mRNA_F-distichus_contig10438.394.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10438.394.1
Unique NamemRNA_F-distichus_contig10438.394.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 496 bits (1278), Expect = 3.240e-170
Identity = 245/398 (61.56%), Postives = 298/398 (74.87%), Query Frame = 1
Query:  103 EDGGCGTMTDLYKFRVEKDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAP-EASSDGRPSDNNIYDNIFSNTKTGVKIKEGDNNNITGEM 1293
            E  GC T+TDLY FR+E DG + KGPI+ LDD+ + + +P  ++ KWLLT++L I  G++FYCRG+SIGGDCDELRIQST  TDFHEVR HGGS+YFE+T+VTSWDTPNK+PQ  Y  GRSF+NCVSE  + E C GQ QN+ GECRMDII+SE+GYLG+FDSE+YGLTWKVRG+C D SNP+VFDTTNVYG++I SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT                               +GG  AAGIFLHRSSD   V+DN+VHDMQ AGMA++ES +ADI++N FS+VK+GIR+S+G   N+V+ N+F+D S  G++TYQGSD P +  SDGRPSDN   +N   N   GVKIKEGD+  IT  +
Sbjct:   83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNV 467          
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 504 bits (1299), Expect = 1.610e-168
Identity = 246/427 (57.61%), Postives = 308/427 (72.13%), Query Frame = 1
Query:    1 IMTISDECTGTNS--SIRWSSSTGLNGRMCEYLEYLEDGGCGTMTDLYKFRVEKDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGDNN 1275
            +M IS  C       S R+++S+G+ GR+     Y E  GC TMTDLY FR  ++  + KGP+Y+LDD+   +  P+ +T  WLL ++L+I  G +FYC+GTS GGDC++LRIQST S DFHEVRGHGGSLYFE+T+VTSWDTPNK PQE YE+GRSF+NCVSE  + + CEG  +N+ GECRMDII+SE+ YLG+FDSE+YG+TWKVRG+C D SNPEVF+ TNVYGD+  SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA                             +GG+ AAGIFLHRSSD   V+DN + +MQ AG+A++ESFDA I+ N  +  KYGIR+S+G G+N VY N F D S+YG++TY+GSD P+ S DGRPS N +  N+  +   GVKIKEGD+N
Sbjct:  414 LMEISSSCGDDEDRPSFRYAASSGVAGRL-----YAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDN 834          
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 452 bits (1162), Expect = 1.710e-153
Identity = 222/403 (55.09%), Postives = 282/403 (69.98%), Query Frame = 1
Query:  103 EDGGCGTMTDLYKFRVEKDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVR---------GYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGDNNNIT 1284
            E  GC T+TDLY FR  ++  + KGP+Y+LD +   + +PT+VT KWLL ++L++  G+IFYC G+  GGDCDELRIQST   D++EVRGHGGS+YF +T+VTSWDTPNK PQE YE GRSF+NCVSE  + ETC+G  +ND GECRMDII+SEMGY+G+FDSE+YGLTWKVR         G+C D SNP+VF+TTNVYGDI NSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY            +A                             +GG  A GIFLHRSSD+ EVY N + +M  AG+A++ESF+ADIHDN    V++GIR+S+G G N+VY+N F+DCS++G++TY GSD P+ S+ GRP+ N   +N  +N+  GVK K  DN  +T
Sbjct:   18 ESEGCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVT 407          
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 445 bits (1144), Expect = 4.950e-151
Identity = 219/400 (54.75%), Postives = 274/400 (68.50%), Query Frame = 1
Query:  103 EDGGCGTMTDLYKFRVEKDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEY-ESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGDNNNITGEMKS 1299
