mRNA_F-distichus_contig1022.190.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: D7G2L8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2L8_ECTSI) HSP 1 Score: 323 bits (827), Expect = 1.320e-98 Identity = 203/382 (53.14%), Postives = 243/382 (63.61%), Query Frame = 1
Query: 85 MRGIVAAAVAEPR---HAFPRCQRCG---LFVNRAHRVRFRSYTPKTAAPRITAAAGSAAATNTKENMLPPRRPMVVKCAYVAFCACFGTLARLYTDEI-QSSNVALQGSFLSNSIGSFALGVLEASDLNEEHLGGLYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKGS-TGGIFAAVSMVQTLAFFAVCYVAGRDLVKTLAENGR---------GRWRAGENGSRATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGATGSD--LSGWSGIVLKGFQGGFLGSFTTMSTFMKEVVGNRTSHGVAWSCLYLAATVATALVLVLVVGAVL 1173
MR AAAV P + RCQ CG LF+ R + R P TA TA + S T+ MLP R PMV KCAY++FCACFGTLARLYTD+I +SNVALQGSFL+NSIGSFALG L +S E +Y GLTVG CGSYTT+SGWNLRI R ALG G+ +G I VSM +LAFFA C+ AG D++K +A +GR G AG + G V Y+++A+LL VD+N +RRI W+A + APFGAL RFFLS QLN LR GAFP GT+ ANVLGSL +AL+ YG S SGWS + +K FQ GFLGS TTMSTFM EVVG+R H + S +YLAAT A LVL+VGA+L
Sbjct: 1 MRSRAAAAVTSPAATPNTSRRCQHCGSSLLFIQRVFQTHHRK--PPTA----TATSNSNPGNKTEMTMLPGR-PMVAKCAYISFCACFGTLARLYTDDIGPASNVALQGSFLANSIGSFALGALASSPDRETIPDAMYAGLTVGFCGSYTTYSGWNLRIARAALGQVSGAPSGAIVTIVSMATSLAFFAACFSAGCDVMKQIASHGRRLNIRRMLGGGALAGGDSDAVRNTLGMLGAV---YVLLAVLLGVDNNWSRRIDWLACIFAPFGALSRFFLSRQLNSRLRGGAFPLGTFTANVLGSLVMALSFYGTKNSSSLTSGWSNVAIKAFQTGFLGSLTTMSTFMSEVVGHRDRHTPSASYIYLAATAIAAQALVLIVGAML 372
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: H2Y779_CIOSA (Uncharacterized protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Y779_CIOSA) HSP 1 Score: 124 bits (310), Expect = 8.600e-28 Identity = 92/260 (35.38%), Postives = 130/260 (50.00%), Query Frame = 1
Query: 331 GTLARLYTDEI-------QSSNVALQGSFLSNSIGSFALGVLEASDLNEEHLGGLYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKG-STGGIFAAVSMVQTLAFFAVCYVAGRDLVKTLAENGRGRWRAGENGSRATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGAT-----GSDLSGWSGIVLKGFQGGFLGSFTTMSTFMKEV 1071
G L R+ TD+I +SS + SF+SN +GSF LG L AS + LG +Y GLT G CGSYTT+S WN ++ +G A S + + +S F Y G D K + GR + NG + + F +V I + + VD +T + W+A + APFGA +R +L+ + + FP GT+LAN+LG+L LA + T GS WS +V G GF TT+STFM E+
Sbjct: 3 GCLCRIGTDQIFGKLAKIESSAAVVNLSFVSNMVGSFVLGALNASPMGSTRLGAMYKGLTTGFCGSYTTWSKWNQQLSLTLVGGANAASQSQVLSILSWFVGFHSFIGSYCVGLDFGKDIG--GRIGKKVSPNGPKISNI-AVFLLLVGAVIGFIVGVVVDPTQTGKQIWMAVLFAPFGASIRAYLAKYKVDRFK---FPLGTFLANLLGALVLAAINVINTRAVTCGSGAICWSTVVTYGVGTGFCACLTTVSTFMSEI 256
