mRNA_F-distichus_contig104687.415.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig104687.415.1 vs. uniprot
Match: D7FLG8_ECTSI (Transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG8_ECTSI) HSP 1 Score: 159 bits (403), Expect = 2.250e-46 Identity = 77/105 (73.33%), Postives = 91/105 (86.67%), Query Frame = 1
Query: 22 QDLPDVKGDRKYKISTFASKKGVKFTARAACAVLALNYVSAIVQGSLSPAGAFNKRVMVGGHALLLVGLGASLRRLVPDSQESIKAFYKRIWDLFYLEYVLYPFI 336
+DLPDVKGD++Y ISTFASK+GVKFTARAA A+LA+NY+SAI +G LSPAG FN+RVMVGGH+ LL LG ++RRLVPD Q SIK FY RIWDLFYLEY +YPF+
Sbjct: 185 KDLPDVKGDKEYNISTFASKRGVKFTARAASAILAVNYLSAIAEGILSPAGTFNRRVMVGGHSALLAILGLAIRRLVPDDQGSIKRFYLRIWDLFYLEYAMYPFM 289
BLAST of mRNA_F-distichus_contig104687.415.1 vs. uniprot
Match: A0A6H5JNV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV9_9PHAE) HSP 1 Score: 162 bits (409), Expect = 5.210e-46 Identity = 78/105 (74.29%), Postives = 93/105 (88.57%), Query Frame = 1
Query: 22 QDLPDVKGDRKYKISTFASKKGVKFTARAACAVLALNYVSAIVQGSLSPAGAFNKRVMVGGHALLLVGLGASLRRLVPDSQESIKAFYKRIWDLFYLEYVLYPFI 336
+DLPDVKGD++YKISTFASK+GVKFTARAA AVLA+NY+SAI +G+LSPAG FN+RVMVGGH+ LL LG ++R+LVPD Q SIK FY RIWDLFYLEY +YPF+
Sbjct: 309 KDLPDVKGDKEYKISTFASKRGVKFTARAASAVLAVNYLSAIAEGALSPAGTFNRRVMVGGHSALLAILGLAIRKLVPDDQGSIKRFYLRIWDLFYLEYAMYPFM 413
BLAST of mRNA_F-distichus_contig104687.415.1 vs. uniprot
Match: A0A835YU62_9STRA (Tocopherol polyprenyltransferase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU62_9STRA) HSP 1 Score: 127 bits (318), Expect = 2.270e-33 Identity = 64/105 (60.95%), Postives = 80/105 (76.19%), Query Frame = 1
Query: 22 QDLPDVKGDRKYKISTFASKKGVKFTARAACAVLALNYVSAIVQGSLSPAGAFNKRVMVGGHALLLVGLGASLRRLVPDSQESIKAFYKRIWDLFYLEYVLYPFI 336
+DLPDV+GD++Y ISTFA + GV A AAC VL LNYVSAIV+ +L PA FNK +M+ GH+ + L + +L PDS+ES+KAFY RIWDLFYLEY+LYPFI
Sbjct: 215 KDLPDVEGDKQYNISTFAVRAGVARIANAACIVLGLNYVSAIVEAALVPA--FNKAIMIAGHSAFALYLYRARTKLQPDSKESVKAFYARIWDLFYLEYLLYPFI 317
BLAST of mRNA_F-distichus_contig104687.415.1 vs. uniprot
Match: W7TS50_9STRA (Tocopherol polyprenyltransferase-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS50_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.050e-32 Identity = 63/105 (60.00%), Postives = 78/105 (74.29%), Query Frame = 1
Query: 22 QDLPDVKGDRKYKISTFASKKGVKFTARAACAVLALNYVSAIVQGSLSPAGAFNKRVMVGGHALLLVGLGASLRRLVPDSQESIKAFYKRIWDLFYLEYVLYPFI 336
+DLPD +GD+KY + TFA++ GVK AR A VL LNY+SAI QG ++P+GAF + VMVGGH +L L ++L PDS SIKAFYK IWDLFYLEY LYPF+
Sbjct: 298 KDLPDTEGDKKYNVRTFATRVGVKNMARGAAGVLFLNYLSAIAQGVVNPSGAFRQWVMVGGHTVLAALLIQRYKKLEPDSLASIKAFYKSIWDLFYLEYALYPFL 402
BLAST of mRNA_F-distichus_contig104687.415.1 vs. uniprot
Match: A0A7S2TSF5_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TSF5_9EUKA) HSP 1 Score: 112 bits (280), Expect = 5.040e-30 Identity = 56/104 (53.85%), Postives = 68/104 (65.38%), Query Frame = 1
Query: 25 DLPDVKGDRKYKISTFASKKGVKFTARAACAVLALNYVSAIVQGSLSPAGAFNKRVMVGGHALLLVGLGASLRRLVPDSQESIKAFYKRIWDLFYLEYVLYPFI 336
DLPD+KGD+++ + TFAS+ G K A AC L NYV AI S G FN +MVG HA L + L + ++L PD Q SIK FY RIWDLFYLEY LYPF+
Sbjct: 1 DLPDIKGDKEFGVKTFASRLGAKKVALMACLTLGANYVHAIGTALFSQPGTFNTPLMVGAHAALALMLARNHKKLDPDDQTSIKRFYARIWDLFYLEYALYPFL 104
BLAST of mRNA_F-distichus_contig104687.415.1 vs. uniprot
Match: A0A7S2RLT5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RLT5_9STRA) HSP 1 Score: 110 bits (276), Expect = 2.300e-29 Identity = 59/105 (56.19%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 22 QDLPDVKGDRKYKISTFASKKGVKFTARAACAVLALNYVSAIVQGSLSPAGAFNKRVMVGGHALLLVGLGASLRRLVPDSQESIKAFYKRIWDLFYLEYVLYPFI 336
+DLPD++GDR Y I TFA+K GV A+ A L LNYV AI G LS AG FNK M+GGH L + L R L P S S+K +YK IWDLFYLEYVLY I
