mRNA_F-distichus_contig103777.338.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: D8LG25_ECTSI (NADH dehydrogenase (Ubiquinone) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG25_ECTSI) HSP 1 Score: 303 bits (776), Expect = 5.820e-97 Identity = 167/264 (63.26%), Postives = 204/264 (77.27%), Query Frame = 1
Query: 1 LVEEQARLKKSQSARVVVVGGSYAGVEISTNLATELGRGASG--GLKVTLVTNSEILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVEGLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLARRAVYAVSHRTGP 786
+++ +A +++ +RVVVVGGSYAGVE+S NLATELG G G ++VTL SE+LS ATP NREAG+RRL +SGV V++G RV VKE G V++ E + D++ EEI +DL++WTAG+QPSS + SLDV KD+RGR++VDRRL+L+ A +VYCLGDIAAVEGL+L CNAQVALQQSDYVAYNIWA+KERR+PLDFRFLNLGEMMNLGGL+GS+TTLGGRVK SGKAAGLARRAVYAV T P
Sbjct: 254 IIKLKALVREKAVSRVVVVGGSYAGVELSCNLATELGGGRKGMGKVEVTLAAGSEVLSMATPGNREAGLRRLTESGVHVMKGARVSEVKEGGGVVLQQGEGK-GTDSTFREEIMADLLVWTAGSQPSSLLDSLDVRKDARGRIEVDRRLRLIDAAGNDGG--------VGDVYCLGDIAAVEGLELGCNAQVALQQSDYVAYNIWADKERRKPLDFRFLNLGEMMNLGGLDGSLTTLGGRVKLSGKAAGLARRAVYAVRMPTNP 508
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A6H5JVX1_9PHAE (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVX1_9PHAE) HSP 1 Score: 230 bits (587), Expect = 2.890e-69 Identity = 124/221 (56.11%), Postives = 164/221 (74.21%), Query Frame = 1
Query: 1 LVEEQARLKKSQSARVVVVGGSYAGVEISTNLATELGRG--ASGGLKVTLVTNSEILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIV--GGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVEGLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFL 651
+++ +A +++ +RVVVVGGSYAGVE+S NLATELG G G ++VTL SE+L+ AT NREAG+RRL +SGV V++G RV VKE G V++ G + R D++ EEI +DL++WTAG+QPSS + LDV KD+RGR++VDR+L+++ A A +VYCLGDIAAVEGL+L CNAQVALQQSDYVAYNIWA+KERR+PLDFR++
Sbjct: 264 IIKLKALVREKTVSRVVVVGGSYAGVELSCNLATELGGGRKGKGKVEVTLAAGSEVLAMATSGNREAGLRRLAESGVHVMKGARVSEVKEGGGVVLQQGEGKARTGTDSAGGEEIMADLLVWTAGSQPSSLLEPLDVRKDARGRIEVDRKLRVVEAAGSAGG--------VGDVYCLGDIAAVEGLELGCNAQVALQQSDYVAYNIWADKERRKPLDFRWV 476
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A7S4F6D1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F6D1_CHRCT) HSP 1 Score: 153 bits (386), Expect = 6.170e-41 Identity = 99/246 (40.24%), Postives = 144/246 (58.54%), Query Frame = 1
Query: 43 RVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSE-ILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVE---GLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLARRAVYAV 768
RVVVVGGSY GVE++ NL LG + +TLV S+ +LSN+ NR G +RLR SGV+V+ V V EDG + +++++++D+V+WTAG++PS +SL V+ D++GRV VD L++ G +V+ LGD+A++ G + AQ A+QQ++Y A+N+ A RPL FR+ NLGEM++LGG E S+++LG F G A ARRAVYA
Sbjct: 97 RVVVVGGSYIGVELAANLREWLGDK----VDLTLVHRSDSLLSNSEEHNRRVGTQRLRSSGVKVLLDSSVARVTEDGVALSAN---------GAEQQLSADIVVWTAGSKPSGLAASLGVEVDAKGRVVVDSALRVCGCD---------------DVHALGDVASINDASGASVPSTAQSAMQQAEYAAWNVRAALRGERPLAFRYANLGEMLSLGGAEASLSSLG-VFNFEGPVASAARRAVYAA 313
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A6T0A1N8_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6T0A1N8_CHRCT) HSP 1 Score: 153 bits (386), Expect = 6.310e-41 Identity = 99/246 (40.24%), Postives = 144/246 (58.54%), Query Frame = 1
Query: 43 RVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSE-ILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVE---GLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLARRAVYAV 768
RVVVVGGSY GVE++ NL LG + +TLV S+ +LSN+ NR G +RLR SGV+V+ V V EDG + +++++++D+V+WTAG++PS +SL V+ D++GRV VD L++ G +V+ LGD+A++ G + AQ A+QQ++Y A+N+ A RPL FR+ NLGEM++LGG E S+++LG F G A ARRAVYA
