mRNA_F-distichus_contig10291.257.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10291.257.1
Unique NamemRNA_F-distichus_contig10291.257.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10291.257.1 vs. uniprot
Match: A0A6H5K2B1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B1_9PHAE)

HSP 1 Score: 474 bits (1221), Expect = 7.220e-164
Identity = 245/359 (68.25%), Postives = 277/359 (77.16%), Query Frame = 1
Query:   10 LQAKRHHRMKVSVNSDDPVQAKLNKTPLAISLGNMRLLRETVIMKWKDINRSYQGALLGDTLLHLVCREGYLGALKFMVDPNSKPSSETEKLDPNKVNKQKRTPLMLCFSSPQLTTTANNFGLMKDPETGLAIARAKYPDSGQTPQDWMKPGTRADREEMVRILVKDVKASVTVLDIHDYSLLHYAAISGWEGTIKLLLEHGVDPRQTCSTGETALDFAVLLRHRKAAGELLKGCPDLVDEADKDGNRAIHLAIQNQDQETVKLLNDFSADINSPNYLRITPLSVACKLQDWQMVNLLLD------------------LKLARASGGHRVQTAKLGVLKAHGQWVPYKDKMGRGIFYYN 1032
            LQ K++H+M+  V+ DDP+ AK+NK PL ISLG+MRLLRETVIMKWKDINRSYQG LLG+T+LH VCREGYLGALKFM+DPNSK   ETE +DPN  NK+KRT LMLCF+SP  T  A +FGL +D ETGL + R + PD   T QDWMKPGTRADREEMVRILV+D+KA V VLD+HDYSLLHYA+ISGWEGTI LLLEHG+DPRQTC TGETAL FAV LRH +AA  LLK   DLV+EADKDG+RAIHLA+QN D E V LL D+ ADINSPNY R+TPL+VACK QDWQMVN LLD                  LKLARA G      A+L  LKA+GQWVPY DKM  GIFYYN
Sbjct:   59 LQIKKYHQMEAKVSQDDPMLAKMNKIPLQISLGDMRLLRETVIMKWKDINRSYQGPLLGETVLHRVCREGYLGALKFMLDPNSKSIFETETVDPNIPNKRKRTALMLCFTSPHFTEIAKHFGLEQDAETGLGVPRPRRPD---TAQDWMKPGTRADREEMVRILVEDLKADVNVLDMHDYSLLHYASISGWEGTIDLLLEHGIDPRQTCMTGETALHFAVSLRHGEAAEILLKRSQDLVNEADKDGDRAIHLAVQNGDHEIVDLLVDYQADINSPNYRRVTPLAVACKRQDWQMVNHLLDKKAEKKIRWRLKREEEERLKLARAVGDREADAARLKALKAYGQWVPYADKMDGGIFYYN 414          
BLAST of mRNA_F-distichus_contig10291.257.1 vs. uniprot
Match: D7G1C5_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C5_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 5.440e-152
Identity = 231/374 (61.76%), Postives = 262/374 (70.05%), Query Frame = 1
Query:   10 LQAKRHHRMKVSVNSDDPVQAKLNKTPLAISLGNMRLLRETVIMKWKDINRSYQGALLGDTLLHLVCREGYLGALKFMVDPNSKPSSETEKLDPNKVNKQKRTPLMLCFSSPQLTTTANNFGLMKDPETGLAIARAKYPDSGQTPQDWMKPGTRADREEMVRILVKDVKASVTVLDIHDYSLLHYAAISGWEGTIKLLLEHGVDPRQTCSTGETALDFAVLLRHRKAAGELLKGCPDLVDEADKDGNRAIHLAIQNQDQETVKLLNDFSADINSPNYLRITPLSVACKLQDWQMVNLLLDLKLARASGGHRVQTAKLGVLKAHGQWVPYKDKMGRGIFYYNMVSRESRWQAPEDYAKDKDYVMNAATFGMHFYH 1131
            LQ K++H+M+  V+ DDP+ AK+NK PL ISLG+MRLLRETVIMKWKDINRSYQG LLG+T+LH VCREGYLGALKFM+DPNSK   ETE +DPN +NK+KRT LMLCF+SP  T    NFGL +D ETGL + R + PD+ Q                                                 GTI LLLEHG+DPRQTC TGETAL FAV LRH +AA  LLK   DLV+EADKDG+RAIHLA+QN D E V LL D+ ADINSPNY R+TPL+VACK QDWQMVN LLD KLARA G      A+L  LKA+GQWVPY DKMG GIFYYN VSRESR QAPEDY KDK+YVM +ATFGMHFYH
Sbjct:   59 LQIKKYHQMEAKVSQDDPILAKMNKIPLQISLGDMRLLRETVIMKWKDINRSYQGPLLGETVLHRVCREGYLGALKFMLDPNSKSIFETETVDPNILNKRKRTALMLCFTSPHFTEITKNFGLEQDTETGLGVPRPRRPDTAQ-------------------------------------------------GTIDLLLEHGIDPRQTCMTGETALHFAVSLRHGEAAEILLKRSQDLVNEADKDGDRAIHLAVQNGDHEIVNLLVDYQADINSPNYRRVTPLAVACKRQDWQMVNHLLDKKLARAVGDREADAARLKALKAYGQWVPYTDKMGGGIFYYNKVSRESRRQAPEDYVKDKEYVMKSATFGMHFYH 383          
