mRNA_F-distichus_contig10371.330.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10371.330.1 vs. uniprot
Match: D8LP06_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP06_ECTSI) HSP 1 Score: 205 bits (522), Expect = 2.070e-61 Identity = 103/146 (70.55%), Postives = 122/146 (83.56%), Query Frame = 1
Query: 1 QAYLNKLAVQAAQSRWREVDTDSGSSRVQVAILTEKIVYLTKHMQRNPQDFHSRRGLIAMVNSRRKQLNYYFSKEPDNCLEMCQALGIRFRPKTKVRSRDQRYAAFKNTKSKIGEARRTDLINKEREQQRQTVQDRRKASRAARGY 438
QAYLNKLA QAAQ +WR+ D D+GS R+ VAILTEKIVYLTKHMQ++P D+HSRRGLI MVN RR+QLNYYF KEP CLEMC LGIRFRPKTKVR R+QRYAA+ NTKSKIG ARRT ++NKER +Q +++++ A+R ARGY
Sbjct: 93 QAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFKKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAMLNKERVDHKQVLKEQKLAARRARGY 238
BLAST of mRNA_F-distichus_contig10371.330.1 vs. uniprot
Match: A0A835ZJ48_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ48_9STRA) HSP 1 Score: 161 bits (407), Expect = 3.170e-44 Identity = 73/114 (64.04%), Postives = 98/114 (85.96%), Query Frame = 1
Query: 1 QAYLNKLAVQAAQSRWREVDTDSGSSRVQVAILTEKIVYLTKHMQRNPQDFHSRRGLIAMVNSRRKQLNYYFSKEPDNCLEMCQALGIRFRPKTKVRSRDQRYAAFKNTKSKIG 342
Q YLN+LA+QAA+ W+ + DSGS+ VQVAI+TE+I+YLTKH+Q +P+DFHSRRGLIA+VN+RR QLNY F EP CL++C +LGIRF+P++ V+SR+Q+Y++FKNTKSKIG
Sbjct: 105 QPYLNRLAMQAARREWQRSENDSGSAEVQVAIMTERIIYLTKHLQTHPKDFHSRRGLIALVNNRRSQLNYLFENEPQRCLDLCASLGIRFKPRSAVQSREQKYSSFKNTKSKIG 218
BLAST of mRNA_F-distichus_contig10371.330.1 vs. uniprot
Match: A0A835ZDP8_9STRA (Tetrapyrrole methylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP8_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.810e-40 Identity = 73/114 (64.04%), Postives = 97/114 (85.09%), Query Frame = 1
Query: 1 QAYLNKLAVQAAQSRWREVDTDSGSSRVQVAILTEKIVYLTKHMQRNPQDFHSRRGLIAMVNSRRKQLNYYFSKEPDNCLEMCQALGIRFRPKTKVRSRDQRYAAFKNTKSKIG 342
Q YLN+LA+QAA+ W+ D DSGS+ VQVAI+TE+I+YLTKHMQ +P+DFHSRRGLIA+VN RR QLN+ F + + CLE+C +LGIRF+P++ V+SR+Q+Y++FKNTKSKIG
Sbjct: 76 QPYLNRLAMQAARREWQRSDNDSGSAEVQVAIMTERIIYLTKHMQTHPKDFHSRRGLIALVNKRRSQLNFLFEHDAERCLELCASLGIRFKPRSAVQSREQKYSSFKNTKSKIG 189
BLAST of mRNA_F-distichus_contig10371.330.1 vs. uniprot
Match: A0A7S2S8K6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8K6_9STRA) HSP 1 Score: 112 bits (280), Expect = 8.940e-26 Identity = 51/104 (49.04%), Postives = 75/104 (72.12%), Query Frame = 1
Query: 7 YLNKLAVQAAQSRWREVDTDSGSSRVQVAILTEKIVYLTKHMQRNPQDFHSRRGLIAMVNSRRKQLNYYFSKEPDNCLEMCQALGIRFRPKTKVRSRDQRYAAF 318
+LN A+ AAQ +W+ D+DSGS Q+A+ E+I YLT H+QRNP+DF SRRGL+A+VN RR+ LNY + K P+ + M LG+RF+P V++R+++YA +
