=Sequence derived from alignment at F-distichus_contig10493:1208..8598+ (Fucus distichus monoicous)
ATGCAGGCGAGTAATAGCGCATGCAGGCGAGTAATAGCGCAAGCGTTTTC
GTCGACTGGCAACGGCTGAGAGTGCAAGAAAACGCCGATGAAATCCCCCC
CGGCAGCATGCCGCGATCTTTGGATGTGGTGCTTAGGGGGGAGGCCGTGG
AGAAGGCAAAGGCAGGCGACAAGAAGCGTTTTCGTCGACTGGCAACGGCT
GAGAGTGCAAGAAAACGCCGATGAAATCCCCCCCGGCAGCATGCCGCGAT
CTTTGGATGTGGTGCTTAGGGGGGAGGCCGTGGAGAAGGCAAAGGCAGGC
GACAAGACGGTTTTCACAGGGGCCTTGATCGTGGTCCCCGACTCGAGTGC
GCTAGCGCGAGCCGGAGAGGCAACAGTTGGTGGAAAACCGCCAGGGAAGA
GAGGGACTGAGGGCCCCGACCAGGGGGTCACGGGACTCAAAAAGATGGGA
GTGAAAGAGCTAACTTACAGACGGTTTTCACAGGGGCCTTGATCGTGGTC
CCCGACTCGAGTGCGCTAGCGCGAGCCGGAGAGGCAACAGTTGGTGGAAA
ACCGCCAGGGAAGAGAGGGACTGAGGGCCCCGACCAGGGGGTCACGGGAC
TCAAAAAGATGGGAGTGAAAGAGCTAACTTACAGGACGGCGTTTCTGGCG
AGCTCGGTTTTGCCCGCGGAGCAGGTTTCTGGGGCGTACAACATCCGCGA
CGAGAGCGACGAGGACGGCGTTTCTGGCGAGCTCGGTTTTGCCCGCGGAG
CAGGTTTCTGGGGCGTACAACATCCGCGACGAGAGCGACGAGGCGGGGGC
AGGTGGCGATGGAGTGGAAGAGCTAACCGAGGAGGAAGGGCGTGAAATCC
TTGAAATGAAGAACAGCAACAATATCTACAGCGACATGGTTAATAGCATC
GCGCCCACCGTGTTCGGTCATTCCGAGGCGGGGGCAGGTGGCGATGGAGT
GGAAGAGCTAACCGAGGAGGAAGGGCGTGAAATCCTTGAAATGAAGAACA
GCAACAATATCTACAGCGACATGGTTAATAGCATCGCGCCCACCGTGTTC
GGTCATTCCGAGGTGAAGCGCGGGGTTCTCCTAATGCTCATGGGAGGCGT
ACATAAGCAGACGGCAGAAGGTATGAAACTCCGCGGAGACATCAACGTGT
GCATCGTTGGCGACCCTTCTACGGCCAAGAGCCAATTTCTGAAGTACGTT
CACGGCTTCCTCCCGCGGGCCATCTTCACGTCAGGAAAGGTGAAGCGCGG
GGTTCTCCTAATGCTCATGGGAGGCGTACATAAGCAGACGGCAGAAGGTA
TGAAACTCCGCGGAGACATCAACGTGTGCATCGTTGGCGACCCTTCTACG
GCCAAGAGCCAATTTCTGAAGTACGTTCACGGCTTCCTCCCGCGGGCCAT
CTTCACGTCAGGAAAGGCGTCAAGCGCGGCGGGTCTGACTGCGTCCGTCA
CCAAGGATCACGAAACGGGGGAATTTTGCATCGAGGCCGGCGCGCTCATG
CTCGCGGACAACGGTATCTGCTGCATCGACGAGTTCGACAAGATGGAAAT
CACGGACCAGGCGTCAAGCGCGGCGGGTCTGACTGCGTCCGTCACCAAGG
ATCACGAAACGGGGGAATTTTGCATCGAGGCCGGCGCGCTCATGCTCGCG
GACAACGGTATCTGCTGCATCGACGAGTTCGACAAGATGGAAATCACGGA
CCAGGTCGCCATCCACGAGGCAATGGAGCAGCAAACAATCTCCATCACCA
AGGCCGGCATTCAGGCCACTCTCAACGCTCGAACGTCGATTCTCGCCGCG
GCAAACCCGCTCTACGGGCGCTACGATCGCTCCAAGACGCTCAAGGCAAA
TGTGCAGGTCGCCATCCACGAGGCAATGGAGCAGCAAACAATCTCCATCA
CCAAGGCCGGCATTCAGGCCACTCTCAACGCTCGAACGTCGATTCTCGCC
GCGGCAAACCCGCTCTACGGGCGCTACGATCGCTCCAAGACGCTCAAGGC
AAATGTGCAGCAGATCAGCGCGCCCATCATGAGTCGTTTCGACCTGTTTT
TCGTGGTTTTGGACGAGTGCGACGAGACGGCCGACTTCAACATCGCTCAA