            + GGC T++DLY ++   +    KGP+++LD ND +  + T  TGKWLLT+DLF+  G+  YCRG  +GG+C ELRI+ST+ +DF E+RGHGG+LYFE+T+VTSWD   + PQE Y+DGRSFI CVSE    ++TC     N+ GECRMDIIDSEMGYLG+  SEAYG+TWKVRG+C+D SNP+VFD  NVYGD+  SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA                             +GG+ AAGIFLHRS D  EVY N + +M  AG+A++E+   DIHDN     ++GIR+ +G  +N V++NVF +    G+FTY GSD P     GRP DN  Y+N    T+TGVKIKE DN +IT    S
Sbjct:    7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFS 402          
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 427 bits (1098), Expect = 2.020e-145
Identity = 209/348 (60.06%), Postives = 253/348 (72.70%), Query Frame = 1
Query:  124 MTDLYKFR-VEKDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWK--------VRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSE 1140
            MTDLY FR  EKDG + KGP+Y+LDD+   +  P+ +T  WLL ++L+I  G +FYC+GTS GGDC++LRIQST S DFHEVRGHGGSLYFE+T+VTSWDTPNK PQE YE GRSF+NCVSE  + + CEG  +N+ GECRMDII+SE+ YLG+FDSE+YG+TWK        VRG+C D SNPEVFD TNVYGD+I SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT                               +GG+ A GIFLHRSSD   V+DN + +MQ AG+A++E+FDA I+ NT +  KYGIR+S+G G+N VY N F D S+
Sbjct:    1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVR------------DGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335          
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 396 bits (1017), Expect = 7.940e-127
Identity = 207/395 (52.41%), Postives = 260/395 (65.82%), Query Frame = 1
Query:   97 YLEDGGCGTMTDLYKFRVEKDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESD--ETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIF-SNT-KTGVKIKEGD 1269
            Y+  GGC T+TD+Y     + G    GP+++LD ND+++    + TG WLL  D+ +  GS+    G   GGD   LRIQST S D++E+RGHGGSL F +T VTSWDT  K    +Y+  RSFI CVSE  +D  +TC+G   N  GECRMDII SEMG +G+  +E+YG++WKVRGYC++  NPEVF+ T V GDII+SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA                             +GG  A GIFLHRSSD CEV+ N V+DM+ AGMAIMES  A IHDNTF+NVKYGIR+SVG   N V NN F +C +YG++TYQG+D PEAS D    D  + DN F +NT + GVKI++ +
Sbjct:  401 YIRGGGCATLTDIY---TAQGGHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDW---DGLLVDNTFHANTVEGGVKIQKAE 787          
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 5.100e-126
Identity = 210/434 (48.39%), Postives = 279/434 (64.29%), Query Frame = 1
Query:   10 ISDECTGTNSSIRWSSSTGLNGRMCEYLEYLEDGGCGTMTDLYKFRVEKDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDET--CEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGS------NPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEA-SSDGRPSDNNIYDNIFSNT---KTGVKIKEGDNN 1275
            +  E T    S   S  +    R  + + Y E GGCGT+T +Y+ + E DG     P+Y+LD+N+D++      TG WLL  +L ++ GS     GT+  GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N   +E   DGRSFINCV++++      C+G+   ++GECRMDII S MG +GWFD+E+YGLTWKVRG C          N E+F+  NVYGDI+NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+                             +GG  A GIFLHRSSD  EV+DN+V++MQ AGMA+MES+DA+I+DN+F+N +YGIR+S+G G N + NN+F   ++YG++TY GSD P+  +S+GRPSDN ++D     T     GV IKEGD+N
Sbjct:  163 VGTESTTPTPSATTSCDSAATVRFTDDIAYFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGGTP--TGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDN-VFDGNTIETDGDNIGVHIKEGDSN 586          