Sbjct: 112 FLNLQALLAAQQKWKRHDSDSGSPEYQIAVAHERIKYLTAHLQRNPKDFASRRGLVAIVNKRRRLLNYLYRKNPEKAMGMVTELGVRFKPPGTVQTREEKYAVY 215
BLAST of mRNA_F-distichus_contig10371.330.1 vs. uniprot
Match: A0A482SQL1_9ARCH (30S ribosomal protein S15 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQL1_9ARCH) HSP 1 Score: 107 bits (268), Expect = 5.970e-25 Identity = 55/124 (44.35%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 13 NKLAVQAAQSRWREVDTDSGSSRVQVAILTEKIVYLTKHMQRNPQDFHSRRGLIAMVNSRRKQLNYYFSKEPDNCLEMCQALGIRFRPKTKVRSRDQRYAAFKNTKSKIGEARRTDLINKEREQ 384
N+ A+ AA +WR + D+GS VQVA++TE+I YLT H+ ++PQD ++RGL A+VN RR LN+ S + + +MC LGIR++P +V ++ +Y+AFKNTK+K EA++ L+ K +Q
Sbjct: 4 NRAAIAAAILKWRRDERDTGSPEVQVAVMTERIRYLTSHLLKHPQDKSTKRGLTALVNDRRNNLNFLHSVDAEKARQMCAELGIRWKPPGQVWDKEAKYSAFKNTKNKKAEAKK--LVKKRAKQ 125
BLAST of mRNA_F-distichus_contig10371.330.1 vs. uniprot
Match: A0A7S0CN17_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CN17_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.620e-23 Identity = 50/110 (45.45%), Postives = 75/110 (68.18%), Query Frame = 1
Query: 7 YLNKLAVQAAQSRWREVDTDSGSSRVQVAILTEKIVYLTKHMQRNPQDFHSRRGLIAMVNSRRKQLNYYFSKEPDNCLEMCQALGIRFRPKTKVRSRDQRYAAFKNTKSK 336
Y ++ + A + WR D D GS VQVA +TE+I YLT+H++ +P+DF ++RGL+A+VN RRK LNY +SK P+ E+ ALG+R +P +V+SR ++Y A+ K K
Sbjct: 93 YAHQQRLIATRKEWRTSDIDCGSPDVQVAGMTERITYLTRHLKEHPKDFSTKRGLLALVNKRRKLLNYLYSKNPERYAELVAALGVRHKPVGRVQSRSEKYGAYPQQKPK 202
BLAST of mRNA_F-distichus_contig10371.330.1 vs. uniprot
Match: A0A7S1C329_9STRA (30S ribosomal protein S15 n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C329_9STRA) HSP 1 Score: 100 bits (249), Expect = 4.090e-22 Identity = 47/111 (42.34%), Postives = 73/111 (65.77%), Query Frame = 1
Query: 4 AYLNKLAVQAAQSRWREVDTDSGSSRVQVAILTEKIVYLTKHMQRNPQDFHSRRGLIAMVNSRRKQLNYYFSKEPDNCLEMCQALGIRFRPKTKVRSRDQRYAAFKNTKSK 336
+Y + +++ + +W + DSGS Q+A +TE+I+YLTKHMQ+NP+DF +RRGL+A+VN RR+ LNY F D +E+ +LGIR + +V +R++ Y F K K
Sbjct: 40 SYTHSVSLDEIRKKWARAENDSGSPEFQIAGMTERIMYLTKHMQQNPKDFSTRRGLLALVNKRRRLLNYLFRVNQDKYVEIIASLGIRHKAPGRVMTREEVYGRFSQRKKK 150
BLAST of mRNA_F-distichus_contig10371.330.1 vs. uniprot
Match: A0A7S1XRX6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRX6_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 7.540e-20 Identity = 47/108 (43.52%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 7 YLNKLAVQAAQSRWREVDTDSGSSRVQVAILTEKIVYLTKHMQRNPQDFHSRRGLIAMVNSRRKQLNYYFSKEPDNCLEMCQALGIRFRPKTKVRSRDQRYAAFKNTK 330
