mRNA_F-distichus_contig10278.244.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10278.244.1 vs. uniprot
Match: A0A6H5JJF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJF1_9PHAE) HSP 1 Score: 106 bits (265), Expect = 2.470e-22 Identity = 60/132 (45.45%), Postives = 86/132 (65.15%), Query Frame = 1
Query: 61 GKDGKEDRLTAR-EIFDREVAWLRSSHALVAEISTPSTSVGFKIALMTHQRFKPCLGLIRKSTDDNGKDSQSTASALSPMLRGSANLEIHEYTEPSDIDEILDEWIDRRILRKRDRDDSRRGGRRGRGDSRE 453
G+ +++R+ A E++ R++ WLRS+H +VAE+STPS VG+KIALM HQR KPCL L K+ G+ +T + L ML G NL+IHEY++ S+ID I+ WI+++ K RGGR GDSR+
Sbjct: 663 GRPEEDERVEADVEVYRRDMRWLRSAHGMVAEVSTPSLGVGYKIALMIHQRCKPCLCLFNKNKG-RGEGDPATVNVLPHMLTGDKNLDIHEYSDVSEIDAIVAGWIEKQFPNKGPNSRRTRGGR---GDSRD 790
BLAST of mRNA_F-distichus_contig10278.244.1 vs. uniprot
Match: A0A0G1BJM2_9BACT (Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 n=4 Tax=Parcubacteria group TaxID=1794811 RepID=A0A0G1BJM2_9BACT) HSP 1 Score: 64.7 bits (156), Expect = 1.810e-9 Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 1
Query: 85 LTAREIFDREVAWLRSSHALVAEISTPSTSVGFKIALMTHQRFKPCLGLIRKSTDDNGKDSQSTASALSPMLRGSANLEIHEYTEPSDIDEILDEWI 375
+T +EIFDR++ WLRS+ LVAE++TPS VG++IA ++ R KP L L RK GK +S M+ G L + Y +D+ EIL E+
Sbjct: 48 MTDKEIFDRDMDWLRSADVLVAEVTTPSLGVGYEIAAASNIR-KPVLCLYRKVP---GKK-------ISAMINGDTKLTVKIYKTVADLPEILKEFF 133
BLAST of mRNA_F-distichus_contig10278.244.1 vs. uniprot
Match: A0A5A8DFG6_CAFRO (Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DFG6_CAFRO) HSP 1 Score: 60.8 bits (146), Expect = 6.860e-8 Identity = 34/85 (40.00%), Postives = 50/85 (58.82%), Query Frame = 1
Query: 85 LTAREIFDREVAWLRSSHALVAEISTPSTSVGFKIALMTHQRFKPCLGLIRKSTDDNGKDSQSTASALSPMLRGSANLEIHEYTE 339
LT ++IF+R++AWLRSS A+VAE + PS VG+++ L P L L R S + + LS MLRG++ +HEY +
Sbjct: 60 LTEQQIFERDMAWLRSSDAVVAECTVPSLGVGYELGLAESLGI-PVLVLFRPSAERS----------LSAMLRGNSKFTVHEYAD 133
BLAST of mRNA_F-distichus_contig10278.244.1 vs. uniprot
Match: A0A660X7L8_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A660X7L8_9BACT) HSP 1 Score: 60.8 bits (146), Expect = 8.610e-8 Identity = 32/107 (29.91%), Postives = 60/107 (56.07%), Query Frame = 1
Query: 70 GKEDRLTAREIFDREVAWLRSSHALVAEISTPSTSVGFKIALMTHQRFKPCLGLIRKSTDDNGKDSQSTASALSPMLRGSANLEIHEYTEPSDIDEILDEWIDRRIL 390
G E +L+ REIF R++ WL+ + L+AE++TPS VG++IA+ +R++ + Q LS ++ G+ + +H YT+P ++ ++ ++R IL
Sbjct: 67 GGEKKLSNREIFYRDLDWLKKADCLIAEVTTPSLGVGYEIAVG-----------VRRNISVHALFQQKDDRRLSALVSGNPGVTVHSYTKPEELVPLIRSIMERNIL 162
BLAST of mRNA_F-distichus_contig10278.244.1 vs. uniprot
Match: A0A117LL14_9BACT (Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 n=3 Tax=Candidatus Marinimicrobia TaxID=62680 RepID=A0A117LL14_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 5.250e-7 Identity = 33/94 (35.11%), Postives = 54/94 (57.45%), Query Frame = 1
Query: 70 GKEDRLTAREIFDREVAWLRSSHALVAEISTPSTSVGFKIALMTHQRFKPCLGLIRKSTDDNGKDSQSTASALSPMLRGSANLEIHEYTEPSDI 351
G E + REIFDR++AWL+ + L+AE++TPS VG++IA+ + P +K KDS+ LS ++ G+ + +H YTE ++
Sbjct: 45 GGEKNQSNREIFDRDLAWLKKADCLIAEVTTPSLGVGYEIAVGVRRNI-PVHAFFQK------KDSRR----LSALVSGNPGVTLHTYTESDEL 127
BLAST of mRNA_F-distichus_contig10278.244.1 vs. uniprot
Match: A0A7Y2YTH4_9BACT (Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2YTH4_9BACT) HSP 1 Score: 56.6 bits (135), Expect = 2.180e-6 Identity = 38/103 (36.89%), Postives = 54/103 (52.43%), Query Frame = 1
Query: 58 DGKDGKEDRLTAREIFDREVAWLRSSHALVAEISTPSTSVGFKIALMTHQRFKPCLGLIRKSTDDNGKDSQSTASALSPMLRGSANLEIHEYTEPSDIDEILD 366
D DG E+ REI+ R+VAWLR + ++AE+STPS VGF++A K + L R ++ LS M+RG+ + I EY E D E+ D