BLAST of mRNA_F-distichus_contig10291.257.1 vs. uniprot
Match: A0A835Z5D7_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5D7_9STRA)

HSP 1 Score: 337 bits (865), Expect = 8.850e-108
Identity = 190/425 (44.71%), Postives = 246/425 (57.88%), Query Frame = 1
Query:   25 HHRMKVSVNSDDPVQAKLNKTPLAISLGNMRLLRETVIMKWKDINRSYQGALLGDTLLHLVCREGYLGALKFMVDPNSKPSSETEKLDPNKVNKQKRTPLMLCFSSPQLTTTANNFGLMKDPETGLAIARAKYPDSGQTPQDWMKPGTRADREEMVRILVKDVKASVTVLDIHDYSLLHYAAISGWEGTIKLLLEHGVDPRQTCSTGETALDFAVLLRHRKAAGELLKGCPDLVDEADKDGNRAIHLAIQNQ-DQETVKLLNDFSADINSPNYLRITPLSVACKLQDWQMVNLLLDLKLARAS---------GGHRVQT---------AKLG-------------------------------------VLKAHGQWVPYKDKMGRGIFYYNMVSRESRWQAPEDYAKDKDYVMNAATFGMHFYH 1131
            H   ++++ + DP+  + N+ P A++ G+MR LRE VI +WKD+NR YQG   GDTLLH+VCREGY G   FM+DP +K + E   LD N  NK+ RTPLMLCF+ P LT  A   GL +DPE G    +AK P+      DW+ PG R  RE +V  L+    A V  LD+HDY+ LHYAA+ GW G+++ LL+ G DP     TGETAL  A+  RH  AA  LL   P LVDE+D+DG RAIH AI+ +  +E ++LL D  AD+N+P+Y  +TPL +AC LQD   V+ LLDLK+ R S          G R++          A+L                                        +A+GQWVPY DK GRGIFYYN VSRE+RW+ P DY +DK YVM +AT GM FYH
Sbjct:  178 HQDDRLNLVTADPLVERANRNPAAVAGGDMRKLRECVIQRWKDVNRPYQGVFGGDTLLHVVCREGYDGMAVFMLDPATKSAFEQVTLDVNATNKKGRTPLMLCFTPPSLTLVAKANGLEQDPEIGCGRPKAKRPEELTVAADWLPPGDREARERLVERLLA-AGARVNALDLHDYTCLHYAAMLGWVGSVEALLKAGADPGHKSVTGETALHLAIERRHGAAAESLLLASPSLVDESDRDGTRAIHTAIRCRCGREFLELLADHKADMNAPDYSGVTPLQLACSLQDHAAVSALLDLKVVRESPALALLKGDDGDRIRARIAQEDAERARLAQDALSAQASDAQARXXXXXXXXXXXXXXXXXXXXXXXAHRAYGQWVPYIDKQGRGIFYYNKVSRETRWEQPPDYVQDKAYVMKSATHGMSFYH 601          
BLAST of mRNA_F-distichus_contig10291.257.1 vs. uniprot
Match: A0A8J2X0P4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0P4_9STRA)

HSP 1 Score: 242 bits (617), Expect = 2.430e-72
Identity = 154/403 (38.21%), Postives = 210/403 (52.11%), Query Frame = 1
Query:   52 SDDPVQAKLNKTPLAISLGNMRLLRETVIMKWKDINRSYQGALLGDTLLHLVCREGYLGALKFMVDPNSKPSSETEKLDPNKVNKQKRTPLMLCFSSPQLTTTANNFGLMKDPETGLAIARAKYPDSGQTPQDWMKPGT---RA-DREEMVRILVKDVKASVTVLDIHDYSLLHYAAISGWEGTIKLLLEHGVDPRQT------CSTGETALDFAVLLRHRKAAGELLKGCPDLVDEADKDGNRAIHLAIQNQDQETVKLLNDFSADINSPNYLRITPLSVACKLQDWQMVNLLLDLKLARASGGH------------------------------RVQTA---KLGVLKAHGQWVPYKDKMGRGIFYYNMVSRESRWQAPEDYAKDKDYVMNAATFGMHFYH 1131
            +DDP  ++  K   AI+ GN R LR  +I +W+ +NR Y   L  DTLLH+ CREGYL  ++F+ DP ++P  E  +LD N  N + RTPL + F+ P  T  A  FG+      GL +A  K PD   +  +W++PGT   RA DR+++V  L+K  K  +  +D HD+S LHYA + GW  T+ LLLE G DP  +       S G+ AL       H      LL      ++  + DG  A+H A      E V+ L +F A++N  +Y R TPL  AC+ Q   +V+ LLD    R                                   R++ A   K G   A G WVPY+DK GRGIFYYN VSR S+++ PEDY KD+ Y+M  AT+GMHFYH
