mRNA_F-distichus_contig10438.394.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 496 bits (1278), Expect = 3.240e-170 Identity = 245/398 (61.56%), Postives = 298/398 (74.87%), Query Frame = 1
Query: 103 EDGGCGTMTDLYKFRVEKDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAP-EASSDGRPSDNNIYDNIFSNTKTGVKIKEGDNNNITGEM 1293
E GC T+TDLY FR+E DG + KGPI+ LDD+ + + +P ++ KWLLT++L I G++FYCRG+SIGGDCDELRIQST TDFHEVR HGGS+YFE+T+VTSWDTPNK+PQ Y GRSF+NCVSE + E C GQ QN+ GECRMDII+SE+GYLG+FDSE+YGLTWKVRG+C D SNP+VFDTTNVYG++I SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT +GG AAGIFLHRSSD V+DN+VHDMQ AGMA++ES +ADI++N FS+VK+GIR+S+G N+V+ N+F+D S G++TYQGSD P + SDGRPSDN +N N GVKIKEGD+ IT +
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNV 467
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 504 bits (1299), Expect = 1.610e-168 Identity = 246/427 (57.61%), Postives = 308/427 (72.13%), Query Frame = 1
Query: 1 IMTISDECTGTNS--SIRWSSSTGLNGRMCEYLEYLEDGGCGTMTDLYKFRVEKDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGDNN 1275
+M IS C S R+++S+G+ GR+ Y E GC TMTDLY FR ++ + KGP+Y+LDD+ + P+ +T WLL ++L+I G +FYC+GTS GGDC++LRIQST S DFHEVRGHGGSLYFE+T+VTSWDTPNK PQE YE+GRSF+NCVSE + + CEG +N+ GECRMDII+SE+ YLG+FDSE+YG+TWKVRG+C D SNPEVF+ TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA +GG+ AAGIFLHRSSD V+DN + +MQ AG+A++ESFDA I+ N + KYGIR+S+G G+N VY N F D S+YG++TY+GSD P+ S DGRPS N + N+ + GVKIKEGD+N
Sbjct: 414 LMEISSSCGDDEDRPSFRYAASSGVAGRL-----YAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDN 834
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 452 bits (1162), Expect = 1.710e-153 Identity = 222/403 (55.09%), Postives = 282/403 (69.98%), Query Frame = 1
Query: 103 EDGGCGTMTDLYKFRVEKDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVR---------GYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGDNNNIT 1284
E GC T+TDLY FR ++ + KGP+Y+LD + + +PT+VT KWLL ++L++ G+IFYC G+ GGDCDELRIQST D++EVRGHGGS+YF +T+VTSWDTPNK PQE YE GRSF+NCVSE + ETC+G +ND GECRMDII+SEMGY+G+FDSE+YGLTWKVR G+C D SNP+VF+TTNVYGDI NSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY +A +GG A GIFLHRSSD+ EVY N + +M AG+A++ESF+ADIHDN V++GIR+S+G G N+VY+N F+DCS++G++TY GSD P+ S+ GRP+ N +N +N+ GVK K DN +T
Sbjct: 18 ESEGCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVT 407
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 445 bits (1144), Expect = 4.950e-151 Identity = 219/400 (54.75%), Postives = 274/400 (68.50%), Query Frame = 1
Query: 103 EDGGCGTMTDLYKFRVEKDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEY-ESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGDNNNITGEMKS 1299
+ GGC T++DLY ++ + KGP+++LD ND + + T TGKWLLT+DLF+ G+ YCRG +GG+C ELRI+ST+ +DF E+RGHGG+LYFE+T+VTSWD + PQE Y+DGRSFI CVSE ++TC N+ GECRMDIIDSEMGYLG+ SEAYG+TWKVRG+C+D SNP+VFD NVYGD+ SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA +GG+ AAGIFLHRS D EVY N + +M AG+A++E+ DIHDN ++GIR+ +G +N V++NVF + G+FTY GSD P GRP DN Y+N T+TGVKIKE DN +IT S
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFS 402
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 427 bits (1098), Expect = 2.020e-145 Identity = 209/348 (60.06%), Postives = 253/348 (72.70%), Query Frame = 1
Query: 124 MTDLYKFR-VEKDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWK--------VRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSE 1140
MTDLY FR EKDG + KGP+Y+LDD+ + P+ +T WLL ++L+I G +FYC+GTS GGDC++LRIQST S DFHEVRGHGGSLYFE+T+VTSWDTPNK PQE YE GRSF+NCVSE + + CEG +N+ GECRMDII+SE+ YLG+FDSE+YG+TWK VRG+C D SNPEVFD TNVYGD+I SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT +GG+ A GIFLHRSSD V+DN + +MQ AG+A++E+FDA I+ NT + KYGIR+S+G G+N VY N F D S+
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVR------------DGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 396 bits (1017), Expect = 7.940e-127 Identity = 207/395 (52.41%), Postives = 260/395 (65.82%), Query Frame = 1
Query: 97 YLEDGGCGTMTDLYKFRVEKDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESD--ETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIF-SNT-KTGVKIKEGD 1269
Y+ GGC T+TD+Y + G GP+++LD ND+++ + TG WLL D+ + GS+ G GGD LRIQST S D++E+RGHGGSL F +T VTSWDT K +Y+ RSFI CVSE +D +TC+G N GECRMDII SEMG +G+ +E+YG++WKVRGYC++ NPEVF+ T V GDII+SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA +GG A GIFLHRSSD CEV+ N V+DM+ AGMAIMES A IHDNTF+NVKYGIR+SVG N V NN F +C +YG++TYQG+D PEAS D D + DN F +NT + GVKI++ +
Sbjct: 401 YIRGGGCATLTDIY---TAQGGHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDW---DGLLVDNTFHANTVEGGVKIQKAE 787
