mRNA_F-distichus_contig102937.260.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig102937.260.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI) HSP 1 Score: 209 bits (532), Expect = 6.990e-58 Identity = 144/336 (42.86%), Postives = 160/336 (47.62%), Query Frame = 1
Query: 16 DEFDFSVSDLAVDLRDGVRLTRLVELVTGEWGLASALRVPAVSRLQVRDVKCCLLGVECGRARSRELAQGMNPLDGVFCSRSCPAVTSRAQKISNMGKALERLERDGAMITASTAAAP--------ITPQEIVDGDREATLRLLWCIIARYSLTSLLDREALVREAEAVVSAADKWRRA-------------------------------------------------------------RLHARWELPSLMMADAAALRGCWGGGGXGESGEGREASNGE-----------LLSALLAWCQAVCHGYGVPVTNFTTSFADGRALCLLMHYYHPWV 783
DEFDF VS+LAVDLRDGVRLTRL+E+VTGEWGLA LRVPAVSRLQ KI N +ALERLE D IT + ++ +TP+EIVDGDR ATLRLLW II RYSL++LLDR+AL REAE VVSAA KWRRA R A E P L + D AA+ W E G LLSALL WCQAVCHGYGVPV NFTTSFADGRALCLL+HYYHP +
Sbjct: 543 DEFDFRVSNLAVDLRDGVRLTRLMEVVTGEWGLAIGLRVPAVSRLQ---------------------------------------------KIFNTKRALERLEADAGPITLGSNSSXXXXXXXXAVTPKEIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAEGVVSAARKWRRAGFSPARPEXXXXXXXXXXXXXXXXXXXXXXXXXXVGEATVVDFGVMSPGSXXXXXAPPAGGRAVAGEEHPPLELPDVAAMVEGW------EEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHPRI 827
BLAST of mRNA_F-distichus_contig102937.260.1 vs. uniprot
Match: A0A6H5KRH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH5_9PHAE) HSP 1 Score: 204 bits (520), Expect = 2.820e-56 Identity = 135/304 (44.41%), Postives = 155/304 (50.99%), Query Frame = 1
Query: 16 DEFDFSVSDLAVDLRDGVRLTRLVELVTGEWGLASALRVPAVSRLQVRDVKCCLLGVECGRARSRELAQGMNPLDGVFCSRSCPAVTSRAQKISNMGKALERLERDGAMITASTAAAPITPQEIVDGDREATLRLLWCIIARYSLTSLLDREALVREAEAVVSAADKWRRA-------------------------------------RLHARWELPSLMMADAAALRGCWGGGGXGESGEGREASNGE-----------LLSALLAWCQAVCHGYGVPVTNFTTSFADGRALCLLMHYYHPWV 783
DEFDF VS+LAVDLRDGVRLTRL+E+VTGEWGLA LRVPAVSRLQV S P + S + G++ GA ++P++IVDGDR ATLRLLW II RYSL++LLDR+AL REA+ V+SAA KWRRA R A E P L + D AA+ W E G LLSALL WCQAVCHGYGVPV NFTTSFADGRALCLL+HYYHP +
Sbjct: 430 DEFDFHVSNLAVDLRDGVRLTRLMEVVTGEWGLAIGLRVPAVSRLQV----------------------------------SFPGILSYVALMFKRGESCGSGGGGGA----------VSPKDIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAQGVISAARKWRRAGFSPARPERAMGKMDAIDFGVMSPGSPASPVAPPAEGRAVAGDEHPPLELPDVAAMVEGW------EEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHPRI 683
BLAST of mRNA_F-distichus_contig102937.260.1 vs. uniprot
Match: A0A835Z978_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z978_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.050e-39 Identity = 105/263 (39.92%), Postives = 131/263 (49.81%), Query Frame = 1
Query: 4 RRKADEFDFSVSDLAVDLRDGVRLTRLVELVTGEWG-----LASALRVPAVSRLQVRDVKCCLLGVECGRARSRELAQGMNPLDGVFCSRSCPAVTSRAQKISNMGKALERLERDGAMITASTAAAPITPQEIVDGDREATLRLLWCIIARYSLTSLLDREALVREAEAVVSAADKWRRARLHARWELPSLMMADAAALRGCWGGGGXGESGEGREASNGELLSALLAWCQAVCHGYGVPVTNFTTSFADGRALCLLMHYYHP 777