Sbjct:   70 TDDPRASRQTKESEAIAGGNFRALRGILISEWRFVNRKYPN-LNDDTLLHIACREGYLRMVQFITDPKNQPQFENVELDVNLENGKWRTPLHVAFTPPVETFCARRFGV---DSKGLPLA--KKPDGDVSDMEWIRPGTARTRAEDRQKIVACLIKR-KCDLNKVDYHDHSALHYACVWGWVPTVDLLLEEGADPECSNIGALAASCGQNALMLCADFLHVPLIDLLLSETEISIESKNVDGETALHYAALRGSMEAVEALLEFGANVNCESYARDTPLKRACRQQRVDLVHKLLDYDCNRRPSAFAILEGEALMEITLRLDEEKRKKVEEYEKLKRLEAAGKNKKGKKSAIGAWVPYRDKRGRGIFYYNRVSRVSQFEVPEDYEKDRRYLMKDATYGMHFYH 465          
BLAST of mRNA_F-distichus_contig10291.257.1 vs. uniprot
Match: F0Y8C8_AURAN (JmjC domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8C8_AURAN)

HSP 1 Score: 210 bits (534), Expect = 1.360e-56
Identity = 133/380 (35.00%), Postives = 198/380 (52.11%), Query Frame = 1
Query:   43 SVNSDDPVQAKLNKTPLAISLGNMRLLRETVIMKWKDINRSYQGALLGDTLLHLVCREGYLGALKFMVDPNSKPSSETEKLDPNKVNKQKRTPLMLCFSSPQLTTTANNFGLMKDPETGLAIARAKYPDSGQTPQDWMKPGTRADREEMVRILVKDVKASVTVLDIHDYSLLHYAAISGWEGTIKLLLEHGVDPRQTCST----GETALDFAVLLRHRKAAGELLKGCPDLVDEADKDGNRAIHLAIQNQDQETVKLLNDFSADINSPNYLRITPLSVACKLQDWQMVNLLLDL---------------------------KLARASGGHRVQTAKLGVLK---------AHGQWVPYKDKMGRGIFYYNMVSRESRWQA 1062
            S   +DP  ++  KT  +I+LGN R LRE +I  +  +N+ Y GA   DTLLH+VCREGYL  ++FMVDP +    +T ++D N  N + RTPL + F+ PQ T  A   G+  D      + + + P+      DW++PGT   R +++ +L+ D  A++  +D HD+S LHYA + GW  T++LLLE G DPR    T    G+ AL  A   +H      LL      ++  + DG  A+       D ETV+ L +F A++N+ +Y + +PL  AC+ QD  M++ LLD                            +L + +    ++ AK    K         A G+W PY+DK GRGIFYYN VSR S+++A
Sbjct: 1157 SSGGNDPRGSRAAKTAESIALGNFRELREIIIGHFAQVNKRY-GAWDNDTLLHIVCREGYLRMVEFMVDPKNVSQFDTTEIDFNAENNKWRTPLHVVFTPPQETYCARKIGVHDD-----GLPKGEKPEGVTIDSDWIRPGTERHRMQVIELLI-DKGANIHQMDYHDHSPLHYACVWGWVDTVELLLEKGADPRADPETSNIAGQNALMAATEFKHVDVVDLLLSETQISIESKNVDGETALIYGALTGDVETVECLCEFGANVNAESYSKDSPLKRACRNQDVPMIHKLLDFAATRRPSAFELLEGDAKQVILDRLEAERLEKLAEFEAIKNAKASGKKGGGRGAKASAVGEWRPYRDKRGRGIFYYNRVSRVSQFEA 1529          
BLAST of mRNA_F-distichus_contig10291.257.1 vs. uniprot
Match: F0YPL7_AURAN (JmjC domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPL7_AURAN)

HSP 1 Score: 143 bits (361), Expect = 8.770e-34
Identity = 78/194 (40.21%), Postives = 116/194 (59.79%), Query Frame = 1
Query:   43 SVNSDDPVQAKLNKTPLAISLGNMRLLRETVIMKWKDINRSYQGALLGDTLLHLVCREGYLGALKFMVDPNSKPSSETEKLDPNKVNKQKRTPLMLCFSSPQLTTTANNFGLMKDPETGLAIARAKYPDSGQTPQDWMKPGTRADREEMVRILVKDVKASVTVLDIHDYSLLHYAAISGWEGTIKLLLEHGVDP 624
            S   +DP  ++  KT  +I+LGN R LRE +I  +  +N+ Y GA   DTLLH+VCREGYL  ++FMVDP +    +T ++D N  N + RTPL + F+ PQ T  A   G+  D      + + + P+      DW++PGT   R +++ +L+ D  A++  +D HD+S LHYA + GW  T++LLLE G DP
Sbjct:  377 SSGGNDPRGSRAAKTAESIALGNFRELREIIIGHFAQVNKRY-GAWDNDTLLHIVCREGYLRMVEFMVDPKNVSQFDTTEIDFNAENNKWRTPLHVVFTPPQETYCARKIGVHDD-----GLPKGEKPEGVTIDSDWIRPGTERHRMQVIELLI-DKGANIHQMDYHDHSPLHYACVWGWVDTVELLLEKGADP 563          
BLAST of mRNA_F-distichus_contig10291.257.1 vs. uniprot
Match: A0A7S3JPN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPN4_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 4.480e-10
Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 1
Query:   82 KTPLAISLGNMRLLRETVIMKWKDINRSYQGALLGDTLLHLVCREGYLGALKFMVDPNS 258
            KT   I+LGNMRLLRE V+     IN+ Y G   GDTLLH++CREGY   ++FM+D N+
Sbjct:   62 KTAEEIALGNMRLLREQVVAHSTQINKKYFGGWGGDTLLHIICREGYARMVEFMMDSNN 120          
BLAST of mRNA_F-distichus_contig10291.257.1 vs. uniprot
Match: A0A7S3M4K0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4K0_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 8.090e-8
Identity = 29/69 (42.03%), Postives = 46/69 (66.67%), Query Frame = 1
Query:   70 AKLNKTPLAISLGNMRLLRETVIMKWKDINRSYQGALLGDTLLHLVCREGYLGALKFMVDPNSKPSSET 276
            +K +K   ++  GNM+ LR  V++ +K+INR Y    LG+TLLH+VC+EGY   L+FM +P ++   +T
Sbjct:   72 SKFSKIADSVLHGNMKELRNQVVVYFKNINRKYTDHHLGNTLLHMVCQEGYYSMLQFMFNPANRSDLDT 140          
BLAST of mRNA_F-distichus_contig10291.257.1 vs. uniprot
Match: UPI0003817DFC (ankyrin repeat domain-containing protein n=1 Tax=Thiofilum flexile TaxID=125627 RepID=UPI0003817DFC)

HSP 1 Score: 61.6 bits (148), Expect = 1.660e-6
Identity = 44/153 (28.76%), Postives = 75/153 (49.02%), Query Frame = 1
Query:  472 ADREEMVRILVKDVKASVTVLDIHDYSLLHYAAISGWEGTIKLLLEHGVDPRQTCSTGETALDFAVLLRHRKAAGELLKGCPDL-----VDEADKDGNRAIHLAIQNQDQETVKLLNDFSADINSPNYLRITPLSVACKLQDWQMVNLLLDLK 915
            A  +E + + + D  +   + +    + L +A  S  + TIK+LL+ G DP      G   +  A  L + K    LLK   +      +D+ DK+GN A+HLA+ NQ+   ++LL    A+    N   +TPL +A +  +  ++N LL+ K
Sbjct: 1964 AANQERITLTLLDNLSIADMTNSKRETPLQWAIYSQAQNTIKVLLQAGADPNLVNQAGNNTVLIAANLPNEKTLKSLLKIAQEQDVKLNLDQRDKNGNTALHLAVLNQNPAIIELLLQAGANTEIYNNDSLTPLLLAVEKPNLVIINSLLNYK 2116          
BLAST of mRNA_F-distichus_contig10291.257.1 vs. uniprot
Match: A0A812SU87_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SU87_SYMMI)

HSP 1 Score: 55.5 bits (132), Expect = 1.960e-5
Identity = 40/118 (33.90%), Postives = 59/118 (50.00%), Query Frame = 1
Query:  577 GWEGTIKLLLEHGVDPRQTCSTGETALDFAVLLRHRKAAGELLKGCPDLVDEADKDGNRAIHLAIQNQDQ--ETVKLLNDFSADINSPNYLRITPLSVACKLQDWQMVNLLLDLKLAR 924
            GW      L+  G D   T  TG T L  AV   +      LL      V+  D DG+ A+ LA +  +   E  ++L    AD NS N  + +PL++ACK Q+ ++V+LLLD ++ R
Sbjct:    3 GWTPICVSLIAAGADINDTTVTGRTPLMLAVEFENDLTVKYLLTKQGIHVNATDSDGSTALILAAELNEFGIEMSRMLLQKKADPNSENRKKRSPLTIACKAQNMELVHLLLDNQVQR 120          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10291.257.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5K2B1_9PHAE7.220e-16468.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1C5_ECTSI5.440e-15261.76Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A835Z5D7_9STRA8.850e-10844.71Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A8J2X0P4_9STRA2.430e-7238.21Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0Y8C8_AURAN1.360e-5635.00JmjC domain-containing protein n=1 Tax=Aureococcus... [more]
