mRNA_F-distichus_contig102223.193.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig102223.193.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE) HSP 1 Score: 381 bits (979), Expect = 7.650e-124 Identity = 221/457 (48.36%), Postives = 288/457 (63.02%), Query Frame = 1
Query: 1 DTPEARRVRASKLAHQRGGITKAASALISPPAAPQDSRTLATLRSKHPTEDPEAIATGKAQAERRAGITAVT-----------------VKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVQDLAAFATLVFS-SRVLPQVFWTLHTTANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQSWGQYGVAVSGGVEIMALTATLEFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKDFRANPLVPGARAVSFIDDITVILPPELSLDIAAIAKVTEWLQERL---GIE-----------GGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQDAVNGEPAELVRALVPMEDAQASFQILRLSATSRLSHLLRTAPPSIT 1272
DT + R+ RA++LAH+ GGITKAASALISP +P+++ TL LR+ HP EDP+ IAT + + AG T +K +KKANPQSA GP GLR+S+LQA + D + LA F+ VF LP FW LHT+ANLSALG+K RP+A G VLRR+I FC +Y +A+ F++ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+K+F P VPGA+ + ++DD+ V LPP L+ +I AIA VT W+Q+ L GIE G+ LT +++ + TGL+V GM +VGVPVGTE FQR F+ + G PAEL+R L ++D QAS+Q+LRLS RL HLLRT PSIT
Sbjct: 36 DTEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSIT 492
BLAST of mRNA_F-distichus_contig102223.193.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE) HSP 1 Score: 382 bits (980), Expect = 2.370e-121 Identity = 216/457 (47.26%), Postives = 287/457 (62.80%), Query Frame = 1
Query: 1 DTPEARRVRASKLAHQRGGITKAASALISPPAAPQDSRTLATLRSKHPTEDPEAIATGKAQAERRAGITAVT-----------------VKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVQDLAAFATLVFS-SRVLPQVFWTLHTTANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQSWGQYGVAVSGGVEIMALTATLEFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKDFRANPLVPGARAVSFIDDITVILPPELSLDIAAIAKVTEWLQERLGIEG--------------GVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQDAVNGEPAELVRALVPMEDAQASFQILRLSATSRLSHLLRTAPPSIT 1272
DT + R+ RA++LAH+ GGITKAASALISP +P+++ TL LR+ HP EDP+ IAT + + AG T +K +KKANPQSA GP GLR+S+LQA + D + LA F+ VF LP FW LHT+ANLSALG+K RP+A G VLRR+I FCR+Y +A+ F++ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+K+F P VPG + + ++DD+ LPP L+ ++ AI+ VT W+QERL +G G+ LT +++ + GL+V GM VVG+PVGTE+FQR+F+ G+PAEL+ L ++D QAS+Q+LRLS RL HLLRT PSIT
Sbjct: 36 DTEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSIT 492
BLAST of mRNA_F-distichus_contig102223.193.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN) HSP 1 Score: 395 bits (1016), Expect = 2.150e-120 Identity = 210/445 (47.19%), Postives = 288/445 (64.72%), Query Frame = 1
Query: 25 RASKLAHQRGGITKAASALISPPAAPQDSRTLATLRSKHPTEDPEAIATGKAQAERRA-----GITAV----------TVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVQDLAAFATLVFSSRVLPQVFWTLHTTANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQSWGQYGVAVSGGVEIMALTATLEFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKDFRANPLVPGARAVSFIDDITVILPPELSLDIAAIAKVTEWLQERLGIEG--------------GVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQDAVNGEPAELVRALVPMEDAQASFQILRLSATSRLSHLLRTAPPSIT 1272
RA LAHQRGG++KAAS L++PP+ P+++ TL TLR KHP E + IA +A R G++ + TV A I++ NPQ + GPSGLR+S LQ++L EL + +A +++F LP FW LHT+ANLSA+G K RP+A GD+ RR++G V CR+YG LA++F+ GQYGVAV GG E++A A L ++G +L+YD NAFNS+ R LPALA+++P ++PYA+N+YAREPPKLL+ D G V+ SA GVQQGCNLGPLCYSAG LK+L+DFRANP V GA+ ++FIDD+ V+LP + + AA VT W+Q + G G + E+ R ++ T L V GMR+VGVPVG + + D GEP +L++ + ++DAQAS QILR SA +RL+ LLR+ PP +T
Sbjct: 1084 RAEHLAHQRGGLSKAASTLLAPPSPPRNAETLETLRKKHPGESQQEIAEACCEATARLSRPPPGVSRIEAVEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSG-MAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLT 1527
BLAST of mRNA_F-distichus_contig102223.193.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE) HSP 1 Score: 382 bits (981), Expect = 2.680e-119 Identity = 216/457 (47.26%), Postives = 287/457 (62.80%), Query Frame = 1
