mRNA_F-distichus_contig10286.250.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10286.250.1 vs. uniprot
Match: D7G286_ECTSI (Centrin-1, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G286_ECTSI) HSP 1 Score: 419 bits (1077), Expect = 1.570e-125 Identity = 304/723 (42.05%), Postives = 376/723 (52.01%), Query Frame = 1
Query: 1 FGVGGNKLVSATPSQSMTANFVGLVTRCLGRGIWVDQVASQLARPLDAILAYLPPEGAGLFVESGRQFILWGVSGGSNGDGN-PFEDDTLAGGQSQTETMTKGEAPITAATVAKVKVETNIRGSSGXXXXXXXXXXXXXXHPRQRRSVSTNISSSSSFFSLTATMNKGGPTAEVPGAVWIGRIAAVMETRGDKDEAVRLYGEASAAVTTVEEPASSVGRSGWERCRQEEEGAITHVGCIFGDGGGSDNSDHPAGVYGKCMNNRGSRNLFPYSARVHHLASMIERAYERHFRRRTAAQVRVAAAFRGFLVRAGRRLDQRHKDRAAGVXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRR-REWLLLVKARVTVVQSRARVLLAKKKVRRMRLEKATATLLQALQRGQAVRGARAAAIADIQAELWRAALGMNRVERGFLHRRFAAMVRQLAVDREIERSEAEAELIAGAKIVAIARVGVYLATAAGKMDLAREVRRAKAAAMSAKIRMRTASPAERRRRSALDTFDSFDIDGSGTIDISELKPLLGALMDVHLTDAELE--------------------AW------------------------------------------------------------------------------HSFREAVDLDIQERARRAVTRRWVSAVARGAQARFRKARPPPLECCACQHAFALYGDYWRHLGGGK 1869
FG+GG+ L PS+SMTANFVGL+ LG G+W D VASQLARPL+A+LAYLPPEGA LF ESGR+F G G + N P +++ A + + K A T + +K G P + + + +++ LT TM +G E P AVW+G++AAVME RGD+DEAVRLYGEA+A +T E AS +G R G + G G + GV +LFPYSAR H+LAS+IER Y RHF RRTAAQ AAAFRG L R G R D+ H+ AA GRR+ RE +L++ ++ QS R+ LAK+ +RMRLE+A+A LLQAL RG +R RA AI++I LWRAALG+NRV RGFLHRRFA MVRQ AVD EI R EAEA + GA +A R +YL T AGK++LA+E+RRAKAA + KI MR ASP ERRR SA D FDSFD+DGSGTID +ELK LLGAL V +T+AEL+ AW + R A + +Q+RARR+V RRWVS AR AQ RFR+A PP LEC AC AFALYGDYWRH GGG+
Sbjct: 319 FGLGGDALEPTPPSESMTANFVGLLEGSLGLGVWTDPVASQLARPLNAVLAYLPPEGARLFDESGRRFTPPG--GSHEAEANLPPDNEPSAAHATSPDGRKKKTAXXXXXTTSGIKAAPTGAGRG----------------PTTQGAACISAPGTAASSLLTVTMERG-TAEEAPRAVWLGQVAAVMEARGDRDEAVRLYGEAAAELTGKREGASRIGS------RDGSGGTASPCPPAAGKGRSAQLGGGDRGVGAGA-----GPDLFPYSARAHYLASIIERTYRRHFLRRTAAQTLAAAAFRGHLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIIRGAHGRRKAREIRILIRHTISA-QSVVRMFLAKRTTQRMRLEEASAGLLQALHRGFVLRRVRATAISEIHTSLWRAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLTTDAGKVELAQEMRRAKAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGAL-GVGITNAELKVTSAAVDADGSGEISFSEFYAWFGGGGFHGGGDYGVGEALGFRGMTSDTSENWSLRSSPSLSTARSGMEESTAALTSGYRSAEGNGGPRHTARATFVKARRNLRAATGMALQDRARRSVIRRWVSLAAREAQVRFREAWPPTLECWACHQAFALYGDYWRHFGGGR 1009
BLAST of mRNA_F-distichus_contig10286.250.1 vs. uniprot
Match: A0A067C2L8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C2L8_SAPPC) HSP 1 Score: 62.0 bits (149), Expect = 3.450e-6 Identity = 108/396 (27.27%), Postives = 156/396 (39.39%), Query Frame = 1
Query: 802 FPYSARVHHLASMIERAYERHFRRRTAAQVRVAAAFRGFLVRAGRRLDQRHKDRAAGVXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRRREWLLLVKARVTV---VQSRARVLLAKKKVRRMRLEKATATLLQALQRGQAVRGARAAAIADIQAELWRAALGMNRVERGFLHRRFAAMVRQLAVDREIERSEAEAELIAGAKIVAIARVGVYLATAAGKMDLAREVRRAKAAAMSAKIRMRTASPAERRRRSALDTFDSFDIDGSGTIDISELKPLLGAL---MD-------VHLTDA------ELEAWHSFREA-------------VDLDIQE------------RARRAVTRRWVSAVARGAQARFRKARPPPLECCACQHAFALYGDYWRHL 1857
F Y+ VH AS+++ Y R RR A +R+ +RGF R RR +R R A +R W + + + +Q+ AR LA VRRMR KA L ++ AR I RAA + R+ RGFL RR +R V E+ RS EA+ I + + ++L A G+ + + +R K A + K +PA RR + D F S+D+DGSGTID+ EL+ L L MD + L D ++ + ++ EA L +Q ARR + A+ + FR P C C AFALY +WRH+
Sbjct: 371 FNYTLEVHAKASLLQMRYRRRHLRRARAALRLQTVWRGFHDR--RRFKRRLWHRQASALYI---------------------------QRWWHVRTADKEAMRLRLQTAARRKLAYLLVRRMR--KAHKVLRASIHAWLVCALARLRLRRAI-----RAATNIQRLVRGFLSRRAVLRLRDRIVRDEVARSSREADYIQRFTAIRLEDFLLFLHQA-GQSHVHQLAQRLKDEATARKRARAHWAPAAMRRAALEDLFASYDVDGSGTIDVDELQHLFDELCIPMDAASLAQAIRLMDTSRNGSVDMSEFCAYLEAPPPQSNAGLWKLHAQLQLQRVANWFTSATFKNEARRRLVYDETQRQAQLLRTEFRMTEHPRFACPYCGAAFALYRPFWRHM 729 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10286.250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10286.250.1 >prot_F-distichus_contig10286.250.1 ID=prot_F-distichus_contig10286.250.1|Name=mRNA_F-distichus_contig10286.250.1|organism=Fucus distichus monoicous|type=polypeptide|length=623bp FGVGGNKLVSATPSQSMTANFVGLVTRCLGRGIWVDQVASQLARPLDAILback to top mRNA from alignment at F-distichus_contig10286:3090..10600- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10286.250.1 ID=mRNA_F-distichus_contig10286.250.1|Name=mRNA_F-distichus_contig10286.250.1|organism=Fucus distichus monoicous|type=mRNA|length=7511bp|location=Sequence derived from alignment at F-distichus_contig10286:3090..10600- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10286:3090..10600- >mRNA_F-distichus_contig10286.250.1 ID=mRNA_F-distichus_contig10286.250.1|Name=mRNA_F-distichus_contig10286.250.1|organism=Fucus distichus monoicous|type=CDS|length=3738bp|location=Sequence derived from alignment at F-distichus_contig10286:3090..10600- (Fucus distichus monoicous)back to top |