Sbjct: 98 RVVVVGGSYIGVELAANLREWLGDK----VDLTLVHRSDSLLSNSEEHNRRVGTQRLRSSGVKVLLDSSVARVTEDGVALSAN---------GAEQQLSADIVVWTAGSKPSGLAASLGVEVDAKGRVVVDSALRVCGCD---------------DVHALGDVASINDASGASVPSTAQSAMQQAEYAAWNVRAALRGERPLAFRYANLGEMLSLGGAEASLSSLG-VFNFEGPVASAARRAVYAA 314
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A7S4BRY4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BRY4_CHRCT) HSP 1 Score: 153 bits (386), Expect = 5.360e-40 Identity = 99/246 (40.24%), Postives = 144/246 (58.54%), Query Frame = 1
Query: 43 RVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSE-ILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVE---GLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLARRAVYAV 768
RVVVVGGSY GVE++ NL LG + +TLV S+ +LSN+ NR G +RLR SGV+V+ V V EDG + +++++++D+V+WTAG++PS +SL V+ D++GRV VD L++ G +V+ LGD+A++ G + AQ A+QQ++Y A+N+ A RPL FR+ NLGEM++LGG E S+++LG F G A ARRAVYA
Sbjct: 205 RVVVVGGSYIGVELAANLREWLGDK----VDLTLVHRSDSLLSNSEEHNRRVGTQRLRSSGVKVLLDSSVARVTEDGVALSAN---------GAEQQLSADIVVWTAGSKPSGLAASLGVEVDAKGRVVVDSALRVCGCD---------------DVHALGDVASINDASGASVPSTAQSAMQQAEYAAWNVRAALRGERPLAFRYANLGEMLSLGGAEASLSSLG-VFNFEGPVASAARRAVYAA 421
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A7S0JEC2_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JEC2_9EUKA) HSP 1 Score: 133 bits (334), Expect = 1.390e-32 Identity = 95/256 (37.11%), Postives = 142/256 (55.47%), Query Frame = 1
Query: 13 QARLKKSQSARVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSE-ILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAV---EGLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLARRAVYAV 768
Q R ++ RVV+VGGSY GVE++ NL + LG L++TLV + +LS++ +R GV+RL +SGV+V V + G + A+ A+ + +++DLV+WTAGT+PSS S+L + D RGR+ D L++ G + +Y LGD+A + G AQ A+QQ+DY A+N+ A + L FR+ +LGEM++LG GS+T LG + G A L+RRAVYA
Sbjct: 171 QQRAPRAAPLRVVIVGGSYVGVELAANLQSWLGAQ----LELTLVHRAAALLSSSREFSRLVGVQRLEESGVKVHLDTTVLGIDTHGVTLRDSCAADGAEHAA-ERRLDADLVVWTAGTKPSSLASALGLPLDERGRICTDATLRVNGCSS---------------LYALGDVATLVDARGSRPPSTAQAAMQQADYAAWNVRAARLGGPTLAFRYADLGEMLSLGDGYGSLTALGA-INLQGPLASLSRRAVYAA 405
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A0G4FP32_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FP32_VITBC) HSP 1 Score: 127 bits (318), Expect = 1.800e-29 Identity = 91/265 (34.34%), Postives = 138/265 (52.08%), Query Frame = 1
Query: 1 LVEEQARLKK--SQSARVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSEILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEI-NSDLVIWTAGTQPSSAISSLD--VDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVEGLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLARRAVYAVSHRT 780
L +E R+K+ + ARVV+VGG Y GVE++TNLA L + L +++ + NR+ +R LR++ V V V S++ A G EV + S D + +DLVI TAG + S ++ V++ GR+ V+R L + G +VY +GD+A + G++ AQ A QQ+DY+ +NIWA ++PL +R+ LGEM+ G L+GSV LG RV G A +ARR+ Y + T
Sbjct: 234 LKKEIQRIKRIRDRPARVVLVGGGYIGVELATNLAAALSSQSPPPQISLLHRGPQLMPLSAEHNRKQAIRALREARVDVSLETSVASIRP--ASDTSGSEVVVQKKGSEDSSVLPADLVIMTAGVRASGLADMVNGRVERGRGGRLAVERTLAVKGL---------------GDVYAIGDVADLGGVEGEGTAQAAFQQADYLVWNIWASYNDKKPLAYRYTKLGEMLTFGPLDGSVAALGDRVTLGGPLASIARRSAYIIRQPT 481
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A7S0LKG6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKG6_9EUKA) HSP 1 Score: 123 bits (308), Expect = 8.430e-29 Identity = 88/255 (34.51%), Postives = 138/255 (54.12%), Query Frame = 1
