mRNA_F-distichus_contig10292.258.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10292.258.1 vs. uniprot
Match: A0A6H5L5K3_9PHAE (TLC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5K3_9PHAE) HSP 1 Score: 352 bits (903), Expect = 1.620e-117 Identity = 166/213 (77.93%), Postives = 182/213 (85.45%), Query Frame = 1
Query: 19 TMYVDGWAARVHDDANLVVLAIMALMAAWSMWKQDSWTQYALTQFAAGYMVLDACWILCNPAGVKSPKTVLGHHVATLLVLVDPLFHPQHALYTACALLVEFNTLLLILRRRVAWGRYLEIPFALSWVALRLAWYPFLAFYFAMCAFPESLTPIYPEPLVKWRESVEGERGPQMFLGSYLAWVGICLFQGWWSCALARTYSRPS--PREKKFL 651
+MYVDG AAR+HDD NL VLA MALMAAW+MWK D WTQYALT FAAGYMVLDACWILCNP+GVKSP+TVLGHHVATL VLVDPL PQHA YTACALLVEFNT LLILRRRV+WG LE+PFALSWVALRL WYPFL FYF MC FPE+L +YPE LV+WR +VE +R MFLGSYLAWVGIC+FQGWWSCAL R+Y RP+ R+KKFL
Sbjct: 57 SMYVDGLAARIHDDMNLAVLAGMALMAAWAMWKGDRWTQYALTLFAAGYMVLDACWILCNPSGVKSPRTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVQWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYGRPAVATRDKKFL 269
BLAST of mRNA_F-distichus_contig10292.258.1 vs. uniprot
Match: A0A835Z8V7_9STRA (TLC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V7_9STRA) HSP 1 Score: 226 bits (577), Expect = 1.960e-67 Identity = 115/197 (58.38%), Postives = 136/197 (69.04%), Query Frame = 1
Query: 34 GWAARVHDDANLVVLAIMALMAAWSMWKQDSWTQYALTQFAAGYMVLDACWILCNPAGVKSPKTVLGHHVATLLVLVDPLFHPQHALYTACALLVEFNTLLLILRRRVAWGR--YLEIPFALSWVALRLAWYPFLAFYFAMCAFPESLTPIYPEPLVKWRESVEGERGPQMFLGSYLAWVGICLFQGWWSCALARTY 618
G A++HDD NLVVL MAL + +M+ +D QY LT FA YMV DA WILCN VKSP+TVLGHH ATL VL+DP HPQHALYT ALLVE NT LLI RRR WG +E PF SWVALRL WYPFLAF++ +CAFP L +YP +V+WR +E + +++ SY AWVGIC+FQ WWS L R Y
Sbjct: 59 GRGAQLHDDMNLVVLLGMALTSMVAMYTRDRALQYGLTVFAVAYMVTDAAWILCNMRAVKSPRTVLGHHAATLAVLIDPYMHPQHALYTCWALLVEANTFLLIARRRFRWGASALVEAPFVASWVALRLIWYPFLAFFWGLCAFP-GLADVYPAAIVRWRLRIEVDL-VRLYPASYAAWVGICVFQLWWSAQLFRNY 253
BLAST of mRNA_F-distichus_contig10292.258.1 vs. uniprot
Match: A0A7S0VYL2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VYL2_9CRYP) HSP 1 Score: 166 bits (420), Expect = 5.000e-45 Identity = 78/199 (39.20%), Postives = 121/199 (60.80%), Query Frame = 1
Query: 1 SKSLIPTMYVDGWAARVHDDANLVVLAIMALMAAWSMWKQDSWTQYALTQFAAGYMVLDACWILCNPAGVKSPKTVLGHHVATLLVLVDPLFHPQHALYTACALLVEFNTLLLILRRRVAWGRYLEIPFALSWVALRLAWYPFLAFYFAMCAFPESLTPIYPEPLVKWRESVEGERGPQMFLGSYLAWVGICLFQGWWS 597
