mRNA_F-distichus_contig104649.413.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig104649.413.1
Unique NamemRNA_F-distichus_contig104649.413.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig104649.413.1 vs. uniprot
Match: D8LS24_ECTSI (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS24_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 9.920e-51
Identity = 90/135 (66.67%), Postives = 103/135 (76.30%), Query Frame = 1
Query:    1 GVFYDLGCGTGKPVFAAAAASAPGGLFRRCVGVEILGGLHDICQKALERWNQGAKDAVA---GRGPAAEVEFVCGDFTALDWSDGKWDLVFANSTCFDEALMRNLARGAEALKEGAIVVTTTDPLPSAAFEVVQE 396
            GVFYDLGCGTGKPVFAAA        + RC+G+EILG LH IC KALERW  G +  V     +G AAE+EFVCGDFT LDWSDG  D+VFANSTCF + LM+ LA+GA ALKEGAIVVT TDP+PS AFEV++E
Sbjct:  128 GVFYDLGCGTGKPVFAAATMHP----WHRCIGMEILGDLHGICLKALERWEGGLRHKVTVGETKGGAAEIEFVCGDFTVLDWSDG--DVVFANSTCFGDDLMKKLAQGAAALKEGAIVVTMTDPVPSPAFEVLEE 256          
BLAST of mRNA_F-distichus_contig104649.413.1 vs. uniprot
Match: A0A6H5JVM2_9PHAE (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVM2_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 8.840e-50
Identity = 89/135 (65.93%), Postives = 101/135 (74.81%), Query Frame = 1
Query:    1 GVFYDLGCGTGKPVFAAAAASAPGGLFRRCVGVEILGGLHDICQKALERWNQGAKDAVA---GRGPAAEVEFVCGDFTALDWSDGKWDLVFANSTCFDEALMRNLARGAEALKEGAIVVTTTDPLPSAAFEVVQE 396
            GVFYDLGCGTGKPVF AAA       + RC+GVEIL  LH IC KALERW  G +  V     +G AAE+EFVCGDFT LDWSDG  D+VFANSTCF + LM+ LA+ A ALKEGAIVVT TDP+PS AFEV++E
Sbjct:   47 GVFYDLGCGTGKPVFVAAAMHP----WHRCIGVEILRDLHGICLKALERWEGGLRHKVTVGETKGGAAEIEFVCGDFTVLDWSDG--DVVFANSTCFGDDLMKKLAQRAAALKEGAIVVTMTDPVPSPAFEVLEE 175          
BLAST of mRNA_F-distichus_contig104649.413.1 vs. uniprot
Match: A0A7S1U404_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U404_9STRA)

HSP 1 Score: 122 bits (307), Expect = 4.570e-32
Identity = 66/128 (51.56%), Postives = 79/128 (61.72%), Query Frame = 1
Query:    1 GVFYDLGCGTGKPVFAAAAASAPGGLFRRCVGVEILGGLHDICQKALERWNQGAKDAVAGRGPAAEVEFVCGDFTALDWSDGKWDLVFANSTCFDEALMRNLARGAEALKEGAIVVTTTDPLPSAAFE 384
            G FYD+GCGTGKPVFAAA        F +CVG+EIL GL+ I    ++ WN   + A+       E+ F+ GD T LDW DG  D+VF NSTCF + LM  LA  AE LK GA V+TTT  LPS  FE
Sbjct:  102 GNFYDIGCGTGKPVFAAALLHR----FDKCVGIEILSGLYGISMHIMDIWNTQVQPALPRTNQETEIGFIHGDATVLDWRDG--DVVFMNSTCFGDELMETLAAQAEGLKPGAFVITTTRKLPSEEFE 223          
BLAST of mRNA_F-distichus_contig104649.413.1 vs. uniprot
Match: A0A7S2UU63_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU63_9STRA)

