mRNA_F-distichus_contig1022.190.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig1022.190.1
Unique NamemRNA_F-distichus_contig1022.190.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: D7G2L8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2L8_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 1.320e-98
Identity = 203/382 (53.14%), Postives = 243/382 (63.61%), Query Frame = 1
Query:   85 MRGIVAAAVAEPR---HAFPRCQRCG---LFVNRAHRVRFRSYTPKTAAPRITAAAGSAAATNTKENMLPPRRPMVVKCAYVAFCACFGTLARLYTDEI-QSSNVALQGSFLSNSIGSFALGVLEASDLNEEHLGGLYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKGS-TGGIFAAVSMVQTLAFFAVCYVAGRDLVKTLAENGR---------GRWRAGENGSRATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGATGSD--LSGWSGIVLKGFQGGFLGSFTTMSTFMKEVVGNRTSHGVAWSCLYLAATVATALVLVLVVGAVL 1173
            MR   AAAV  P    +   RCQ CG   LF+ R  +   R   P TA    TA + S     T+  MLP R PMV KCAY++FCACFGTLARLYTD+I  +SNVALQGSFL+NSIGSFALG L +S   E     +Y GLTVG CGSYTT+SGWNLRI R ALG   G+ +G I   VSM  +LAFFA C+ AG D++K +A +GR         G   AG +        G    V   Y+++A+LL VD+N +RRI W+A + APFGAL RFFLS QLN  LR GAFP GT+ ANVLGSL +AL+ YG   S    SGWS + +K FQ GFLGS TTMSTFM EVVG+R  H  + S +YLAAT   A  LVL+VGA+L
Sbjct:    1 MRSRAAAAVTSPAATPNTSRRCQHCGSSLLFIQRVFQTHHRK--PPTA----TATSNSNPGNKTEMTMLPGR-PMVAKCAYISFCACFGTLARLYTDDIGPASNVALQGSFLANSIGSFALGALASSPDRETIPDAMYAGLTVGFCGSYTTYSGWNLRIARAALGQVSGAPSGAIVTIVSMATSLAFFAACFSAGCDVMKQIASHGRRLNIRRMLGGGALAGGDSDAVRNTLGMLGAV---YVLLAVLLGVDNNWSRRIDWLACIFAPFGALSRFFLSRQLNSRLRGGAFPLGTFTANVLGSLVMALSFYGTKNSSSLTSGWSNVAIKAFQTGFLGSLTTMSTFMSEVVGHRDRHTPSASYIYLAATAIAAQALVLIVGAML 372          
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: H2Y779_CIOSA (Uncharacterized protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Y779_CIOSA)

HSP 1 Score: 124 bits (310), Expect = 8.600e-28
Identity = 92/260 (35.38%), Postives = 130/260 (50.00%), Query Frame = 1
Query:  331 GTLARLYTDEI-------QSSNVALQGSFLSNSIGSFALGVLEASDLNEEHLGGLYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKG-STGGIFAAVSMVQTLAFFAVCYVAGRDLVKTLAENGRGRWRAGENGSRATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGAT-----GSDLSGWSGIVLKGFQGGFLGSFTTMSTFMKEV 1071
            G L R+ TD+I       +SS   +  SF+SN +GSF LG L AS +    LG +Y GLT G CGSYTT+S WN ++    +G A   S   + + +S       F   Y  G D  K +   GR   +   NG + +     F  +V   I   + + VD  +T +  W+A + APFGA +R +L+    +  +   FP GT+LAN+LG+L LA  +   T     GS    WS +V  G   GF    TT+STFM E+
Sbjct:    3 GCLCRIGTDQIFGKLAKIESSAAVVNLSFVSNMVGSFVLGALNASPMGSTRLGAMYKGLTTGFCGSYTTWSKWNQQLSLTLVGGANAASQSQVLSILSWFVGFHSFIGSYCVGLDFGKDIG--GRIGKKVSPNGPKISNI-AVFLLLVGAVIGFIVGVVVDPTQTGKQIWMAVLFAPFGASIRAYLAKYKVDRFK---FPLGTFLANLLGALVLAAINVINTRAVTCGSGAICWSTVVTYGVGTGFCACLTTVSTFMSEI 256          
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: A0A836C7N9_9STRA (CrcB-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7N9_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.160e-26
