mRNA_F-distichus_contig10457.406.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10457.406.1 vs. uniprot
Match: A0A6H5L6G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G6_9PHAE) HSP 1 Score: 388 bits (996), Expect = 1.520e-132 Identity = 191/238 (80.25%), Postives = 211/238 (88.66%), Query Frame = 1
Query: 7 VVASVQTLGRRGSGTARLRKYASYGGIVIVDEAHHVKARGMYDDVLNHLGVGSACEGKTKDDRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGITNGYLVDVHAYAVVTATNIAAVPVRQEDFSSGALSIAVNNDLRNEAAARALIEYGAGEG-----KKTPRSIAFCADVRHAHDLASVLNHHGISALAIDGGMKKEQRSRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVM 705
VVASVQTLGRRGSG ARLRK+A+YGG+V+VDEAHHVKA GMYDDVLN LGVGSAC G+T+ RLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGI NGYLVD+HA+AV T T+IAA+P R +DFS+GALS AVNND+RNEAAARA++E+GAGE KK+PR IAFC DVRHAHDLA VLN H ISA+A+DGGM K+ R RALAAFRSGEVSTLTNCGVLTEGFDAP CDTIVM
Sbjct: 110 VVASVQTLGRRGSGAARLRKFANYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSAGALSTAVNNDVRNEAAARAMLEFGAGEPLSSRKKKSPRGIAFCVDVRHAHDLARVLNEHNISAMAVDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPSCDTIVM 347
BLAST of mRNA_F-distichus_contig10457.406.1 vs. uniprot
Match: D8LIE4_ECTSI (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE4_ECTSI) HSP 1 Score: 323 bits (829), Expect = 2.590e-105 Identity = 158/198 (79.80%), Postives = 175/198 (88.38%), Query Frame = 1
Query: 127 MYDDVLNHLGVGSACEGKTKDDRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGITNGYLVDVHAYAVVTATNIAAVPVRQEDFSSGALSIAVNNDLRNEAAARALIEYGAGEG-----KKTPRSIAFCADVRHAHDLASVLNHHGISALAIDGGMKKEQRSRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVM 705
MYDDVLN LGVGSAC G+T+ RLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGI NGYLVD+HA+AV T T+IAA+P R +DFS+GALS AVNND+RNEAAARA++E+GAGE KK+PR IAFCADVRHAHDLA VLN H ISA+A+DGGM K+ R RALAAFRSGEVSTLTNCGVLTEGFDAP+CDTIVM
Sbjct: 1 MYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSAGALSTAVNNDVRNEAAARAMLEFGAGEPSSSGKKKSPRGIAFCADVRHAHDLARVLNEHNISAMAVDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPYCDTIVM 198
BLAST of mRNA_F-distichus_contig10457.406.1 vs. uniprot
Match: A0A3M1F660_9DELT (DEAD/DEAH box helicase n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1F660_9DELT) HSP 1 Score: 149 bits (377), Expect = 2.420e-38 Identity = 93/234 (39.74%), Postives = 130/234 (55.56%), Query Frame = 1
Query: 7 VVASVQTLGRRGSGTARLRKYASYG-GIVIVDEAHHVKARGMYDDVLNHLGVGSACEGKTKDDRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGITNGYLVDVHAYAVVTATNIAAVPVRQEDFSSGALSIAVNNDLRNEAAARALIEYGAGEGKKTPRSIAFCADVRHAHDLASVLNHHGISALAIDGGMKKEQRSRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVM 705
VVASV TLGR +G++RL ++ ++++DEAHH A Y +L + V + ++ LL G+TATPRR D + L F + DL I GYLV + AY V + +++ V R DF LS VN RN+ +A +E G ++I F DVRHA+DLA V +G+ L + G M KE+R L AFRSG + +TNC +LTEGFD P +TI+M
