mRNA_F-distichus_contig103777.338.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig103777.338.1
Unique NamemRNA_F-distichus_contig103777.338.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: D8LG25_ECTSI (NADH dehydrogenase (Ubiquinone) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG25_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 5.820e-97
Identity = 167/264 (63.26%), Postives = 204/264 (77.27%), Query Frame = 1
Query:    1 LVEEQARLKKSQSARVVVVGGSYAGVEISTNLATELGRGASG--GLKVTLVTNSEILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVEGLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLARRAVYAVSHRTGP 786
            +++ +A +++   +RVVVVGGSYAGVE+S NLATELG G  G   ++VTL   SE+LS ATP NREAG+RRL +SGV V++G RV  VKE G V++   E +   D++  EEI +DL++WTAG+QPSS + SLDV KD+RGR++VDRRL+L+ A                +VYCLGDIAAVEGL+L CNAQVALQQSDYVAYNIWA+KERR+PLDFRFLNLGEMMNLGGL+GS+TTLGGRVK SGKAAGLARRAVYAV   T P
Sbjct:  254 IIKLKALVREKAVSRVVVVGGSYAGVELSCNLATELGGGRKGMGKVEVTLAAGSEVLSMATPGNREAGLRRLTESGVHVMKGARVSEVKEGGGVVLQQGEGK-GTDSTFREEIMADLLVWTAGSQPSSLLDSLDVRKDARGRIEVDRRLRLIDAAGNDGG--------VGDVYCLGDIAAVEGLELGCNAQVALQQSDYVAYNIWADKERRKPLDFRFLNLGEMMNLGGLDGSLTTLGGRVKLSGKAAGLARRAVYAVRMPTNP 508          
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A6H5JVX1_9PHAE (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVX1_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 2.890e-69
Identity = 124/221 (56.11%), Postives = 164/221 (74.21%), Query Frame = 1
Query:    1 LVEEQARLKKSQSARVVVVGGSYAGVEISTNLATELGRG--ASGGLKVTLVTNSEILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIV--GGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVEGLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFL 651
            +++ +A +++   +RVVVVGGSYAGVE+S NLATELG G    G ++VTL   SE+L+ AT  NREAG+RRL +SGV V++G RV  VKE G V++  G  + R   D++  EEI +DL++WTAG+QPSS +  LDV KD+RGR++VDR+L+++ A   A            +VYCLGDIAAVEGL+L CNAQVALQQSDYVAYNIWA+KERR+PLDFR++
Sbjct:  264 IIKLKALVREKTVSRVVVVGGSYAGVELSCNLATELGGGRKGKGKVEVTLAAGSEVLAMATSGNREAGLRRLAESGVHVMKGARVSEVKEGGGVVLQQGEGKARTGTDSAGGEEIMADLLVWTAGSQPSSLLEPLDVRKDARGRIEVDRKLRVVEAAGSAGG--------VGDVYCLGDIAAVEGLELGCNAQVALQQSDYVAYNIWADKERRKPLDFRWV 476          
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A7S4F6D1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F6D1_CHRCT)

HSP 1 Score: 153 bits (386), Expect = 6.170e-41
Identity = 99/246 (40.24%), Postives = 144/246 (58.54%), Query Frame = 1
Query:   43 RVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSE-ILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVE---GLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLARRAVYAV 768
            RVVVVGGSY GVE++ NL   LG      + +TLV  S+ +LSN+   NR  G +RLR SGV+V+    V  V EDG  +             +++++++D+V+WTAG++PS   +SL V+ D++GRV VD  L++ G                 +V+ LGD+A++    G  +   AQ A+QQ++Y A+N+ A     RPL FR+ NLGEM++LGG E S+++LG    F G  A  ARRAVYA 
Sbjct:   97 RVVVVGGSYIGVELAANLREWLGDK----VDLTLVHRSDSLLSNSEEHNRRVGTQRLRSSGVKVLLDSSVARVTEDGVALSAN---------GAEQQLSADIVVWTAGSKPSGLAASLGVEVDAKGRVVVDSALRVCGCD---------------DVHALGDVASINDASGASVPSTAQSAMQQAEYAAWNVRAALRGERPLAFRYANLGEMLSLGGAEASLSSLG-VFNFEGPVASAARRAVYAA 313          
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A6T0A1N8_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6T0A1N8_CHRCT)