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 376 bits (965), Expect = 4.260e-125
Identity = 208/372 (55.91%), Postives = 247/372 (66.40%), Query Frame = 1
Query:  187 ILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGDN-----NNITG 1287
            +LDD+ + + SPT+VT KWLL S+L++  G+IFYC G+  GGDCDELRIQST   D++EVRGHGGS+YF +T+VTSWDTPNK PQE YE GRSF+NCVSE  + ETC+G+ +ND GECRMDII+SEMGY+G+FD+E+YGLTWKVRG+C D SNP+VF+TTNVYGDI NS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX                +GG +A GIFLHRSSD+ EVY                                                        G       DAP+ S+ GRP+ N   +N  +NT  GVKIK  DN     N+ TG
Sbjct:    1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTG 316          
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 360 bits (924), Expect = 5.970e-117
Identity = 198/417 (47.48%), Postives = 255/417 (61.15%), Query Frame = 1
Query:   40 SIRWSSSTGLNGRMCEYLEYLEDG----GCGTMTDLYKFRVEKDGWTPKGPIYILD-DNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEY--ESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGD 1269
            SIR++ +T    R+  YLE  ++G    GC T+  +++ R  K      GP+Y +D D+ ++    T+ TG WLLT +L++  G      G+  GGD DELR+ STN T F  +R HGGSL F +T V SWDT   SP ED  DGRS+I+ +SE   + DETCEG  +N  GE RMDI  SE+GYLG++DSE+YGLTWKVRG+C D SNPEVFD  NVYG++ +SDIHHM +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI                               G   +AGIFLHRSSD   V  N VHD   AG+A++ESF+AD+ +NTF N KYG+R SVG   N   NN   + +EY  ++Y G+D P+  S GR  +N    N FS  +  +KIKE D
Sbjct:   45 SIRYAGTTA---RL--YLESADNGTTRGGCVTLGQIWESRAGK------GPLYAVDPDSGNVS---TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEAD 446          
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 6.860e-114
Identity = 191/400 (47.75%), Postives = 243/400 (60.75%), Query Frame = 1
Query:   88 YLEYLED---GGCGTMTDLYKFRVEKDGWTPKGPIYILD-DNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEY--ESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGD 1269
            YLE  +    GGC T+  +++ R  K       P+Y +D D+ D+  + T   G WLLT +L++  G      GT  GGD DELR+ ST+ T +  +R HGGSL F  T V SWDT   SP ED  DGRS+I+ VSE   + DETCEG  +N  GE RMDI +SE+GYLG+ DSE+YGLTWKVRG+C D SNPE+FD  NVYG++ +SDIHH+ +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI                               G   +AGIFLHRSSD   V  N VHD   AG+A++ESF+AD+ +NTF N KYG+R+SVG   N    N+  + S+Y  +TY GSD P+  S GR  +N    N FS  +  +KIKE D
Sbjct:   61 YLESADGETRGGCATLGQIWESRAGK------APLYAVDPDSGDVSETET---GTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEAD 450          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM4_ECTSI3.240e-17061.56Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D8LC73_ECTSI1.610e-16857.61Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6H5JGU8_9PHAE1.710e-15355.09MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FRR8_ECTSI4.950e-15154.75Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE2.020e-14560.06MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JNF5_9PHAE7.940e-12752.41MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7G8D9_ECTSI5.100e-12648.39Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FIU4_ECTSI4.260e-12555.91Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI5.970e-11747.48Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI6.860e-11447.75Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10438contigF-distichus_contig10438:11..2260 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score510.0
