mRNA_F-distichus_contig10455.404.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10455.404.1
Unique NamemRNA_F-distichus_contig10455.404.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
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BLAST of mRNA_F-distichus_contig10455.404.1 vs. uniprot
Match: A0A6H5JLL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL1_9PHAE)

HSP 1 Score: 442 bits (1138), Expect = 2.960e-145
Identity = 213/314 (67.83%), Postives = 254/314 (80.89%), Query Frame = 1 
Query:    1 ELALVETPPNVRMVATSSMKLAWLLAGIVYPEDADDRPEEYVSDYHKAMKADLTEDQQPARNERYMVAKFIQKLLDKNPYYMVEFKPTLGWVFREYLEGYTHWAYGDLDVLFGDLTKGWLEPREMRDFDIITYSFGDQERAYLRGQLTVHKINPKVNQLWRGCSHLSNYVRRIEITYETRRYNLESAEGCYSMVVMKSKDIKVKYAVKVFTDMPGGGQEKQEEVVITGEAVVKRCPARLNRRGDVLEPEYGS-MQEDVGQEWPVEVTQES--CEYWISPGFQTCLDIERLSDQTPNVFLHDGKYYARGEKHIWR 933
            +LA V+TPPNVRM++TS  +LAW+LAG+VYP DAD+RP+ YVSD+H A+  DLT+ Q  ARN R   A+FIQKLL KNPYYMVEFKP LGWVFREY++ YTHWAYGDLDV FGDLTKGWLEP EMRD+DIITYSFGDQ+RAYLRGQLTVHK   KVN +WR C HLSNY RRIE T ET++YNLESAEGCYSM +M SKD+K KYAVKVFTDMPGG Q+ QEEVVITG+ +VKRCP +  RRGDV+EP++G  MQ D G+ +PVE  ++   CEYWISP FQTCL ++    +T NVFL +G+YY R   ++W+
Sbjct:  199 DLAQVKTPPNVRMMSTSPAELAWMLAGVVYPADADERPDVYVSDFHMALMGDLTDLQMHARNVRGTAARFIQKLLAKNPYYMVEFKPALGWVFREYIKDYTHWAYGDLDVFFGDLTKGWLEPSEMRDYDIITYSFGDQQRAYLRGQLTVHKSIHKVNHIWRDCPHLSNYYRRIERTMETKQYNLESAEGCYSMALMYSKDVKAKYAVKVFTDMPGGKQDDQEEVVITGDGLVKRCPQQQGRRGDVVEPDFGGKMQVDRGEYFPVEKEEQGYFCEYWISPNFQTCLKLKESLTKT-NVFLLEGRYYEREFVNLWQ 511
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BLAST of mRNA_F-distichus_contig10455.404.1 vs. uniprot
Match: D7FVE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE1_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 4.530e-129
Identity = 183/257 (71.21%), Postives = 209/257 (81.32%), Query Frame = 1 
Query:  154 DLTEDQQPARNERYMVAKFIQKLLDKNPYYMVEFKPTLGWVFREYLEGYTHWAYGDLDVLFGDLTKGWLEPREMRDFDIITYSFGDQERAYLRGQLTVHKINPKVNQLWRGCSHLSNYVRRIEITYETRRYNLESAEGCYSMVVMKSKDIKVKYAVKVFTDMPGGGQEKQEEVVITGEAVVKRCPARLNRRGDVLEPEYGS-MQEDVGQEWPVEVTQES--CEYWISPGFQTCLDIERLSDQTPNVFLHDGKYYARG 915
            DLT+ Q  ARN R   A+FIQKLL KNPYYMVEFKP LGWVFREYL+ YTHWAYGDLDV FGDLTKGWLEP EMRD+DIITYSFGDQ+RAYLRGQLTVHK   KVN +WRGC HLSNY RRIE T ET++YNLESAEGCYSM +M SKD+K KYAVKVFTDMPGG Q+ QEEVVITG+ +VKRCP +  RRGDV+EP++G  MQ D G+ +PVE  ++   CEYWISP FQTCL ++    +T NVFL +G+YY RG
Sbjct:    3 DLTDLQMHARNVRGTAARFIQKLLAKNPYYMVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMRDYDIITYSFGDQQRAYLRGQLTVHKSIHKVNHIWRGCPHLSNYYRRIERTMETKQYNLESAEGCYSMALMYSKDVKAKYAVKVFTDMPGGKQDDQEEVVITGDGLVKRCPQQQGRRGDVVEPDFGGKMQVDKGEYFPVETEEQGYFCEYWISPNFQTCLKLKESLTKT-NVFLLEGRYYERG 258
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BLAST of mRNA_F-distichus_contig10455.404.1 vs. uniprot
Match: D7G2Z3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z3_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 7.690e-62
Identity = 119/270 (44.07%), Postives = 158/270 (58.52%), Query Frame = 1 
Query:  187 ERYMVAKFIQKLLDKNPYYMVEFKPTLGWVFREYLEGYTHWAYGDLDVLFGDLTKGWLEPREMRDFDIITYSFGDQERAYLRGQLTVHKINPKVNQLWRGCSHLSNYVRRIEITYETRRYNLESAEGCYSMVVMKSKDIKVKYAVKVFTDMP-----GGGQEKQEEVVITGEAVVKRCP----------------------ARLNRRGDVLEPEYGSMQEDVGQEWPVEVTQESCEYWISPGFQTCL-DIERLSDQTPNVFLHDGKYYAR 912