+R DE+DF+V+ L DLRDGVRL RL EL+T G L S LRVP V R QK+ N G A+ RL DGA+ T ++IVDG + T+ LLW +I+RY L+SL+D +AL RE AVV K ++ L + P L + A A+ G SG G +L AL W QAVCHGYGVP+ NFTTSFADGRALCLL+H+YHP
Sbjct: 608 QRYVDEYDFTVTSLKTDLRDGVRLVRLAELLTQGTGKPVGQLTSQLRVPPVDR---------------------------------------------TQKMHNTGLAVARLVEDGAL-PLGTHEIGEAAKDIVDGHQGRTIGLLWAVISRYKLSSLVDVQALTREITAVVRVQRKRQQLGLPTLHDGPRLCLPSAEAI---------GLSGHG------DLQQALAVWAQAVCHGYGVPIHNFTTSFADGRALCLLVHHYHP 809
BLAST of mRNA_F-distichus_contig102937.260.1 vs. uniprot
Match: A0A2R5G7A7_9STRA (Abnormal spindle-like microcephaly-associated protein-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7A7_9STRA) HSP 1 Score: 138 bits (347), Expect = 3.670e-33 Identity = 102/283 (36.04%), Postives = 135/283 (47.70%), Query Frame = 1
Query: 1 ERRKADEFDFSVSDLAVDLRDGVRLTRLVELVTG--EWGLASALRVPAVSRLQVRDVKCCLLGVECGRARSRELAQGMNPLDGVFCSRSCPAVTSRAQKISNMGKALERLERDGAMITAS--TAAA------PITPQ-----EIVDGDREATLRLLWCIIARYSLTSLLDREALVREAEAVVSAADKWRRARLHARWELPSLMMADAAALRGCWGGGGXGESGEGREASNGEL-LSALLAWCQAVCHGYGVPVTNFTTSFADGRALCLLMHYYHPWVSERANI 801
E+RK DEFDF V++LAVDLRDG+RL+R VEL+T + L+ +R PAVSRLQ K+ N AL+ LER G + S TAA P+ P+ +IVDGDR TL LLW +I ++ L +L EAL E V + K + EL A RG + E +E + E + LL WCQ++C +G+ V NFTTS A GRALCLL+H+YHP + R +I
Sbjct: 542 EQRKLDEFDFRVTNLAVDLRDGLRLSRAVELLTDNRDRTLSELMRAPAVSRLQ---------------------------------------------KLHNTDVALKELERQGVSLVFSHNTAAGLARAQMPVKPETISNRDIVDGDRRKTLALLWKMILKWKLDGVLPEEALCDETSRVRTMHGKTASRIMAKSEELAKHHKMQVRAQRG------EATAEENQETEHTEAAMDVLLRWCQSICAHHGMRVANFTTSMASGRALCLLIHHYHPGLLPRESI 773
BLAST of mRNA_F-distichus_contig102937.260.1 vs. uniprot
Match: UPI001EE6194E (LOW QUALITY PROTEIN: abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE6194E) HSP 1 Score: 138 bits (347), Expect = 3.820e-33 Identity = 94/263 (35.74%), Postives = 136/263 (51.71%), Query Frame = 1
Query: 16 DEFDFSVSDLAVDLRDGVRLTRLVELVTGEWGLASALRVPAVSRLQVRDVKCCLLGVECGRARSRELAQGMNPLDGVFCSRSCPAVTSRAQKISNMGKALERLERDGAMITASTAAAPITPQEIVDGDREATLRLLWCIIARYSLTSLLDREALVREAEAVVSAADKWRRARLHARWELPSLMMADAAALRGCWGGGGXGESGEGREASNGELLSALLAWCQAVCHGYGVPVTNFTTSFADGRALCLLMHYYHPWVSERANIH 804
DEFD++V+ L VDLRDGVRL+R++EL+TGEW L LR PAVSRLQ ++ ++ VF A+T R ++ + DG I A ++IVDG RE TL++LW +I + + L++ E L E S ++ R +++ + +L + D A R +SG G + + E L LL WC+ VC YGV V NFT SF+DGRALC L+H+YHP + + +H
Sbjct: 1865 DEFDYAVTKLGVDLRDGVRLSRVLELLTGEWNLVKCLRAPAVSRLQK-----------------------IHNIEMVF-----RALTERGLDVAKL---------DGGKIGA---------RDIVDGHREKTLKILWHLIFHFQVDVLINLEQLREET----SLLEQSLRVKVNMQ-KLLKIKQEDNLARR---------DSG-GLMSQDNERLEMLLKWCRVVCLHYGVKVENFTVSFSDGRALCCLLHHYHPGLLPLSQVH 2066
BLAST of mRNA_F-distichus_contig102937.260.1 vs. uniprot
Match: A0A8K1FN67_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FN67_PYTOL) HSP 1 Score: 137 bits (345), Expect = 6.720e-33 Identity = 98/267 (36.70%), Postives = 136/267 (50.94%), Query Frame = 1