Sbjct: 46 DLSDGGEEGPGDREIYARDVAWLREADVVIAEVSTPSLGVGFEVARAAVMG-KRIVCLFRTESERR----------LSAMIRGNPAVRILEYGETDDPRELAD 137
BLAST of mRNA_F-distichus_contig10278.244.1 vs. uniprot
Match: UPI000F65660A (nucleoside 2-deoxyribosyltransferase n=1 Tax=Dickeya lacustris TaxID=2259638 RepID=UPI000F65660A) HSP 1 Score: 55.5 bits (132), Expect = 6.580e-6 Identity = 34/95 (35.79%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 85 LTAREIFDREVAWLRSSHALVAEISTPSTSVGFKIALMTHQRFKPCLGLIRKSTDDNGKDSQSTASALSPMLRGSANLEIHEYTEPSDIDEILDE 369
L+ + I DR++ WLR SH +VAE++TPS VG++IA R P + L RK+ + ++S M+ GS EY E SD I+++
Sbjct: 66 LSDKFIHDRDLHWLRHSHVVVAEVTTPSLGVGYEIATAIGWRI-PVITLYRKNNN-----------SVSAMISGSDGCRHFEYEEVSDAYNIIED 148
BLAST of mRNA_F-distichus_contig10278.244.1 vs. uniprot
Match: A0A1S3IJH6_LINUN (Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IJH6_LINUN) HSP 1 Score: 56.2 bits (134), Expect = 9.890e-6 Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 1
Query: 43 KDPERDGKDGKEDRLTAREIFDREVAWLRSSHALVAEISTPSTSVGFKIALMTHQRFKPCLGLIRKSTDDNGKDSQSTASALSPMLRGSANLEIHEYTEPSDIDEILDEWI 375
KDP++ +LT +EI+DR++AWL+ S A+VAE++ PS VG++I + K L L R S+ GK S ++ +S GS+ L Y + D+D I E+
Sbjct: 144 KDPDK--------KLTDKEIYDRDMAWLKQSDAIVAEVTQPSLGVGYEIG-RANAMGKKILCLFRPSS---GK---SLSAMISGAEGGSSKLINKSYEKLEDVDPIFSEFF 239
BLAST of mRNA_F-distichus_contig10278.244.1 vs. uniprot
Match: A0A554I7B7_9BACT (Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 n=1 Tax=Parcubacteria group bacterium LiPW_39 TaxID=2017205 RepID=A0A554I7B7_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 1.180e-5 Identity = 33/98 (33.67%), Postives = 55/98 (56.12%), Query Frame = 1
Query: 85 LTAREIFDREVAWLRSSHALVAEISTPSTSVGFKIALMTHQRF-KPCLGLIRKSTDDNGKDSQSTASALSPMLRGSANLEIHEYTEPSDIDEILDEWI 375
L +++IFDR++ WL+ + +AEI+ PST VG++IA + F K L + R +GK +S M+ G+ N+ + +Y + D EI DE+
Sbjct: 49 LDSKDIFDRDMKWLKEADVFIAEITVPSTGVGYEIACA--EAFGKKSLCIYRPQ---DGK-------RISAMVEGNRNVSVKKYKKIEDAKEIFDEFF 134
BLAST of mRNA_F-distichus_contig10278.244.1 vs. uniprot
Match: A0A3B9FLM2_9BACT (Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 n=2 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A3B9FLM2_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 1.200e-5 Identity = 33/93 (35.48%), Postives = 49/93 (52.69%), Query Frame = 1
Query: 97 EIFDREVAWLRSSHALVAEISTPSTSVGFKIALMTHQRFKPCLGLIRKSTDDNGKDSQSTASALSPMLRGSANLEIHEYTEPSDIDEILDEWI 375
EI+ R++ WL+S HA+VAE++TPS VG++I + + KP L L D+ T LS ML G+ N+E Y L E++
Sbjct: 54 EIYRRDLEWLKSCHAVVAEVTTPSLGVGYEIGV-AEKLGKPILCLF---------DAGQTEFTLSAMLSGNKNVEARRYQSMGQAKRHLAEFV 136 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10278.244.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10278.244.1 >prot_F-distichus_contig10278.244.1 ID=prot_F-distichus_contig10278.244.1|Name=mRNA_F-distichus_contig10278.244.1|organism=Fucus distichus monoicous|type=polypeptide|length=270bp GVVTVVNSGAESSIKDPERDGKDGKEDRLTAREIFDREVAWLRSSHALVAback to top mRNA from alignment at F-distichus_contig10278:8254..10495- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10278.244.1 ID=mRNA_F-distichus_contig10278.244.1|Name=mRNA_F-distichus_contig10278.244.1|organism=Fucus distichus monoicous|type=mRNA|length=2242bp|location=Sequence derived from alignment at F-distichus_contig10278:8254..10495- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10278:8254..10495- >mRNA_F-distichus_contig10278.244.1 ID=mRNA_F-distichus_contig10278.244.1|Name=mRNA_F-distichus_contig10278.244.1|organism=Fucus distichus monoicous|type=CDS|length=1620bp|location=Sequence derived from alignment at F-distichus_contig10278:8254..10495- (Fucus distichus monoicous)back to top |