F0YPL7_AURAN8.770e-3440.21JmjC domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S3JPN4_9STRA4.480e-1054.24Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A7S3M4K0_9STRA8.090e-842.03Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
UPI0003817DFC1.660e-628.76ankyrin repeat domain-containing protein n=1 Tax=T... [more]
A0A812SU87_SYMMI1.960e-533.90Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10291contigF-distichus_contig10291:4152..8288 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score448.4
Seed ortholog evalue3.4e-123
Seed eggNOG ortholog2880.D7G1C5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.temperature-gated cation channel activity
EggNOG OGsCOG0666@1,KOG0510@2759
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-00_005590.1
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1134
Cds size1134
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928946.279303-CDS-F-distichus_contig10291:4151..43691622928946.279303-CDS-F-distichus_contig10291:4151..4369Fucus distichus monoicousCDSF-distichus_contig10291 4152..4369 +
1690885077.4439332-CDS-F-distichus_contig10291:4151..43691690885077.4439332-CDS-F-distichus_contig10291:4151..4369Fucus distichus monoicousCDSF-distichus_contig10291 4152..4369 +
1622928946.2889638-CDS-F-distichus_contig10291:4567..47871622928946.2889638-CDS-F-distichus_contig10291:4567..4787Fucus distichus monoicousCDSF-distichus_contig10291 4568..4787 +
1690885077.4561083-CDS-F-distichus_contig10291:4567..47871690885077.4561083-CDS-F-distichus_contig10291:4567..4787Fucus distichus monoicousCDSF-distichus_contig10291 4568..4787 +
1622928946.2982867-CDS-F-distichus_contig10291:5269..53821622928946.2982867-CDS-F-distichus_contig10291:5269..5382Fucus distichus monoicousCDSF-distichus_contig10291 5270..5382 +
1690885077.4659662-CDS-F-distichus_contig10291:5269..53821690885077.4659662-CDS-F-distichus_contig10291:5269..5382Fucus distichus monoicousCDSF-distichus_contig10291 5270..5382 +
1622928946.3094199-CDS-F-distichus_contig10291:6590..67801622928946.3094199-CDS-F-distichus_contig10291:6590..6780Fucus distichus monoicousCDSF-distichus_contig10291 6591..6780 +
1690885077.473826-CDS-F-distichus_contig10291:6590..67801690885077.473826-CDS-F-distichus_contig10291:6590..6780Fucus distichus monoicousCDSF-distichus_contig10291 6591..6780 +
1622928946.3218365-CDS-F-distichus_contig10291:7196..73701622928946.3218365-CDS-F-distichus_contig10291:7196..7370Fucus distichus monoicousCDSF-distichus_contig10291 7197..7370 +
1690885077.48321-CDS-F-distichus_contig10291:7196..73701690885077.48321-CDS-F-distichus_contig10291:7196..7370Fucus distichus monoicousCDSF-distichus_contig10291 7197..7370 +
1622928946.331066-CDS-F-distichus_contig10291:7718..78381622928946.331066-CDS-F-distichus_contig10291:7718..7838Fucus distichus monoicousCDSF-distichus_contig10291 7719..7838 +