HSP 1 Score: 115 bits (289), Expect = 6.330e-31
Identity = 62/119 (52.10%), Postives = 79/119 (66.39%), Query Frame = 1
Query:    1 GVFYDLGCGTGKPVFAAAAASAPGGLFRRCVGVEILGGLHDICQKALERWNQGAKDAVAGRGPAAEVEFVCGDFTALDWSDGKWDLVFANSTCFDEALMRNLARGAEALKEGAIVVTTT 357
            G++ D+GCGTGKPVFAAA        F  C+G+EIL GLH IC K L +WN+   D +     + +V FV GD T LDWS    D+VFANSTCFD+ LM++LA  +E L+ GA V+TTT
Sbjct:    2 GMYVDIGCGTGKPVFAAALLHD----FDVCLGIEILEGLHGICTKVLRKWNE-VGDLLPAHKMSTDVRFVHGDATVLDWSAA--DVVFANSTCFDDQLMKSLALKSEDLRTGAFVITTT 113          
BLAST of mRNA_F-distichus_contig104649.413.1 vs. uniprot
Match: A0A7S2X7Y4_9EUKA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X7Y4_9EUKA)

HSP 1 Score: 118 bits (296), Expect = 2.550e-30
Identity = 63/134 (47.01%), Postives = 84/134 (62.69%), Query Frame = 1
Query:    1 GVFYDLGCGTGKPVFAAAAASAPGGLFRRCVGVEILGGLHDICQKALERWNQGAKDAVAGRGPAAEVEFVCGDFTALDWSDGKWDLVFANSTCFDEALMRNLARGAEALKEGAIVVTTTDPLPSAAFEVVQEVR 402
            GVFYD+G GTGKP FAAA        F +  GVEIL GLH I    LERWN+  +  +       +++F+CGD  A DWSD   DL FANSTCFD  LM+ LA+ A+++K+ +  +T T  LPS A++V++  R
Sbjct:  102 GVFYDIGSGTGKPTFAAALLHD----FDKAYGVEILEGLHKISVTLLERWNKAIRPNLNKAKQETDIQFICGDAVAYDWSDA--DLCFANSTCFDSKLMQQLAKAADSMKKDSFFITFTKELPSKAWKVLEAER 229          
BLAST of mRNA_F-distichus_contig104649.413.1 vs. uniprot
Match: A0A6H5JPB2_9PHAE (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPB2_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 2.570e-27
Identity = 64/134 (47.76%), Postives = 82/134 (61.19%), Query Frame = 1
Query:    1 GVFYDLGCGTGKPVFAAAAASAPGGLFRRCVGVEILGGLHDICQKALERWNQGAKDAVAGRGPAAEVEFVCGD---FTALDWSDGKWDLVFANSTCFDEALMRNLARGAEALKEGAIVVTTTDPLPSAAFEVVQ 393
            G FYD+G GTGKPVFAAA        F + VG+EIL GL+   ++ L+ W+ G +D V       +VEF  GD       DWSD    +VFANSTCFD+ LMR LA  A ALK+G I +T T  LP+A F+V++
Sbjct:  172 GAFYDIGSGTGKPVFAAAILHP----FHKAVGIEILEGLYSTSRELLKAWDGGIRDRVGHGQERTKVEFFLGDALDMNVCDWSDAT--VVFANSTCFDDTLMRRLASAATALKKGTIFITLTKRLPAAYFKVLE 299          
BLAST of mRNA_F-distichus_contig104649.413.1 vs. uniprot
Match: A0A7S2GDF8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GDF8_9STRA)

HSP 1 Score: 105 bits (263), Expect = 4.200e-26
Identity = 64/134 (47.76%), Postives = 78/134 (58.21%), Query Frame = 1
Query:    1 GVFYDLGCGTGKPVFAAAAASAPGGLFRRCVGVEILGGLHDICQKALERWNQGAKDAVAGRGPAAEVEFVCGDFT---ALDWSDGKWDLVFANSTCFDEALMRNLARGAEALKEGAIVVTTTDPLPSAAFEVVQ 393
            GVFYD+G GTGKP  AAA        F    GVEIL GLH   Q+    WN  A + + G       EF  GD T    LDWS+G  +L+FANSTCFD+ALM  +A  A  LK+G+I +T T  LPS  FEV++
Sbjct:   27 GVFYDIGSGTGKPAIAAALLHP----FDLVSGVEILEGLHSSSQELAAVWNNTAHELLPGDAIIPRAEFTLGDGTDMGCLDWSNG--NLIFANSTCFDDALMEKIADKAALLKKGSIFITFTKKLPSPYFEVLE 154          
BLAST of mRNA_F-distichus_contig104649.413.1 vs. uniprot
Match: A0A482RJR1_9ARCH (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RJR1_9ARCH)