Identity = 108/328 (32.93%), Postives = 155/328 (47.26%), Query Frame = 1
Query:  253 NTKENMLPPRRP------MVVKCAYVAFCACFGTLARLYTDEIQSSNVA--------LQGSFLSNSIGSFALGVLEASDLNEEHLGG---LYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKGSTGGIFAAVSMV-QTLAFFAVCYVAGRDLVKTLAENGRGRWRAGENGSRATTAWGAFAGVVTVY---------IIMAILLYVDDNR-TRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGATGSDLSGWSGIVLKGFQGGFLGSFTTMSTFMKEVVGNRTSHGVAWSCLYLAATVATALVLV 1152
            +T+EN+  P +P      +V     VA  A  G  AR++T+ +  S  A        L  SF  N  GS  LG L A+       GG   L TG++VGLCG+YTTFS W L+   + +           AA+  +  ++A F V +  G D+   L             G+    A G   G++ +          I ++I L V+DN    + YW++G+ A  GA LR+ L+ Q N+  R G FP GT+LAN+ G+LA AL ++  T    S W     + F  GF  S TTMST + E+   R  H V    +YLA+TV  A  +V
Sbjct:   77 STEENLKQPPQPQPQEPSVVNLYVSVALWAIAGCYARIFTERLFGSTAADVIDADTLLVPSFFDNVAGSMILGFLVAASTTMSKGGGALVLLTGMSVGLCGAYTTFSAWTLQTNALLIAPTSDVPQPQIAALCYIFASIATFIVAHRVGADVGALLT------------GAVQKAAPGISEGIIAIVNGVLLVATAIGLSIALGVNDNSWLEKRYWLSGLFAIPGASLRYALARQFNK-FRGGRFPLGTFLANIGGTLACALVTHEFT--KASDWDDTAARAFVTGFCASLTTMSTLVNELAILRRDHSVQDGVIYLASTVILAQFIV 389          
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: F6XSK1_CIOIN (Fluoride export protein 2 n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6XSK1_CIOIN)

HSP 1 Score: 123 bits (308), Expect = 2.550e-26
Identity = 96/285 (33.68%), Postives = 132/285 (46.32%), Query Frame = 1
Query:  274 PPRRPMVVKCAYVAFCACFGTLARLYTDEI-------QSSNVALQGSFLSNSIGSFALGVLEASDLNEEHLGGLYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKG-STGGIFAAVSMVQTLAFFAVCYVAGRDLVKTLAENGRGRWRAGENGSR------ATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASY-----GATGSDLSGWSGIVLKGFQGGFLGSFTTMSTFMKEV 1071
            PP  P      ++AF A  G L R+ TD+I       ++S   +  SF+SN +GSF LG L AS +    LG +Y GLT G CGSYTT+S WN ++    +G+    S   + + VS       F   Y  G D  K +   GR   +   NG +      A   + A AG +   I+       D  +T +  W+A + APFGA +R +L+    E       P GT LAN+LG+L LA            GS    W  +V  G   GF    TT+STFM E+
Sbjct:   94 PPTPPQWQLYMHIAFFAMCGCLCRIGTDKIFGTLAVIENSGEVVNLSFISNMVGSFVLGALNASPMGSTRLGAMYKGLTTGFCGSYTTWSKWNQQLSLALVGETNTVSQSQVLSIVSWFIGFHSFIGSYCVGLDFGKDVG--GRIGKKVSPNGPKISNIAVAVLLFSAAAGFIVGVIV-------DPTQTGKSIWMAVLFAPFGACIRAYLAKYKYERFM---LPLGTLLANLLGALVLAAIHVINVRAVTCGSGTICWGSVVTYGIGTGFCACLTTVSTFMSEI 366          
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: A0A1Y2FQS7_PROLT (CrcB-like protein-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FQS7_PROLT)

HSP 1 Score: 95.9 bits (237), Expect = 1.440e-17
Identity = 97/294 (32.99%), Postives = 139/294 (47.28%), Query Frame = 1
Query:  274 PPRRPMVV-KCAYVAFCACFGTLARLYTDEIQSSNVALQGSFL-SNSIGSFALGVLEASDL--NEEHLGGLYTGLTVGLCGSYTTFSGWNLRIGRVALGD-------AKGSTG--GIFAAVSMVQTLAFFAVCYVAGRDLVKTLAEN-GRGRWRAGENGSRATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGATGSDLSGWSGI---VLKGFQGGFLGSFTTMSTFMKEVVGNRTSHGVAW 1104