SK+ + A+ +HD NL VL+++ + +++ + LT Y++LD+ W+L P VKSP V+ HH ATLLVL+DPL P H++YT+ LLVE NTLLL+LRR++++ +E+PF +SWV LR WYP L F+F +C+ P +L P++P +V+ R +EG M S ++W +C+ Q W+
Sbjct: 37 SKAAAEVKWQPSAASELHDSCNLFVLSLLGFGSVYALLTNHQASHRLLTTVGFMYVLLDSAWLLAVPTVVKSPGVVIAHHAATLLVLLDPLLSPSHSVYTSACLLVEINTLLLLLRRKMSYSVLVEVPFIISWVLLRNVWYPLLMFFFILCSAPGTLGPLFPRAMVEARRRIEGPEAVPMRFVSMVSWTAVCVLQLKWT 235
BLAST of mRNA_F-distichus_contig10292.258.1 vs. uniprot
Match: A0A7S4PA72_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PA72_GUITH) HSP 1 Score: 159 bits (403), Expect = 2.160e-42 Identity = 90/216 (41.67%), Postives = 127/216 (58.80%), Query Frame = 1
Query: 40 AARVHDDANLVVLAIMALMAAWSMWKQDSWTQYALTQFAAGYMVLDACWILCNPAGVKSPKTVLGHHVATLLVLVDPLFHPQHALYTACALLVEFNTLLLILRRRVAWGRYLEIPFALSWVALRLAWYPFLAFYFAMCAFPESLTPIYPEPL---VKWRESVEGERGPQMFLG-SYLAWVGICLFQGWWSCALARTY----SRPSP----REKKFL 651
A+ +HD+ NL+ L ++ A ++ QD LT Y++LD+ WI P VKSP V HH+ATLLVL+DPL P+H +YT+ LLVE NTLLL+LRRRV++ +E+PF L+WV LR WYP L FYF +C P + P+ P L ++ R +E R P +G S L+W +C+FQ +W+ L + R P +EKK+L
Sbjct: 67 ASDLHDNVNLIALFLLGGGAIAALALQDRNMHDLLTVSGFVYILLDSVWIFSQPKIVKSPGMVGSHHIATLLVLLDPLLQPKHRVYTSACLLVEINTLLLLLRRRVSYSAIVEVPFILTWVLLRNIWYPLLMFYFFLCFSPSTFIPLLPSSLSWVIEMRTKIE-LRNPVPMMGVSLLSWAMVCIFQFYWTAQLFSAHPWIWGRRKPTANGKEKKYL 281
BLAST of mRNA_F-distichus_contig10292.258.1 vs. uniprot
Match: A0A7S2V1S4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S4_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.010e-37 Identity = 80/208 (38.46%), Postives = 122/208 (58.65%), Query Frame = 1
Query: 34 GW----AARVHDDANLVVLAIMALMAAWSMWKQDSWTQYA--LTQFAAGYMVLDACWILCNPAGVKSPKTVLGHHVATLLVLVDPLFHP-----QHALYTACALLVEFNTLLLILRRRVAWGRYLEIPFALSWVALRLAWYPFLAFYFAMCAFPESLTPIYPEPLVKWRESVEGERGPQMFLGSYLAWVGICLFQGWWSCALARTYSR 624
GW + +HD NLV L ++A +A + + +T Y+ LDA WI P+ +KSP TV HH++TL +L+ P+F+ YTA A++VE NT+LL +RR+ +G ++EIPFALSWV +RL WYP L FYF +CAF + P+ ++ RE++EG ++ S +A+V IC+FQ +WS L +++ R
Sbjct: 37 GWNPSKLSELHDSINLVWLTVLASLAIVVLLSFPTCHSLLVLMTTLTTVYIALDAIWIFMFPSSIKSPVTVCLHHISTLAILLGPIFNAISGSGLQGYYTAAAIIVEANTVLLTMRRKFKFGLWVEIPFALSWVLIRLVWYPILGFYFMVCAFHSVRELLAPQFILHIRETIEGPEPEPLWKLSAMAFVLICMFQIFWSVPLVKSWMR 244
BLAST of mRNA_F-distichus_contig10292.258.1 vs. uniprot
Match: A0A7S2B6S7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6S7_9STRA) HSP 1 Score: 114 bits (285), Expect = 3.370e-26 Identity = 65/189 (34.39%), Postives = 105/189 (55.56%), Query Frame = 1