CACATCATCCGCGTTCACCAGAACAAGGCTGAGCAGATCAGCGCGCCCAT
CATGAGTCGTTTCGACCTGTTTTTCGTGGTTTTGGACGAGTGCGACGAGA
CGGCCGACTTCAACATCGCTCAACACATCATCCGCGTTCACCAGAACAAG
GCTGAGGCATTGGACCCTCCGTTCACGGCGATGCAAATGCAGCGCTACAT
TCGTTTTGCGCGAAGACTCAATCCCATCATCACTCTCGAAGGGCGGCGAA
CCATGGTGGAGTGCTACCGGGCCCTACGGCAGAACGATTGCGTCGGTCGC
AACAAGGCATTGGACCCTCCGTTCACGGCGATGCAAATGCAGCGCTACAT
TCGTTTTGCGCGAAGACTCAATCCCATCATCACTCTCGAAGGGCGGCGAA
CCATGGTGGAGTGCTACCGGGCCCTACGGCAGAACGATTGCGTCGGTCGC
AACAAGACGGCGTACCGCATCACAGTGAGGCAGCTGGAGTCCATGATTCG
TCTCAGCGAGGCTCTGGCAAGGCTTCACCTTGACGACCAGACGGCGTACC
GCATCACAGTGAGGCAGCTGGAGTCCATGATTCGTCTCAGCGAGGCTCTG
GCAAGGCTTCACCTTGACGACCAGGTGCGTCCCCGCTATGTGAAAGAAGC
CTTCCGACTCTTGAGAAAATCCATTATTCATGTAGAGGCGGAAGACATCA
TACTTGAAGAGGAGAGCGAGGAAGAGAATGTAGAGGCGGGATCAAACGGT
GCTAGAGAGGGAGATGGCGCTGACGGTTCCGGAAACGAAGGGAACGGAGG
TGACGACAATGGTAACGGTAATGGTGATGAGGATGATGGTCGAGATGGTA
AAAATGTTTCCAGACGACGAGGCGGGAAACGGCGGCGTTCCGAGGAGCCA
GAGGGGGAGGGAGGTGCAAGAGACGTCGTTGAAGGGGGAGGTAATGAATC
GGTGAGCCAGGACGGACTTCGAGGACGAAAAGAGAACGATACGGACGTCA
TGGACGATGCTGACGGAGGGGATCGGGATGGCGGCGGTACCTATAAAGAT
GGCAAGGCCAAGAAGGTCAAGAAAAAGAAGAAGAAACAGCAGATAACCTT
CGAGCAGTATCAGGTGCGTCCCCGCTATGTGAAAGAAGCCTTCCGACTCT
TGAGAAAATCCATTATTCATGTAGAGGCGGAAGACATCATACTTGAAGAG
GAGAGCGAGGAAGAGAATGTAGAGGCGGGATCAAACGGTGCTAGAGAGGG
AGATGGCGCTGACGGTTCCGGAAACGAAGGGAACGGAGGTGACGACAATG
GTAACGGTAATGGTGATGAGGATGATGGTCGAGATGGTAAAAATGTTTCC
AGACGACGAGGCGGGAAACGGCGGCGTTCCGAGGAGCCAGAGGGGGAGGG
AGGTGCAAGAGACGTCGTTGAAGGGGGAGGTAATGAATCGGTGAGCCAGG
ACGGACTTCGAGGACGAAAAGAGAACGATACGGACGTCATGGACGATGCT
GACGGAGGGGATCGGGATGGCGGCGGTACCTATAAAGATGGCAAGGCCAA
GAAGGTCAAGAAAAAGAAGAAGAAACAGCAGATAACCTTCGAGCAGTATC
AGACGATTACAACAACGCTGGCGACGTACATGCGCCAGCGGGAGGATCGC
GCCAAGGAAGGCGAGGTGGGGGCGTTGCAATGGAAGGAGGTGGTGTCGTG
GTACTGCCACCAGCACCAGGAGGAGCTTACTTCGGAGGAGGATCTATCCA
ACATGCAGAAGCTGGTCAATCAGACGATTACAACAACGCTGGCGACGTAC
ATGCGCCAGCGGGAGGATCGCGCCAAGGAAGGCGAGGTGGGGGCGTTGCA
ATGGAAGGAGGTGGTGTCGTGGTACTGCCACCAGCACCAGGAGGAGCTTA
CTTCGGAGGAGGATCTATCCAACATGCAGAAGCTGGTCAATCAGGTTATC
AAGCGCCTCATCACCAAGGACGGCCTCCTCATTTTCCACGGGGAACAGGA
CAACACCACAGCGGACGAGGACAAGCTTATCGCTGTACACCCCAACTTCG
CCTCCGTTTGAGTTATCAAGCGCCTCATCACCAAGGACGGCCTCCTCATT
TTCCACGGGGAACAGGACAACACCACAGCGGACGAGGACAAGCTTATCGC
TGTACACCCCAACTTCGCCTCCGTTTGA
back to top