1690885077.4974713-CDS-F-distichus_contig10291:7718..78381690885077.4974713-CDS-F-distichus_contig10291:7718..7838Fucus distichus monoicousCDSF-distichus_contig10291 7719..7838 +
1622928946.3694782-CDS-F-distichus_contig10291:8189..82881622928946.3694782-CDS-F-distichus_contig10291:8189..8288Fucus distichus monoicousCDSF-distichus_contig10291 8190..8288 +
1690885077.5065968-CDS-F-distichus_contig10291:8189..82881690885077.5065968-CDS-F-distichus_contig10291:8189..8288Fucus distichus monoicousCDSF-distichus_contig10291 8190..8288 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10291.257.1prot_F-distichus_contig10291.257.1Fucus distichus monoicouspolypeptideF-distichus_contig10291 4152..8288 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10291.257.1

>prot_F-distichus_contig10291.257.1 ID=prot_F-distichus_contig10291.257.1|Name=mRNA_F-distichus_contig10291.257.1|organism=Fucus distichus monoicous|type=polypeptide|length=378bp
MVALQAKRHHRMKVSVNSDDPVQAKLNKTPLAISLGNMRLLRETVIMKWK
DINRSYQGALLGDTLLHLVCREGYLGALKFMVDPNSKPSSETEKLDPNKV
NKQKRTPLMLCFSSPQLTTTANNFGLMKDPETGLAIARAKYPDSGQTPQD
WMKPGTRADREEMVRILVKDVKASVTVLDIHDYSLLHYAAISGWEGTIKL
LLEHGVDPRQTCSTGETALDFAVLLRHRKAAGELLKGCPDLVDEADKDGN
RAIHLAIQNQDQETVKLLNDFSADINSPNYLRITPLSVACKLQDWQMVNL
LLDLKLARASGGHRVQTAKLGVLKAHGQWVPYKDKMGRGIFYYNMVSRES
RWQAPEDYAKDKDYVMNAATFGMHFYH*
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mRNA from alignment at F-distichus_contig10291:4152..8288+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10291.257.1 ID=mRNA_F-distichus_contig10291.257.1|Name=mRNA_F-distichus_contig10291.257.1|organism=Fucus distichus monoicous|type=mRNA|length=4137bp|location=Sequence derived from alignment at F-distichus_contig10291:4152..8288+ (Fucus distichus monoicous)
ATGGTCGCTTTACAGGCGAAGCGGCACCACCGAATGAAGGTCAGCGTGAA CTCAGACGATCCGGTCCAAGCGAAGCTCAACAAAACGCCCTTGGCGATCT CGCTTGGGAATATGCGACTTCTCCGAGAGACCGTGATAATGAAGTGGAAG GACATCAACCGTAGCTATCAAGGGGCTTTACTCGGGGATACTTTGCTCCA TCTAGTGTGCCGAGAAGGGTGAGGGGCAATACTATTATTAATAGTATATC GTGAAAACATTTACTGCAGTGGTACTGAATGTTCGTCGTATCTGCAATCA ACAACTCTTTCCCGGTCTTCAAATGTTTGGGGGGTGTTTTCTTTTAGGAC TACGTCTTGAACCTTTGCAAGCGCTCTTGAAAGCCTTTAACGTCTGATCG TTTCTTGCCAGTACAGGTATCTCGGGGCTCTTAAATTCATGGTTGACCCG AATTCGAAGCCAAGCTCCGAAACGGAGAAGCTCGACCCGAACAAAGTCAA CAAGCAAAAACGGACACCGCTGATGCTGTGCTTCTCAAGCCCACAATTAA CCACGACCGCAAACAACTTCGGTCTCATGAAAGATCCGGAAACTGGACTC GCAATTGCTCGTGCAAAATATCCGGATTCAGGACAGGTGAGGTGGCATGG ACTGTCGCTCATTAAGGCGCACGCCTATTCGCGTATTGAGTAGTACTTTT GATAACCATTTTCCGAGAGAGGGTGGCGTTGTGCAACGAGAGATCCACAA TCCAGAGCAAGCGCAATAATTGCGTTCATGTCCAAGATAGTGACAACACC GTCCGGTACACTCCAACACGTGATGGCACCCAGAAAGATACTGTATCCAT CCAGAGCATTGTAGAATTATGTTCTTTCTCTTCCTCCTGCTTTGCTGCAA CGTCTAGAAAGCGAGTGTAGTTCAACGAGAGCCCGCTTTGGACTAAAATA ACGAAACAAAGTTATGTCCCACGACTGATTAGTATAGAACCCACGACTGA TTAGACTTGCCAGCTCTGATTGGTCTAGTGAGTCAACTTCTGGCTATATT TTCAGAGCTGCAAGCACCCACCGTGCGCTTTTTATTGGACGATTGCCTCG TCGTCGGTTGATGGATAGACGCCACAGGATTGGATGAAGCCGGGGACTCG AGCTGACCGCGAGGAGATGGTACGCATTCTGGTGAAAGACGTGAAAGCTA