HSP 1 Score: 103 bits (258), Expect = 3.030e-25
Identity = 63/133 (47.37%), Postives = 82/133 (61.65%), Query Frame = 1
Query:    1 GVFYDLGCGTGKPVFAAAAASAPGGLFRRCVGVEILGGLHDICQKALERWNQGAKDAVAGRGPAAEVE----FVCGDFTALDWSDGKWDLVFANSTCFDEALMRNLARGAEALKEGAIVVTTTDPLPSAAFEV 387
            G FYD+G GTGK VF AA   A    +  CVG+E+L GLH+   + L RW+    D +  + P   VE    F+  D TA DWSDG  D+VFANSTCFDEALM +LA  A+ ++ G+ +VT T  LPS  ++V
Sbjct:   24 GKFYDIGSGTGKAVFFAALVHA----WDTCVGIELLSGLHEASLEMLSRWHS---DEIRPKLPPHAVECPIHFLQDDITAYDWSDG--DVVFANSTCFDEALMLSLATTADRMRLGSFMVTFTKRLPSFKWKV 147          
BLAST of mRNA_F-distichus_contig104649.413.1 vs. uniprot
Match: A0A7S2RS53_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RS53_9STRA)

HSP 1 Score: 103 bits (258), Expect = 5.350e-24
Identity = 63/137 (45.99%), Postives = 85/137 (62.04%), Query Frame = 1
Query:    1 GVFYDLGCGTGKPVFAAAAASAPGGLFRRCVGVEILGGLHDICQKALERWNQGAKDAVAGRGPAAE--VEFVCGDFT---ALDWSDGKWDLVFANSTCFDEALMRNLARGAEALKEGAIVVTTTDPLPSAAFEVVQE 396
            G+FYD+G GTGKP  AAA        F    GVEIL GL++   +  ER+    K  +A  G   E  VEFV GD T    LDW+DG  D+VFANSTCFD++LM+ +A+ A  +K G+I +T T  LPS +F+V+++
Sbjct:  144 GIFYDIGSGTGKPAIAAAVLHP----FESVGGVEILEGLYETSLQVAERFTAVGKPMLADAGETVETRVEFVHGDVTDLATLDWTDG--DVVFANSTCFDDSLMQAVAKLAGGMKMGSIFITLTKRLPSKSFKVLEQ 274          
BLAST of mRNA_F-distichus_contig104649.413.1 vs. uniprot
Match: A0A6T7BPQ5_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7BPQ5_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.900e-23
Identity = 62/135 (45.93%), Postives = 79/135 (58.52%), Query Frame = 1
Query:    4 VFYDLGCGTGKPVFAAAAASAPGGLFRRCVGVEILGGLHDICQKALERWNQGAKDAV--AGRGPAAEVEFVCGDFT---ALDWSDGKWDLVFANSTCFDEALMRNLARGAEALKEGAIVVTTTDPLPSAAFEVVQ 393
            +FYD+G GTGKP  AAA        F R  GVEIL GL+         W    K+ +  AG+  A E+ F  GD T     DWSDG  D++FANSTCFD+ALM+ +A  A  LK+GA+ +T T  LPS  FEV++
Sbjct:    1 LFYDIGSGTGKPAVAAALLHP----FERVHGVEILEGLYRTSLDLAATWETRGKEILEAAGQEHATEIGFTHGDATDPEVCDWSDG--DVLFANSTCFDDALMKKVAGQAVTLKKGAVFITFTKRLPSHHFEVLE 129          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig104649.413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS24_ECTSI9.920e-5166.67Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A6H5JVM2_9PHAE8.840e-5065.93Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S1U404_9STRA4.570e-3251.56Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S2UU63_9STRA6.330e-3152.10Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S2X7Y4_9EUKA2.550e-3047.01Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