Query: 1 DTPEARRVRASKLAHQRGGITKAASALISPPAAPQDSRTLATLRSKHPTEDPEAIATGKAQAERRAGITAVT-----------------VKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVQDLAAFATLVFS-SRVLPQVFWTLHTTANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQSWGQYGVAVSGGVEIMALTATLEFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKDFRANPLVPGARAVSFIDDITVILPPELSLDIAAIAKVTEWLQERLGIEG--------------GVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQDAVNGEPAELVRALVPMEDAQASFQILRLSATSRLSHLLRTAPPSIT 1272
DT + R+ RA++LAH+ GGITKAASALISP +P+++ TL LR+ HP EDP+ IAT + + AG T +K +KKANPQSA GP GLR+S+LQA + D + LA F+ VF LP FW LHT+ANLSALG+K RP+A G VLRR+I FCR+Y +A+ F++ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+K+F P VPG + + ++DD+ LPP L+ ++ AI+ VT W+QERL +G G+ LT +++ + GL+V GM VVG+PVGTE+FQR+F+ G+PAEL+ L ++D QAS+Q+LRLS RL HLLRT PSIT
Sbjct: 36 DTEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKVAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSIT 492
BLAST of mRNA_F-distichus_contig102223.193.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE) HSP 1 Score: 301 bits (772), Expect = 1.080e-95 Identity = 170/351 (48.43%), Postives = 225/351 (64.10%), Query Frame = 1
Query: 1 DTPEARRVRASKLAHQRGGITKAASALISPPAAPQDSRTLATLRSKHPTEDPEAIATGKAQAERRAGITAVT-----------------VKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVQDLAAFATLVFS-SRVLPQVFWTLHTTANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQSWGQYGVAVSGGVEIMALTATLEFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKDFRANPLVPGARAVSFIDDITVILPPELSLDIAAIAKVTEWLQERLGIEG 996
DT + R+ RA++LAH+ GGITKAASALISP +P+++ TL LR+ HP EDP+ IAT + + AG T +K +KKANPQSA GP GLR+S+LQA + D + LA F+ VF LP FW LHT+ANLSALG+K RP+A G VLRR+I FCR+Y +A+ F++ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+K+F P VPG + + ++DD+ LPP L+ ++ AI+ VT W+QERL +G
Sbjct: 36 DTEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIETHKIDSVAEPDEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKG 386
BLAST of mRNA_F-distichus_contig102223.193.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE) HSP 1 Score: 298 bits (764), Expect = 3.720e-93 Identity = 163/340 (47.94%), Postives = 214/340 (62.94%), Query Frame = 1
Query: 298 LCDELVQDLAAFATLVFS-SRVLPQVFWTLHTTANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQSWGQYGVAVSGGVEIMALTATLEFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKDFRANPLVPGARAVSFIDDITVILPPELSLDIAAIAKVTEWLQERL---GIE-----------GGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQDAVNGEPAELVRALVPMEDAQASFQILRLSATSRLSHLLRTAPPSIT 1272
+ D + LA F+ VF LP FW LHT+ANLSALG+K RP+A G VLRR+I FCR+Y +A+ F++ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P + Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+K+F P VPGA+ + ++DD+ V LPP L+ +I AIA VT W+Q+ L GIE G+ LT +++ + TGL+V GM +VGVPVGTE FQR F+ + G PAEL+ L ++D Q S+Q+LR+S RL HLLRT PSIT
Sbjct: 1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSIT 340
BLAST of mRNA_F-distichus_contig102223.193.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE) HSP 1 Score: 301 bits (770), Expect = 2.410e-88 Identity = 159/340 (46.76%), Postives = 214/340 (62.94%), Query Frame = 1
Query: 298 LCDELVQDLAAFATLVFS-SRVLPQVFWTLHTTANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQSWGQYGVAVSGGVEIMALTATLEFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKDFRANPLVPGARAVSFIDDITVILPPELSLDIAAIAKVTEWLQERLGIEG--------------GVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQDAVNGEPAELVRALVPMEDAQASFQILRLSATSRLSHLLRTAPPSIT 1272
+ D + LA F+ VF LP W LHT+ANLSALG+K RP+A G VLRR+I F R+Y +A+ F++ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A + P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+K+F P VPG + + ++DD+ LPP L+ ++ AI+ VT W+QERL +G G+ LT +++ + GL+V GM VVG+PVGTE+FQR+F+ G+PAEL+ L ++D QAS+Q+LRLS RL HLLRT PSIT
Sbjct: 1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSIT 340
BLAST of mRNA_F-distichus_contig102223.193.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 181 bits (460), Expect = 3.210e-46 Identity = 137/455 (30.11%), Postives = 220/455 (48.35%), Query Frame = 1