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: A0A836C7N9_9STRA (CrcB-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7N9_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.160e-26 Identity = 108/328 (32.93%), Postives = 155/328 (47.26%), Query Frame = 1
Query: 253 NTKENMLPPRRP------MVVKCAYVAFCACFGTLARLYTDEIQSSNVA--------LQGSFLSNSIGSFALGVLEASDLNEEHLGG---LYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKGSTGGIFAAVSMV-QTLAFFAVCYVAGRDLVKTLAENGRGRWRAGENGSRATTAWGAFAGVVTVY---------IIMAILLYVDDNR-TRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGATGSDLSGWSGIVLKGFQGGFLGSFTTMSTFMKEVVGNRTSHGVAWSCLYLAATVATALVLV 1152
+T+EN+ P +P +V VA A G AR++T+ + S A L SF N GS LG L A+ GG L TG++VGLCG+YTTFS W L+ + + AA+ + ++A F V + G D+ L G+ A G G++ + I ++I L V+DN + YW++G+ A GA LR+ L+ Q N+ R G FP GT+LAN+ G+LA AL ++ T S W + F GF S TTMST + E+ R H V +YLA+TV A +V
Sbjct: 77 STEENLKQPPQPQPQEPSVVNLYVSVALWAIAGCYARIFTERLFGSTAADVIDADTLLVPSFFDNVAGSMILGFLVAASTTMSKGGGALVLLTGMSVGLCGAYTTFSAWTLQTNALLIAPTSDVPQPQIAALCYIFASIATFIVAHRVGADVGALLT------------GAVQKAAPGISEGIIAIVNGVLLVATAIGLSIALGVNDNSWLEKRYWLSGLFAIPGASLRYALARQFNK-FRGGRFPLGTFLANIGGTLACALVTHEFT--KASDWDDTAARAFVTGFCASLTTMSTLVNELAILRRDHSVQDGVIYLASTVILAQFIV 389
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: F6XSK1_CIOIN (Fluoride export protein 2 n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6XSK1_CIOIN) HSP 1 Score: 123 bits (308), Expect = 2.550e-26 Identity = 96/285 (33.68%), Postives = 132/285 (46.32%), Query Frame = 1
Query: 274 PPRRPMVVKCAYVAFCACFGTLARLYTDEI-------QSSNVALQGSFLSNSIGSFALGVLEASDLNEEHLGGLYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKG-STGGIFAAVSMVQTLAFFAVCYVAGRDLVKTLAENGRGRWRAGENGSR------ATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASY-----GATGSDLSGWSGIVLKGFQGGFLGSFTTMSTFMKEV 1071
PP P ++AF A G L R+ TD+I ++S + SF+SN +GSF LG L AS + LG +Y GLT G CGSYTT+S WN ++ +G+ S + + VS F Y G D K + GR + NG + A + A AG + I+ D +T + W+A + APFGA +R +L+ E P GT LAN+LG+L LA GS W +V G GF TT+STFM E+
Sbjct: 94 PPTPPQWQLYMHIAFFAMCGCLCRIGTDKIFGTLAVIENSGEVVNLSFISNMVGSFVLGALNASPMGSTRLGAMYKGLTTGFCGSYTTWSKWNQQLSLALVGETNTVSQSQVLSIVSWFIGFHSFIGSYCVGLDFGKDVG--GRIGKKVSPNGPKISNIAVAVLLFSAAAGFIVGVIV-------DPTQTGKSIWMAVLFAPFGACIRAYLAKYKYERFM---LPLGTLLANLLGALVLAAIHVINVRAVTCGSGTICWGSVVTYGIGTGFCACLTTVSTFMSEI 366
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: A0A1Y2FQS7_PROLT (CrcB-like protein-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FQS7_PROLT) HSP 1 Score: 95.9 bits (237), Expect = 1.440e-17 Identity = 97/294 (32.99%), Postives = 139/294 (47.28%), Query Frame = 1