GCGTGACCGTGCTCGACATTCACGACTACAGGTTGCGCTACAAGATGTCT TTATAATAAACAACAAACCATACGGTACAGTCCACAGGGCTTAACTCTAA AACACCAGTGCCGTCAATAGCCATAACAGCCTTCCAGATGAAACGGTTGG TTGGAATGGCAGGTAGGCACGTGGAGAGGGCGAAACGAAACAACATTCAA CCTTGATAGGAAGGTGCTGGGTTCTTTTTAATAGCATAGCTTGTACACAA CGATAGTCACTGACTGTGTCGTCGCCGTGCAAGGTGTTCGAATGACAGGC TTTCGGAACTTTTATATTATACACCGAATAGTTAAGTTTTTTTTTAATCA AGTGACGCAGCAAGAAGGCCGTGAAATCATGATCCATGATCCATAATACA TGATGATCCATGAAGCATACATAGATCGTGAACAACTATCAGTACTCTAA CCATCCGTAATATTGCCATTTTATTATTATTATTATTAATTGAAGGCATC TAAACCTTTTGAGCATCCACCCGGTCAGGTGCCGTGAATTCGTTCAAACA ACGATTGGGGGGGACGGGGATGTAACATATTTGTCCCCGTTTTGGGAGGG AACGGCACGAAAATAGCCCCTACCGGGGACATACTTGACCAACCCCCTGG TCAATTGCGATAGATTCGGGGCAGCTTGCCCACCATGTAGGGGATCATGT AGTCCCATCCCCGGAAGGGGCTGTTTTGGTGACCTCACCGGGAACAAAGT CGTCGTATCCCCACCCTCCCCAATCGTTGAATCATGTCACATCCATGATG TGCACTTTTGTACTGGCCAACCTATTAATATGTGATTATTCCTGACTTAC TTCGTAAAAGTTTTTGATTGTTCGGCGATGTTCAAGGACATACCATGCCC CTTCGTTGGGGCCCATCTTCCCTGGCCATCGCTTTCTCAGTGCAGTACTA TAGTATAGTATTCTCCGGAATATCTCATTCGCGATTATCTCTCGTGTTGA TCGCAGCCGGCTGGACTCGAAATACTCGACGCAACAGTTGATGTAAATCC GAAATTATTCCAACAAGACTTCCACTTCGTGGTATTGTTGATATTAATAG TTTTGACTATTAAAAGTTGAGGTGGCAAATTTCCAGTTACACCTTTTTTA TCTTTTTGTTTCACGTGTACTATTAATACTCGTAAAATGTCTCGTCTCGG CGTTACTACTACGTATACCGTATACCTTAATTTATTAAGCTTGTTGCACT ACGCGGCTATAAGTGGATGGGAGGGCACGATCAAACTGCTCCTGGAACAT GGCGTGGACCCTCGACAGACTTGCTCGACGGGAGAAACGGCGTTGGATTT TGCCGTCTTATTACGCCACAGAAAGGCGGCCGGAGAACTTTTGAAAGGCT GTCCGGACCTCGTCGATGAAGCTGATAAGGTCAGCTAGCCGGATTAGTCT TTACTTATATAAGTATTATCCAAATTTGTATCGTTGAGATTTTGGCGGAC ACAAGGAAGAAAAGACGAATGAAAAGCAGCATGCCTCGGATGGTCTTGGG GTTGACTCGTGAGACTCATACAGCGGATTTGCATGCTTAGAGTTATTCGT GATGCCATACGAAACCAGTGCCAGTGCAGAGTCCTACTGTCTTGTGCTTT CTTGAGGCATGTTATTAATGTTATTAAAATGGTGTTGCCAGATTTTTCTA CCGGAAGTAAGAAGCCTCAACTGGAGGTAAACCCTGTACGGAGTTTTGTC GCCAGAAGAAGCAAGTGGTAAAGCGATCGAGCAGGTATGTATATGATAAT GGTGGCGAGCAGTACAGATTATATCGTTCCCTCCTCCTGTTCCAGGACGG CAATCGGGCAATCCACTTGGCCATTCAGAACCAAGATCAGGAGACCGTAA AACTCCTGAACGACTTTTCGGCGGACATTAACTCTCCCAACTACCTGAGA ATCACGCCGCTATCCGTGGCATGCAAGCTTCAGGACTGGCAGATGGTTAA CCTTCTCTTGGATTTGAAGGTGAGCTGTACTAGCAAACAAACTGCACTTA CATTAGAGCTCATGTTAGTCAGGTAAAAAACAAAAACAGACTCTGGCTGT AGCGGGAACCTCTTGAACGGTGTCAATCGGTGGATATTGTCTTCGGCTTT GCCAGGCAGATGGTCGCCCATCGCGAAATACTTCATTTCATTTGTCCGGA AACCCTAAATATCTGCCTCCCCACGTATCGAATCAATCAAAGACACTGTC GAACCCTTATATAATCAAAAGGTCACTCACGAAGAGGAAGCGTTCGCGCT CCTAGGGGGAGTGGCAAAGGAGAAGATCCGGTGGCGTCTAAAACACGACG AAGAGGAGCGCCTCAAGCTCGCAAGAGCCTCAGGAGGCCACAGGGTACAA ACCGCCAAGCTGGGAGTACTGAAGGCACATGGGCAGTGGGTGCCGTACAA GGACAAAATGGGTAGGGGCATCTTCTACTACAACATGGTGCGGACTGCGT AGTACTTATGGTCAGCTGATCCGTGGGGATTAATTTGAAGTCGCAGCAAA AACCTAGGTACTAGGAGGAGGAGTTCTGTCTATCGATGTATCGACGTAAG TTCTTTAAATACATACCCCACTCAACAAACTGAAAGGAAAAGCTTTGTGG GGCGCGTTTCGACATCGTTGTTCACAAAGAGACAACATGCCGTACATCAC GCAGTGCACGAGTGTTTGGATCCCTTCATGCCACCGCACAGTAATTTGAT TATGATATATCATAGGATATCGCAAGCTCCAAACACTGCCTTGTGCTAAC GAATAGCTTACCACGTTTATCCGTCTTGAGATGTCAAGGTATCGAGAGAA TCCAGATGGCAGGCCCCCGAAGACTACGCCAAGGACAAAGATTACGTCAT GAACGCAGCGACATTTGGGATGCACTTCTACCATTGA