Query: 40 AARVHDDANLVVLAIMALMAAWSMWKQDSWTQYALTQFAAGYMVLDACWILCNPAGVKSPKTVLGHHVATLLVLVDPLFHPQHALYTACALLVEFNTLLLILRRRVAWGRYLEIPFALSWVALRLAWYPFLAFYFAMCAFPESLTPIYPEPLVKWRESVEGERGPQMFLGSYLAWVGICLFQGWWSCAL 606
AA +HD+ N+V+ +++ AA+S+ +T A Y++ D W++ P VKSP ++ HH+ TL VL DP+ H Y +CALLVE NT+L+ LRRR+ + E+ F +W+ALRL W+P L+++F +FPE ++ P + E P + + + + I L Q +W+ AL
Sbjct: 11 AADLHDNINVVITSLIFFSAAFSLAGLPP-GHTVVTFGATAYIIFDIVWVMSQPRIVKSPVEIILHHLGTLAVLYDPITVLNHQKYASCALLVEVNTVLITLRRRLGRPMWCEVSFLATWLALRLIWFPCLSYWFLCSSFPE----VFVMPF-----GIARENNPPIDTSTTVFFCLIVLLQFYWTFAL 189
BLAST of mRNA_F-distichus_contig10292.258.1 vs. uniprot
Match: A0A812KK43_9DINO (NMA1 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812KK43_9DINO) HSP 1 Score: 105 bits (263), Expect = 1.900e-22 Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = 1
Query: 40 AARVHDDANLVVL-AIMALMAAWSMWKQDSWTQYALTQFAAGYMVLDACWILCNPAGVKSPKTVLGHHVATLLVLVDPLFHPQHALYTACALLVEFNTLLLILRRRVAWGRYLEIPFALSWVALRLAWYPFLAFYFAMCAFP-ESLTPIYPEPLVKWRESVEGERGPQMFLGSYLAWVGICLFQGWWSCALAR 612
A +HD N+ L AI AL AA ++S + A Y+V DA WI P VK+P +V+ HH+ TL+V+V+P+F+ H + + ALLVE NT+LL LRR + + E+ F L+W +RL W+P L F S P PL V R P + + L++ + + Q +W+CA+ R
Sbjct: 16 AGLLHDWVNVAALTAIFALSAAALESGEESSLHTIVIAVTAAYLVSDALWIALQPDMVKTPVSVILHHLVTLIVIVEPMFYESHRVNASRALLVEINTVLLTLRRLLGRPAWCELGFYLTWAVIRLIWFPALGTALLASTFGWTSPLAALPPPLTALVVEV---RPPAIRSYASLSFAAVVMLQFYWTCAMGR 205
BLAST of mRNA_F-distichus_contig10292.258.1 vs. uniprot
Match: A0A812JJT5_9DINO (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812JJT5_9DINO) HSP 1 Score: 106 bits (265), Expect = 4.400e-21 Identity = 69/193 (35.75%), Postives = 101/193 (52.33%), Query Frame = 1
Query: 40 AARVHDDANLVVL-AIMALMAAWSMWKQDSWTQYALTQFAAGYMVLDACWILCNPAGVKSPKTVLGHHVATLLVLVDPLFHPQHALYTACALLVEFNTLLLILRRRVAWGRYLEIPFALSWVALRLAWYPFLAFYFAMCAFP-ESLTPIYPEPLVKWRESVEGERGPQMFLGSYLAWVGICLFQGWWSCALAR 612
A +HD N+ L AI AL AA ++S + A Y+V DA WI P VK+P +V+ HH+ TL+V+V+P+F+ H + + ALLVE NT+LL LRR + + E+ F L+W +RL W+P L F S P PL V R P + + L++ + L Q +W+CA+ R
Sbjct: 16 AGLLHDWVNVAALTAIFALSAAALESGEESSLHTIVIAVTAAYLVSDALWIALQPDMVKTPVSVILHHLVTLIVIVEPMFYESHRVNASRALLVEINTVLLTLRRLLGRPAWCELGFYLTWAVIRLIWFPALGTALLASTFGWTSPLAALPPPLTALVVEV---RPPAIRSYASLSFAAVVLLQFYWTCAMGR 205
BLAST of mRNA_F-distichus_contig10292.258.1 vs. uniprot
Match: A0A7S0ASE2_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0ASE2_9DINO) HSP 1 Score: 96.7 bits (239), Expect = 4.680e-19 Identity = 62/193 (32.12%), Postives = 102/193 (52.85%), Query Frame = 1