Query: 19 RLKKSQSARVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSE-ILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEE-INSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAV---EGLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFRFLNLGEMMNLGGLEGSVTTLGGRVKFSGKAAGLARRAVYAV 768
R + R+V+VGGSY GVE++ NL + G +TLV ++ +L+++ +R G +RL++SGV+V+ V + DG + P A A + E+ +++D+V+WTAGT+PS +SL + D GR+ D L++ D + +Y LGD+A++ G AQ A+QQ+DY A+N+ A L FR+ +LGEM++LG G++T LG + G A L RRAVYA
Sbjct: 183 RSTRGPPTRIVIVGGSYVGVELAANLHAKFGSQ----FDLTLVHRADALLTSSKEFSRLVGSQRLKESGVKVLLDTNVLRIDADGVDVC--PARGSAGSAGAPEQRLDADMVVWTAGTKPSRLAASLGLPLDEAGRICTDATLRV---------------DGCSSLYALGDVASLTDARGSRPPSTAQAAMQQADYAAWNVRAALLGGPTLAFRYADLGEMLSLGEGYGTLTALGA-INLQGPLASLTRRAVYAA 415
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A7S4BRQ6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BRQ6_CHRCT) HSP 1 Score: 118 bits (296), Expect = 1.940e-27 Identity = 77/205 (37.56%), Postives = 116/205 (56.59%), Query Frame = 1
Query: 43 RVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSE-ILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVE---GLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFR 645
RVVVVGGSY GVE++ NL LG + +TLV S+ +LSN+ NR G +RLR SGV+V+ V V EDG + +++++++D+V+WTAG++PS +SL V+ D++GRV VD L++ G +V+ LGD+A++ G + AQ A+QQ++Y A+N+ A RPL FR
Sbjct: 97 RVVVVGGSYIGVELAANLREWLGDK----VDLTLVHRSDSLLSNSEEHNRRVGTQRLRSSGVKVLLDSSVARVTEDGVALSAN---------GAEQQLSADIVVWTAGSKPSGLAASLGVEVDAKGRVVVDSALRVCGCD---------------DVHALGDVASINDASGASVPSTAQSAMQQAEYAAWNVRAALRGERPLAFR 273
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Match: A0A7S4BSA4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BSA4_CHRCT) HSP 1 Score: 118 bits (296), Expect = 1.970e-27 Identity = 77/205 (37.56%), Postives = 116/205 (56.59%), Query Frame = 1
Query: 43 RVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTNSE-ILSNATPSNREAGVRRLRQSGVRVVEGVRVKSVKEDGAVIVGGPEVRLADDASSDEEINSDLVIWTAGTQPSSAISSLDVDKDSRGRVKVDRRLKLLGARTEANSNSETTMDAAAEVYCLGDIAAVE---GLDLVCNAQVALQQSDYVAYNIWAEKERRRPLDFR 645
RVVVVGGSY GVE++ NL LG + +TLV S+ +LSN+ NR G +RLR SGV+V+ V V EDG + +++++++D+V+WTAG++PS +SL V+ D++GRV VD L++ G +V+ LGD+A++ G + AQ A+QQ++Y A+N+ A RPL FR
Sbjct: 98 RVVVVGGSYIGVELAANLREWLGDK----VDLTLVHRSDSLLSNSEEHNRRVGTQRLRSSGVKVLLDSSVARVTEDGVALSAN---------GAEQQLSADIVVWTAGSKPSGLAASLGVEVDAKGRVVVDSALRVCGCD---------------DVHALGDVASINDASGASVPSTAQSAMQQAEYAAWNVRAALRGERPLAFR 274 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig103777.338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig103777.338.1 >prot_F-distichus_contig103777.338.1 ID=prot_F-distichus_contig103777.338.1|Name=mRNA_F-distichus_contig103777.338.1|organism=Fucus distichus monoicous|type=polypeptide|length=262bp LVEEQARLKKSQSARVVVVGGSYAGVEISTNLATELGRGASGGLKVTLVTback to top mRNA from alignment at F-distichus_contig103777:125..1989- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig103777.338.1 ID=mRNA_F-distichus_contig103777.338.1|Name=mRNA_F-distichus_contig103777.338.1|organism=Fucus distichus monoicous|type=mRNA|length=1865bp|location=Sequence derived from alignment at F-distichus_contig103777:125..1989- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig103777:125..1989- >mRNA_F-distichus_contig103777.338.1 ID=mRNA_F-distichus_contig103777.338.1|Name=mRNA_F-distichus_contig103777.338.1|organism=Fucus distichus monoicous|type=CDS|length=1572bp|location=Sequence derived from alignment at F-distichus_contig103777:125..1989- (Fucus distichus monoicous)back to top |