            +R   A F+ +LL  +PY++VEFKP  GW+FREYL  Y+HWA+GDLDVLFGD+ +GWLEP E++DFDIIT+SFGDQ RAYLRGQLT+HK    VN++WR CSHL+NY  R+E         LESAEGCYS+       +++K+ VK  +D+         Q++  EV+I G  +V  CP                      A     G+  E    SMQ+ VG    VE  +  CE+WI P  QTC+ D+     QT  ++L  GKYY +
Sbjct:  395 KRKRAASFLHQLLITSPYFIVEFKPAFGWLFREYLTEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKADVNRVWRRCSHLTNYSERLEAFRVNHGLPLESAEGCYSLAAASDPSLRIKFTVKALSDVDQEDEEAVAQKRGREVIIDGHGLVTLCPDLEYYYNEPPGAGAGTNYGASNADGGGNGERKEGLSPSMQDAVGPMTSVEKAKGRCEHWIKPEHQTCVKDVG--GSQT--LYLIGGKYYKQ 660
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BLAST of mRNA_F-distichus_contig10455.404.1 vs. uniprot
Match: A0A448ZCW1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCW1_9STRA)

HSP 1 Score: 183 bits (464), Expect = 2.330e-48
Identity = 103/277 (37.18%), Postives = 150/277 (54.15%), Query Frame = 1 
Query:  157 LTEDQQPARNERYMVAKFIQKLLDKNPYYMVEFKPTLGWVFREYLEGYTHWAYGDLDVLFGDLTKGWLEPREMRDFDIITYSFGDQERAYLRGQLTVHKINP-KVNQLWRGCSHLSNYVRRI-EITYETRRYNLESAEGCYSMVVMKSKDIKVKYAVKVFTDMPGGGQEKQEEVVIT-----GEAVVKRC----PARL--------NRRGDVLEPEYGSMQEDVGQEWPVEVTQES----CEYWISPGFQTCLDIERLSDQTPNVFLHDGKYYARGE 918
            + ED+      +  +A  + KL+ K PY MVEFKP LG VF E+LEGY+HW Y DLD+LFGDL + W+ P E+ DFDI+TY FGDQ++ YLRGQ T H+ +P ++NQLWR C +LS+   R         + +LESAEGCYS  ++ + DIKVKYAVK FTD+          V +T      + V+ +     P  L         ++G +       +   VG+  P+  T +     C +W+   +Q+ L I+ +       ++H   Y  + E
Sbjct:  164 IPEDELELGGSKEKLAGILTKLIRKYPYVMVEFKPALGHVFEEFLEGYSHWGYSDLDILFGDLER-WITPDELNDFDIVTYGFGDQDKVYLRGQFTFHRNDPERINQLWRKCDYLSHMDTRFANFLSGKEKLSLESAEGCYSEAILNTDDIKVKYAVKAFTDVQTKDTAYTHGVYVTTGTKKDKTVIYKAGSDHPEELLTLPRNWFEKKGSLYANSNEMLYRPVGKRIPLSPTVQKEDVKCMHWVKSKYQSKLCIDNIDSNDTLYWIHGQLYKEKFE 439
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BLAST of mRNA_F-distichus_contig10455.404.1 vs. uniprot
Match: A0A1E7F5F1_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5F1_9STRA)

HSP 1 Score: 179 bits (453), Expect = 7.140e-47
Identity = 99/265 (37.36%), Postives = 144/265 (54.34%), Query Frame = 1 
Query:  199 VAKFIQKLLDKNPYYMVEFKPTLGWVFREYLEGYTHWAYGDLDVLFGDLTKGWLEPREMRDFDIITYSFGDQERAYLRGQLTVHKINP-KVNQLWRGCSHLSNYVRRIE-ITYETRRYNLESAEGCYSMVVMKSKDIKVKYAVKVFTDMP-------------------GGGQEKQEEVVITGEAVVKRCPARL-----NRRGDVLEPEYGSMQEDVGQEW---PVEVTQESCEYWISPGFQTCLDIERLSDQTPNVFLHDGKYY 906
            +A  + K +   PY MVEFKP LG +F+ YL+GYTHW Y DLD++FGDL + W+ P E+ +FDI+TY FGDQ R YLRGQ T+H+ +P K+NQLWR C +LS+   R E +  +    + ESAEGCYS  V++  DIK+KYAVK FTD                     G G++K   ++       +R  + +      R+G +       + + VG+      +E     C YW    +Q+ L I+ + D T  ++   G+ Y
Sbjct:  158 LAGILTKYIRNYPYVMVEFKPALGHIFQHYLDGYTHWGYSDLDIMFGDLER-WITPDELTEFDIVTYGFGDQHRVYLRGQFTIHRNDPEKINQLWRPCDYLSHMDTRFEQVLSKEETLHFESAEGCYSAAVLERDDIKIKYAVKAFTDAEQEKKKKEDKDTAYTHGVYVGTGKKKDRTIIYKAGMDNRRGLSTIPSDWFERKGSIYNDPNTLLYKSVGKREILPMIEKESVKCMYWAQKKYQSRLCIDGV-DSTDTIYWIHGQLY 420
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BLAST of mRNA_F-distichus_contig10455.404.1 vs. uniprot
