mRNA_F-distichus_contig10429.383.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10429.383.1 vs. uniprot
Match: A0A6H5JIE6_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIE6_9PHAE) HSP 1 Score: 174 bits (442), Expect = 1.490e-50 Identity = 99/117 (84.62%), Postives = 108/117 (92.31%), Query Frame = 1
Query: 82 MGLGQRKSKGSKGGHKTKNKQYXXXXXXXXRRKDIDQIQDELKAEEEKGVEEEKFELDDDLPGQGQFYCTPCARHFTDEKTRAVHVKSKLHKRRLKDVAQEQYTQAEAERGAGMTKE 432
MGLGQRKSKG KGGHKTKNK XXXXXXXXRRKD+DQIQDEL EEEKG EE FE+DDDLPGQGQFYCTPCARHFTD++T++ H++SKLHKRR+KDVAQEQYTQAEAERGAGMTKE
Sbjct: 1 MGLGQRKSKGGKGGHKTKNKXXXXXXXXXXRRKDVDQIQDELMVEEEKG-EEMVFEVDDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKE 116
BLAST of mRNA_F-distichus_contig10429.383.1 vs. uniprot
Match: A0A836CC06_9STRA (C2H2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC06_9STRA) HSP 1 Score: 146 bits (369), Expect = 4.700e-40 Identity = 86/148 (58.11%), Postives = 100/148 (67.57%), Query Frame = 1
Query: 82 MGLGQRKSKGSKGGHKTKNKQYXXXXXXXXRRKDIDQIQDELKAEEEKGVEEEKFELDDDLPGQGQFYCTPCARHFTDEKTRAVHVKSKLHKRRLKDVAQEQYTQAEAERGAGMTKEKYPPAHPALRQPAAAEESSSSRAVGDADEED 525
MG+GQ+KSKG+ G KTKNKQY R DIDQ+QD L+ E G + KF DDDLPG GQFYC PCARHFTD+ T H KSKLHKRRLKDVAQ++YTQ EA+ GAG +KE Y PAHP L A E + + A ADE+D
Sbjct: 1 MGIGQKKSKGTSKGSKTKNKQYKRALDTKRRPMDIDQVQDILEKVAETG-KPLKFAYDDDLPGGGQFYCAPCARHFTDQGTLDTHTKSKLHKRRLKDVAQKKYTQKEADAGAGKSKEVYAPAHPELVAARAMEAETIAPAAAAADEDD 147
BLAST of mRNA_F-distichus_contig10429.383.1 vs. uniprot
Match: A0A024UJ99_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJ99_9STRA) HSP 1 Score: 125 bits (313), Expect = 4.880e-32 Identity = 70/113 (61.95%), Postives = 79/113 (69.91%), Query Frame = 1
Query: 115 KGGHKTKNKQYXXXXXXXXRRKDIDQIQDELKAEEEKGVEEEKFELDDDLPGQGQFYCTPCARHFTDEKTRAVHVKSKLHKRRLKDVAQEQYTQAEAERGAGMTKEKYPPAHP 453
KG H K K Y R +DIDQIQD+LK EEE GV+ FELD+DLPG GQ+YCTPC RHF R VH+ SK+HKRR+KDVAQEQYTQ EAER AG + E Y PAHP
Sbjct: 9 KGAH-CKKKGYKRAHATKSRSRDIDQIQDDLKKEEETGVKM-TFELDEDLPGLGQYYCTPCGRHFITANARDVHIASKVHKRRMKDVAQEQYTQKEAERAAGKSIETYTPAHP 119
BLAST of mRNA_F-distichus_contig10429.383.1 vs. uniprot
Match: A0A8K1FHU3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHU3_PYTOL) HSP 1 Score: 124 bits (311), Expect = 1.060e-31 Identity = 70/114 (61.40%), Postives = 81/114 (71.05%), Query Frame = 1
Query: 103 SKGSKGGHKTKNKQYXXXXXXXXRRKDIDQIQDELKAEEEKGVEEEKFELDDDLPGQGQFYCTPCARHFTDEKTRAVHVKSKLHKRRLKDVAQEQYTQAEAERGAGMTKEKYPP 444
S+ KG H K K Y R +DIDQIQD+LK E+ G + FE+D+DLPG GQ+YCTPC RHF D KTR VH+K KLHKRR+KDVAQEQYTQAEAE GAG + EKY P