            P R   V+ +CA++   +  GTL+RL   E+ +    L  + + +  +G   +G L+   +         L+TGLTVG CGS TTFSGW L     AL D       A  STG   I     +  TLAF  V +  G+     LA    + R    +  +R      A   ++   +++A+   VD    RR Y +A  + P GALLR+ LS   N   R  +FP GT+ AN+LG    AL     T  D  G +GI    L+G Q GF G+ TT+S+F+ E+   +  H  AW
Sbjct:   18 PSRALQVIHECAWIGLLSLLGTLSRLALVELNTYPGNLIPALVWAQFVGCAVMGFLKHDQVFFQPNRHKALFTGLTVGFCGSLTTFSGWLLAC-FTALSDYGTSEASAGRSTGYNAIGLIAQLTTTLAFSIVGFKLGQHAADGLASIFPKARLTFPQATTRTAVCITALLALLAQAVVIAVAASVDHTSWRRRYTLALAMTPTGALLRYLLSQLFNH--RVLSFPLGTFNANILGCFLEALFFLLQTVVDRDG-AGIHFLALQGLQDGFCGALTTVSSFVSELHTLKRKH--AW 305          
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: UPI00193A23B4 (fluoride export protein 1-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A23B4)

HSP 1 Score: 93.2 bits (230), Expect = 1.710e-16
Identity = 85/276 (30.80%), Postives = 133/276 (48.19%), Query Frame = 1
Query:  358 EIQSSNVALQGSFLSNSIGSFALGVLEASDL-NEEHLGGLYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKGSTGGIFAAVSMVQTLAFFAVC-YVAGRDLVKTLAE-------NGRGRWRAGENGSRATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYW-VAGMLAPFGALLRFFLS---MQLNESLRNG---AFPAGTYLANVLGSLALALASYGATGSDL-SGWSGIVLKGFQGGFLGSFTTMSTFMKEVVGNRTSHGVAWSCLYLAATVA 1134
            +I+S N  +  SF +N IGSF LG+L AS L N   +  +YTGL+ GLCGS TTFS +N ++  + +G A       F A + +       +C ++ G DL   + +           R R     S++   + +    +  +I + +L  V  +    IY  + G+LAPFGA LRF LS   +     L+ G     P GT+LAN +G+  +A  +     +++   W     +  Q GF    TT+STF+ E+   R+  G+  S  Y   T+A
Sbjct:   69 QIESPNSIIFQSFFANMIGSFILGLLTASTLKNMSGMLPIYTGLSTGLCGSITTFSKFNQQVSEMIVGQAITIGNPYFTAFAAIILGIAAPICSFIFGHDLSLEIRKVVCVTDGTDFSRQRRSIKVSKSII-YISIPFFIISWITLLVLAIVYSHHQNIIYTCLCGVLAPFGATLRFILSKLNVNTRPCLKYGFLKRMPIGTFLANFIGATVMAFLNVILVWTNMWCPWKAF-FRALQSGFCACLTTVSTFVSEITSLRSKEGIFVSHCYAFLTIA 342          
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: A0A1Y1V1F4_9FUNG (Uncharacterized protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1V1F4_9FUNG)

HSP 1 Score: 90.9 bits (224), Expect = 4.240e-16
Identity = 79/266 (29.70%), Postives = 132/266 (49.62%), Query Frame = 1
Query:  310 VAFCACFGTLARLYTDEIQSSNVALQGSFLSNSIGSFALGVLEASDLNEEHLGG----LYTGLTVGLCGSYTTFSGWNLRIGR--------VALGDAKGSTGGIFAAVSMVQTLAFFAVCYVAGRDLVKTLAENGRGRWRAGENGSRATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGATGSDLSGWSGIVLKGFQGGFLGSFTTMSTFMKEV 1071
            +A  A  G L R+  ++I+S         L NSIG   LG++ A    +  + G    +Y GLT GLCGS TTFS WN+ + +         +       +G +   VS+    A     Y  G+ L  +  E      +  +   + +T +  +AG+    +I+ ++L + D   R++ W++ +LAPFGAL+R+FLS + N+  +N  FP GT++AN++G+L LA+ +      +   +    +     GF G  TT+STF  E+
Sbjct:   12 IALFAIIGVLIRIELNKIESELFIHLPFILPNSIGCILLGLVNAF---KNTISGWQYAVYLGLTTGLCGSITTFSSWNMAVFKDIFNLPHFTSYSYRNICSGLLEIIVSLTAYTALIKFGYHIGKFLPFSNKEEVPTTIKREK--PKMSTKFFIYAGITAGLLILTLVLTIVDGDIRKV-WLSCLLAPFGALIRYFLSSK-NKMFQN--FPFGTFIANIMGTLCLAVFNILRYSLNHHEFLCHFITAVGDGFCGCLTTISTFANEL 268          