Match: A0A6H5L1U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1U3_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.720e-46
Identity = 123/372 (33.06%), Postives = 173/372 (46.51%), Query Frame = 1 
Query:    1 ELALVETPPNVRMVATSSMKLAWLLAGIVYPEDA---------------------DDRPEEYVSDYHKAMKAD-----------------------LTEDQQPARNERYMVAKFIQKLLDKNPYYMVEFKPTLGWVFREYLEGYTHWAYGDLDVLFGDLTKGWLEPREMRDFDIITYSFGDQERAYLRGQLTVHKINPKVNQLWRGCSHLSNYVRRIEITYETRRYNLESAEGCYSMVVMKSKDIKVKYAVKVFTDMPGGGQEKQEEVVITGEAVVKRCP------------------ARLNRRGDVLEPEYG----SMQEDVGQEWPVEVTQESCEYWISPGFQTCL-DIERLSDQTPNVFLHDGKYYARG 915
            +L   ++PPN++    ++ ++AWLLAG+V PED                       D   E V + H  ++                         +TE       +R   A F+ +L   +PY++VEFKP  GW+FREYL  Y+HWA+GDLDVLFGD+ +GWLEP E++DFDIIT+      RAYLRGQLT+HK    VN++WR CSHL+NY  R+E   +  + + E+      + +M+ +                       EV+I G  +V  CP                     N  G   +   G    SMQ  VG    VE  +  CE+WI P  QTC+ D+     QT  +FL  GKYY +G
Sbjct:  292 KLVRKQSPPNIKFFPMTTRRMAWLLAGVVEPEDPLPVHGGDRGDGLDGGDGNGDKSDGDVESVPETHAEIEVQENDGNEGKDSGVETAASRIWEESITEALAKNAVKRKRAASFLHQLFITSPYFIVEFKPAFGWLFREYLVEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITF------RAYLRGQLTIHKNKVDVNRVWRRCSHLTNYSERLEALSDVDQEDGEA------VALMRGR-----------------------EVIIDGHGLVTLCPDLECFYNEPLGAGAGTNYGTSNADGGGNDESKGGLSPSMQVAVGPMTIVEKAKGRCEHWIKPEHQTCVKDVG--GSQT--LFLIGGKYYKQG 624
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BLAST of mRNA_F-distichus_contig10455.404.1 vs. uniprot
Match: B7FVG7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVG7_PHATC)

HSP 1 Score: 171 bits (433), Expect = 3.290e-44
Identity = 76/143 (53.15%), Postives = 106/143 (74.13%), Query Frame = 1 
Query:  211 IQKLLDKNPYYMVEFKPTLGWVFREYLEGYTHWAYGDLDVLFGDLTKGWLEPREMRDFDIITYSFGDQERAYLRGQLTVHKINPKVNQLWRGCSHLSNYVRRI-EITYETRRYNLESAEGCYSMVVMKSKDIKVKYAVKVFTD 636
            + K L++ PY +VEFKP LG++F+EYLE Y+HW Y DLD+LFGDL++ W+ P E+ +FD++TY FGDQ R Y RGQ T H+  P+VN LWR C +LS   +R  +I  E +++  ESAEGCYS+ +++  DI+VKYAVK +TD
Sbjct:  154 LAKHLEQFPYALVEFKPALGYIFQEYLESYSHWGYSDLDMLFGDLSR-WITPDELTEFDVVTYGFGDQHRLYARGQFTFHRNTPRVNTLWRKCEYLSRMDQRFAKILSEKKKFKFESAEGCYSVALLQHYDIRVKYAVKAWTD 295
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BLAST of mRNA_F-distichus_contig10455.404.1 vs. uniprot
Match: A0A7S2LG80_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LG80_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.930e-42
Identity = 74/140 (52.86%), Postives = 99/140 (70.71%), Query Frame = 1 
Query:  235 PYYMVEFKPTLGWVFREYLEGYTHWAYGDLDVLFGDLTKGWLEPREMRDFDIITYSFGDQERAYLRGQLTVHKINPKV-NQLWRGCSHLSNY-VRRIEITYETRRYNLESAEGCYSMVVMKSKDIKVKYAVKVFTDMPGG 648
            PY +VE+KP  G +F +YL  Y+HW Y D+DV+FGD+T+ W++  E  D+DI+TY FGDQ++ YLRGQ T HK +PKV NQ+WR C +LS   +R  E     R++  ESAEGCYS  V+  KDIKVK+AVK F+D+  G
Sbjct:   30 PYILVEYKPAFGHIFADYLTSYSHWGYSDIDVVFGDMTR-WIDTDEWNDYDIVTYGFGDQDKLYLRGQFTFHKNDPKVINQMWRHCKYLSEMDIRYSEKNASERKF--ESAEGCYSQAVIMRKDIKVKWAVKAFSDVGEG 166
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BLAST of mRNA_F-distichus_contig10455.404.1 vs. uniprot