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Coding sequence (CDS) from alignment at F-distichus_contig10291:4152..8288+

>mRNA_F-distichus_contig10291.257.1 ID=mRNA_F-distichus_contig10291.257.1|Name=mRNA_F-distichus_contig10291.257.1|organism=Fucus distichus monoicous|type=CDS|length=2268bp|location=Sequence derived from alignment at F-distichus_contig10291:4152..8288+ (Fucus distichus monoicous)
ATGGTCGCTTTACAGGCGAAGCGGCACCACCGAATGAAGGTCAGCGTGAA
CTCAGACGATCCGGTCCAAGCGAAGCTCAACAAAACGCCCTTGGCGATCT
CGCTTGGGAATATGCGACTTCTCCGAGAGACCGTGATAATGAAGTGGAAG
GACATCAACCGTAGCTATCAAGGGGCTTTACTCGGGGATACTTTGCTCCA
TCTAGTGTGCCGAGAAGGATGGTCGCTTTACAGGCGAAGCGGCACCACCG
AATGAAGGTCAGCGTGAACTCAGACGATCCGGTCCAAGCGAAGCTCAACA
AAACGCCCTTGGCGATCTCGCTTGGGAATATGCGACTTCTCCGAGAGACC
GTGATAATGAAGTGGAAGGACATCAACCGTAGCTATCAAGGGGCTTTACT
CGGGGATACTTTGCTCCATCTAGTGTGCCGAGAAGGGTATCTCGGGGCTC
TTAAATTCATGGTTGACCCGAATTCGAAGCCAAGCTCCGAAACGGAGAAG
CTCGACCCGAACAAAGTCAACAAGCAAAAACGGACACCGCTGATGCTGTG
CTTCTCAAGCCCACAATTAACCACGACCGCAAACAACTTCGGTCTCATGA
AAGATCCGGAAACTGGACTCGCAATTGCTCGTGCAAAATATCCGGATTCA
GGACAGGTATCTCGGGGCTCTTAAATTCATGGTTGACCCGAATTCGAAGC
CAAGCTCCGAAACGGAGAAGCTCGACCCGAACAAAGTCAACAAGCAAAAA
CGGACACCGCTGATGCTGTGCTTCTCAAGCCCACAATTAACCACGACCGC
AAACAACTTCGGTCTCATGAAAGATCCGGAAACTGGACTCGCAATTGCTC
GTGCAAAATATCCGGATTCAGGACAGACGCCACAGGATTGGATGAAGCCG
GGGACTCGAGCTGACCGCGAGGAGATGGTACGCATTCTGGTGAAAGACGT
GAAAGCTAGCGTGACCGTGCTCGACATTCACGACTACAGACGCCACAGGA
TTGGATGAAGCCGGGGACTCGAGCTGACCGCGAGGAGATGGTACGCATTC
TGGTGAAAGACGTGAAAGCTAGCGTGACCGTGCTCGACATTCACGACTAC
AGCTTGTTGCACTACGCGGCTATAAGTGGATGGGAGGGCACGATCAAACT
GCTCCTGGAACATGGCGTGGACCCTCGACAGACTTGCTCGACGGGAGAAA
CGGCGTTGGATTTTGCCGTCTTATTACGCCACAGAAAGGCGGCCGGAGAA
CTTTTGAAAGGCTGTCCGGACCTCGTCGATGAAGCTGATAAGCTTGTTGC
ACTACGCGGCTATAAGTGGATGGGAGGGCACGATCAAACTGCTCCTGGAA
CATGGCGTGGACCCTCGACAGACTTGCTCGACGGGAGAAACGGCGTTGGA
TTTTGCCGTCTTATTACGCCACAGAAAGGCGGCCGGAGAACTTTTGAAAG
GCTGTCCGGACCTCGTCGATGAAGCTGATAAGGACGGCAATCGGGCAATC
CACTTGGCCATTCAGAACCAAGATCAGGAGACCGTAAAACTCCTGAACGA
CTTTTCGGCGGACATTAACTCTCCCAACTACCTGAGAATCACGCCGCTAT
CCGTGGCATGCAAGCTTCAGGACTGGCAGATGGTTAACCTTCTCTTGGAT
TTGAAGGACGGCAATCGGGCAATCCACTTGGCCATTCAGAACCAAGATCA
GGAGACCGTAAAACTCCTGAACGACTTTTCGGCGGACATTAACTCTCCCA
ACTACCTGAGAATCACGCCGCTATCCGTGGCATGCAAGCTTCAGGACTGG
CAGATGGTTAACCTTCTCTTGGATTTGAAGCTCGCAAGAGCCTCAGGAGG
CCACAGGGTACAAACCGCCAAGCTGGGAGTACTGAAGGCACATGGGCAGT
GGGTGCCGTACAAGGACAAAATGGGTAGGGGCATCTTCTACTACAACATG
CTCGCAAGAGCCTCAGGAGGCCACAGGGTACAAACCGCCAAGCTGGGAGT
ACTGAAGGCACATGGGCAGTGGGTGCCGTACAAGGACAAAATGGGTAGGG
GCATCTTCTACTACAACATGGTATCGAGAGAATCCAGATGGCAGGCCCCC
GAAGACTACGCCAAGGACAAAGATTACGTCATGAACGCAGCGACATTTGG
GATGCACTTCTACCATTGAGTATCGAGAGAATCCAGATGGCAGGCCCCCG
AAGACTACGCCAAGGACAAAGATTACGTCATGAACGCAGCGACATTTGGG
ATGCACTTCTACCATTGA
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