mRNA_F-distichus_contig103744.332.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig103744.332.1
Unique NamemRNA_F-distichus_contig103744.332.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig103744.332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig103744contigF-distichus_contig103744:408..1214 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size809
Cds size807
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928957.008368-CDS-F-distichus_contig103744:407..12141622928957.008368-CDS-F-distichus_contig103744:407..1214Fucus distichus monoicousCDSF-distichus_contig103744 408..1214 +
1690885081.5818264-CDS-F-distichus_contig103744:407..12141690885081.5818264-CDS-F-distichus_contig103744:407..1214Fucus distichus monoicousCDSF-distichus_contig103744 408..1214 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig103744.332.1prot_F-distichus_contig103744.332.1Fucus distichus monoicouspolypeptideF-distichus_contig103744 408..1214 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig103744.332.1

>prot_F-distichus_contig103744.332.1 ID=prot_F-distichus_contig103744.332.1|Name=mRNA_F-distichus_contig103744.332.1|organism=Fucus distichus monoicous|type=polypeptide|length=269bp
MEGGGGGKPGYGDGDHGEFARGVATAAVNGVRSIGAGGSGYDGVMERGLY
TDGDGVGASGGIASNDDREGYNFDGFSWPQQQRGVEGDAQHPSTLWPPEQ
AEKPHEPEPWGKEYAQLFAPALDVPSGRETGDHQMNVGPEDGPPLTSSQV
VPPPFPDWFEEQFGTGELRAPGSSATGDDPSAPETAGSCDGDRGVSVSGK
RSMELGETLSFPVALGAAPSSFHPPGADSEAGGGQRTSALRVPQPSETPD
IRWGSPDASGPLDGVFTPQ
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mRNA from alignment at F-distichus_contig103744:408..1214+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig103744.332.1 ID=mRNA_F-distichus_contig103744.332.1|Name=mRNA_F-distichus_contig103744.332.1|organism=Fucus distichus monoicous|type=mRNA|length=807bp|location=Sequence derived from alignment at F-distichus_contig103744:408..1214+ (Fucus distichus monoicous)
ATGGAGGGAGGCGGCGGTGGAAAGCCTGGGTATGGGGATGGCGACCACGG
CGAGTTCGCCAGGGGGGTAGCAACAGCTGCGGTGAACGGTGTCAGGAGTA
TTGGTGCAGGAGGCAGCGGTTACGATGGCGTGATGGAGAGGGGTTTGTAC
ACAGATGGCGATGGCGTCGGCGCTAGCGGAGGTATTGCTTCGAATGATGA
TAGAGAAGGTTATAATTTTGATGGCTTCAGCTGGCCGCAGCAGCAGCGGG
GGGTGGAGGGAGATGCCCAACATCCTTCGACTCTGTGGCCACCAGAACAA
GCAGAGAAGCCTCACGAACCCGAGCCGTGGGGAAAAGAATACGCTCAGCT
GTTCGCCCCGGCCCTTGATGTCCCGTCCGGCAGAGAAACAGGTGATCACC
AGATGAATGTGGGGCCTGAAGATGGACCACCCTTAACATCGTCCCAAGTG
GTACCACCGCCGTTTCCCGATTGGTTCGAGGAACAGTTTGGGACAGGGGA
