mRNA_F-distichus_contig10333.294.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10333.294.1 vs. uniprot
Match: D7G5P0_ECTSI (SHSP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5P0_ECTSI) HSP 1 Score: 108 bits (271), Expect = 4.620e-26 Identity = 73/163 (44.79%), Postives = 95/163 (58.28%), Query Frame = 1
Query: 25 VARELTESRFGTLTRTPRHEVFETAESVTLNIDLPGCKKQDVDAQISEDDGAKTLRITAVRRRPHNKDN--RETVDGGDGGGR------------------NEGS------GYADAGEEKFELSFLLGEGVDVSRVRGKMEDGVLTLVLPRVPQELPAQPIDI 435
VA EL++ T R+P +EV ET ++ TL +DLPGCKK+DVDAQ+SED G KTL ITAVR++P D R D G +E + + EE F+LSF +GE +DVS +RG +EDGVLTLVLP++ E PA+PIDI
Sbjct: 91 VACELSDPT--TEARSPPYEVLETPDAATLIVDLPGCKKEDVDAQVSEDSGTKTLTITAVRKKPRQADGDARSPSSPPDTSGSXXXXXXXXXXXXXXXXAPHEAAKDTPEPSLSSFSEESFKLSFRVGEDIDVSVIRGGLEDGVLTLVLPKLAPEPPAEPIDI 251
BLAST of mRNA_F-distichus_contig10333.294.1 vs. uniprot
Match: A0A1L9B4K1_9DELT (SHSP domain-containing protein n=3 Tax=Cystobacter TaxID=42 RepID=A0A1L9B4K1_9DELT) HSP 1 Score: 62.0 bits (149), Expect = 2.390e-9 Identity = 41/133 (30.83%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 1 IIILRHDTVARELTESRFGTLTRTPRHEVFETAESVTLNIDLPGCKKQDVDAQISEDDGAKTLRITAVRRRPHNKDNRETVDGGDGGGRNEGSGYADAGEEKFELSFLLGEGVDVSRVRGKMEDGVLTLVLPR 399
+++ D R+L G+ P +++ETAE +TL +DLPG + ++ ++ D TL + + R+RP + ++EG+ + F SF+L VD SRV + E+GVLTL LPR
Sbjct: 20 LVLREFDQFFRDLPVRPSGSREFAPAADIYETAEGITLQVDLPGHDARSIEVKVEND----TLTLKSERKRPESP-------------KDEGTRRLERNFGVFTRSFVLPRTVDPSRVEARYENGVLTLSLPR 135
BLAST of mRNA_F-distichus_contig10333.294.1 vs. uniprot
Match: A0A250IIS1_9DELT (Heat-shock protein n=2 Tax=Archangiaceae TaxID=39 RepID=A0A250IIS1_9DELT) HSP 1 Score: 61.6 bits (148), Expect = 3.560e-9 Identity = 40/133 (30.08%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 1 IIILRHDTVARELTESRFGTLTRTPRHEVFETAESVTLNIDLPGCKKQDVDAQISEDDGAKTLRITAVRRRPHNKDNRETVDGGDGGGRNEGSGYADAGEEKFELSFLLGEGVDVSRVRGKMEDGVLTLVLPR 399
+++ D + R+L+ + G P ++ ETAE +TL +DLPG + ++ ++ D TL + + R+R ++ +NEG+ + + SF L VD SRV + E+GVLTL LPR
Sbjct: 21 LVMREFDQIFRDLSVRQTGAREFVPAADIHETAEGITLQVDLPGHDAKSIEVRVEND----TLTLKSERKRDPSESQ-----------KNEGTRRLERSFGVYTRSFALPRTVDASRVEARYENGVLTLTLPR 138
BLAST of mRNA_F-distichus_contig10333.294.1 vs. uniprot
Match: A0A0B5E4X9_9RHOB (Heat shock protein Hsp20 n=19 Tax=root TaxID=1 RepID=A0A0B5E4X9_9RHOB) HSP 1 Score: 54.3 bits (129), Expect = 1.430e-6 Identity = 36/133 (27.07%), Postives = 60/133 (45.11%), Query Frame = 1
Query: 19 DTVARELTESRFGTLTRTPRHEVFETAESVTLNIDLPGCKKQDVDAQISEDDGAKTLRITAVRRRPHNKDNRETVDGGDGGGRNEGSGYADAGEEKFELSFLLGEGVDVSRVRGKMEDGVLTLVLPRVPQELP 417