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: F7AZ18_CIOIN (Fluoride export protein 2-like n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F7AZ18_CIOIN)

HSP 1 Score: 91.7 bits (226), Expect = 7.010e-16
Identity = 75/272 (27.57%), Postives = 131/272 (48.16%), Query Frame = 1
Query:  307 YVAFCACFGTLARLYTD--------EIQSSNVALQGSFLSNSIGSFALGVLEASDLNEEHLGGLYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKGSTGGIFAAVSMVQT-LAFFAVCYVAGRDLVKTLAENGRGRWRAGENGSRATTAWGAFAGVVTVYIIMAIL-LYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQL------NESLRNGAFPAGTYLANVLGSLALALASYGATGSDLSGWSGIVLKGFQGGFLGSFTTMSTFMKEVV 1074
            Y++F +  G   R+  D         I+SS   +  S+ SN  G F LG +   +L     G L TGLT GLCG  TT+S WN +I  + +G    ++    +A+ ++   +  ++  Y+ G D  + +      + +  +  S         + V+ + +++A++ +Y   +       ++G+LAP GA +R+ +SM         + +     P GT LANVLGS+A+A+  Y       +  + + L G Q GFL   TT+S+F+ EV+
Sbjct:   64 YISFFSIIGCFLRIGIDLVFSAELAHIESSTQIIVQSYFSNIFGCFLLGFIHRLNLKP---GPLVTGLTTGLCGCLTTYSKWNQQISLLLVGMVTTTSQSQLSAICVITIGMLTYSCSYITGEDFSRWVVSRNVIKRQLSKKASTICHCCITMSLVIIITVLLALIFIYQSKSYVILTLCLSGLLAPLGASMRYVISMVTPKFDFKRKVVVLNRLPTGTLLANVLGSIAIAVC-YVIKLHTHNTTTMVYLDGIQTGFLACLTTVSSFIGEVI 331          
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: A0A7J7IH65_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IH65_9RHOD)

HSP 1 Score: 83.6 bits (205), Expect = 4.900e-13
Identity = 88/312 (28.21%), Postives = 144/312 (46.15%), Query Frame = 1
Query:  403 NSIGSFALGVLEASD-LNEEHLGGLYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKGSTGGIFAAVSMV-----------------QTLAFFAVCYV-AGRD--LVKTLAENGRGRWRAGE---------NGSRATTA-------WGA--------------------FAGVVTVYIIMAIL------LYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGATGSDLSGWSGIVLKGFQGGFLGSFTTMSTFMKEVVGNRTSHGVAWSCLYLAATVATALVL 1149
            N++GSF +G L  SD   + HL  ++TGL  GLCGS TTFS WN ++  +       S   + A  ++V                 +++ +F +  V A RD  L +   E  R R +A +           +RA  A       WG                     +A +++  + +A+L      + +D+++TR+ YW+A + APFG +LR+ LS+ LN   R+   P GT  AN+L S   A+A  G      S W+ ++LK    GF G  +T+STF+ E+   R    + ++  Y + +V + + L
Sbjct:  139 NALGSFLIGFLVGSDDAFQAHLPYIHTGLATGLCGSLTTFSNWNQQLVAMFARGKNPSNQWLRALFALVIGLEIPIFSFTLGLHTERSIRYFLISRVYAPRDDELARLYQEYRRARQQARQPRRSLSLLDETARAAAALKGGHERWGRRRPKVAIGSHEDIAFHRRRFYAFLLSAVLCIALLTLAAVGVALDNDQTRKSYWMACIFAPFGVILRWQLSVHLNG--RHPWLPLGTLSANILASCVDAVAD-GVLLRTTSYWATVMLKAVVLGFSGCLSTVSTFVAELYRER---NIEYAYAYASVSVVSCIAL 444          
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Match: A3M0N0_PICST (Uncharacterized protein n=1 Tax=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) TaxID=322104 RepID=A3M0N0_PICST)

HSP 1 Score: 82.4 bits (202), Expect = 7.930e-13
Identity = 85/253 (33.60%), Postives = 122/253 (48.22%), Query Frame = 1