Query: 1 DTPEARRVRASKLAHQRGGITKAASALISPPAAPQDSRTLATLRSKHPTEDPEAIATGKAQA------ERRAG----------ITAVTVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVQD------LAAFATLVFSSRVLPQVFWTLHTTANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQSWGQYGVAVSGGVEIMALTATLEFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKDFRANPLVPGARAVSFIDDITVILPPELSLDIAAIAKVTEWLQERLGI------EGGVGP--EQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQDAVNGEPAELVRALVP-MEDAQASFQILRLSATSRLSHLLRTAPPSIT 1272
+T E + RA + GG+ AA AL++ P +P + T L++K P ED A+ A A E G + VI + S AG G R+SHL++ ++ ++ + + LV P FWTL ++L ALG+K RPV G RR+I A R++ KL + F+ Q+GVAV+GGVE +A+ A L + G I+ D +NAFN+ R + A+ +P +V Y + Y P ++ +D G +E GVQQG +GP +S + I+ + G +++DDIT+ L + A+ + + L E +GI + P +T++QR ++ GLTV +G+ VVGVP+GT+ + R+F + AE + ++P M D Q + I LS R +++ R P++T
Sbjct: 455 ETQEDKFKRAEQACRHSGGVKDAARALLAEPRSPGNDETWERLKAKFPLEDSAAVEQAVADAIAESITEEENGSAPRWRPEEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAE-VGIVVNRAKSSALPPPGHMITDQQRRLLEGVGLTVAGEGITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDPTLT 908
BLAST of mRNA_F-distichus_contig102223.193.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE) HSP 1 Score: 179 bits (454), Expect = 1.670e-45 Identity = 135/448 (30.13%), Postives = 215/448 (47.99%), Query Frame = 1
Query: 1 DTPEARRVRASKLAHQRGGITKAASALISPPAAPQDSRTLATLRSKHPTEDP--------EAIATGKAQAERRAG--------ITAVTVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVQD------LAAFATLVFSSRVLPQVFWTLHTTANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQSWGQYGVAVSGGVEIMALTATLEFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKDFRANPLVPGARAVSFIDDITVILPPELSLDIAAIAKVTEWLQERLGIEGGVGPEQ--------LTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQDAVN-GEPAELVRALVPMEDAQASFQILRLSATSRLSHLLR 1251
DTP+ + RA++ GG+ AA AL++ +P + T A L++K P EDP EAIA + + E + + VI + S AG G R+SHL++ + ++ ++ + + L+ P FWTL ++L ALG+K RPV G RR+I A R + KL + F+ Q+GVAV+GGVE +A+ A L + G ++ D +NAFN+ R + A+ VP +V Y + Y P K ++A+D G +E GVQQG +GP + + I+ RA G +++DDI++ + +I I + + L E +GI G +T +R + GL + +G+ VVGVP+GT+ + D + G +L R LV M D Q + + S T R ++ R
Sbjct: 285 DTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDEL-EAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIER 731
BLAST of mRNA_F-distichus_contig102223.193.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE) HSP 1 Score: 166 bits (420), Expect = 9.660e-45 Identity = 92/191 (48.17%), Postives = 121/191 (63.35%), Query Frame = 1
Query: 742 LDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKDFRANPLVPGARAVSFIDDITVILPPELSLDIAAIAKVTEWLQERL---GIEGGVG------PE-----QLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQDAVNGEPAELVRALVPMEDAQASFQILRLSATSRLSHLLRTAPPSIT 1272
++ G E+V S RGVQQGCNLG +S G L +K+F P VPGA+ + ++DD+ V LPP L+ +I AIA VT W+Q+ L GIE + PE LT +++ + TGL+V GM +VGVPVGTE FQR F+ + G PAEL+R L ++D QAS+Q+LRLS RL HLLRT PSIT
Sbjct: 1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSIT 191 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102223.193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig102223.193.1 >prot_F-distichus_contig102223.193.1 ID=prot_F-distichus_contig102223.193.1|Name=mRNA_F-distichus_contig102223.193.1|organism=Fucus distichus monoicous|type=polypeptide|length=426bp DTPEARRVRASKLAHQRGGITKAASALISPPAAPQDSRTLATLRSKHPTEback to top mRNA from alignment at F-distichus_contig102223:236..1645- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig102223.193.1 ID=mRNA_F-distichus_contig102223.193.1|Name=mRNA_F-distichus_contig102223.193.1|organism=Fucus distichus monoicous|type=mRNA|length=1410bp|location=Sequence derived from alignment at F-distichus_contig102223:236..1645- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig102223:236..1645- >mRNA_F-distichus_contig102223.193.1 ID=mRNA_F-distichus_contig102223.193.1|Name=mRNA_F-distichus_contig102223.193.1|organism=Fucus distichus monoicous|type=CDS|length=2556bp|location=Sequence derived from alignment at F-distichus_contig102223:236..1645- (Fucus distichus monoicous)back to top |