GCTTCGCGCACCGGGATCGTCGGCCACGGGCGACGACCCTTCGGCCCCCG
AAACCGCGGGTAGCTGCGATGGGGATAGAGGCGTTTCTGTTTCTGGGAAG
AGGAGCATGGAATTGGGCGAAACTCTTTCCTTCCCCGTGGCGCTCGGCGC
TGCACCGAGCTCCTTCCACCCGCCAGGCGCTGACTCGGAGGCCGGAGGGG
GACAGCGTACGAGTGCACTCCGGGTTCCACAACCATCAGAAACGCCTGAT
ATACGATGGGGATCTCCCGATGCATCGGGCCCGCTGGATGGCGTTTTTAC
TCCGCAG
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Coding sequence (CDS) from alignment at F-distichus_contig103744:408..1214+

>mRNA_F-distichus_contig103744.332.1 ID=mRNA_F-distichus_contig103744.332.1|Name=mRNA_F-distichus_contig103744.332.1|organism=Fucus distichus monoicous|type=CDS|length=1614bp|location=Sequence derived from alignment at F-distichus_contig103744:408..1214+ (Fucus distichus monoicous)
ATGGAGGGAGGCGGCGGTGGAAAGCCTGGGTATGGGGATGGCGACCACGG
CGAGTTCGCCAGGGGGGTAGCAACAGCTGCGGTGAACGGTGTCAGGAGTA
TTGGTGCAGGAGGCAGCGGTTACGATGGCGTGATGGAGAGGGGTTTGTAC
ACAGATGGCGATGGCGTCGGCGCTAGCGGAGGTATTGCTTCGAATGATGA
TAGAGAAGGTTATAATTTTGATGGCTTCAGCTGGCCGCAGCAGCAGCGGG
GGGTGGAGGGAGATGCCCAACATCCTTCGACTCTGTGGCCACCAGAACAA
GCAGAGAAGCCTCACGAACCCGAGCCGTGGGGAAAAGAATACGCTCAGCT
GTTCGCCCCGGCCCTTGATGTCCCGTCCGGCAGAGAAACAGGTGATCACC
AGATGAATGTGGGGCCTGAAGATGGACCACCCTTAACATCGTCCCAAGTG
GTACCACCGCCGTTTCCCGATTGGTTCGAGGAACAGTTTGGGACAGGGGA
GCTTCGCGCACCGGGATCGTCGGCCACGGGCGACGACCCTTCGGCCCCCG
AAACCGCGGGTAGCTGCGATGGGGATAGAGGCGTTTCTGTTTCTGGGAAG
AGGAGCATGGAATTGGGCGAAACTCTTTCCTTCCCCGTGGCGCTCGGCGC
TGCACCGAGCTCCTTCCACCCGCCAGGCGCTGACTCGGAGGCCGGAGGGG
GACAGCGTACGAGTGCACTCCGGGTTCCACAACCATCAGAAACGCCTGAT
ATACGATGGGGATCTCCCGATGCATCGGGCCCGCTGGATGGCGTTTTTAC
TCCGCAGATGGAGGGAGGCGGCGGTGGAAAGCCTGGGTATGGGGATGGCG
ACCACGGCGAGTTCGCCAGGGGGGTAGCAACAGCTGCGGTGAACGGTGTC
AGGAGTATTGGTGCAGGAGGCAGCGGTTACGATGGCGTGATGGAGAGGGG
TTTGTACACAGATGGCGATGGCGTCGGCGCTAGCGGAGGTATTGCTTCGA
ATGATGATAGAGAAGGTTATAATTTTGATGGCTTCAGCTGGCCGCAGCAG
CAGCGGGGGGTGGAGGGAGATGCCCAACATCCTTCGACTCTGTGGCCACC
AGAACAAGCAGAGAAGCCTCACGAACCCGAGCCGTGGGGAAAAGAATACG
CTCAGCTGTTCGCCCCGGCCCTTGATGTCCCGTCCGGCAGAGAAACAGGT
GATCACCAGATGAATGTGGGGCCTGAAGATGGACCACCCTTAACATCGTC
CCAAGTGGTACCACCGCCGTTTCCCGATTGGTTCGAGGAACAGTTTGGGA
CAGGGGAGCTTCGCGCACCGGGATCGTCGGCCACGGGCGACGACCCTTCG
GCCCCCGAAACCGCGGGTAGCTGCGATGGGGATAGAGGCGTTTCTGTTTC
TGGGAAGAGGAGCATGGAATTGGGCGAAACTCTTTCCTTCCCCGTGGCGC
TCGGCGCTGCACCGAGCTCCTTCCACCCGCCAGGCGCTGACTCGGAGGCC
GGAGGGGGACAGCGTACGAGTGCACTCCGGGTTCCACAACCATCAGAAAC
GCCTGATATACGATGGGGATCTCCCGATGCATCGGGCCCGCTGGATGGCG
TTTTTACTCCGCAG
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