Match: A0A1Z5JIW8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIW8_FISSO)

HSP 1 Score: 160 bits (404), Expect = 2.560e-40
Identity = 94/271 (34.69%), Postives = 143/271 (52.77%), Query Frame = 1 
Query:  187 ERYMVAKFIQKLLDKNPYYMVEFKPTLGWVFREYLEGYTHWAYGDLDVLFGDLTKGWLEPREMRDFDIITYSFGDQERAYLRGQLTVHKINPKVNQLWRGCSHLSNYVRRIEITYETR-RYNLESAEGCYSMVVMKSKDIKVKYAVKVFTDM--PGGG--------------QEKQEEVVITGEAVVKRCPARLNRRGDVLEPEYGSM-----QEDV--GQEWPVEVTQE-----SCEYWISPGFQTCLDIERLSDQTPNVFLHDGKYYAR 912
            ER  + + +  LLD  PY +VEFKP LG++F++ LEGY+HW Y DLD++FGDL+  W+   E+ ++DI+TYS+GDQ R YLRGQ T HK N KVN +WR C +L +   R +   +++  + +ESAEGCYS  V+   D++VKY    +TD     GG              + K  +V+   ++  +   ARL  R   L+P Y        Q D+  G    +++         C YW+   +Q  L +  L      ++  +G  Y +
Sbjct:  118 ERSSLEELMTTLLDLRPYALVEFKPALGYIFQDLLEGYSHWGYTDLDIVFGDLSH-WITEDELLNYDIVTYSYGDQRRLYLRGQFTFHKNNDKVNNIWRYCRYLRDLDERFDSIVKSKGHFRVESAEGCYSAAVLDRNDVRVKYVPHAWTDTHDEAGGTFRDILSSHGVYLARSKSRQVLYRAKSAGEN--ARLVAR---LDPSYWDKNGAYTQRDISLGSLEAIDIADAVHNDVKCMYWVPSEYQAKLCLSALIASDETLYWINGSLYKQ 382
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BLAST of mRNA_F-distichus_contig10455.404.1 vs. uniprot
Match: K0T0P4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T0P4_THAOC)

HSP 1 Score: 159 bits (403), Expect = 4.040e-40
Identity = 71/136 (52.21%), Postives = 98/136 (72.06%), Query Frame = 1 
Query:  235 PYYMVEFKPTLGWVFREYLEGYTHWAYGDLDVLFGDLTKGWLEPREMRDFDIITYSFGDQERAYLRGQLTVHKINPK-VNQLWRGCSHLSNYVRRIEITYETRRYNLESAEGCYSMVVMKSKDIKVKYAVKVFTDM 639
            PY +VE+KP  G +F +Y+E Y+HW Y DLDV+FGD+T+ W++  E   +DI+TY FGDQ+R YLRGQ T H+ +P  +NQ+WR C +LS    ++++ Y T+    ESAEGCYS  V+  KDIKVK+AVK FTD+
Sbjct:  301 PYILVEYKPAFGHIFADYIEDYSHWGYSDLDVVFGDVTR-WIDDDEWNGYDIVTYGFGDQDRLYLRGQFTFHRNDPMYINQIWRHCRYLS----KMDVRYATKHIKFESAEGCYSQAVISRKDIKVKWAVKAFTDV 431
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10455.404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLL1_9PHAE2.960e-14567.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVE1_ECTSI4.530e-12971.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2Z3_ECTSI7.690e-6244.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A448ZCW1_9STRA2.330e-4837.18Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7F5F1_9STRA7.140e-4737.36Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A6H5L1U3_9PHAE1.720e-4633.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B7FVG7_PHATC3.290e-4453.15Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2LG80_9STRA1.930e-4252.86Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A1Z5JIW8_FISSO2.560e-4034.69Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
K0T0P4_THAOC4.040e-4052.21Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10455contigF-distichus_contig10455:134..6896 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score380.9
Seed ortholog evalue5.5e-103
Seed eggNOG ortholog2880.D7FVE1
Hectar predicted targeting categoryother localisation
EggNOG OGs2BMGJ@1,2S1KX@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-09_004310.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size933
Cds size933