Query:  472 LYTGLTVGLCGSYTTFSGWNLRIGRVALGDAKGSTGGIF-----AAVSMVQTLAFFAVC----------YVAGRDLVKTLAEN----GRGRWRAGENGSRATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYWVAGMLAPFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGATGSDLSGWSGI--------VLKGFQGGFLGSFTTMSTFMKEVVGNRTSHGVAWSCLYLAATVATALVL 1149
            LYTG+T G CG+ ++FS   L     A   +  +  G+F     AA  +++   FFAV           +  GR  V+T  +      R  ++  E  S A       AG+    II  +LL V D  T R +  A   APFGALLRF+LS  LN  +++  FP GT+ AN LG++ LA+ +    G  L G   I        VL G   GF G+ TT+STF+ E+ G RT H   +  + + A+ A  L++
Sbjct:  151 LYTGITTGFCGTLSSFSSVMLE----AFNKSADTEIGVFYHYPNAAYGIME---FFAVNIAQFGLSITGFHIGRHFVETFDKEMPSFSRRTYKTLEKLSMAV----GVAGL----IITIVLLGVQDKGTWRSWLFAIFFAPFGALLRFYLSKYLNAKVKD--FPLGTFSANFLGTIFLAIFTLLGRGK-LPGGGQISKHTVGCHVLNGLDDGFCGALTTVSTFIVELFGLRTLHSYRYGVVSILASFALMLLI 385          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1022.190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2L8_ECTSI1.320e-9853.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
H2Y779_CIOSA8.600e-2835.38Uncharacterized protein n=1 Tax=Ciona savignyi Tax... [more]
A0A836C7N9_9STRA2.160e-2632.93CrcB-like protein-domain-containing protein n=1 Ta... [more]
F6XSK1_CIOIN2.550e-2633.68Fluoride export protein 2 n=2 Tax=Ciona intestinal... [more]
A0A1Y2FQS7_PROLT1.440e-1732.99CrcB-like protein-domain-containing protein n=1 Ta... [more]
UPI00193A23B41.710e-1630.80fluoride export protein 1-like n=1 Tax=Styela clav... [more]
A0A1Y1V1F4_9FUNG4.240e-1629.70Uncharacterized protein n=1 Tax=Piromyces finnis T... [more]
F7AZ18_CIOIN7.010e-1627.57Fluoride export protein 2-like n=1 Tax=Ciona intes... [more]
A0A7J7IH65_9RHOD4.900e-1328.21Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A3M0N0_PICST7.930e-1333.60Uncharacterized protein n=1 Tax=Scheffersomyces st... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig1022contigF-distichus_contig1022:1742..5079 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score132.5
Seed ortholog evalue4e-28
Seed eggNOG ortholog51511.ENSCSAVP00000001177
KEGG koko:K06199
KEGG TC1.A.43.1,1.A.43.2,1.A.43.3
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.CrcB-like protein, Camphor Resistance (CrcB)
EggNOG OGs2QT5F@2759,39IFP@33154,3C3JJ@33208,COG0239@1
Ec32 ortholog descriptionPutative fluoride ion transporter CrcB
Ec32 orthologEc-11_002710.1
COG Functional cat.D
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons2
Model size2770
Cds size1095
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig1022.190.1prot_F-distichus_contig1022.190.1Fucus distichus monoicouspolypeptideF-distichus_contig1022 1826..3488 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928936.9992592-UTR-F-distichus_contig1022:1741..18251622928936.9992592-UTR-F-distichus_contig1022:1741..1825Fucus distichus monoicousUTRF-distichus_contig1022 1742..1825 +