D E E+ G P ++ ETA+ VTL +++PG +DVD + + R+ +R + H + YA+ GE FE +F + + D ++ ++ +GVLTL LPR + P
Sbjct: 10 DKTPAETPETTTGRRIYRPLTDIVETADGVTLTLEMPGVAAEDVDITLEK-------RVLTIRGKVHATQPEKLQ-----------LAYAEYGEGDFERAFTMSDDFDPDKIGAQVSNGVLTLTLPRAAEAQP 124
BLAST of mRNA_F-distichus_contig10333.294.1 vs. uniprot
Match: A0A0T5NMP4_9RHOB (Heat-shock protein Hsp20 n=1 Tax=Roseovarius atlanticus TaxID=1641875 RepID=A0A0T5NMP4_9RHOB) HSP 1 Score: 54.3 bits (129), Expect = 1.430e-6 Identity = 36/117 (30.77%), Postives = 57/117 (48.72%), Query Frame = 1
Query: 73 PRHEVFETAESVTLNIDLPGCKKQDVDAQISEDDGAKTLRITAVRRR--PHNKDNRETVDGGDGGGRNEGSGYADAGEEKFELSFLLGEGVDVSRVRGKMEDGVLTLVLPRVPQELP 417
P ++ ETAE VTLN+++PG DVD + + R+ +R + P + + YA+ GE FE SF LG+ D ++ ++ GVLT+ LPR+ + P
Sbjct: 28 PLADIVETAEGVTLNLEMPGVAADDVDITLEK-------RVLTIRGKVQPTAPEALQLA-------------YAEYGEGDFERSFTLGDDFDPDKIGAEVSHGVLTVTLPRLAEASP 124
BLAST of mRNA_F-distichus_contig10333.294.1 vs. uniprot
Match: A0A1Q3H9J3_9DELT (SHSP domain-containing protein n=4 Tax=Archangium TaxID=47 RepID=A0A1Q3H9J3_9DELT) HSP 1 Score: 54.3 bits (129), Expect = 1.980e-6 Identity = 42/136 (30.88%), Postives = 66/136 (48.53%), Query Frame = 1
Query: 19 DTVARELTESRFGTLTRTPRHEVFETAESVTLNIDLPGCKKQDVDAQISEDDGAKTLRITAVRR---RPHNKDNRETVDGGDGGGRNEGSGYADAGEEKFELSFLLGEGVDVSRVRGKMEDGVLTLVLPRVPQELP 417
D + REL+ + P +++ETAE +TL +DLPG + ++ ++ D TL I + R+ RP KD+ ++ G + SF++ VD SRV + E+GVLTL LPR + P
Sbjct: 26 DQLFRELSVRQGNARELVPPADIYETAEGITLQVDLPGHDAKSIEVKVEND----TLTIKSERKVAERPE-KDSARRLERSFG---------------VYARSFVVPRTVDASRVEARYENGVLTLTLPRREESRP 141
BLAST of mRNA_F-distichus_contig10333.294.1 vs. uniprot
Match: A0A0B2RPZ0_GLYSO (18.2 kDa class I heat shock protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=A0A0B2RPZ0_GLYSO) HSP 1 Score: 52.8 bits (125), Expect = 6.800e-6 Identity = 37/109 (33.94%), Postives = 55/109 (50.46%), Query Frame = 1
Query: 91 ETAESVTLNIDLPGCKKQDVDAQISEDDGAKTLRITAVRRRPHNKDNRETVDGGDGGGRNEGSGYADAGEEKFELSFLLGEGVDVSRVRGKMEDGVLTLVLPRVPQELP 417
ET ES DLPG KK++V ++ E + L I+ R +V+ D +NE + G KF+ F L E V V+ ME+GVLT+++P+VP + P
Sbjct: 43 ETPESHVFKADLPGLKKEEVKVEVEE---GRVLNISGER----------SVEKED---KNEKWHRVERGRGKFQRKFWLPEDAKVDEVKASMENGVLTVIVPKVPDKKP 135
BLAST of mRNA_F-distichus_contig10333.294.1 vs. uniprot
Match: A0A2T4V3Q7_VITXG (SHSP domain-containing protein n=1 Tax=Vitiosangium sp. (strain GDMCC 1.1324) TaxID=2138576 RepID=A0A2T4V3Q7_VITXG) HSP 1 Score: 52.8 bits (125), Expect = 7.400e-6 Identity = 42/130 (32.31%), Postives = 63/130 (48.46%), Query Frame = 1
Query: 19 DTVARELTESRFGTLTRTPRHEVFETAESVTLNIDLPGCKKQDVDAQISEDDGAKTLRITAVRRRPHNKDNRETVDGGDGGGRNEGSGYADAGEEKFEL---SFLLGEGVDVSRVRGKMEDGVLTLVLPR 399