Sbjct: 108 VVASVATLGR-SNGSSRLGRFDPQAFRLIVIDEAHHAVAP-TYRAILEYFDVFAPPSPRSP---LLVGYTATPRRGDEVGLESIFQEIVYHRDLREMIEAGYLVALRAYKVTSEVDLSPVHTRHGDFVVNELSDRVNTIDRNDLIVKAYLEKAYGS-----KTIVFTVDVRHAYDLALVFQRYGVPCLPVCGEMPKEERRDVLEAFRSGRIQVITNCNLLTEGFDDPEVETIIM 331
BLAST of mRNA_F-distichus_contig10457.406.1 vs. uniprot
Match: A0A2V8ZVD1_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8ZVD1_9BACT) HSP 1 Score: 140 bits (354), Expect = 4.730e-35 Identity = 89/233 (38.20%), Postives = 120/233 (51.50%), Query Frame = 1
Query: 7 VVASVQTLGRRGSGTARLRKYASYGGIVIVDEAHHVKARGMYDDVLNHLGVGSACEGKTKDDRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGITNGYLVDVHAYAVVTATNIAAVPVRQEDFSSGALSIAVNNDLRNEAAARALIEYGAGEGKKTPRSIAFCADVRHAHDLASVLNHHGISALAIDGGMKKEQRSRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVM 705
V+ASV TL R G+ +RL+ IV+VDEAHH A Y + +H G+ + R L GFTATPRR D L F D+ I + YL + + V + ++ V VR DF L+ AVN LRN +A ++ G R+I FC DV HA D+ V GI A + G + ++QR LAAF +GE+ +TNC VLTEGFD P D ++M
Sbjct: 103 VIASVPTLARSGARLSRLQP--DEFSIVVVDEAHHAVAP-SYRRIFDHFGLF-----EPNVSRYLIGFTATPRRGDKQGLGEVFQEVCYARDMREMIADRYLCPITGWRVASDLSLDHVKVRHGDFIESQLAHAVNIPLRNSLLVKAYRDFAPGR-----RAIVFCVDVAHAKDVHRVFAEAGIRAATVWGALSRDQRRSTLAAFSAGEIDVVTNCNVLTEGFDEPRVDCVIM 322
BLAST of mRNA_F-distichus_contig10457.406.1 vs. uniprot
Match: A0A1Q7G082_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium 13_1_40CM_56_16 TaxID=1803458 RepID=A0A1Q7G082_9BACT) HSP 1 Score: 135 bits (340), Expect = 3.730e-34 Identity = 85/233 (36.48%), Postives = 119/233 (51.07%), Query Frame = 1
Query: 7 VVASVQTLGRRGSGTARLRKYASYGGIVIVDEAHHVKARGMYDDVLNHLGVGSACEGKTKDDRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGITNGYLVDVHAYAVVTATNIAAVPVRQEDFSSGALSIAVNNDLRNEAAARALIEYGAGEGKKTPRSIAFCADVRHAHDLASVLNHHGISALAIDGGMKKEQRSRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVM 705
V+ASV TL R G+ ARL + IV+VDEAHH A Y + +H G+ + R L GFTATPRR D L F+ D+ I YL + + + T ++ V VR DF L+ VN LRN +A ++ AG R+I FC DV HA D+ + GI A + G + +++R LA F +G++ +TNC +LTEGFD P D ++M
Sbjct: 107 VIASVPTLARNGARLARL--HPDEFSIVVVDEAHHAVAP-SYRRIFDHFGLF-----EPGVSRYLIGFTATPRRGDKQGLGEVFEEVCYARDMREMIACRYLCPITGWRIDTDLSLDNVKVRHGDFVESQLARVVNTPLRNTLLVKAYRDFAAGR-----RAIIFCVDVAHAQDVHRAFDEAGIRAAPVWGELSRDERRNVLAEFSAGKIDVVTNCNLLTEGFDEPRVDCVIM 326
BLAST of mRNA_F-distichus_contig10457.406.1 vs. uniprot
Match: A0A445N132_9DELT (DEAD/DEAH box helicase n=1 Tax=uncultured Desulfobacterium sp. TaxID=201089 RepID=A0A445N132_9DELT) HSP 1 Score: 136 bits (342), Expect = 1.680e-33 Identity = 93/237 (39.24%), Postives = 126/237 (53.16%), Query Frame = 1
Query: 7 VVASVQTLGRRGS----GTARLRKYASYGGIVIVDEAHHVKARGMYDDVLNHLGVGSACEGKTKDDRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGITNGYLVDVHAYAVVTATNIAAVPVRQEDFSSGALSIAVNNDLRNEAAARALIEYGAGEGKKTPRSIAFCADVRHAHDLASVLNHHGISALAIDGGMKKEQRSRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVM 705