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10455.404.1prot_F-distichus_contig10455.404.1Fucus distichus monoicouspolypeptideF-distichus_contig10455 134..6896 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928965.0010748-CDS-F-distichus_contig10455:133..3041622928965.0010748-CDS-F-distichus_contig10455:133..304Fucus distichus monoicousCDSF-distichus_contig10455 134..304 -
1690885084.7498062-CDS-F-distichus_contig10455:133..3041690885084.7498062-CDS-F-distichus_contig10455:133..304Fucus distichus monoicousCDSF-distichus_contig10455 134..304 -
1622928965.0160804-CDS-F-distichus_contig10455:825..9631622928965.0160804-CDS-F-distichus_contig10455:825..963Fucus distichus monoicousCDSF-distichus_contig10455 826..963 -
1690885084.7614894-CDS-F-distichus_contig10455:825..9631690885084.7614894-CDS-F-distichus_contig10455:825..963Fucus distichus monoicousCDSF-distichus_contig10455 826..963 -
1622928965.032348-CDS-F-distichus_contig10455:2961..30631622928965.032348-CDS-F-distichus_contig10455:2961..3063Fucus distichus monoicousCDSF-distichus_contig10455 2962..3063 -
1690885084.771118-CDS-F-distichus_contig10455:2961..30631690885084.771118-CDS-F-distichus_contig10455:2961..3063Fucus distichus monoicousCDSF-distichus_contig10455 2962..3063 -
1622928965.063519-CDS-F-distichus_contig10455:4245..43661622928965.063519-CDS-F-distichus_contig10455:4245..4366Fucus distichus monoicousCDSF-distichus_contig10455 4246..4366 -
1690885084.7815247-CDS-F-distichus_contig10455:4245..43661690885084.7815247-CDS-F-distichus_contig10455:4245..4366Fucus distichus monoicousCDSF-distichus_contig10455 4246..4366 -
1622928965.0767753-CDS-F-distichus_contig10455:5811..59811622928965.0767753-CDS-F-distichus_contig10455:5811..5981Fucus distichus monoicousCDSF-distichus_contig10455 5812..5981 -
1690885084.7935357-CDS-F-distichus_contig10455:5811..59811690885084.7935357-CDS-F-distichus_contig10455:5811..5981Fucus distichus monoicousCDSF-distichus_contig10455 5812..5981 -
1622928965.0933805-CDS-F-distichus_contig10455:6665..68961622928965.0933805-CDS-F-distichus_contig10455:6665..6896Fucus distichus monoicousCDSF-distichus_contig10455 6666..6896 -
1690885084.8032463-CDS-F-distichus_contig10455:6665..68961690885084.8032463-CDS-F-distichus_contig10455:6665..6896Fucus distichus monoicousCDSF-distichus_contig10455 6666..6896 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10455.404.1

>prot_F-distichus_contig10455.404.1 ID=prot_F-distichus_contig10455.404.1|Name=mRNA_F-distichus_contig10455.404.1|organism=Fucus distichus monoicous|type=polypeptide|length=311bp
ELALVETPPNVRMVATSSMKLAWLLAGIVYPEDADDRPEEYVSDYHKAMK
ADLTEDQQPARNERYMVAKFIQKLLDKNPYYMVEFKPTLGWVFREYLEGY
THWAYGDLDVLFGDLTKGWLEPREMRDFDIITYSFGDQERAYLRGQLTVH
KINPKVNQLWRGCSHLSNYVRRIEITYETRRYNLESAEGCYSMVVMKSKD
IKVKYAVKVFTDMPGGGQEKQEEVVITGEAVVKRCPARLNRRGDVLEPEY
GSMQEDVGQEWPVEVTQESCEYWISPGFQTCLDIERLSDQTPNVFLHDGK
YYARGEKHIWR
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mRNA from alignment at F-distichus_contig10455:134..6896-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10455.404.1 ID=mRNA_F-distichus_contig10455.404.1|Name=mRNA_F-distichus_contig10455.404.1|organism=Fucus distichus monoicous|type=mRNA|length=6763bp|location=Sequence derived from alignment at F-distichus_contig10455:134..6896- (Fucus distichus monoicous)