Seed ortholog evalue1.1e-141
Seed eggNOG ortholog2880.D8LC73
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons5
Model size1305
Cds size1302
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10438.394.1prot_F-distichus_contig10438.394.1Fucus distichus monoicouspolypeptideF-distichus_contig10438 11..2257 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928963.5602167-CDS-F-distichus_contig10438:10..1741622928963.5602167-CDS-F-distichus_contig10438:10..174Fucus distichus monoicousCDSF-distichus_contig10438 11..174 -
1690885084.1723955-CDS-F-distichus_contig10438:10..1741690885084.1723955-CDS-F-distichus_contig10438:10..174Fucus distichus monoicousCDSF-distichus_contig10438 11..174 -
1622928963.5746238-CDS-F-distichus_contig10438:400..5651622928963.5746238-CDS-F-distichus_contig10438:400..565Fucus distichus monoicousCDSF-distichus_contig10438 401..565 -
1690885084.1876028-CDS-F-distichus_contig10438:400..5651690885084.1876028-CDS-F-distichus_contig10438:400..565Fucus distichus monoicousCDSF-distichus_contig10438 401..565 -
1622928963.7007527-CDS-F-distichus_contig10438:825..10631622928963.7007527-CDS-F-distichus_contig10438:825..1063Fucus distichus monoicousCDSF-distichus_contig10438 826..1063 -
1690885084.198537-CDS-F-distichus_contig10438:825..10631690885084.198537-CDS-F-distichus_contig10438:825..1063Fucus distichus monoicousCDSF-distichus_contig10438 826..1063 -
1622928963.7179542-CDS-F-distichus_contig10438:1219..18601622928963.7179542-CDS-F-distichus_contig10438:1219..1860Fucus distichus monoicousCDSF-distichus_contig10438 1220..1860 -
1690885084.2074292-CDS-F-distichus_contig10438:1219..18601690885084.2074292-CDS-F-distichus_contig10438:1219..1860Fucus distichus monoicousCDSF-distichus_contig10438 1220..1860 -
1622928963.7556975-CDS-F-distichus_contig10438:2163..22571622928963.7556975-CDS-F-distichus_contig10438:2163..2257Fucus distichus monoicousCDSF-distichus_contig10438 2164..2257 -
1690885084.2154863-CDS-F-distichus_contig10438:2163..22571690885084.2154863-CDS-F-distichus_contig10438:2163..2257Fucus distichus monoicousCDSF-distichus_contig10438 2164..2257 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928963.7741876-UTR-F-distichus_contig10438:2257..22601622928963.7741876-UTR-F-distichus_contig10438:2257..2260Fucus distichus monoicousUTRF-distichus_contig10438 2258..2260 -
1690885084.2238994-UTR-F-distichus_contig10438:2257..22601690885084.2238994-UTR-F-distichus_contig10438:2257..2260Fucus distichus monoicousUTRF-distichus_contig10438 2258..2260 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10438.394.1

>prot_F-distichus_contig10438.394.1 ID=prot_F-distichus_contig10438.394.1|Name=mRNA_F-distichus_contig10438.394.1|organism=Fucus distichus monoicous|type=polypeptide|length=434bp
MTISDECTGTNSSIRWSSSTGLNGRMCEYLEYLEDGGCGTMTDLYKFRVE
KDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTS
IGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYE
DGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYG
LTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWT
NNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIASKRCNNLKIYDN
EVYNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNT
FSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPS
DNNIYDNIFSNTKTGVKIKEGDNNNITGEMKSD*
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mRNA from alignment at F-distichus_contig10438:11..2260-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10438.394.1 ID=mRNA_F-distichus_contig10438.394.1|Name=mRNA_F-distichus_contig10438.394.1|organism=Fucus distichus monoicous|type=mRNA|length=2250bp|location=Sequence derived from alignment at F-distichus_contig10438:11..2260- (Fucus distichus monoicous)
ATCATGACTATCTCAGATGAGTGTACTGGCACCAATTCTTCCATCCGCTG GTCGTCTAGCACCGGGCTCAACGGTCGCATGTGTGAGTACCTCGAATGTC TGCGCGCATTCAACCAATTCAACCGAAAAAATAATGTTTTGCTCCTTTCT GTCCCCAATATATTGTCGGTCAAATATTCGTTCGAAACGTTTTACTATTT CGTGATTTGTTTCGTCTTTCCATTTTTTTCGTGCACATATTTATGTACGC GCGAAGTATGTAGAGTGGAAACGTGCGTCTGCTAGAATGATTGCTTCGAA ATCTCGAATGTATATCTTTGTGTGTAATCGATATATCGTGTGTCGGCATT TTTCAACATTTCATTTCTTGGCACCTTTACGCTGTTCAACGCTAATCCAG ACCTTGAGGACGGTGGCTGCGGCACCATGACCGACCTCTACAAATTTCGC GTGGAGAAAGACGGTTGGACTCCCAAAGGTCCTATTTACATCCTCGACGA CAACGACGACATCATGTACAGCCCTACTAACGTGACAGGCAAGTGGCTCC TCACCTCCGACCTCTTCATCCTCCGAGGGTCAATTTTCTACTGTCGCGGC ACCAGCATAGGCGGTGACTGCGACGAACTGCGAATCCAGTCTACCAACTC CACCGACTTTCACGAGGTGCGCGGTCACGGTGGAAGCCTGTACTTCGAGA ACACCCTTGTCACCTCCTGGGACACCCCGAACAAGAGCCCGCAAGAGGAC TACGAGGACGGCCGCTCGTTCATCAACTGCGTGTCGGAGTATGAATCAGA CGAGACGTGTGAGGGCCAACCTCAGAATGACTACGGGGAGTGCCGCATGG ATATCATCGACTCCGAGATGGGTTATTTGGGATGGTTTGACTCGGAGGCC TACGGTTTGACCTGGAAAGTTCGCGGGTATTGTGCCGACGGGAGCAACCC GGAGGTGTTCGACACAACGAACGTATATGGTGACATCATTAACTCCGACA TTCACCACATGTACTACGGAATGTACTCCTACGGCCACCAGGTAACGTGC GGGTACACTTAGGTTCCAATCGCTGTAGTCGCGTTGGGTGCGTTCAATAT TTCAGTCCCCCTGTATACTGTGGGTTTGGCTTTAATTCCATGACCACATT ATTTGTGCTTGCATCAATCATGGCGACATAATATGCCTCTGATATAGGGC GGCGTGTGGACGAACAACAAGATGCACGACAACCACCAGTACGGTTTTGA CCCCCACGACGACTCGGACTACCTCACCATCGCCAACAACGAGGTTTACG ACAACGTGAACCATGGTATCATCGCGTCGAAGCGTTGCAACAACCTCAAA ATCTACGACAACGAGGTCTACAACGGCGGCTCGCAGGCTGCTGGAATATT CCTCCACCGCAGCTCCGACAGTTGTGAGGTTTACGGTGAGTCTAGTCGCA GCCTTTGCCCGCTTCACTTGAAACTATCAAAACTGAGGCGTAGACTATGA GTGTATATCGAGTCCGGTCAAGTATAATCAGCCGACCTCCCCGCCCACAA GCTTTTGAGACGCATGTTGTTAAAAGGTGAGAGAGCTAGATTTCTCTCTT GTTGAATAATCTATGTTGTACTGGCTGTTGATAATACTGTCACTCGCACT CGTCTATTGCTGGATTGCCTCAACCACATTGAATCCGCATTCTAGATAAC ATCGTACACGACATGCAAGCCGCCGGTATGGCCATCATGGAGTCTTTCGA CGCCGACATTCACGACAACACCTTCTCGAACGTCAAGTACGGCATCCGTA TCAGCGTGGGTGGAGGGAGCAACAACGTGTACAACAACGTATTCGATGAT TGCTCCGAGTGTGAGTATCTGTACCGATGTATAGGTCATCAGAGGGTAAC TTCCCTATGAAATTACGCCCGGAGTACCATAACTACCGTAGAATGCAAAC AGGGGTGTCATTCGGCAAGAGTATGGATATCGACTTGTCAGTCGGTTCTC ATCCTGATTCTCTCCCCTCCCATATCTGCGATTGTTCTCCGGGTCCCCCG TTAATGACATTTGCCTCCGTACGGCACGCTTCGTAGACGGCGTCTTCACC TACCAAGGTTCCGACGCCCCCGAGGCGTCTTCTGACGGCCGGCCTAGCGA TAACAACATCTACGACAACATATTCTCTAACACCAAGACCGGCGTAAAGA TCAAAGAAGGGGACAACAACAACATCACCGGTGAGATGAAATCGGACTGA