Sbjct: 5 SRPKKGAHAKKTK-YKRSHATKCRGRDIDQIQDDLKLEKLSG-KAMSFEVDEDLPGLGQYYCTPCGRHFIDAKTRDVHIKGKLHKRRMKDVAQEQYTQAEAEAGAGRSVEKYVP 116
BLAST of mRNA_F-distichus_contig10429.383.1 vs. uniprot
Match: A0A024G9F2_9STRA (C2H2-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G9F2_9STRA) HSP 1 Score: 122 bits (307), Expect = 4.130e-31 Identity = 68/118 (57.63%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 100 KSKGSKGGHKTKNKQYXXXXXXXXRRKDIDQIQDELKAEEEKGVEEEKFELDDDLPGQGQFYCTPCARHFTDEKTRAVHVKSKLHKRRLKDVAQEQYTQAEAERGAGMTKEKYPPAHP 453
K KG K H TK R +D+DQIQD+LK E ++ + KFE+D+DLPG GQ+YCTPCARHF D TR +HV++K+HKRRLKDV QEQYTQ EA+ GAG T+E+Y PAHP
Sbjct: 14 KVKGYKKSHSTKR-----------RSRDVDQIQDDLKLESQQN-KPLKFEIDEDLPGLGQYYCTPCARHFIDATTRDLHVRTKVHKRRLKDVRQEQYTQREADLGAGKTREEYVPAHP 119
BLAST of mRNA_F-distichus_contig10429.383.1 vs. uniprot
Match: A0A662Y0F3_9STRA (C2H2-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0F3_9STRA) HSP 1 Score: 122 bits (307), Expect = 4.380e-31 Identity = 72/124 (58.06%), Postives = 86/124 (69.35%), Query Frame = 1
Query: 82 MGLGQRKSKGSKGGHKTKNKQYXXXXXXXXRRKDIDQIQDELKAEEEKGVEEEKFELDDDLPGQGQFYCTPCARHFTDEKTRAVHVKSKLHKRRLKDVAQEQYTQAEAERGAGMTKEKYPPAHP 453
MG G ++KG H +K KQY R +D+DQIQD+L+ E+ KG + FE D+DLPG GQFYCTPC RHF D TR VH+K+K+HKRRLKDVAQ+QYTQ EA GAG T E Y PAHP
Sbjct: 1 MGTG--RTKGKPRAHASK-KQYKRGHATKNRSRDVDQIQDDLRVEKLKG-KPLAFEEDEDLPGLGQFYCTPCGRHFIDAITRDVHIKTKVHKRRLKDVAQKQYTQKEAMLGAGKTVETYTPAHP 120
BLAST of mRNA_F-distichus_contig10429.383.1 vs. uniprot
Match: T0QYK1_SAPDV (C2H2-type domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QYK1_SAPDV) HSP 1 Score: 122 bits (306), Expect = 9.580e-31 Identity = 71/115 (61.74%), Postives = 79/115 (68.70%), Query Frame = 1
Query: 100 KSKGSKGGHKTKNKQYXXXXXXXXRRKDIDQIQDELKAEEEKGVEEEKFELDDDLPGQGQFYCTPCARHFTDEKTRAVHVKSKLHKRRLKDVAQEQYTQAEAERGAGMTKEKYPP 444
K KG K GH TK+ R +DIDQIQD+LK EE G FELD+DLPG GQFYCTPC RHF DE R VH+KSK+HKRRLKDVAQEQY+Q EAER AG + E Y P
Sbjct: 29 KKKGYKRGHATKS-----------RSRDIDQIQDDLKKEETTGTVM-TFELDEDLPGLGQFYCTPCGRHFMDEVARTVHIKSKVHKRRLKDVAQEQYSQKEAERAAGKSVEAYVP 131
BLAST of mRNA_F-distichus_contig10429.383.1 vs. uniprot
Match: A0A4D9CVU1_9STRA (C2H2-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVU1_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.200e-30 Identity = 72/127 (56.69%), Postives = 82/127 (64.57%), Query Frame = 1
Query: 70 VAEDMGLGQRKSKGSKGGHKTKNKQYXXXXXXXXRRKDIDQIQDELKAEEEKGVEEEKFELDDDLPGQGQFYCTPCARHFTDEKTRAVHVKSKLHKRRLKDVAQEQYTQAEAERGAGMTKEKYPPAH 450