+ NK A+ AA ++++ + D+GS+ Q+A L+ +I Y+T+H +R+P+D HSRRGLI MVN RR+ LNY +P+ + LGIRF+ ++ +R +RYAAFK K
Sbjct: 107 WSNKQAINAATEKFKKHEKDTGSAEFQIAKLSARITYMTEHAKRHPKDHHSRRGLITMVNKRRRLLNYLNKTDPEAVERITSELGIRFKAAGRIMTRAERYAAFKPRK 214
BLAST of mRNA_F-distichus_contig10371.330.1 vs. uniprot
Match: A0A7S2PJX5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PJX5_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 3.110e-19 Identity = 46/108 (42.59%), Postives = 72/108 (66.67%), Query Frame = 1
Query: 7 YLNKLAVQAAQSRWREVDTDSGSSRVQVAILTEKIVYLTKHMQRNPQDFHSRRGLIAMVNSRRKQLNYYFSKEPDNCLEMCQALGIRFRPKTKVRSRDQRYAAFKNTK 330
+ +L + + ++R DTD+GS QVA +TE+I YLTKH+Q NP+DF +RRGL+A+VN RR+ LNY F ++ + + +LGIR + +V SR ++YA + + K
Sbjct: 104 FTYQLKLAEVREQFRRHDTDTGSPEYQVASMTERISYLTKHLQANPKDFSTRRGLVALVNKRRRMLNYLFKEDVERYKTLVDSLGIRHKAPGRVMSRAEKYAKYASKK 211
BLAST of mRNA_F-distichus_contig10371.330.1 vs. uniprot
Match: A0A7R9ZK55_9STRA (30S ribosomal protein S15 n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZK55_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 5.280e-19 Identity = 44/109 (40.37%), Postives = 70/109 (64.22%), Query Frame = 1
Query: 7 YLNKLAVQAAQSRWREVDTDSGSSRVQVAILTEKIVYLTKHMQRNPQDFHSRRGLIAMVNSRRKQLNYYFSKEPDNCLEMCQALGIRFRPKTKVRSRDQRYAAFKNTKS 333
+ ++ + +S WR + D+GS QVA +TE+I YLTKH+Q+NP+D+ +RRGL+A+VN RR+ LNY ++ ++ +LGIR + +V SR+ +Y F KS
Sbjct: 69 FTSQQRMDELRSTWRRSEKDTGSPEFQVAGMTERISYLTKHLQQNPKDYSTRRGLVALVNKRRRLLNYLIREDEQKYADIISSLGIRHKAPGRVESREDKYGRFNKQKS 177 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10371.330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10371.330.1 >prot_F-distichus_contig10371.330.1 ID=prot_F-distichus_contig10371.330.1|Name=mRNA_F-distichus_contig10371.330.1|organism=Fucus distichus monoicous|type=polypeptide|length=105bp MQRNPQDFHSRRGLIAMVNSRRKQLNYYFSKEPDNCLEMCQALGIRFRPKback to top mRNA from alignment at F-distichus_contig10371:6970..9688- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10371.330.1 ID=mRNA_F-distichus_contig10371.330.1|Name=mRNA_F-distichus_contig10371.330.1|organism=Fucus distichus monoicous|type=mRNA|length=2719bp|location=Sequence derived from alignment at F-distichus_contig10371:6970..9688- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10371:6970..9688- >mRNA_F-distichus_contig10371.330.1 ID=mRNA_F-distichus_contig10371.330.1|Name=mRNA_F-distichus_contig10371.330.1|organism=Fucus distichus monoicous|type=CDS|length=630bp|location=Sequence derived from alignment at F-distichus_contig10371:6970..9688- (Fucus distichus monoicous)back to top |