HSP 1 Score: 153 bits (386), Expect = 6.310e-41
Identity = 99/246 (40.24%), Postives = 144/246 (58.54%), Query Frame = 1
Query:   43 RVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSE-ILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVE---GLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLARRAVYAV 768
            RVVVVGGSY GVE++ NL   LG      + +TLV  S+ +LSN+   NR  G +RLR SGV+V+    V  V EDG  +             +++++++D+V+WTAG++PS   +SL V+ D++GRV VD  L++ G                 +V+ LGD+A++    G  +   AQ A+QQ++Y A+N+ A     RPL FR+ NLGEM++LGG E S+++LG    F G  A  ARRAVYA 
Sbjct:   98 RVVVVGGSYIGVELAANLREWLGDK----VDLTLVHRSDSLLSNSEEHNRRVGTQRLRSSGVKVLLDSSVARVTEDGVALSAN---------GAEQQLSADIVVWTAGSKPSGLAASLGVEVDAKGRVVVDSALRVCGCD---------------DVHALGDVASINDASGASVPSTAQSAMQQAEYAAWNVRAALRGERPLAFRYANLGEMLSLGGAEASLSSLG-VFNFEGPVASAARRAVYAA 314          
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A7S4BRY4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BRY4_CHRCT)

HSP 1 Score: 153 bits (386), Expect = 5.360e-40
Identity = 99/246 (40.24%), Postives = 144/246 (58.54%), Query Frame = 1
Query:   43 RVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSE-ILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVE---GLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLARRAVYAV 768
            RVVVVGGSY GVE++ NL   LG      + +TLV  S+ +LSN+   NR  G +RLR SGV+V+    V  V EDG  +             +++++++D+V+WTAG++PS   +SL V+ D++GRV VD  L++ G                 +V+ LGD+A++    G  +   AQ A+QQ++Y A+N+ A     RPL FR+ NLGEM++LGG E S+++LG    F G  A  ARRAVYA 
Sbjct:  205 RVVVVGGSYIGVELAANLREWLGDK----VDLTLVHRSDSLLSNSEEHNRRVGTQRLRSSGVKVLLDSSVARVTEDGVALSAN---------GAEQQLSADIVVWTAGSKPSGLAASLGVEVDAKGRVVVDSALRVCGCD---------------DVHALGDVASINDASGASVPSTAQSAMQQAEYAAWNVRAALRGERPLAFRYANLGEMLSLGGAEASLSSLG-VFNFEGPVASAARRAVYAA 421          
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A7S0JEC2_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JEC2_9EUKA)

HSP 1 Score: 133 bits (334), Expect = 1.390e-32
Identity = 95/256 (37.11%), Postives = 142/256 (55.47%), Query Frame = 1
Query:   13 QARLKKSQSARVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSE-ILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAV---EGLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLARRAVYAV 768
            Q R  ++   RVV+VGGSY GVE++ NL + LG      L++TLV  +  +LS++   +R  GV+RL +SGV+V     V  +   G  +        A+ A+ +  +++DLV+WTAGT+PSS  S+L +  D RGR+  D  L++ G  +               +Y LGD+A +    G      AQ A+QQ+DY A+N+ A +     L FR+ +LGEM++LG   GS+T LG  +   G  A L+RRAVYA 
Sbjct:  171 QQRAPRAAPLRVVIVGGSYVGVELAANLQSWLGAQ----LELTLVHRAAALLSSSREFSRLVGVQRLEESGVKVHLDTTVLGIDTHGVTLRDSCAADGAEHAA-ERRLDADLVVWTAGTKPSSLASALGLPLDERGRICTDATLRVNGCSS---------------LYALGDVATLVDARGSRPPSTAQAAMQQADYAAWNVRAARLGGPTLAFRYADLGEMLSLGDGYGSLTALGA-INLQGPLASLSRRAVYAA 405          
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A0G4FP32_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FP32_VITBC)

