mRNA_F-distichus_contig103386.299.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig103386.299.1 vs. uniprot
Match: D7FHQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ3_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 2.080e-22 Identity = 41/44 (93.18%), Postives = 44/44 (100.00%), Query Frame = 1
Query: 4 ASREVWSHDEEEVLWRAQKEYGNAWNHIASLLPGRSENAVKNHW 135
ASREVWSHDEEEVLWRAQKEYGNAW++I+SLLPGRSENAVKNHW
Sbjct: 61 ASREVWSHDEEEVLWRAQKEYGNAWSYISSLLPGRSENAVKNHW 104
BLAST of mRNA_F-distichus_contig103386.299.1 vs. uniprot
Match: A0A6H5L686_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L686_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 6.260e-22 Identity = 42/44 (95.45%), Postives = 44/44 (100.00%), Query Frame = 1
Query: 4 ASREVWSHDEEEVLWRAQKEYGNAWNHIASLLPGRSENAVKNHW 135
ASREVWSHDEEEVLWRAQKEYGNAWN+I+SLLPGRSENAVKNHW
Sbjct: 617 ASREVWSHDEEEVLWRAQKEYGNAWNYISSLLPGRSENAVKNHW 660
BLAST of mRNA_F-distichus_contig103386.299.1 vs. uniprot
Match: F0XZ12_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ12_AURAN) HSP 1 Score: 61.2 bits (147), Expect = 7.830e-11 Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 10 REVWSHDEEEVLWRAQKEYGNAWNHIASLLPGRSENAVKNHW 135
RE WS EE V++ AQ+ GN W IA LLPGR++NA+KNHW
Sbjct: 72 REPWSEHEENVIYEAQQRLGNKWAEIAKLLPGRTDNAIKNHW 113
BLAST of mRNA_F-distichus_contig103386.299.1 vs. uniprot
Match: D2UY60_NAEGR (Predicted protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UY60_NAEGR) HSP 1 Score: 60.5 bits (145), Expect = 1.340e-10 Identity = 21/39 (53.85%), Postives = 32/39 (82.05%), Query Frame = 1
Query: 19 WSHDEEEVLWRAQKEYGNAWNHIASLLPGRSENAVKNHW 135
W+ +E+ ++++A K+YGN W IA LLPGR++NA+KNHW
Sbjct: 60 WTEEEDRIIYQAHKDYGNKWAQIAKLLPGRTDNAIKNHW 98
BLAST of mRNA_F-distichus_contig103386.299.1 vs. uniprot
Match: F0Y4P7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4P7_AURAN) HSP 1 Score: 60.5 bits (145), Expect = 2.080e-10 Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 1
Query: 10 REVWSHDEEEVLWRAQKEYGNAWNHIASLLPGRSENAVKNHW 135
RE WS EE V++ AQ GN W IA LLPGR++NA+KNHW
Sbjct: 83 REPWSEGEESVIYEAQHRLGNKWAEIAKLLPGRTDNAIKNHW 124
BLAST of mRNA_F-distichus_contig103386.299.1 vs. uniprot
Match: D8QZP1_SELML (Uncharacterized protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QZP1_SELML) HSP 1 Score: 58.5 bits (140), Expect = 2.120e-10 Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 1
Query: 10 REVWSHDEEEVLWRAQKEYGNAWNHIASLLPGRSENAVKNHW 135
R++W DEE++L A GN W IA L+PGR+ENA+KNHW
Sbjct: 17 RDIWREDEEQLLVSAHNRLGNKWADIAKLIPGRTENAIKNHW 58
BLAST of mRNA_F-distichus_contig103386.299.1 vs. uniprot
Match: A0A835YW24_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW24_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.400e-10 Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 10 REVWSHDEEEVLWRAQKEYGNAWNHIASLLPGRSENAVKNHW 135
++ W+ +EEEVL +A +GN W IA LLPGR++NA+KNHW
Sbjct: 58 KDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHW 99
BLAST of mRNA_F-distichus_contig103386.299.1 vs. uniprot
Match: UPI00083C7032 (myb-related protein B isoform X2 n=2 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C7032) HSP 1 Score: 62.0 bits (149), Expect = 5.220e-10 Identity = 23/42 (54.76%), Postives = 33/42 (78.57%), Query Frame = 1
Query: 10 REVWSHDEEEVLWRAQKEYGNAWNHIASLLPGRSENAVKNHW 135
+ W+ E++V++RA KE+GN W IA LLPGR++NA+KNHW
Sbjct: 151 KSAWTEQEDDVIYRAHKEWGNQWAKIAKLLPGRTDNAIKNHW 192
BLAST of mRNA_F-distichus_contig103386.299.1 vs. uniprot
Match: G0R0C8_ICHMG (Myb-like DNA-binding domain protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0R0C8_ICHMG) HSP 1 Score: 60.5 bits (145), Expect = 6.320e-10 Identity = 23/45 (51.11%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 1 QASREVWSHDEEEVLWRAQKEYGNAWNHIASLLPGRSENAVKNHW 135
Q ++E W+ DEE ++++A KEYGN W+ IA LPGR++N++KNH+
Sbjct: 59 QINKEQWAADEEMIIFKAHKEYGNKWSEIAKYLPGRTDNSIKNHF 103
BLAST of mRNA_F-distichus_contig103386.299.1 vs. uniprot
Match: A0A7S3ZTY8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTY8_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 6.970e-10 Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 10 REVWSHDEEEVLWRAQKEYGNAWNHIASLLPGRSENAVKNHW 135
RE WS EE V++ AQ+ GN W IA LLPGR++NA+KNHW
Sbjct: 95 REPWSEQEENVIYEAQQRLGNKWAEIAKLLPGRTDNAIKNHW 136 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig103386.299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig103386.299.1 >prot_F-distichus_contig103386.299.1 ID=prot_F-distichus_contig103386.299.1|Name=mRNA_F-distichus_contig103386.299.1|organism=Fucus distichus monoicous|type=polypeptide|length=46bp QASREVWSHDEEEVLWRAQKEYGNAWNHIASLLPGRSENAVKNHW*back to top mRNA from alignment at F-distichus_contig103386:1654..1791+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig103386.299.1 ID=mRNA_F-distichus_contig103386.299.1|Name=mRNA_F-distichus_contig103386.299.1|organism=Fucus distichus monoicous|type=mRNA|length=138bp|location=Sequence derived from alignment at F-distichus_contig103386:1654..1791+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig103386:1654..1791+ >mRNA_F-distichus_contig103386.299.1 ID=mRNA_F-distichus_contig103386.299.1|Name=mRNA_F-distichus_contig103386.299.1|organism=Fucus distichus monoicous|type=CDS|length=276bp|location=Sequence derived from alignment at F-distichus_contig103386:1654..1791+ (Fucus distichus monoicous)back to top |