VVASV TLGR+GS G R + +++VDEAHH A + VL +L V + +LL GFTATP+R DG+ L F + L I G+L V AY V T +++ V R DF + LS AVN + RN+ + + EGK+T + FC DV HA LA N G+SA A+ G M + +R + L FR G+ S L NC VLTEG+D P + I++
Sbjct: 103 VVASVPTLGRKGSRRLTGLDPDRFF-----LIVVDEAHHATAD-TFKRVLKYLDVFMP-----ETRKLLVGFTATPKRGDGVGLDAVFQEIVYSRSLPEMIKAGHLSPVAAYRVETDIDLSRVKTRMGDFVTSQLSRAVNIEERNDLIVKVFHTHL--EGKQT---LCFCVDVAHALSLAQAFNREGVSAAAVTGHMDRAEREKELEKFRVGKTSVLANCMVLTEGYDEPSVEGIIL 323
BLAST of mRNA_F-distichus_contig10457.406.1 vs. uniprot
Match: A0A1Q7S1S1_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium 13_1_40CM_2_56_11 TaxID=1803440 RepID=A0A1Q7S1S1_9BACT) HSP 1 Score: 135 bits (341), Expect = 1.990e-33 Identity = 85/233 (36.48%), Postives = 119/233 (51.07%), Query Frame = 1
Query: 7 VVASVQTLGRRGSGTARLRKYASYGGIVIVDEAHHVKARGMYDDVLNHLGVGSACEGKTKDDRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGITNGYLVDVHAYAVVTATNIAAVPVRQEDFSSGALSIAVNNDLRNEAAARALIEYGAGEGKKTPRSIAFCADVRHAHDLASVLNHHGISALAIDGGMKKEQRSRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVM 705
V+ASV TL R G+ ARL + IV+VDEAHH A Y + +H G+ + R L GFTATPRR D L F+ D+ I YL + + + T ++ V VR DF L+ VN LRN +A ++ AG R+I FC DV HA D+ + GI A + G + +++R LA F +G++ +TNC +LTEGFD P D ++M
Sbjct: 107 VIASVPTLARNGARLARLHR--DEFSIVVVDEAHHAVAP-SYRRIFDHFGLF-----EPGVSRYLIGFTATPRRGDKQGLGEVFEEVCYARDMREMIACRYLCPITGWRIDTDLSLDNVKVRHGDFVESQLARVVNTPLRNTLLVKAYRDFAAGR-----RAIIFCVDVAHAQDVHRAFDEAGIRAAPVWGELSRDERRNVLAQFSAGKIDVVTNCNLLTEGFDEPRVDCVIM 326
BLAST of mRNA_F-distichus_contig10457.406.1 vs. uniprot
Match: A0A2V8MTW3_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8MTW3_9BACT) HSP 1 Score: 134 bits (337), Expect = 8.140e-33 Identity = 89/236 (37.71%), Postives = 118/236 (50.00%), Query Frame = 1
Query: 7 VVASVQTLGRRGSGTARLRKYASYGGIVIVDEAHHVKARGMYDDVLNHLGV---GSACEGKTKDDRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGITNGYLVDVHAYAVVTATNIAAVPVRQEDFSSGALSIAVNNDLRNEAAARALIEYGAGEGKKTPRSIAFCADVRHAHDLASVLNHHGISALAIDGGMKKEQRSRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVM 705
VVASV TL R G+ A+L I++VDEAHH A Y + +H G+ G+ R L GFTATPRR D L F+ DL I GYL + + V T ++ V V+ DF L+ VN RN A E G R+I FC DV HA ++ + GI + A+ G + K++R LAAF SGE+ +TNC +LTEGFD P D ++M
Sbjct: 95 VVASVPTLARGGTRLAQLPP--DDFSIIVVDEAHHAVAP-SYRRIFDHFGLLDPGTV--------RYLVGFTATPRRGDNQGLGEVFEEVCYARDLREMIAEGYLSRIRGWRVDTDLSLDGVKVQHGDFVESQLARVVNTPARNNLLVTAYRELADGR-----RAIVFCVDVAHAQNVHRAFSQAGIRSAAVWGELPKDERRATLAAFSSGEIDVVTNCNLLTEGFDEPRVDCVMM 314
BLAST of mRNA_F-distichus_contig10457.406.1 vs. uniprot
Match: A0A6J4XIT3_9DELT (DNA helicase, phage associated Type III restriction enzme n=1 Tax=Olavius sp. associated proteobacterium Delta 1 TaxID=698986 RepID=A0A6J4XIT3_9DELT) HSP 1 Score: 132 bits (331), Expect = 5.890e-32 Identity = 92/234 (39.32%), Postives = 119/234 (50.85%), Query Frame = 1