GAGCTGGCCCTGGTGGAAACGCCGCCAAACGTGCGTATGGTCGCGACCTC
TTCTATGAAGCTGGCGTGGCTCCTGGCGGGCATCGTGTATCCGGAGGACG
CCGACGATAGACCGGAGGAATACGTGTCGGACTACCACAAGGCGATGAAG
GCAGACTTGACGGAGGACCAGCAGCCGGCGAGAAACGAACGCTACATGGT
GGCGAAATTCATCCAAAAGCTTCTTGACAAGGTTAAAGTTGACTAAAGTT
GATTTCGAGCGGCAGGGGGCAATTGTTGATACACACTATATATAAATATA
CACTGTACAGCAATAGACTAATTACCTGGTAGAAGTGACTTGTAACACAC
TTTCAAGATATTAATGGTACAATATTATTGATCCCCAGGTAGAAGTCGTC
GCCCGAGTGGTCTAGTAGGTAACCTGCACACCTGCTAGTGCGGAAGTCGT
GAGTTCGATTCTTACCAAAGTAAGATTTGTGTTCTTTTATTTCGTAACGG
AAAGCGTGGGAACGTGAGTAAGTAAGATCCAACCGTTGGTTGACGAGTTG
TAAGAGTACTGAACTTGCATCGCGATAAAAAATCGTAAGGCGTGAACCGA
GGAGAGATGGGAAGATCCTTTGTGACCACAGTCAGGATGGTAGTTATGAG
GTCCATCGGCTATAAGTGTGATTAAAAAAATAAAAAATAAAATGTAGAAG
TGACTATTAATATATTACGGCCTCTAATAGGACAAGTGCAGTAATAGTAA
TAGTAATAGTAAAGCGTGACATACTATTGGAGCTAATAGGATACGGGGGC
TAAGGCCAGATTGAACGGTTACGCGCAATTGAACAAATGGCATGATGTGG
CATGACAGGCACGAGACGCGAGACAGATCGACAGACGCATTTTCCTGTTG
GCTGTTACTTTGCAGAATCCTTACTACATGGTGGAGTTCAAGCCCACTCT
GGGCTGGGTGTTCCGAGAATACCTCGAGGGTTACACTCATTGGGCGTACG
GCGATCTGGACGTGTTATTCGGCGACCTGACCAAGGGCTGGCTCGAGCCT
AGGGAGATGCGTGATTTCGACATCATCACCTACAGGTCGTGTACCGTGTC
GTGACTTAATTGACTACTGTAGGTGTACTAGTACCATGTAGGTGTCTCTA
CCACTATGCTACGCTATCCTATGCTATGATGCGCTATGCCATGCGATGCT
TGTATCTAAAAGGTGCAGCCAAGAGAGGTTTGACCGGGTGGAAAGCAATG
TTAGCGTTTTTGGTATCACGGGTGACTGGGAAGCCACGGTATTGGAGGCA
GGTTGTGGAGTGTGGAGTGATAGTGATACCGTGAACGAGACCCACCAAGA
TAGGACGGAGTCATGCTGTGTGTCATGCTGTGTCAGGCTGTGGCTGTGCC
GTCTGGAGTAAAGAGGAGGCAAACGATGCTAACGTTGTCACCGCGCCCTG
GACTGTAGGACATAAATCCGTGAAATCCTCCAAACGACGCCGCATGGTCT
AGTAGGCCAGCGGACTCAACCCTGTTCGGGCGCCGGGCGAACCGAGACCG
TAGTGTCTAGGCTTATGAATTTGTAATCTGACGCATCCCTGACCATCTGT
TTGGTTGAATGTGTTTTAATGTGTTTCGATGTGTCAGTGTTTGTTTGTTT
CAATGAGTTCAACATTTTTTTCTTACGATATACCTGGTACTCTATATGTA
GACACTCATGATAGTCGGATAATTTTACAGACATGCAATATTACATTATT
ATAGTAAAAAACACGAAAACAACTGAATATATCGACTTTTGAGTCTCTCT
ATGAGTACTCTACAGAATACAGCAGTGCCGGACTGTAGATTTCGTTATGT
ATTTTCTATCAGTAGTATATTTCATAGTATACCTGGTACCTCATTCTTTC
GGAGTGTGTTTTGAAGCGATTCCATGTTACGGAGGCTTTTGTCAGTTGCC
TTCACGAGCTGGTCTAACAGTACAATTTATAAAAATAAAAATATGAACGC
ATCTAGACCTTCTGAACATACTATACTATACTGTACCCCAATCAGGGGGG
GGTGGGGATGTCAAAATGTTTAGGTGGGATCAAAGGCTGCAAAGACAAAA
CCTCTTCATGGCGTTCAATCGGGTTCCTCGATGGTAGTAACGTTGGGTCA
ACAGTATAATGTCGAGGATTTATCATAGCAGTCTTCAATGTTTGAGAGAG
TGTATCTGCGTGCGTTCAATATAAAATAATGTTTTTCCCTAAGGTTAAGC
ACTACTAAAAGTCTTTTAGAGTACGCATTTAAGGTTCCGTTGACGTGGGC
CCAATCTGACCCTAATTATTGCCCTCACCACAATCAAGGAGGCTAATAAT
AATGATATACAGGTAGTATTAAGTATTATTAGCATCATAGCAGGAAGAAA
AAGCACCCAGGAAAGATTTTAAGTATGTTGCCAATTTTTACATGAGAAGT
CTCTCATCTGATCTCATGTAATCTCTTGCCCTTGTTCGTTGCTTGCTCCG
TGTTTGTTTGCTGTTCTCTGATTGGTGCAGCTTCGGGGACCAAGAGCGAG
CGTACTTGAGGGGACAGCTCACGGTGCATAAGATCAACCCGAAGGTCAAT
CAGCTCTGGAGAGGATGTTCCCATCTTTCCAACTACGTCAGGCGTATCGA
GGTGTGTCATGTGTGTGTGTGTGTGTCATGTGTGACATAGTGGAGAAGGG
CTCGATATCAATATTCCACTACAGTATCCCAACACAGTATCCCTTTTTCC
AATGTGTTGGGATGTGTGAGCTTTCGATTTCACATACTATCGTCATCCTG
TTTTTATTGCGTGATATTGCGTGAGTTACTGACGAGAGAATGTAAAATCG
CTATTCGTCCCTTGCGGTGATGTTCTCGAGTGTTGCACCGTAGTAAGTGT
TGTATTATTAATATTAATACATATAGACTAATAGGTGGTGTGGTGTTTTA