HSP 1 Score: 127 bits (318), Expect = 1.800e-29
Identity = 91/265 (34.34%), Postives = 138/265 (52.08%), Query Frame = 1
Query:    1 LVEEQARLKK--SQSARVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSEILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEI-NSDLVIWTAGTQPSSAISSLD--VDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVEGLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLARRAVYAVSHRT 780
            L +E  R+K+   + ARVV+VGG Y GVE++TNLA  L   +       L    +++  +   NR+  +R LR++ V V     V S++   A    G EV +    S D  +  +DLVI TAG + S     ++  V++   GR+ V+R L + G                 +VY +GD+A + G++    AQ A QQ+DY+ +NIWA    ++PL +R+  LGEM+  G L+GSV  LG RV   G  A +ARR+ Y +   T
Sbjct:  234 LKKEIQRIKRIRDRPARVVLVGGGYIGVELATNLAAALSSQSPPPQISLLHRGPQLMPLSAEHNRKQAIRALREARVDVSLETSVASIRP--ASDTSGSEVVVQKKGSEDSSVLPADLVIMTAGVRASGLADMVNGRVERGRGGRLAVERTLAVKGL---------------GDVYAIGDVADLGGVEGEGTAQAAFQQADYLVWNIWASYNDKKPLAYRYTKLGEMLTFGPLDGSVAALGDRVTLGGPLASIARRSAYIIRQPT 481          
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A7S0LKG6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKG6_9EUKA)

HSP 1 Score: 123 bits (308), Expect = 8.430e-29
Identity = 88/255 (34.51%), Postives = 138/255 (54.12%), Query Frame = 1
Query:   19 RLKKSQSARVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSE-ILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEE-INSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAV---EGLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLARRAVYAV 768
            R  +    R+V+VGGSY GVE++ NL  + G        +TLV  ++ +L+++   +R  G +RL++SGV+V+    V  +  DG  +   P    A  A + E+ +++D+V+WTAGT+PS   +SL +  D  GR+  D  L++               D  + +Y LGD+A++    G      AQ A+QQ+DY A+N+ A       L FR+ +LGEM++LG   G++T LG  +   G  A L RRAVYA 
Sbjct:  183 RSTRGPPTRIVIVGGSYVGVELAANLHAKFGSQ----FDLTLVHRADALLTSSKEFSRLVGSQRLKESGVKVLLDTNVLRIDADGVDVC--PARGSAGSAGAPEQRLDADMVVWTAGTKPSRLAASLGLPLDEAGRICTDATLRV---------------DGCSSLYALGDVASLTDARGSRPPSTAQAAMQQADYAAWNVRAALLGGPTLAFRYADLGEMLSLGEGYGTLTALGA-INLQGPLASLTRRAVYAA 415          
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A7S4BRQ6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BRQ6_CHRCT)

HSP 1 Score: 118 bits (296), Expect = 1.940e-27
Identity = 77/205 (37.56%), Postives = 116/205 (56.59%), Query Frame = 1
Query:   43 RVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSE-ILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVE---GLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFR 645
            RVVVVGGSY GVE++ NL   LG      + +TLV  S+ +LSN+   NR  G +RLR SGV+V+    V  V EDG  +             +++++++D+V+WTAG++PS   +SL V+ D++GRV VD  L++ G                 +V+ LGD+A++    G  +   AQ A+QQ++Y A+N+ A     RPL FR
Sbjct:   97 RVVVVGGSYIGVELAANLREWLGDK----VDLTLVHRSDSLLSNSEEHNRRVGTQRLRSSGVKVLLDSSVARVTEDGVALSAN---------GAEQQLSADIVVWTAGSKPSGLAASLGVEVDAKGRVVVDSALRVCGCD---------------DVHALGDVASINDASGASVPSTAQSAMQQAEYAAWNVRAALRGERPLAFR 273          
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A7S4BSA4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BSA4_CHRCT)