Sbjct: 4 KDLPDIEGDRAYNIDTFATKVGVPNIAKGATVCLLLNYVHAIGTGVLSTAGTFNKIPMIGGHIALALMLLNHFRSLTPTSIPSVKTYYKHIWDLFYLEYVLYTLI 108
BLAST of mRNA_F-distichus_contig104687.415.1 vs. uniprot
Match: A0A7S2UTD4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTD4_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.040e-27 Identity = 61/108 (56.48%), Postives = 71/108 (65.74%), Query Frame = 1
Query: 13 AFYQDLPDVKGDRKYKISTFASKKGVKFTARAACAVLALNYVSAIVQGSLSPAGAFNKRVMVGGHALLLVGLGASLRRLVPDSQESIKAFYKRIWDLFYLEYVLYPFI 336
A +DLPDV+GDRKY I+T +KGV A+ A VL NY+SAIV G ++PA FNK VMV GHAL V L + L S S+K FYK IWDLFY EY LYPFI
Sbjct: 280 AITKDLPDVEGDRKYNINTLTVRKGVPAVAKLATGVLLANYISAIVNGIVAPAQQFNKVVMVSGHALFSVWLIKLYKDLNASSTTSVKKFYKGIWDLFYAEYCLYPFI 387
BLAST of mRNA_F-distichus_contig104687.415.1 vs. uniprot
Match: A0A7S2C156_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C156_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.630e-27 Identity = 53/105 (50.48%), Postives = 70/105 (66.67%), Query Frame = 1
Query: 22 QDLPDVKGDRKYKISTFASKKGVKFTARAACAVLALNYVSAIVQGSLSPAGAFNKRVMVGGHALLLVGLGASLRRLVPDSQESIKAFYKRIWDLFYLEYVLYPFI 336
+DLPD++GD+K+ + T +++ GVK A AA AVL LNY A+ L+ G +N M GGHAL + L R+ PDS SIK +YKRIWDLFYLEY++Y FI
Sbjct: 124 KDLPDIEGDKKFAVETLSTRLGVKPIATAATAVLLLNYAGAVATALLAGPGVYNTAFMAGGHALAGLWLALGFRKFQPDSMASIKGYYKRIWDLFYLEYLMYVFI 228
BLAST of mRNA_F-distichus_contig104687.415.1 vs. uniprot
Match: A0A6U3TIV9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3TIV9_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.010e-27 Identity = 53/105 (50.48%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 22 QDLPDVKGDRKYKISTFASKKGVKFTARAACAVLALNYVSAIVQGSLSPAGAFNKRVMVGGHALLLVGLGASLRRLVPDSQESIKAFYKRIWDLFYLEYVLYPFI 336
+DLPD++GD+K++I T +++ GV A+ A +L NY A+ L+P G F++ M G H L L S R+L P+S +SIKAFYKRIWDLFYLEY LYPFI
Sbjct: 288 KDLPDIEGDKKFEIETLSTRYGVSLIAKVATGLLLANYAGAVATALLAPPGTFHRAFMAGSHILAGTVLAVSARKLDPNSMDSIKAFYKRIWDLFYLEYCLYPFI 392
BLAST of mRNA_F-distichus_contig104687.415.1 vs. uniprot
Match: A0A7S2HIJ7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HIJ7_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.800e-27 Identity = 57/105 (54.29%), Postives = 70/105 (66.67%), Query Frame = 1
Query: 22 QDLPDVKGDRKYKISTFASKKGVKFTARAACAVLALNYVSAIVQGSLSPAGAFNKRVMVGGHALLLVGLGASLRRLVPDSQESIKAFYKRIWDLFYLEYVLYPFI 336
+DLPD+ GD+ Y I TFA+K GV A A ++L LNY+ AI+ G LS AG + M+GGHA L L A ++L PDS ES+K FYK IWDLFYLEY LY I
Sbjct: 162 KDLPDIDGDKAYNIETFATKLGVAKIAAGATSLLFLNYIHAILTGILSKAGTYKTIPMLGGHAALACVLIARFKQLKPDSMESVKKFYKHIWDLFYLEYGLYTLI 266 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig104687.415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig104687.415.1 >prot_F-distichus_contig104687.415.1 ID=prot_F-distichus_contig104687.415.1|Name=mRNA_F-distichus_contig104687.415.1|organism=Fucus distichus monoicous|type=polypeptide|length=113bp VFNFAFYQDLPDVKGDRKYKISTFASKKGVKFTARAACAVLALNYVSAIVback to top mRNA from alignment at F-distichus_contig104687:1120..1858- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig104687.415.1 ID=mRNA_F-distichus_contig104687.415.1|Name=mRNA_F-distichus_contig104687.415.1|organism=Fucus distichus monoicous|type=mRNA|length=739bp|location=Sequence derived from alignment at F-distichus_contig104687:1120..1858- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig104687:1120..1858- >mRNA_F-distichus_contig104687.415.1 ID=mRNA_F-distichus_contig104687.415.1|Name=mRNA_F-distichus_contig104687.415.1|organism=Fucus distichus monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at F-distichus_contig104687:1120..1858- (Fucus distichus monoicous)back to top |