D + R+L+ + + P +++ETAE +TL +DLPG + ++ ++ D TL + + R K R DG A E F + SF+L VD SRV + E+GVLTL LPR
Sbjct: 26 DQLFRDLSARQGSSRELVPPADIYETAEGITLQVDLPGHDPKAIEVKVEHD----TLTLKSER-----KVERSDKDG------------ARRLERSFGVYTRSFVLPRTVDASRVEARYENGVLTLTLPR 134
BLAST of mRNA_F-distichus_contig10333.294.1 vs. uniprot
Match: A0A5K1CZB9_9MAGN (Uncharacterized protein (Fragment) n=2 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1CZB9_9MAGN) HSP 1 Score: 52.8 bits (125), Expect = 8.160e-6 Identity = 36/109 (33.03%), Postives = 54/109 (49.54%), Query Frame = 1
Query: 91 ETAESVTLNIDLPGCKKQDVDAQISEDDGAKTLRITAVRRRPHNKDNRETVDGGDGGGRNEGSGYADAGEEKFELSFLLGEGVDVSRVRGKMEDGVLTLVLPRVPQELP 417
ET ++ +DLPG KK++V ++ E K L+I+ R R + +NE + KF F L E V V +V+ MEDGVLT+ +P+VP+ P
Sbjct: 55 ETPDAHVFKVDLPGLKKEEVKVELEE---GKVLKISGERSRESEE-------------KNEKWHRVERSSGKFLRRFRLPENVMVDQVKAAMEDGVLTVTVPKVPEPKP 147
BLAST of mRNA_F-distichus_contig10333.294.1 vs. uniprot
Match: A0A6B3SR78_9BURK (Hsp20/alpha crystallin family protein n=1 Tax=Noviherbaspirillum galbum TaxID=2709383 RepID=A0A6B3SR78_9BURK) HSP 1 Score: 52.8 bits (125), Expect = 8.290e-6 Identity = 39/113 (34.51%), Postives = 54/113 (47.79%), Query Frame = 1
Query: 64 TRTPRHEVFETAESVTLNIDLPGCKKQDVDAQISEDDGAKTLRITA-VRRRPHNKDNRETVDGGDGGGRNEGSGYADAGEEKFELSFLLGEGVDVSRVRGKMEDGVLTLVLPR 399
T +PR V ET ++ L +LPG KK+DV + + + L I A V+R K+ V YA+ KF SF L VD S ++E+GVLTL LP+
Sbjct: 49 TVSPRINVVETDKAFELQAELPGVKKEDVAINVQD----RRLTIEAEVKRTEEKKEGENLV-------------YAERASRKFARSFALPAEVDESAAEARLENGVLTLTLPK 144 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10333.294.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10333.294.1 >prot_F-distichus_contig10333.294.1 ID=prot_F-distichus_contig10333.294.1|Name=mRNA_F-distichus_contig10333.294.1|organism=Fucus distichus monoicous|type=polypeptide|length=145bp IIILRHDTVARELTESRFGTLTRTPRHEVFETAESVTLNIDLPGCKKQDVback to top mRNA from alignment at F-distichus_contig10333:7715..8149- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10333.294.1 ID=mRNA_F-distichus_contig10333.294.1|Name=mRNA_F-distichus_contig10333.294.1|organism=Fucus distichus monoicous|type=mRNA|length=435bp|location=Sequence derived from alignment at F-distichus_contig10333:7715..8149- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10333:7715..8149- >mRNA_F-distichus_contig10333.294.1 ID=mRNA_F-distichus_contig10333.294.1|Name=mRNA_F-distichus_contig10333.294.1|organism=Fucus distichus monoicous|type=CDS|length=870bp|location=Sequence derived from alignment at F-distichus_contig10333:7715..8149- (Fucus distichus monoicous)back to top |