A6H5JPB2_9PHAE2.570e-2747.76Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S2GDF8_9STRA4.200e-2647.76Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A482RJR1_9ARCH3.030e-2547.37Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S2RS53_9STRA5.350e-2445.99Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A6T7BPQ5_9STRA1.900e-2345.93Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig104649contigF-distichus_contig104649:238..1303 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score174.5
Seed ortholog evalue3.4e-41
Seed eggNOG ortholog2880.D8LS24
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Histone methylation protein DOT1
EggNOG OGs2BR00@1,2S1VE@2759
Ec32 ortholog descriptionHistone H3-K79 methyltransferase
Ec32 orthologEc-08_001840.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size402
Cds size402
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig104649.413.1prot_F-distichus_contig104649.413.1Fucus distichus monoicouspolypeptideF-distichus_contig104649 238..1303 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928966.1758296-CDS-F-distichus_contig104649:237..3891622928966.1758296-CDS-F-distichus_contig104649:237..389Fucus distichus monoicousCDSF-distichus_contig104649 238..389 -
1690885085.278125-CDS-F-distichus_contig104649:237..3891690885085.278125-CDS-F-distichus_contig104649:237..389Fucus distichus monoicousCDSF-distichus_contig104649 238..389 -
1622928966.203774-CDS-F-distichus_contig104649:574..6801622928966.203774-CDS-F-distichus_contig104649:574..680Fucus distichus monoicousCDSF-distichus_contig104649 575..680 -
1690885085.2879748-CDS-F-distichus_contig104649:574..6801690885085.2879748-CDS-F-distichus_contig104649:574..680Fucus distichus monoicousCDSF-distichus_contig104649 575..680 -
1622928966.2264907-CDS-F-distichus_contig104649:1159..13031622928966.2264907-CDS-F-distichus_contig104649:1159..1303Fucus distichus monoicousCDSF-distichus_contig104649 1160..1303 -
1690885085.295711-CDS-F-distichus_contig104649:1159..13031690885085.295711-CDS-F-distichus_contig104649:1159..1303Fucus distichus monoicousCDSF-distichus_contig104649 1160..1303 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig104649.413.1

>prot_F-distichus_contig104649.413.1 ID=prot_F-distichus_contig104649.413.1|Name=mRNA_F-distichus_contig104649.413.1|organism=Fucus distichus monoicous|type=polypeptide|length=134bp
GVFYDLGCGTGKPVFAAAAASAPGGLFRRCVGVEILGGLHDICQKALERW
NQGAKDAVAGRGPAAEVEFVCGDFTALDWSDGKWDLVFANSTCFDEALMR
NLARGAEALKEGAIVVTTTDPLPSAAFEVVQEVR
back to top