Query: 16 DEFDFSVSDLAVDLRDGVRLTRLVELVTGEWG--LASALRVPAVSRLQ-VRDVKCCL--LGVECGRARSRELAQGMNPLDGVFCSRSCPAVTSRAQKISNMGKALERLERDGAMITASTAAAPITPQEIVDGDREATLRLLWCIIARYSLTSLLDREALVREAEAVVSAADKWRRARLHARWELPSLMMADAAALRGCWGGGGXGESGEGREASNGELLSALLAWCQAVCHGYGVPVTNFTTSFADGRALCLLMHYYHPWVSERANI 801
DE D VS+LAVDLRDGVRL +L+E +T G L+S LRVPA+SRLQ V +V+ CL L CGR + + V S + + + M KA +VDG RE TL LLW +I+ + L SL++ L +E + V + +R + + + ++A ++ E +G +A ELL L WC+AVC Y +PVT+FT SFADGRALC L+HYYHP + R+ I
Sbjct: 642 DEVDLEVSNLAVDLRDGVRLAKLLEALTPCRGQPLSSFLRVPALSRLQKVHNVEICLHYLQETCGRDILESIRSSYSHGKSVRSSFTTLRSKQDVKILETMSKA------------------------VVDGHREKTLALLWKLISVFQLRSLINMTRLTKEVQNVKNRMS-FRASEFYESSRISQAIIARSST---------PDEENQGIDAEVSELL---LEWCRAVCANYSIPVTDFTESFADGRALCYLLHYYHPMLLGRSEI 871
BLAST of mRNA_F-distichus_contig102937.260.1 vs. uniprot
Match: UPI0006B0F883 (abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0F883) HSP 1 Score: 135 bits (341), Expect = 2.360e-32 Identity = 92/266 (34.59%), Postives = 130/266 (48.87%), Query Frame = 1
Query: 4 RRKADEFDFSVSDLAVDLRDGVRLTRLVELVTGEWGLASALRVPAVSRLQVRDVKCCLLGVECGRARSRELAQGMNPLDGVFCSRSCPAVTSRAQKISNMGKALERLERDGAMITASTAAAPITPQEIVDGDREATLRLLWCIIARYSLTSLLDREALVREAEAVVSAADKWRRARLHARWELPSLMMADAAALRGCWGGGGXGESGEGREASNGELLSALLAWCQAVCHGYGVPVTNFTTSFADGRALCLLMHYYHPWVSERANI 801
+R +EFDF+V++LAVDLR G+RL R++EL+ +W L++ +RVPA+SRLQ KI N+G L+ L G ++ S IT ++I+DG+RE TL LLW II + + L+ +E + RE + R AR + PS + A + + E E L LL WCQAVC Y +PV NFT SF+DGRALC L+H+YHP V + +I
Sbjct: 913 QRALEEFDFAVTNLAVDLRCGLRLVRVLELLLQQWTLSNQVRVPAISRLQ---------------------------------------------KIYNVGLGLQALTDSGMILDES-----ITSRDIIDGNREKTLLLLWQIIFKTQVECLIKKEKM-REEILYHQKSLSTRNQLALARLQNPSKVTEKIAQTK---------DDDENVFNMENESLDFLLKWCQAVCTQYNIPVENFTVSFSDGRALCYLIHHYHPNVLQEKDI 1118
BLAST of mRNA_F-distichus_contig102937.260.1 vs. uniprot
Match: UPI00138F9FE1 (abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138F9FE1) HSP 1 Score: 135 bits (340), Expect = 3.210e-32 Identity = 89/259 (34.36%), Postives = 120/259 (46.33%), Query Frame = 1
Query: 1 ERRKADEFDFSVSDLAVDLRDGVRLTRLVELVTGEWGLASALRVPAVSRLQVRDVKCCLLGVECGRARSRELAQGMNPLDGVFCSRSCPAVTSRAQKISNMGKALERLERDGAMITASTAAAPITPQEIVDGDREATLRLLWCIIARYSLTSLLDREALVREAEAVVSAADKWRRARLHARWELPSLMMADAAALRGCWGGGGXGESGEGREASNGELLSALLAWCQAVCHGYGVPVTNFTTSFADGRALCLLMHYYHP 777
++R DEFD++V+++A DLRDG+RLTR+VEL++ W L S LRVPA+SRLQ KI N+ L+ L+ G + + ITP+ IVDG RE TL LLW II + + LL E L E + + D L D + + G +S E L LL WC+ VC YG+ + NFT SF+DGRALC L+H+YHP
Sbjct: 762 QQRAIDEFDYAVTNIATDLRDGLRLTRVVELLSHNWRLTSTLRVPAISRLQ---------------------------------------------KIHNVEVVLKALKDHGVPVGEGEGSG-ITPRHIVDGHREKTLNLLWMIIVNFQVNILLSEEKLKEEISFLEQSLDLEH-----------CLAACDVSRIMGL--PRNKRDSLESGLYFKSARLGLLLKWCRLVCKSYGLKIDNFTVSFSDGRALCYLLHHYHP 961
BLAST of mRNA_F-distichus_contig102937.260.1 vs. uniprot
Match: A0A1S3KBD7_LINUN (abnormal spindle-like microcephaly-associated protein homolog n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KBD7_LINUN) HSP 1 Score: 134 bits (337), Expect = 8.090e-32 Identity = 93/256 (36.33%), Postives = 124/256 (48.44%), Query Frame = 1