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Coding sequence (CDS) from alignment at F-distichus_contig10438:11..2260-

>mRNA_F-distichus_contig10438.394.1 ID=mRNA_F-distichus_contig10438.394.1|Name=mRNA_F-distichus_contig10438.394.1|organism=Fucus distichus monoicous|type=CDS|length=2604bp|location=Sequence derived from alignment at F-distichus_contig10438:11..2260- (Fucus distichus monoicous)
ATGACTATCTCAGATGAGTGTACTGGCACCAATTCTTCCATCCGCTGGTC
GTCTAGCACCGGGCTCAACGGTCGCATGTGTGAGTACCTCGAATATGACT
ATCTCAGATGAGTGTACTGGCACCAATTCTTCCATCCGCTGGTCGTCTAG
CACCGGGCTCAACGGTCGCATGTGTGAGTACCTCGAATACCTTGAGGACG
GTGGCTGCGGCACCATGACCGACCTCTACAAATTTCGCGTGGAGAAAGAC
GGTTGGACTCCCAAAGGTCCTATTTACATCCTCGACGACAACGACGACAT
CATGTACAGCCCTACTAACGTGACAGGCAAGTGGCTCCTCACCTCCGACC
TCTTCATCCTCCGAGGGTCAATTTTCTACTGTCGCGGCACCAGCATAGGC
GGTGACTGCGACGAACTGCGAATCCAGTCTACCAACTCCACCGACTTTCA
CGAGGTGCGCGGTCACGGTGGAAGCCTGTACTTCGAGAACACCCTTGTCA
CCTCCTGGGACACCCCGAACAAGAGCCCGCAAGAGGACTACGAGGACGGC
CGCTCGTTCATCAACTGCGTGTCGGAGTATGAATCAGACGAGACGTGTGA
GGGCCAACCTCAGAATGACTACGGGGAGTGCCGCATGGATATCATCGACT
CCGAGATGGGTTATTTGGGATGGTTTGACTCGGAGGCCTACGGTTTGACC
TGGAAAGTTCGCGGGTATTGTGCCGACGGGAGCAACCCGGAGGTGTTCGA
CACAACGAACGTATATGGTGACATCATTAACTCCGACATTCACCACATGT
ACTACGGAATGTACTCCTACGGCCACCAGACCTTGAGGACGGTGGCTGCG
GCACCATGACCGACCTCTACAAATTTCGCGTGGAGAAAGACGGTTGGACT
CCCAAAGGTCCTATTTACATCCTCGACGACAACGACGACATCATGTACAG
CCCTACTAACGTGACAGGCAAGTGGCTCCTCACCTCCGACCTCTTCATCC
TCCGAGGGTCAATTTTCTACTGTCGCGGCACCAGCATAGGCGGTGACTGC
GACGAACTGCGAATCCAGTCTACCAACTCCACCGACTTTCACGAGGTGCG
CGGTCACGGTGGAAGCCTGTACTTCGAGAACACCCTTGTCACCTCCTGGG
ACACCCCGAACAAGAGCCCGCAAGAGGACTACGAGGACGGCCGCTCGTTC
ATCAACTGCGTGTCGGAGTATGAATCAGACGAGACGTGTGAGGGCCAACC
TCAGAATGACTACGGGGAGTGCCGCATGGATATCATCGACTCCGAGATGG
GTTATTTGGGATGGTTTGACTCGGAGGCCTACGGTTTGACCTGGAAAGTT
CGCGGGTATTGTGCCGACGGGAGCAACCCGGAGGTGTTCGACACAACGAA
CGTATATGGTGACATCATTAACTCCGACATTCACCACATGTACTACGGAA
TGTACTCCTACGGCCACCAGGGCGGCGTGTGGACGAACAACAAGATGCAC
GACAACCACCAGTACGGTTTTGACCCCCACGACGACTCGGACTACCTCAC
CATCGCCAACAACGAGGTTTACGACAACGTGAACCATGGTATCATCGCGT
CGAAGCGTTGCAACAACCTCAAAATCTACGACAACGAGGTCTACAACGGC
GGCTCGCAGGCTGCTGGAATATTCCTCCACCGCAGCTCCGACAGTTGTGA
GGTTTACGGGCGGCGTGTGGACGAACAACAAGATGCACGACAACCACCAG
TACGGTTTTGACCCCCACGACGACTCGGACTACCTCACCATCGCCAACAA
CGAGGTTTACGACAACGTGAACCATGGTATCATCGCGTCGAAGCGTTGCA
ACAACCTCAAAATCTACGACAACGAGGTCTACAACGGCGGCTCGCAGGCT
GCTGGAATATTCCTCCACCGCAGCTCCGACAGTTGTGAGGTTTACGATAA
CATCGTACACGACATGCAAGCCGCCGGTATGGCCATCATGGAGTCTTTCG
ACGCCGACATTCACGACAACACCTTCTCGAACGTCAAGTACGGCATCCGT
ATCAGCGTGGGTGGAGGGAGCAACAACGTGTACAACAACGTATTCGATGA
TTGCTCCGAGTATAACATCGTACACGACATGCAAGCCGCCGGTATGGCCA
TCATGGAGTCTTTCGACGCCGACATTCACGACAACACCTTCTCGAACGTC
AAGTACGGCATCCGTATCAGCGTGGGTGGAGGGAGCAACAACGTGTACAA
CAACGTATTCGATGATTGCTCCGAGTACGGCGTCTTCACCTACCAAGGTT
CCGACGCCCCCGAGGCGTCTTCTGACGGCCGGCCTAGCGATAACAACATC
TACGACAACATATTCTCTAACACCAAGACCGGCGTAAAGATCAAAGAAGG
GGACAACAACAACATCACCGGTGAGATGAAATCGGACTGAACGGCGTCTT
CACCTACCAAGGTTCCGACGCCCCCGAGGCGTCTTCTGACGGCCGGCCTA
GCGATAACAACATCTACGACAACATATTCTCTAACACCAAGACCGGCGTA
AAGATCAAAGAAGGGGACAACAACAACATCACCGGTGAGATGAAATCGGA
CTGA
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