Query: 274 PPRRPMVV-KCAYVAFCACFGTLARLYTDEIQSSNVALQGSFL-SNSIGSFALGVLEASDL--NEEHLGGLYTGLTVGLCGSYTTFSGWNLRIGRVALGD-------AKGSTG--GIFAAVSMVQTLAFFAVCYVAGRDLVKTLAEN-GRGRWRAGENGSRATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGATGSDLSGWSGI---VLKGFQGGFLGSFTTMSTFMKEVVGNRTSHGVAW 1104
P R V+ +CA++ + GTL+RL E+ + L + + + +G +G L+ + L+TGLTVG CGS TTFSGW L AL D A STG I + TLAF V + G+ LA + R + +R A ++ +++A+ VD RR Y +A + P GALLR+ LS N R +FP GT+ AN+LG AL T D G +GI L+G Q GF G+ TT+S+F+ E+ + H AW
Sbjct: 18 PSRALQVIHECAWIGLLSLLGTLSRLALVELNTYPGNLIPALVWAQFVGCAVMGFLKHDQVFFQPNRHKALFTGLTVGFCGSLTTFSGWLLAC-FTALSDYGTSEASAGRSTGYNAIGLIAQLTTTLAFSIVGFKLGQHAADGLASIFPKARLTFPQATTRTAVCITALLALLAQAVVIAVAASVDHTSWRRRYTLALAMTPTGALLRYLLSQLFNH--RVLSFPLGTFNANILGCFLEALFFLLQTVVDRDG-AGIHFLALQGLQDGFCGALTTVSSFVSELHTLKRKH--AW 305
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: UPI00193A23B4 (fluoride export protein 1-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A23B4) HSP 1 Score: 93.2 bits (230), Expect = 1.710e-16 Identity = 85/276 (30.80%), Postives = 133/276 (48.19%), Query Frame = 1
Query: 358 EIQSSNVALQGSFLSNSIGSFALGVLEASDL-NEEHLGGLYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKGSTGGIFAAVSMVQTLAFFAVC-YVAGRDLVKTLAE-------NGRGRWRAGENGSRATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYW-VAGMLAPFGALLRFFLS---MQLNESLRNG---AFPAGTYLANVLGSLALALASYGATGSDL-SGWSGIVLKGFQGGFLGSFTTMSTFMKEVVGNRTSHGVAWSCLYLAATVA 1134
+I+S N + SF +N IGSF LG+L AS L N + +YTGL+ GLCGS TTFS +N ++ + +G A F A + + +C ++ G DL + + R R S++ + + + +I + +L V + IY + G+LAPFGA LRF LS + L+ G P GT+LAN +G+ +A + +++ W + Q GF TT+STF+ E+ R+ G+ S Y T+A
Sbjct: 69 QIESPNSIIFQSFFANMIGSFILGLLTASTLKNMSGMLPIYTGLSTGLCGSITTFSKFNQQVSEMIVGQAITIGNPYFTAFAAIILGIAAPICSFIFGHDLSLEIRKVVCVTDGTDFSRQRRSIKVSKSII-YISIPFFIISWITLLVLAIVYSHHQNIIYTCLCGVLAPFGATLRFILSKLNVNTRPCLKYGFLKRMPIGTFLANFIGATVMAFLNVILVWTNMWCPWKAF-FRALQSGFCACLTTVSTFVSEITSLRSKEGIFVSHCYAFLTIA 342
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: A0A1Y1V1F4_9FUNG (Uncharacterized protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1V1F4_9FUNG) HSP 1 Score: 90.9 bits (224), Expect = 4.240e-16 Identity = 79/266 (29.70%), Postives = 132/266 (49.62%), Query Frame = 1
Query: 310 VAFCACFGTLARLYTDEIQSSNVALQGSFLSNSIGSFALGVLEASDLNEEHLGG----LYTGLTVGLCGSYTTFSGWNLRIGR--------VALGDAKGSTGGIFAAVSMVQTLAFFAVCYVAGRDLVKTLAENGRGRWRAGENGSRATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGATGSDLSGWSGIVLKGFQGGFLGSFTTMSTFMKEV 1071