HSP 1 Score: 118 bits (296), Expect = 1.970e-27
Identity = 77/205 (37.56%), Postives = 116/205 (56.59%), Query Frame = 1
Query:   43 RVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSE-ILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVE---GLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFR 645
            RVVVVGGSY GVE++ NL   LG      + +TLV  S+ +LSN+   NR  G +RLR SGV+V+    V  V EDG  +             +++++++D+V+WTAG++PS   +SL V+ D++GRV VD  L++ G                 +V+ LGD+A++    G  +   AQ A+QQ++Y A+N+ A     RPL FR
Sbjct:   98 RVVVVGGSYIGVELAANLREWLGDK----VDLTLVHRSDSLLSNSEEHNRRVGTQRLRSSGVKVLLDSSVARVTEDGVALSAN---------GAEQQLSADIVVWTAGSKPSGLAASLGVEVDAKGRVVVDSALRVCGCD---------------DVHALGDVASINDASGASVPSTAQSAMQQAEYAAWNVRAALRGERPLAFR 274          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG25_ECTSI5.820e-9763.26NADH dehydrogenase (Ubiquinone) n=1 Tax=Ectocarpus... [more]
A0A6H5JVX1_9PHAE2.890e-6956.11Pyr_redox_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A7S4F6D1_CHRCT6.170e-4140.24Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A6T0A1N8_CHRCT6.310e-4140.24Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4BRY4_CHRCT5.360e-4040.24Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0JEC2_9EUKA1.390e-3237.11Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A0G4FP32_VITBC1.800e-2934.34Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S0LKG6_9EUKA8.430e-2934.51Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S4BRQ6_CHRCT1.940e-2737.56Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4BSA4_CHRCT1.970e-2737.56Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig103777contigF-distichus_contig103777:125..1989 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score120.2
Seed ortholog evalue1.5e-24
Seed eggNOG ortholog70448.A0A090M0G7
KEGG koko:K17872
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009314,GO:0009416,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009987,GO:0010287,GO:0015980,GO:0016491,GO:0019646,GO:0022900,GO:0022904,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0050896,GO:0051716,GO:0055114,GO:0071214,GO:0071478,GO:0071482,GO:0104004
EggNOG free text desc.Pyridine nucleotide-disulphide oxidoreductase
EggNOG OGs34H46@3041,37M9Z@33090,COG1252@1,KOG2495@2759
EC1.6.5.9
COG Functional cat.C
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons5
Model size786
Cds size786
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig103777.338.1prot_F-distichus_contig103777.338.1Fucus distichus monoicouspolypeptideF-distichus_contig103777 125..1989 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928957.4320593-CDS-F-distichus_contig103777:124..2661622928957.4320593-CDS-F-distichus_contig103777:124..266Fucus distichus monoicousCDSF-distichus_contig103777 125..266 -
1690885081.7638083-CDS-F-distichus_contig103777:124..2661690885081.7638083-CDS-F-distichus_contig103777:124..266Fucus distichus monoicousCDSF-distichus_contig103777 125..266 -
1622928957.4490447-CDS-F-distichus_contig103777:566..6431622928957.4490447-CDS-F-distichus_contig103777:566..643Fucus distichus monoicousCDSF-distichus_contig103777 567..643 -
1690885081.7797832-CDS-F-distichus_contig103777:566..6431690885081.7797832-CDS-F-distichus_contig103777:566..643Fucus distichus monoicousCDSF-distichus_contig103777 567..643 -
1622928957.4639869-CDS-F-distichus_contig103777:806..10671622928957.4639869-CDS-F-distichus_contig103777:806..1067Fucus distichus monoicousCDSF-distichus_contig103777 807..1067 -
1690885081.7938337-CDS-F-distichus_contig103777:806..10671690885081.7938337-CDS-F-distichus_contig103777:806..1067Fucus distichus monoicousCDSF-distichus_contig103777 807..1067 -
1622928957.4744477-CDS-F-distichus_contig103777:1419..15661622928957.4744477-CDS-F-distichus_contig103777:1419..1566Fucus distichus monoicousCDSF-distichus_contig103777 1420..1566 -
1690885081.8030512-CDS-F-distichus_contig103777:1419..15661690885081.8030512-CDS-F-distichus_contig103777:1419..1566Fucus distichus monoicousCDSF-distichus_contig103777 1420..1566 -
1622928957.488451-CDS-F-distichus_contig103777:1830..19891622928957.488451-CDS-F-distichus_contig103777:1830..1989Fucus distichus monoicousCDSF-distichus_contig103777 1831..1989 -
1690885081.8114905-CDS-F-distichus_contig103777:1830..19891690885081.8114905-CDS-F-distichus_contig103777:1830..1989Fucus distichus monoicousCDSF-distichus_contig103777 1831..1989 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig103777.338.1

