mRNA_F-distichus_contig10328.287.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10328.287.1 vs. uniprot
Match: D8LQK9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQK9_ECTSI) HSP 1 Score: 803 bits (2074), Expect = 9.100e-270 Identity = 546/1037 (52.65%), Postives = 669/1037 (64.51%), Query Frame = 1
Query: 1 RVVSGEPLAKPAVISLCCGVARRVIDKSGPGVAESHAGRVAEAVVTRLGRGVSGDDAQTVECWVECARLLSSVAGMSASLLLSCKTLGTLEDMIERLGAKHSSMLRPCCEALERVSQSEAGRAAFEERGTGGILLATIRDFPDALDEGSDMALASALKVVERIFTDKSPEACALSLRADTEEQSSGDPHQPTPSDYASCVETLLAVAEATPEVPGAAAANCLWWLSGASDVAPRRALTAIMLAGAEGIVKGVDEIDHQDVRKEGMEEGEDAIDQL--QPEVWSWFPRSCDED---EVSGAPVSP-RPLQAARFLAALCVSKPGLRSLEDGVRRNCPR-VVDALVKMCGSDDAVLAGACLRVVERLARAGLGEQIFLEAGALKQATQAGMRFEAAEDGRLLNDSPIVEEVLNVDDARTCAIAAALGAVASLAEAAGEGERSMVDDAFHLSVRCLRTIGEFSGRPAAATAKSALDVIAIRLSGSDRPKGPAASRRGTSHVPSITDGDGDRISPNKSDEASDQWASGMPNRSEIVAV---VDEPMEVLGDASAILAVMRAHPMDTRVQQAGWKSLIAMDTGRGYVETLFAPGADGKRSRRQMLRDALERHGGDSLVAGQVAEILDGLALLVDS-DGE-NSVTASVSDAQGDESPRWPNGEIDSGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADAVADDESG------RGDGHSDGGGG--RGDNXXXXXXXXXGA--------PVERAESVDERA-PEDVMLAISLRGQEAL--GDEGARSD-------VLSVDGESTDGNGSIVGTRIVRALFSEDVSNGGGQEVGTCDGAETYRYVTVNTFLQGSFLSSSLFRRPLPVALR-SWNELERLHKDVMGRSELLGGDSAVRVAAMFDPDALKENMRALLEGADGAQAKNAIVDSSLAMVDALTAATGALAASQREVQRYLQLSRDLRETSTVRDKLDAMQWTMDTLKATVILFTPHTGHLITKDLGICKTMEAASKLFK 2994
RV+SGEP+AKP+V+SLCC A V+DK G GV+ S G + EA+V RL RGVSGDDAQTVEC VECARL+SS+AG +ASLL+ LG +E M+E+LG HSS++RPCCEALERVS++E GRA FEERGTGG+LLATIRDFP+AL+EGSD+ALASALKVVERIFT KSPEACALSLRA +EE+S DPH+PT SDY +CVET+L V EATPE PGAAAA CLWWLSGAS AP RAL+AI+ A A + G + + E E A QL +VWSWF R + + G V P RP++ ARFLAALC+ +PGL LE V R PR V +ALV +C S D +LA AC R++ERLA+ G G Q+F++AGAL A AG FE ED V+DA AIAAALGAVA+LA+A G+ R +VDDAF LSVRCL +GE+SGRPAAA AKSALDVI +RL+ DRPKG A R G + + G + ++ +D+ SG P +++ VD PME+L DA AILAVM+AH D RVQQ+GW+SLIAMDTGRG VE + DG +SRRQMLRD LERHGGDSLVAGQVA+IL+GL L DS DG+ +S+TAS+SDA G+ESPR P+ ++ G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D + G +GD D G GD GA P+ AE E PEDV++ I L G + L G SD V +V ++ G GS + R+LF SNG + + G +T S +S + + LR SW +LE LH D++GRS++LGG+SA VAAM +P LKE + ALLE + +++A +SLA+V ALTAATGAL SQ+EVQRYL +SRDLR TST D +AMQWTMD+LK TVILFTPHT +TK LG+CK M++A KLFK
Sbjct: 66 RVISGEPMAKPSVLSLCCRTAVWVVDKFGSGVSHSQGGGLVEALVGRLDRGVSGDDAQTVECQVECARLMSSLAGQAASLLIDGGALGAIECMLEQLGGNHSSIMRPCCEALERVSRTEEGRATFEERGTGGVLLATIRDFPEALEEGSDVALASALKVVERIFTGKSPEACALSLRAKSEEESCDDPHRPTFSDYDNCVETVLTVVEATPEAPGAAAATCLWWLSGASSKAPDRALSAILAAAA--VADGTEATNE-------AREAEKAAAQLLVSADVWSWFSRGDGGEGDVQEEGENVPPARPVEGARFLAALCLCRPGLECLEAAVERESPRRVAEALVTLCESADPLLARACFRIIERLAKGGTGPQVFVDAGALAAAAVAGALFEVEEDAE------------TVEDAEAHAIAAALGAVATLADAGGKDARPVVDDAFQLSVRCLARVGEYSGRPAAAAAKSALDVITVRLTRPDRPKGAAGVRGGGAAAGPAPEAGGAVVENDEGGGDTDKAVSGAPGDAKVEDAAEDVDTPMEILKDAGAILAVMKAHSTDARVQQSGWRSLIAMDTGRGDVEKFWTGVGDGPQSRRQMLRDCLERHGGDSLVAGQVADILEGLVLQGDSADGDGSSLTASLSDAPGEESPRLPSDHEEAEGGDEDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDNIKHSTDAAHQQEVEQVVNGEDEDKDGGLEVPGDKGDVPEDKGAEVEGGDEATAVAEASEGAGNADGGSDPLGDAEGKSETLLPEDVLIEIGLIGTKTLEGGGSSGSSDSSRTASVVAAVAEDAVTGEGSTTRPNVARSLFG---SNGHANDKNSAAG-DTVEAEKPEAKADCSLNASVVVPSKEELKLRRSWAKLETLHSDIVGRSQILGGESAPMVAAMAEPSVLKERVSALLEETESGDSRDAFAAASLALVGALTAATGALNNSQKEVQRYLAMSRDLRVTSTWTDISEAMQWTMDSLKGTVILFTPHTAGGLTKALGLCKNMDSALKLFK 1077 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10328.287.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10328.287.1 >prot_F-distichus_contig10328.287.1 ID=prot_F-distichus_contig10328.287.1|Name=mRNA_F-distichus_contig10328.287.1|organism=Fucus distichus monoicous|type=polypeptide|length=1006bp RVVSGEPLAKPAVISLCCGVARRVIDKSGPGVAESHAGRVAEAVVTRLGRback to top mRNA from alignment at F-distichus_contig10328:801..10729+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10328.287.1 ID=mRNA_F-distichus_contig10328.287.1|Name=mRNA_F-distichus_contig10328.287.1|organism=Fucus distichus monoicous|type=mRNA|length=9929bp|location=Sequence derived from alignment at F-distichus_contig10328:801..10729+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10328:801..10729+ >mRNA_F-distichus_contig10328.287.1 ID=mRNA_F-distichus_contig10328.287.1|Name=mRNA_F-distichus_contig10328.287.1|organism=Fucus distichus monoicous|type=CDS|length=6036bp|location=Sequence derived from alignment at F-distichus_contig10328:801..10729+ (Fucus distichus monoicous)back to top |