+A A G L R+ ++I+S L NSIG LG++ A + + G +Y GLT GLCGS TTFS WN+ + + + +G + VS+ A Y G+ L + E + + + +T + +AG+ +I+ ++L + D R++ W++ +LAPFGAL+R+FLS + N+ +N FP GT++AN++G+L LA+ + + + + GF G TT+STF E+
Sbjct: 12 IALFAIIGVLIRIELNKIESELFIHLPFILPNSIGCILLGLVNAF---KNTISGWQYAVYLGLTTGLCGSITTFSSWNMAVFKDIFNLPHFTSYSYRNICSGLLEIIVSLTAYTALIKFGYHIGKFLPFSNKEEVPTTIKREK--PKMSTKFFIYAGITAGLLILTLVLTIVDGDIRKV-WLSCLLAPFGALIRYFLSSK-NKMFQN--FPFGTFIANIMGTLCLAVFNILRYSLNHHEFLCHFITAVGDGFCGCLTTISTFANEL 268
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: F7AZ18_CIOIN (Fluoride export protein 2-like n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F7AZ18_CIOIN) HSP 1 Score: 91.7 bits (226), Expect = 7.010e-16 Identity = 75/272 (27.57%), Postives = 131/272 (48.16%), Query Frame = 1
Query: 307 YVAFCACFGTLARLYTD--------EIQSSNVALQGSFLSNSIGSFALGVLEASDLNEEHLGGLYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKGSTGGIFAAVSMVQT-LAFFAVCYVAGRDLVKTLAENGRGRWRAGENGSRATTAWGAFAGVVTVYIIMAIL-LYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQL------NESLRNGAFPAGTYLANVLGSLALALASYGATGSDLSGWSGIVLKGFQGGFLGSFTTMSTFMKEVV 1074
Y++F + G R+ D I+SS + S+ SN G F LG + +L G L TGLT GLCG TT+S WN +I + +G ++ +A+ ++ + ++ Y+ G D + + + + + S + V+ + +++A++ +Y + ++G+LAP GA +R+ +SM + + P GT LANVLGS+A+A+ Y + + + L G Q GFL TT+S+F+ EV+
Sbjct: 64 YISFFSIIGCFLRIGIDLVFSAELAHIESSTQIIVQSYFSNIFGCFLLGFIHRLNLKP---GPLVTGLTTGLCGCLTTYSKWNQQISLLLVGMVTTTSQSQLSAICVITIGMLTYSCSYITGEDFSRWVVSRNVIKRQLSKKASTICHCCITMSLVIIITVLLALIFIYQSKSYVILTLCLSGLLAPLGASMRYVISMVTPKFDFKRKVVVLNRLPTGTLLANVLGSIAIAVC-YVIKLHTHNTTTMVYLDGIQTGFLACLTTVSSFIGEVI 331
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: A0A7J7IH65_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IH65_9RHOD) HSP 1 Score: 83.6 bits (205), Expect = 4.900e-13 Identity = 88/312 (28.21%), Postives = 144/312 (46.15%), Query Frame = 1
Query: 403 NSIGSFALGVLEASD-LNEEHLGGLYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKGSTGGIFAAVSMV-----------------QTLAFFAVCYV-AGRD--LVKTLAENGRGRWRAGE---------NGSRATTA-------WGA--------------------FAGVVTVYIIMAIL------LYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGATGSDLSGWSGIVLKGFQGGFLGSFTTMSTFMKEVVGNRTSHGVAWSCLYLAATVATALVL 1149
N++GSF +G L SD + HL ++TGL GLCGS TTFS WN ++ + S + A ++V +++ +F + V A RD L + E R R +A + +RA A WG +A +++ + +A+L + +D+++TR+ YW+A + APFG +LR+ LS+ LN R+ P GT AN+L S A+A G S W+ ++LK GF G +T+STF+ E+ R + ++ Y + +V + + L