Query: 52 HDDANLVVLAIMALMAAWSMWK-QDSWTQYALTQFAAGYMVLDACWILCNPAGVKSPKTVLGHHVATLLVLVDPLFHPQHALYTACALLVEFNTLLLILRRRVAWGRYLEIPFALSWVALRLAWYPFLAFYFAMCA----FPESLTPIYPEPLVKWRESVEGERGPQMFLGSYLAWVGICLFQGWWSCALART 615
HD N+V L ++ MA+ S+W +DS + F + Y+V D W+ PA V++P +++ HHV TL+V+ + + H + + ALLVE NT+LL LRRR+ + E F +W LRL W+P L+ AM A F + L P L+ V+ P + + +++ + + Q +W+ L R+
Sbjct: 28 HDWVNVVTLCLIFAMASASLWSGEDSLGHTMVVVFTSTYLVCDIVWVTLQPAIVRTPGSIVAHHVVTLVVIYGTVENVTHRVNASRALLVEINTVLLTLRRRLGRPVWCEAAFYATWGLLRLVWFPILSV--AMLASTFGFADQLRASMPACLL-----VDVRSPPPIKAYASISFAAVVVLQYYWTFTLLRS 213
BLAST of mRNA_F-distichus_contig10292.258.1 vs. uniprot
Match: A0A813G2R2_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G2R2_POLGL) HSP 1 Score: 94.7 bits (234), Expect = 1.120e-18 Identity = 53/133 (39.85%), Postives = 79/133 (59.40%), Query Frame = 1
Query: 40 AARVHDDANLVVLAIMALMAAWSMWK-QDS-WTQYALTQFAAGYMVLDACWILCNPAGVKSPKTVLGHHVATLLVLVDPLFHPQHALYTACALLVEFNTLLLILRRRVAWGRYLEIPFALSWVALRLAWYPFL 432
A VHD N+ VL+++ ++A+ + +DS W A+ A Y+ D WI NP+ VK+PK +L HH TL+V++D + H + AL+VE NT+LL LRR + + EI F L+WV +RL W+P L
Sbjct: 34 AGLVHDWVNIGVLSLVFVLASIGILSGEDSVWHTVAIAVMCA-YLAGDVVWIAVNPSMVKTPKAILAHHAVTLIVIMDTIESASHRANASHALIVEINTVLLTLRRILGRPLWCEIGFYLTWVGIRLVWFPAL 165 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10292.258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10292.258.1 >prot_F-distichus_contig10292.258.1 ID=prot_F-distichus_contig10292.258.1|Name=mRNA_F-distichus_contig10292.258.1|organism=Fucus distichus monoicous|type=polypeptide|length=211bp MYVDGWAARVHDDANLVVLAIMALMAAWSMWKQDSWTQYALTQFAAGYMVback to top mRNA from alignment at F-distichus_contig10292:2654..6024+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10292.258.1 ID=mRNA_F-distichus_contig10292.258.1|Name=mRNA_F-distichus_contig10292.258.1|organism=Fucus distichus monoicous|type=mRNA|length=3371bp|location=Sequence derived from alignment at F-distichus_contig10292:2654..6024+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10292:2654..6024+ >mRNA_F-distichus_contig10292.258.1 ID=mRNA_F-distichus_contig10292.258.1|Name=mRNA_F-distichus_contig10292.258.1|organism=Fucus distichus monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at F-distichus_contig10292:2654..6024+ (Fucus distichus monoicous)back to top |