CCTGCTTGGTGTTATGCTCCAAACGTCCCACCTTTTTGTTATTGTTGCTG
TTGTCTTTTTCTGTCTTCTTCCTTAGCTCTGATCGTTTTATGTCCATTTT
GAAATACCGTTTATGACTTAGGAAAACCCGCTTTGTCAGTTACGTCCAGG
GGTTACGCCTGAAGCCCGTTGCCTTGCCTTGCCCTTTGTAGTCGTAACTG
ATTCTCTAGATGATTATGTATACTATTAATAGAGGTATACTCTCCCCCGC
TTAATAGGTCATCATGGGTCATGACCGGCGGCAGATCCGATACTTTAAGA
GCCAATCGTATGCAATACGGGTGGTAGGTCGTTCGGGCATTGGATTGGCC
GGTCGCTGTTTACTCATCGAAGGACGGAAAATAAATTTCGACAGTTAAAT
TATTGATATTAATACTATACAATATCTCTATCAGAGTAATCCAAAATACC
TTCAGAGGAGGTAGGGGCTACCAGTATGTCACGACAGCGGATGAGAGTCC
CCTGCTACGAAGCGCACTTGCTATTTCATTATAAGATAACTTGTAATACT
GTAACTAACACCTCTTTGTAACAGTATACCCGGGTACTGGAGTACCGCAG
TTAATATTGTTTACTGACAGGGGTTCTTGTAGAGTATTGTTCAGCTTTTG
TTTTGACGTTCGTTCCCTCGTTCCCTCGTACTCTCTTGTCTTGTTTGTAT
ACAGTGTACAGTACAATACAGTAATATCCAGCCAATACCATGTACTGAAT
CGCTTTGTCTGTTACAGTACCTTATTGCTGTATACTCTTCTCCTTGTATT
CGATTGTACCCTTTTGTACCCTTGTGTATCTTATTGTACCCTTTGGTGCC
TTGCTGTATCTTACTCTATCTTATTGTATCCAGATCACGTACGAGACCAG
ACGGTACAATCTCGAGAGCGCCGAAGGCTGCTATAGCATGGTAGTGATGA
AGTCCAAGGACATCAAGGTCAAGTACGCCGTCAAGGTGCGAGGACTTCAA
GAACCGATGTGTTGGTCTTTCTGGCAGAATGCCCCCCCCCCCCTCCCCCC
CAAGTACATCCTCTGCACACACCTTTCTCTGCTTCCTCTGCACACACATT
GCTGACGAACGCGGTAAATAATGTATTTTTTTTATTGTTTCAACATGTCT
CAAAAGAGGTGCACTACAAGTAGGCATCGTATGTTCGTATTATAATTTTG
CACTATTACGACCCTAATATTATTATTACTATAATAGTCCTGTACAGGAC
AGTACCTGGAATATTGTGCCCGTTTGGTGCTTGTTTGGGTGTCGTGGTGT
ACCTTTTTCTTCTCTCTTGAGACAAGGAATGCACTATCTCGACTCTTCAA
GAGATAAAATCGCGTCGCCTTAAAACAGAAAAAAACATCGAGAATACGTC
ATGCTGAGGTATGGTGTATGAGGTTTGATGTTATAAGGTGTACTACTATC
CGCATCGGTTAGATGCTTACAGCACAGAAGCAAGCACGGCGGTAGGTGTG
CGTGTTTTGCTTGTGCCAAACGAGGAGAGGCAAACGGAGTTTACAGTTGG
AGGGAGCCGACAGAAAAGTCGGATGAGACACACACAAAGCAAGCATACGA
AGATGTAGGAAGATCCACAGCCAGTACCAGTACTAAGGGAGAAGTTTAAC
TAACGCCGAACGTACCTTATGTCGAACATGCGCCTTGAGCGGTATTAAAT
ACTGAGTATTATAGTAGATCCGTCTGTACATTATTACAGTCGTTGTTGTT
GTTGATTCACACATTCAGCGTATTGTCGTTGCAACTGAAGAAACTAAGGT
GACACAACAAGTCAGCCATAGATGTATCAAATGCCAATCCCGCTTGTGGT
CGCAAAGAGTTACCAAGGTCAGCGGGTCACATCATGGGGACAACCCGCTA
CAGTAATCAAACCAACAGGGATCCAAGTCGCGAAAAAACGTTATGCGACT
CTACAAGCAACGGCACCGACCAATGTCAAAACGGTTCATCAAACCTCCTT
ACTCCATATCGAGATAAACCTCGATCGCCTCGGATTGCTGCCGCCTACCC
ACGACCGGCGTTCTCAGCAGCAAAGCGGACAAACTACGCTCCATCACTTC
TGATCAACAAGCCCAAGTTTCTCAAGGCCATACATCGTACAGAAATAAGG
AAAATTGAAATACCGAGGTCCATGATGGTGAAGCCGGTGCGCGAGCCAGC
ATCCAGCCGTCCAAAGCCCTGTGCATCCTTGAAAAAGCTTCACGAATCTT
GCCCGTTCGCCACTCCTTGCGGCCCTCGTAGGAAGAAAAATGACCGTGAC
CAGACATCAGCTTTCCCTCAGAAACCTCCCGGTTCGCGCCTTTGGTTCTC
GCGCACAGGGGTTCAGCCCTCCCCTGGCTCGTCGACAATCGAGCTGCCGT
CCGCCTTCGCTGAATATGGTGCGTACCCACCCGATAGAGCGCTACCAGGC
TCTCCGCGATAGTGCTCCCTGCCTCTCGCGTGCCGCCACACCTCCCGAAG
GGCACCAAATCGGAGCTCGGAAGAGGTGCGCACGTGGGAACACCATACTC
AGCTAACCATACCGCCGCCGCGTCTCAACCGACAAGCTGAATCGCGAAGG
CAGCCAGTTGGCTGTACCTCTTGAGGATGAGCCCGGCCCTTCACCCGCCG
GAAAGACCCTCCCACACTCATACCTCGAAATCAGATTTCTCCTGCCGCCC
AAGTCTCCCCCGTCTTTGACATCGCGTCTATAACGTGTGTGTATTTATTA
AATTGCACATGGCCGCGCAACCCGGCCCTTTCATTCTAATATTGTCATAA
TATGCCACTCGCATTGATCCTCTCAAGAGGTATTAAGGGATCAATGATAA
AGCTCGGATCAGACGCGACAAAAAGGAAACGAACCTCTCTACAGATATTT
TTTATGCCCCGAGCGCCTTGCGCTTCCCTTTCTGCTTCCTTGCTTGCTTG
CTTCCTTCCTTATGTGCGTATGTGTCATAACAGGTGTTCACAGACATGCC
TGGGGGGGGGCAGGAAAAACAGGAGGAGGTTGTCATCACAGGAGAGGCAG