Sbjct: 139 NALGSFLIGFLVGSDDAFQAHLPYIHTGLATGLCGSLTTFSNWNQQLVAMFARGKNPSNQWLRALFALVIGLEIPIFSFTLGLHTERSIRYFLISRVYAPRDDELARLYQEYRRARQQARQPRRSLSLLDETARAAAALKGGHERWGRRRPKVAIGSHEDIAFHRRRFYAFLLSAVLCIALLTLAAVGVALDNDQTRKSYWMACIFAPFGVILRWQLSVHLNG--RHPWLPLGTLSANILASCVDAVAD-GVLLRTTSYWATVMLKAVVLGFSGCLSTVSTFVAELYRER---NIEYAYAYASVSVVSCIAL 444
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: A3M0N0_PICST (Uncharacterized protein n=1 Tax=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) TaxID=322104 RepID=A3M0N0_PICST) HSP 1 Score: 82.4 bits (202), Expect = 7.930e-13 Identity = 85/253 (33.60%), Postives = 122/253 (48.22%), Query Frame = 1
Query: 472 LYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKGSTGGIF-----AAVSMVQTLAFFAVC----------YVAGRDLVKTLAEN----GRGRWRAGENGSRATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGATGSDLSGWSGI--------VLKGFQGGFLGSFTTMSTFMKEVVGNRTSHGVAWSCLYLAATVATALVL 1149
LYTG+T G CG+ ++FS L A + + G+F AA +++ FFAV + GR V+T + R ++ E S A AG+ II +LL V D T R + A APFGALLRF+LS LN +++ FP GT+ AN LG++ LA+ + G L G I VL G GF G+ TT+STF+ E+ G RT H + + + A+ A L++
Sbjct: 151 LYTGITTGFCGTLSSFSSVMLE----AFNKSADTEIGVFYHYPNAAYGIME---FFAVNIAQFGLSITGFHIGRHFVETFDKEMPSFSRRTYKTLEKLSMAV----GVAGL----IITIVLLGVQDKGTWRSWLFAIFFAPFGALLRFYLSKYLNAKVKD--FPLGTFSANFLGTIFLAIFTLLGRGK-LPGGGQISKHTVGCHVLNGLDDGFCGALTTVSTFIVELFGLRTLHSYRYGVVSILASFALMLLI 385 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig1022.190.1 >prot_F-distichus_contig1022.190.1 ID=prot_F-distichus_contig1022.190.1|Name=mRNA_F-distichus_contig1022.190.1|organism=Fucus distichus monoicous|type=polypeptide|length=365bp MRGIVAAAVAEPRHAFPRCQRCGLFVNRAHRVRFRSYTPKTAAPRITAAAback to top mRNA from alignment at F-distichus_contig1022:1742..5079+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig1022.190.1 ID=mRNA_F-distichus_contig1022.190.1|Name=mRNA_F-distichus_contig1022.190.1|organism=Fucus distichus monoicous|type=mRNA|length=3338bp|location=Sequence derived from alignment at F-distichus_contig1022:1742..5079+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig1022:1742..5079+ >mRNA_F-distichus_contig1022.190.1 ID=mRNA_F-distichus_contig1022.190.1|Name=mRNA_F-distichus_contig1022.190.1|organism=Fucus distichus monoicous|type=CDS|length=2190bp|location=Sequence derived from alignment at F-distichus_contig1022:1742..5079+ (Fucus distichus monoicous)back to top |