>prot_F-distichus_contig103777.338.1 ID=prot_F-distichus_contig103777.338.1|Name=mRNA_F-distichus_contig103777.338.1|organism=Fucus distichus monoicous|type=polypeptide|length=262bp
LVEEQARLKKSQSARVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVT
NSEILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVR
LADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLL
GARTEANSNSETTMDAAAEVYCLGDIAAVEGLDLVCNAQVALQQSDYVAY
NIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLAR
RAVYAVSHRTGP
back to top

mRNA from alignment at F-distichus_contig103777:125..1989-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig103777.338.1 ID=mRNA_F-distichus_contig103777.338.1|Name=mRNA_F-distichus_contig103777.338.1|organism=Fucus distichus monoicous|type=mRNA|length=1865bp|location=Sequence derived from alignment at F-distichus_contig103777:125..1989- (Fucus distichus monoicous)
CTCGTGGAAGAGCAGGCGCGCTTGAAAAAGTCTCAGAGTGCGCGCGTTGT TGTCGTTGGTGGGAGCTATGCCGGCGTGGAAATCTCTACTAACCTGGCTA CGGAGCTGGGAAGAGGAGCATCGGGGGGCTTGAAGGTTACACTTGTGACC AATTCTGAGGTACGCGTCACCGAAGCAGTTCATGGTTTAGGTGTTTTCTC ATAAATCAGAAGTAGTAGGTTGTGCCAGGTGGCGTGGAGAGACAGCAGAA GCTGTGATTCTTGGTCCTCAATGCTGTCTCCGTGACTTCGATACCTGAAG TGGTTACGAATGTTGTCCTAGCTTTTGGCGGAACGAGATATTTCATGACG CACAGCAGCCCTCGAACTATGTATCCACATCAAGTCCCGCCCTGGCTTTC CTTCCCCCTTCTCCGCATCGCAGATACTTTCCAATGCAACTCCCAGCAAC CGTGAGGCTGGAGTACGCCGCTTGAGACAGTCGGGCGTGCGTGTCGTGGA GGGAGTGAGGGTGAAAAGCGTGAAGGAAGACGGTGCCGTCATTGTTGGAG GACCAGAGGTTCGGCTTGCCGTCGGAAACGATTTGCACGCTCATTGTCTT GTGCGGTCGTCGCGTGACTGAATAAAAAAAAATGCCATGTTCCATTTTGT GATACGCGCTCGGTGAAATGTTGTTGAGCCGACGACGAAGACCTGCTCTT CTTTGGGCGAGAGGTTCACCTCTGACGCGTCGTGCAATCCTCTCTCCCAT GTGCTGACGTTCGCCGGTGTGGAGAAGTACCCAAGTTTGTCCTATCACGT CACCTAAGTGAGGTCGGAAAAATCGGATGATTTTGATGCACCTAGTAAGC GACATTGAGAAACCTATGCTCAGCGCTTGGCACCTCGATACCGAAAGGTG ATTCCTCGCCCCTAACTCCCAGGACGATGCTTCTTCAGATGAGGAGATCA ACTCGGACCTGGTCATTTGGACTGCTGGCACTCAGCCTAGCTCTGCGATC TCTTCTTTGGATGTGGATAAAGACTCGAGGGGTCGCGTTAAGGTTGACCG CCGCCTCAAGCTTTTGGGGGCGAGAACAGAAGCCAACAGTAACAGCGAGA CCACGATGGACGCAGCTGCTGAGGTGTACTGCTTGGGTGACATCGCTGCA GTTGAAGGGCTCGACTTGGTCTGCAATGCTCAGGTGCCAACGAAATTCAC GCTAGAGCACTGGATCGACTTCCCGATTTGACATTCTGTCTGTTTATTCC TTCTTGAGGAATGAAATGGATCGAGCCGATGATACTATCGTCATCACCGC GTTGATGATCCAATCGCCGTTGCTGCTCGAAATGCCCCCGCCCCAGGTGG CCCTCCAACAGTCGGACTACGTAGCTTACAACATATGGGCCGAGAAGGAA CGGCGTCGTCCACTGGACTTCAGGTAGCATTTCGATGCGTCCCGACGCTT TCCGATACTGGCAGAATTCTGTAAGAAACGAGAAACTCCGTGTGCATCAC ACACGGGAGGACGTCATATTTGTCTCATCGAGCGAGTGCGGTGCTTTTTC GTCCCTTGTGATTTTTTGCCAGAGACGGCTACTAATAACAATGCGTGGGT ACCTCCATGAACGCTCGATCCAACTGCTAGTATCAAGCAATTCGGCCTAC GATTCATGACATACGTGAAATGAAATATCTCTCTCGTTATCGCAACCGTG TTCGACTGCCCACCGCCACCTAGATTCTTGAATCTAGGAGAAATGATGAA TCTCGGTGGCCTCGAAGGTTCGGTGACGACGCTTGGCGGAAGGGTGAAAT TTTCGGGAAAGGCGGCGGGTCTGGCCAGAAGAGCGGTGTACGCGGTGAGT CACCGTACAGGACCT
back to top