TGGTTAAGCGTTGTCCCGCGCGGCTTAACCGGAGGGGAGACGTACTAGAG
CCGGAGTACGGAAGCATGCAGGTTGGAGTGTGCTGCGTGCGTTACATTAG
TTGGTTGAGGATAGTGAGGGCTCCGTAAGTGTTACCAGTACATATTTTTA
GTTGTATATTAGATATATTAGTTGCAATGTAAGTTATTTGGCCGTAGTCT
TAGTTCTTAGTCTTGGTCTGCAGGTAATCGTTAGATTAAACGTTAGATTA
GGCGTTGTCGCGTAACTGGTCAGTAACAGTATATTGTATATTGAATATGG
TATATTAGTGCCGGTGAACAATACCTCGTGCAGTAAGTAAAAGCATGTTT
CGTCGAGCGTTGTTCTTGTATTCGAGGCGCCCTTTAGTTATATACCTCAA
GATACCCATGATATAGCCATGTTAGCCGTGTTCCGGAAAAGGATGGATGA
TGGATGCGGTCATCTTTTGTTCTACTGGGGTTACAACTGTACTGTCCTGC
CCGCTGCGCGCGTTTTTCTTGCTTGTTGGGGTACCCCTGGTATGGCATGA
TATGGTGGATACCATGGTATGGTATGGTGGTTACCACGGCAGGAAGACGT
AGGCCAGGAGTGGCCGGTGGAGGTAACTCAAGAGTCGTGCGAGTATTGGA
TCAGCCCCGGCTTCCAGACATGCCTCGATATCGAGCGCCTGAGCGATCAG
ACGCCTAACGTGTTCCTTCACGACGGGAAGTATTACGCACGGGGTGAGAA
ACATATTTGGAGG
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Coding sequence (CDS) from alignment at F-distichus_contig10455:134..6896-

>mRNA_F-distichus_contig10455.404.1 ID=mRNA_F-distichus_contig10455.404.1|Name=mRNA_F-distichus_contig10455.404.1|organism=Fucus distichus monoicous|type=CDS|length=1866bp|location=Sequence derived from alignment at F-distichus_contig10455:134..6896- (Fucus distichus monoicous)
GAGCTGGCCCTGGTGGAAACGCCGCCAAACGTGCGTATGGTCGCGACCTC
TTCTATGAAGCTGGCGTGGCTCCTGGCGGGCATCGTGTATCCGGAGGACG
CCGACGATAGACCGGAGGAATACGTGTCGGACTACCACAAGGCGATGAAG
GCAGACTTGACGGAGGACCAGCAGCCGGCGAGAAACGAACGCTACATGGT
GGCGAAATTCATCCAAAAGCTTCTTGACAAGGAGCTGGCCCTGGTGGAAA
CGCCGCCAAACGTGCGTATGGTCGCGACCTCTTCTATGAAGCTGGCGTGG
CTCCTGGCGGGCATCGTGTATCCGGAGGACGCCGACGATAGACCGGAGGA
ATACGTGTCGGACTACCACAAGGCGATGAAGGCAGACTTGACGGAGGACC
AGCAGCCGGCGAGAAACGAACGCTACATGGTGGCGAAATTCATCCAAAAG
CTTCTTGACAAGAATCCTTACTACATGGTGGAGTTCAAGCCCACTCTGGG
CTGGGTGTTCCGAGAATACCTCGAGGGTTACACTCATTGGGCGTACGGCG
ATCTGGACGTGTTATTCGGCGACCTGACCAAGGGCTGGCTCGAGCCTAGG
GAGATGCGTGATTTCGACATCATCACCTACAGAATCCTTACTACATGGTG
GAGTTCAAGCCCACTCTGGGCTGGGTGTTCCGAGAATACCTCGAGGGTTA
CACTCATTGGGCGTACGGCGATCTGGACGTGTTATTCGGCGACCTGACCA
AGGGCTGGCTCGAGCCTAGGGAGATGCGTGATTTCGACATCATCACCTAC
AGCTTCGGGGACCAAGAGCGAGCGTACTTGAGGGGACAGCTCACGGTGCA
TAAGATCAACCCGAAGGTCAATCAGCTCTGGAGAGGATGTTCCCATCTTT
CCAACTACGTCAGGCGTATCGAGCTTCGGGGACCAAGAGCGAGCGTACTT
GAGGGGACAGCTCACGGTGCATAAGATCAACCCGAAGGTCAATCAGCTCT
GGAGAGGATGTTCCCATCTTTCCAACTACGTCAGGCGTATCGAGATCACG
TACGAGACCAGACGGTACAATCTCGAGAGCGCCGAAGGCTGCTATAGCAT
GGTAGTGATGAAGTCCAAGGACATCAAGGTCAAGTACGCCGTCAAGATCA
CGTACGAGACCAGACGGTACAATCTCGAGAGCGCCGAAGGCTGCTATAGC
ATGGTAGTGATGAAGTCCAAGGACATCAAGGTCAAGTACGCCGTCAAGGT
GTTCACAGACATGCCTGGGGGGGGGCAGGAAAAACAGGAGGAGGTTGTCA
TCACAGGAGAGGCAGTGGTTAAGCGTTGTCCCGCGCGGCTTAACCGGAGG
GGAGACGTACTAGAGCCGGAGTACGGAAGCATGCAGGTGTTCACAGACAT
GCCTGGGGGGGGGCAGGAAAAACAGGAGGAGGTTGTCATCACAGGAGAGG
CAGTGGTTAAGCGTTGTCCCGCGCGGCTTAACCGGAGGGGAGACGTACTA
GAGCCGGAGTACGGAAGCATGCAGGAAGACGTAGGCCAGGAGTGGCCGGT
GGAGGTAACTCAAGAGTCGTGCGAGTATTGGATCAGCCCCGGCTTCCAGA
CATGCCTCGATATCGAGCGCCTGAGCGATCAGACGCCTAACGTGTTCCTT
CACGACGGGAAGTATTACGCACGGGGTGAGAAACATATTTGGAGGGAAGA
CGTAGGCCAGGAGTGGCCGGTGGAGGTAACTCAAGAGTCGTGCGAGTATT
GGATCAGCCCCGGCTTCCAGACATGCCTCGATATCGAGCGCCTGAGCGAT
CAGACGCCTAACGTGTTCCTTCACGACGGGAAGTATTACGCACGGGGTGA
GAAACATATTTGGAGG
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