Query: 7 VVASVQTLGRRGSGTARLRKY-ASYGGIVIVDEAHHVKARGMYDDVLNHLGVGSACEGKTKDDRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGITNGYLVDVHAYAVVTATNIAAVPVRQEDFSSGALSIAVNNDLRNEAAARALIEYGAGEGKKTPRSIAFCADVRHAHDLASVLNHHGISALAIDGGMKKEQRSRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVM 705
VVASV TLGRRGS RL++ + +++VDEAHH A Y VL + GV A K LL GFTATP+R DG L F + L I YL V AY V T +++ V R DF + LS AVN RN+ L+ + R++ FC DV H LA N I A A+ G M + R++AL F +G + L NC VLTEG+D P I++
Sbjct: 104 VVASVPTLGRRGS--KRLQRLDPNRFFLIVVDEAHHATAA-TYKRVLEYFGVFEADTAK-----LLVGFTATPKRGDGQGLDAVFQEIVFSRSLPEMIHAKYLAPVAAYRVETDIDLSRVKTRMGDFVTSHLSRAVNIAPRND-----LVVNVFRSKLEDRRTLCFCVDVAHTRSLAEAFNRMDIPAAAVSGDMDRAARAKALEDFHTGRIRVLANCMVLTEGYDEPSVSGIIL 324
BLAST of mRNA_F-distichus_contig10457.406.1 vs. uniprot
Match: A0A847DF94_9DELT (DEAD/DEAH box helicase n=1 Tax=Desulfatiglans sp. TaxID=1969697 RepID=A0A847DF94_9DELT) HSP 1 Score: 131 bits (330), Expect = 8.060e-32 Identity = 88/237 (37.13%), Postives = 121/237 (51.05%), Query Frame = 1
Query: 7 VVASVQTLGRRGSGTARLRKYASYGG----IVIVDEAHHVKARGMYDDVLNHLGVGSACEGKTKDDRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGITNGYLVDVHAYAVVTATNIAAVPVRQEDFSSGALSIAVNNDLRNEAAARALIEYGAGEGKKTPRSIAFCADVRHAHDLASVLNHHGISALAIDGGMKKEQRSRALAAFRSGEVSTLTNCGVLTEGFDAPFCDTIVM 705
++ASV TLGR A ++ A+ ++IVDEAHH A Y +L +LGV + +LL GFTATP+R DG+ L + + L I +GYL V Y V T ++ V R DF + LS AVN + RN + +Y +GKKT + FC DV HA +A GI+A AI G M ++R L F G + L NC VLTEG+D P + I++
Sbjct: 103 IIASVPTLGR-----AESKRLAALDPDRFFLIIVDEAHHSTAE-TYKRILEYLGVFHP-----ETQKLLVGFTATPKRGDGVGLNEVYQEIVYSKPLPDMIKDGYLSPVAGYRVETDVDLTRVKTRMGDFVTSQLSSAVNIEPRNRIITKVYNDYL--KGKKT---LCFCVDVAHALSVAGSFKGQGINAEAITGDMDSQRRGEILKCFSEGNIDVLANCMVLTEGYDEPSVEGIIL 323 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10457.406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10457.406.1 >prot_F-distichus_contig10457.406.1 ID=prot_F-distichus_contig10457.406.1|Name=mRNA_F-distichus_contig10457.406.1|organism=Fucus distichus monoicous|type=polypeptide|length=236bp MKVVASVQTLGRRGSGTARLRKYASYGGIVIVDEAHHVKARGMYDDVLNHback to top mRNA from alignment at F-distichus_contig10457:475..2454- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10457.406.1 ID=mRNA_F-distichus_contig10457.406.1|Name=mRNA_F-distichus_contig10457.406.1|organism=Fucus distichus monoicous|type=mRNA|length=1980bp|location=Sequence derived from alignment at F-distichus_contig10457:475..2454- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10457:475..2454- >mRNA_F-distichus_contig10457.406.1 ID=mRNA_F-distichus_contig10457.406.1|Name=mRNA_F-distichus_contig10457.406.1|organism=Fucus distichus monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at F-distichus_contig10457:475..2454- (Fucus distichus monoicous)back to top |