+ MG G K K H K KQY R +D+DQIQDEL+AE E+G E DDDLPG GQFYC PCARHF D++ H +SK+HKRRLKDVAQEQYTQ EAER GMT+E PPAH
Sbjct: 1 MVNSMGTGSCKKKPR---HSAKKKQYKKALCTARRPRDVDQIQDELRAEAERG-EALPMPHDDDLPGAGQFYCRPCARHFGDQQCLDHHTRSKVHKRRLKDVAQEQYTQREAERAGGMTEEVLPPAH 123
BLAST of mRNA_F-distichus_contig10429.383.1 vs. uniprot
Match: W2FRC2_PHYPR (C2H2-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2FRC2_PHYPR) HSP 1 Score: 120 bits (301), Expect = 3.480e-30 Identity = 66/107 (61.68%), Postives = 77/107 (71.96%), Query Frame = 1
Query: 133 KNKQYXXXXXXXXRRKDIDQIQDELKAEEEKGVEEEKFELDDDLPGQGQFYCTPCARHFTDEKTRAVHVKSKLHKRRLKDVAQEQYTQAEAERGAGMTKEKYPPAHP 453
K KQY R +DIDQIQD+L+ E+ G + FE D+DLPG GQFYCTPC RHF D KTR VH+K+K+HKRRLKDVAQ+QYTQ EA +GAG E Y PAHP
Sbjct: 16 KKKQYKRGHATKNRARDIDQIQDDLRVEKLTG-KSMAFEEDEDLPGLGQFYCTPCGRHFIDAKTRDVHLKTKVHKRRLKDVAQKQYTQNEAMQGAGKGVETYKPAHP 121
BLAST of mRNA_F-distichus_contig10429.383.1 vs. uniprot
Match: A0A3R7IPL6_9STRA (C2H2-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IPL6_9STRA) HSP 1 Score: 120 bits (300), Expect = 4.750e-30 Identity = 67/107 (62.62%), Postives = 76/107 (71.03%), Query Frame = 1
Query: 133 KNKQYXXXXXXXXRRKDIDQIQDELKAEEEKGVEEEKFELDDDLPGQGQFYCTPCARHFTDEKTRAVHVKSKLHKRRLKDVAQEQYTQAEAERGAGMTKEKYPPAHP 453
K KQY R +DIDQIQD+L E G ++ FE D+DLPG GQFYCTPC RHF D TR VHVK+K+HKRRLKDVAQ+QYTQ EA GAG + EKY PAHP
Sbjct: 16 KKKQYKRGHATKNRSRDIDQIQDDLCVETISG-KKMAFEEDEDLPGLGQFYCTPCGRHFIDATTRDVHVKTKVHKRRLKDVAQKQYTQNEAMMGAGKSVEKYTPAHP 121 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10429.383.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10429.383.1 >prot_F-distichus_contig10429.383.1 ID=prot_F-distichus_contig10429.383.1|Name=mRNA_F-distichus_contig10429.383.1|organism=Fucus distichus monoicous|type=polypeptide|length=152bp MGLGQRKSKGSKGGHKTKNKQYKKAHATKNRRKDIDQIQDELKAEEEKGVback to top mRNA from alignment at F-distichus_contig10429:3111..7689+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10429.383.1 ID=mRNA_F-distichus_contig10429.383.1|Name=mRNA_F-distichus_contig10429.383.1|organism=Fucus distichus monoicous|type=mRNA|length=4579bp|location=Sequence derived from alignment at F-distichus_contig10429:3111..7689+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10429:3111..7689+ >mRNA_F-distichus_contig10429.383.1 ID=mRNA_F-distichus_contig10429.383.1|Name=mRNA_F-distichus_contig10429.383.1|organism=Fucus distichus monoicous|type=CDS|length=912bp|location=Sequence derived from alignment at F-distichus_contig10429:3111..7689+ (Fucus distichus monoicous)back to top |