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 387 bits (995), Expect = 5.100e-126 Identity = 210/434 (48.39%), Postives = 279/434 (64.29%), Query Frame = 1
Query: 10 ISDECTGTNSSIRWSSSTGLNGRMCEYLEYLEDGGCGTMTDLYKFRVEKDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDET--CEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGS------NPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEA-SSDGRPSDNNIYDNIFSNT---KTGVKIKEGDNN 1275
+ E T S S + R + + Y E GGCGT+T +Y+ + E DG P+Y+LD+N+D++ TG WLL +L ++ GS GT+ GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N +E DGRSFINCV++++ C+G+ ++GECRMDII S MG +GWFD+E+YGLTWKVRG C N E+F+ NVYGDI+NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+ +GG A GIFLHRSSD EV+DN+V++MQ AGMA+MES+DA+I+DN+F+N +YGIR+S+G G N + NN+F ++YG++TY GSD P+ +S+GRPSDN ++D T GV IKEGD+N
Sbjct: 163 VGTESTTPTPSATTSCDSAATVRFTDDIAYFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGGTP--TGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDN-VFDGNTIETDGDNIGVHIKEGDSN 586
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 376 bits (965), Expect = 4.260e-125 Identity = 208/372 (55.91%), Postives = 247/372 (66.40%), Query Frame = 1
Query: 187 ILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGDN-----NNITG 1287
+LDD+ + + SPT+VT KWLL S+L++ G+IFYC G+ GGDCDELRIQST D++EVRGHGGS+YF +T+VTSWDTPNK PQE YE GRSF+NCVSE + ETC+G+ +ND GECRMDII+SEMGY+G+FD+E+YGLTWKVRG+C D SNP+VF+TTNVYGDI NS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX +GG +A GIFLHRSSD+ EVY G DAP+ S+ GRP+ N +N +NT GVKIK DN N+ TG
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTG 316
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 360 bits (924), Expect = 5.970e-117 Identity = 198/417 (47.48%), Postives = 255/417 (61.15%), Query Frame = 1
Query: 40 SIRWSSSTGLNGRMCEYLEYLEDG----GCGTMTDLYKFRVEKDGWTPKGPIYILD-DNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEY--ESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGD 1269
SIR++ +T R+ YLE ++G GC T+ +++ R K GP+Y +D D+ ++ T+ TG WLLT +L++ G G+ GGD DELR+ STN T F +R HGGSL F +T V SWDT SP ED DGRS+I+ +SE + DETCEG +N GE RMDI SE+GYLG++DSE+YGLTWKVRG+C D SNPEVFD NVYG++ +SDIHHM +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI G +AGIFLHRSSD V N VHD AG+A++ESF+AD+ +NTF N KYG+R SVG N NN + +EY ++Y G+D P+ S GR +N N FS + +KIKE D
Sbjct: 45 SIRYAGTTA---RL--YLESADNGTTRGGCVTLGQIWESRAGK------GPLYAVDPDSGNVS---TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEAD 446
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 352 bits (904), Expect = 6.860e-114 Identity = 191/400 (47.75%), Postives = 243/400 (60.75%), Query Frame = 1
Query: 88 YLEYLED---GGCGTMTDLYKFRVEKDGWTPKGPIYILD-DNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTNSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEY--ESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSEAYGLTWKVRGYCADGSNPEVFDTTNVYGDIINSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGD 1269
YLE + GGC T+ +++ R K P+Y +D D+ D+ + T G WLLT +L++ G GT GGD DELR+ ST+ T + +R HGGSL F T V SWDT SP ED DGRS+I+ VSE + DETCEG +N GE RMDI +SE+GYLG+ DSE+YGLTWKVRG+C D SNPE+FD NVYG++ +SDIHH+ +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI G +AGIFLHRSSD V N VHD AG+A++ESF+AD+ +NTF N KYG+R+SVG N N+ + S+Y +TY GSD P+ S GR +N N FS + +KIKE D
Sbjct: 61 YLESADGETRGGCATLGQIWESRAGK------APLYAVDPDSGDVSETET---GTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEAD 450 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10438.394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10438.394.1 >prot_F-distichus_contig10438.394.1 ID=prot_F-distichus_contig10438.394.1|Name=mRNA_F-distichus_contig10438.394.1|organism=Fucus distichus monoicous|type=polypeptide|length=434bp MTISDECTGTNSSIRWSSSTGLNGRMCEYLEYLEDGGCGTMTDLYKFRVEback to top mRNA from alignment at F-distichus_contig10438:11..2260- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10438.394.1 ID=mRNA_F-distichus_contig10438.394.1|Name=mRNA_F-distichus_contig10438.394.1|organism=Fucus distichus monoicous|type=mRNA|length=2250bp|location=Sequence derived from alignment at F-distichus_contig10438:11..2260- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10438:11..2260- >mRNA_F-distichus_contig10438.394.1 ID=mRNA_F-distichus_contig10438.394.1|Name=mRNA_F-distichus_contig10438.394.1|organism=Fucus distichus monoicous|type=CDS|length=2604bp|location=Sequence derived from alignment at F-distichus_contig10438:11..2260- (Fucus distichus monoicous)back to top |