Coding sequence (CDS) from alignment at F-distichus_contig103777:125..1989-

>mRNA_F-distichus_contig103777.338.1 ID=mRNA_F-distichus_contig103777.338.1|Name=mRNA_F-distichus_contig103777.338.1|organism=Fucus distichus monoicous|type=CDS|length=1572bp|location=Sequence derived from alignment at F-distichus_contig103777:125..1989- (Fucus distichus monoicous)
CTCGTGGAAGAGCAGGCGCGCTTGAAAAAGTCTCAGAGTGCGCGCGTTGT
TGTCGTTGGTGGGAGCTATGCCGGCGTGGAAATCTCTACTAACCTGGCTA
CGGAGCTGGGAAGAGGAGCATCGGGGGGCTTGAAGGTTACACTTGTGACC
AATTCTGAGCTCGTGGAAGAGCAGGCGCGCTTGAAAAAGTCTCAGAGTGC
GCGCGTTGTTGTCGTTGGTGGGAGCTATGCCGGCGTGGAAATCTCTACTA
ACCTGGCTACGGAGCTGGGAAGAGGAGCATCGGGGGGCTTGAAGGTTACA
CTTGTGACCAATTCTGAGATACTTTCCAATGCAACTCCCAGCAACCGTGA
GGCTGGAGTACGCCGCTTGAGACAGTCGGGCGTGCGTGTCGTGGAGGGAG
TGAGGGTGAAAAGCGTGAAGGAAGACGGTGCCGTCATTGTTGGAGGACCA
GAGGTTCGGCTTGCCATACTTTCCAATGCAACTCCCAGCAACCGTGAGGC
TGGAGTACGCCGCTTGAGACAGTCGGGCGTGCGTGTCGTGGAGGGAGTGA
GGGTGAAAAGCGTGAAGGAAGACGGTGCCGTCATTGTTGGAGGACCAGAG
GTTCGGCTTGCCGACGATGCTTCTTCAGATGAGGAGATCAACTCGGACCT
GGTCATTTGGACTGCTGGCACTCAGCCTAGCTCTGCGATCTCTTCTTTGG
ATGTGGATAAAGACTCGAGGGGTCGCGTTAAGGTTGACCGCCGCCTCAAG
CTTTTGGGGGCGAGAACAGAAGCCAACAGTAACAGCGAGACCACGATGGA
CGCAGCTGCTGAGGTGTACTGCTTGGGTGACATCGCTGCAGTTGAAGGGC
TCGACTTGGTCTGCAATGCTCAGGACGATGCTTCTTCAGATGAGGAGATC
AACTCGGACCTGGTCATTTGGACTGCTGGCACTCAGCCTAGCTCTGCGAT
CTCTTCTTTGGATGTGGATAAAGACTCGAGGGGTCGCGTTAAGGTTGACC
GCCGCCTCAAGCTTTTGGGGGCGAGAACAGAAGCCAACAGTAACAGCGAG
ACCACGATGGACGCAGCTGCTGAGGTGTACTGCTTGGGTGACATCGCTGC
AGTTGAAGGGCTCGACTTGGTCTGCAATGCTCAGGTGGCCCTCCAACAGT
CGGACTACGTAGCTTACAACATATGGGCCGAGAAGGAACGGCGTCGTCCA
CTGGACTTCAGGTGGCCCTCCAACAGTCGGACTACGTAGCTTACAACATA
TGGGCCGAGAAGGAACGGCGTCGTCCACTGGACTTCAGATTCTTGAATCT
AGGAGAAATGATGAATCTCGGTGGCCTCGAAGGTTCGGTGACGACGCTTG
GCGGAAGGGTGAAATTTTCGGGAAAGGCGGCGGGTCTGGCCAGAAGAGCG
GTGTACGCGGTGAGTCACCGTACAGGACCTATTCTTGAATCTAGGAGAAA
TGATGAATCTCGGTGGCCTCGAAGGTTCGGTGACGACGCTTGGCGGAAGG
GTGAAATTTTCGGGAAAGGCGGCGGGTCTGGCCAGAAGAGCGGTGTACGC
GGTGAGTCACCGTACAGGACCT
back to top