mRNA from alignment at F-distichus_contig104649:238..1303-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig104649.413.1 ID=mRNA_F-distichus_contig104649.413.1|Name=mRNA_F-distichus_contig104649.413.1|organism=Fucus distichus monoicous|type=mRNA|length=1066bp|location=Sequence derived from alignment at F-distichus_contig104649:238..1303- (Fucus distichus monoicous)
GGGGTTTTCTACGACCTTGGATGCGGTACTGGTAAGCCTGTCTTCGCCGC CGCGGCCGCCTCTGCACCCGGCGGGTTGTTCCGTCGTTGCGTCGGGGTGG AGATCTTGGGCGGCCTCCACGACATCTGCCAGAAGGCGTTAGAGGTGCGG TCGCTTCACGGAGAGGGAGGGCCTCTCGCAGATGAGCTTTAGATTATTGT TCACTCTCTCTTGGATTCAAGAGTAAAAGCTGGCTAGCGTGTGCTCGCTA GAGCTCTCTAGGCCCTCGTACGATCGCCGTGTTGTCGGCAAGAAGAGAAG AGCCTATAATAGTATGTTAGACTATAATAATAATAATAATAATATTATAA TACCTGGTAGTAGATTGTTATTAATAATGTGGGTTGAAACCGACTGTGCG AAACGTTGCTTTACAAGACATAATATATGTCTGTTTTGGCACACAACGTG GGAAAAGTATCTTCTCCGTGCGATGATAAGGACTAAAAGGGAAGACGGCG AACATTCGATCGACAGAGAGAGGGAGATTTTATTTACTCTGTCACCTCGC ATCGCCTGCCCTGCCCTGCCCTACCCCCCGCTCCTCGTGGAAACGCACAC CGATGTGGTGGGAGTCTCTACAGAGGTGGAACCAAGGCGCCAAGGACGCC GTCGCGGGGCGGGGCCCGGCGGCGGAGGTCGAGTTTGTCTGCGGGGACTT CACGGCCCTGGATTGGTCAGACGGCAAGTGTGAGGTGGCGGGATGTTGCA CACATGCAGGGGAGGCGGTATGAAAACAACGCTTCCAGGGGACGTTATGT CAACATCCCCTCTCGCCCGTCCCTTTCTTTGGTTGGAGAGTGACTCTGTC GCGTTCGGTGCTGCTCTGGCGTGACTTTCGGTGCTGGTTGCACGCTCGTT TTTGAAAAAAAAAGGGGACTTGGTTTTCGCGAACAGCACGTGCTTCGACG AGGCCTTGATGAGAAACCTGGCTCGCGGAGCGGAGGCCCTCAAGGAAGGG GCCATCGTGGTCACCACTACGGACCCTCTACCCTCCGCGGCGTTCGAGGT AGTCCAAGAGGTGAGG
back to top

Coding sequence (CDS) from alignment at F-distichus_contig104649:238..1303-

>mRNA_F-distichus_contig104649.413.1 ID=mRNA_F-distichus_contig104649.413.1|Name=mRNA_F-distichus_contig104649.413.1|organism=Fucus distichus monoicous|type=CDS|length=804bp|location=Sequence derived from alignment at F-distichus_contig104649:238..1303- (Fucus distichus monoicous)
GGGGTTTTCTACGACCTTGGATGCGGTACTGGTAAGCCTGTCTTCGCCGC
CGCGGCCGCCTCTGCACCCGGCGGGTTGTTCCGTCGTTGCGTCGGGGTGG
AGATCTTGGGCGGCCTCCACGACATCTGCCAGAAGGCGTTAGAGGGGGTT
TTCTACGACCTTGGATGCGGTACTGGTAAGCCTGTCTTCGCCGCCGCGGC
CGCCTCTGCACCCGGCGGGTTGTTCCGTCGTTGCGTCGGGGTGGAGATCT
TGGGCGGCCTCCACGACATCTGCCAGAAGGCGTTAGAGAGGTGGAACCAA
GGCGCCAAGGACGCCGTCGCGGGGCGGGGCCCGGCGGCGGAGGTCGAGTT
TGTCTGCGGGGACTTCACGGCCCTGGATTGGTCAGACGGCAAGTAGGTGG
AACCAAGGCGCCAAGGACGCCGTCGCGGGGCGGGGCCCGGCGGCGGAGGT
CGAGTTTGTCTGCGGGGACTTCACGGCCCTGGATTGGTCAGACGGCAAGT
GGGACTTGGTTTTCGCGAACAGCACGTGCTTCGACGAGGCCTTGATGAGA
AACCTGGCTCGCGGAGCGGAGGCCCTCAAGGAAGGGGCCATCGTGGTCAC
CACTACGGACCCTCTACCCTCCGCGGCGTTCGAGGTAGTCCAAGAGGTGA
GGGGGACTTGGTTTTCGCGAACAGCACGTGCTTCGACGAGGCCTTGATGA
GAAACCTGGCTCGCGGAGCGGAGGCCCTCAAGGAAGGGGCCATCGTGGTC
ACCACTACGGACCCTCTACCCTCCGCGGCGTTCGAGGTAGTCCAAGAGGT
GAGG
back to top