Query: 16 DEFDFSVSDLAVDLRDGVRLTRLVELVTGEWGLASALRVPAVSRLQVRDVKCCLLGVECGRARSRELAQGMNPLDGVFCSRSCPAVTSRAQKISNMGKALERLERDGAMITASTAAAPITPQEIVDGDREATLRLLWCIIARYSLTSLLDREALVREAEAVVSAADKWRRARLHARWELPSLMMA--DAAALRGCWGGGGXGESGEGREASNGELLSALLAWCQAVCHGYGVPVTNFTTSFADGRALCLLMHYYHP 777
DEFDF+V+ L+ DLRDGVRL R+VEL+T +W L+S LRVPA+SRLQ KI N+ AL+ L G +T A I P+++VDG RE TL +LW +I + + LL+ + L E + + L + L +++ D RG G ES E LS LL WC+AVC Y + V NFT SF+DGRALC L+H+YHP
Sbjct: 1331 DEFDFAVTKLSKDLRDGVRLARIVELLTRDWSLSSLLRVPAISRLQ---------------------------------------------KIHNVEVALKALANRGLDVTTPQGGA-INPRDVVDGHREKTLAMLWRVIFNFQVDVLLNLDQLREEVDFLKKT--------LCVKTHLTAVLNYENDLGLERG-----GRRESMEPDLYFKSNGLSLLLKWCKAVCAFYNLEVENFTVSFSDGRALCYLVHHYHP 1527
BLAST of mRNA_F-distichus_contig102937.260.1 vs. uniprot
Match: UPI001B88A250 (abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88A250) HSP 1 Score: 134 bits (337), Expect = 8.120e-32 Identity = 92/256 (35.94%), Postives = 128/256 (50.00%), Query Frame = 1
Query: 16 DEFDFSVSDLAVDLRDGVRLTRLVELVTGEWGLASALRVPAVSRLQVRDVKCCLLGVECGRARSRELAQGMNPLDGVFCSRSCPAVTSRAQKISNMGKALERLERDGAMITASTAAAPITPQEIVDGDREATLRLLWCIIARYSLTSLLDREALVREAEAVVSAADKWRRARLHARWELPSLMMA--DAAALRGCWGGGGXGESGEGREASNGELLSALLAWCQAVCHGYGVPVTNFTTSFADGRALCLLMHYYHP 777
DEFD+SV+ L VDLRDG RL R+ E +TGEW L LR PA+SRLQ M+ ++ VF +K+++ G + ++E G I+A +IVDG RE TL+LLW +I + + L+++E L E K+ L + + L+ D++A R +SGE E LS LL WC+ VC YGV + NFT SF+DGRALC L+H+YHP
Sbjct: 1464 DEFDYSVTKLGVDLRDGFRLMRVFEFLTGEWNLVRQLRGPAISRLQK-----------------------MHNVNVVF------------KKLADRGLDISQVE--GGKISAC---------DIVDGHREKTLKLLWYLIFNFQVDVLINQEELTEEI--------KYLERSLRMKISMQKLLHVYPDSSARR---------DSGETDLCMENERLSLLLQWCRVVCLHYGVKIENFTVSFSDGRALCCLVHHYHP 1656 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102937.260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig102937.260.1 >prot_F-distichus_contig102937.260.1 ID=prot_F-distichus_contig102937.260.1|Name=mRNA_F-distichus_contig102937.260.1|organism=Fucus distichus monoicous|type=polypeptide|length=269bp ERRKADEFDFSVSDLAVDLRDGVRLTRLVELVTGEWGLASALRVPAVSRLback to top mRNA from alignment at F-distichus_contig102937:743..1693- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig102937.260.1 ID=mRNA_F-distichus_contig102937.260.1|Name=mRNA_F-distichus_contig102937.260.1|organism=Fucus distichus monoicous|type=mRNA|length=951bp|location=Sequence derived from alignment at F-distichus_contig102937:743..1693- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig102937:743..1693- >mRNA_F-distichus_contig102937.260.1 ID=mRNA_F-distichus_contig102937.260.1|Name=mRNA_F-distichus_contig102937.260.1|organism=Fucus distichus monoicous|type=CDS|length=1614bp|location=Sequence derived from alignment at F-distichus_contig102937:743..1693- (Fucus distichus monoicous)back to top |