1690885074.6050353-UTR-F-distichus_contig1022:1741..18251690885074.6050353-UTR-F-distichus_contig1022:1741..1825Fucus distichus monoicousUTRF-distichus_contig1022 1742..1825 +
1622928937.0488284-UTR-F-distichus_contig1022:3488..50791622928937.0488284-UTR-F-distichus_contig1022:3488..5079Fucus distichus monoicousUTRF-distichus_contig1022 3489..5079 +
1690885074.6347463-UTR-F-distichus_contig1022:3488..50791690885074.6347463-UTR-F-distichus_contig1022:3488..5079Fucus distichus monoicousUTRF-distichus_contig1022 3489..5079 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928937.0193546-CDS-F-distichus_contig1022:1825..26101622928937.0193546-CDS-F-distichus_contig1022:1825..2610Fucus distichus monoicousCDSF-distichus_contig1022 1826..2610 +
1690885074.6163042-CDS-F-distichus_contig1022:1825..26101690885074.6163042-CDS-F-distichus_contig1022:1825..2610Fucus distichus monoicousCDSF-distichus_contig1022 1826..2610 +
1622928937.0330749-CDS-F-distichus_contig1022:3178..34881622928937.0330749-CDS-F-distichus_contig1022:3178..3488Fucus distichus monoicousCDSF-distichus_contig1022 3179..3488 +
1690885074.6256034-CDS-F-distichus_contig1022:3178..34881690885074.6256034-CDS-F-distichus_contig1022:3178..3488Fucus distichus monoicousCDSF-distichus_contig1022 3179..3488 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig1022.190.1

>prot_F-distichus_contig1022.190.1 ID=prot_F-distichus_contig1022.190.1|Name=mRNA_F-distichus_contig1022.190.1|organism=Fucus distichus monoicous|type=polypeptide|length=365bp
MRGIVAAAVAEPRHAFPRCQRCGLFVNRAHRVRFRSYTPKTAAPRITAAA
GSAAATNTKENMLPPRRPMVVKCAYVAFCACFGTLARLYTDEIQSSNVAL
QGSFLSNSIGSFALGVLEASDLNEEHLGGLYTGLTVGLCGSYTTFSGWNL
RIGRVALGDAKGSTGGIFAAVSMVQTLAFFAVCYVAGRDLVKTLAENGRG
RWRAGENGSRATTAWGAFAGVVTVYIIMAILLYVDDNRTRRIYWVAGMLA
PFGALLRFFLSMQLNESLRNGAFPAGTYLANVLGSLALALASYGATGSDL
SGWSGIVLKGFQGGFLGSFTTMSTFMKEVVGNRTSHGVAWSCLYLAATVA
TALVLVLVVGAVLG*
back to top

mRNA from alignment at F-distichus_contig1022:1742..5079+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig1022.190.1 ID=mRNA_F-distichus_contig1022.190.1|Name=mRNA_F-distichus_contig1022.190.1|organism=Fucus distichus monoicous|type=mRNA|length=3338bp|location=Sequence derived from alignment at F-distichus_contig1022:1742..5079+ (Fucus distichus monoicous)
CTTCCAATGGGTGGAAATACAGACAAAATTCCACATTACGGTATCAAAAA CACGTAAGAAACAGATACAAGTGCACAGTATCTCATGAGAGGGATAGTGG CAGCAGCGGTAGCGGAGCCCAGACACGCGTTTCCACGCTGTCAGCGCTGT GGCCTATTCGTGAACCGCGCACATCGTGTAAGGTTTCGGAGTTACACACC AAAAACTGCCGCTCCTCGCATAACGGCAGCCGCAGGGAGCGCGGCTGCCA CCAACACAAAAGAAAATATGCTGCCACCGAGACGCCCAATGGTCGTCAAG TGCGCTTACGTAGCTTTCTGCGCGTGCTTCGGGACGCTAGCGCGTCTTTA TACCGACGAAATTCAATCCTCGAATGTTGCTCTGCAAGGCTCCTTCCTCA GCAACTCGATCGGCAGCTTCGCCCTCGGCGTCCTTGAGGCATCCGATCTC AACGAGGAGCACCTTGGCGGCTTGTATACGGGACTGACCGTTGGCCTGTG TGGCTCCTACACCACCTTTTCAGGGTGGAATCTCCGAATAGGACGAGTTG CTTTGGGGGACGCCAAGGGTTCAACGGGTGGGATCTTCGCCGCCGTTTCC ATGGTGCAAACGTTGGCATTTTTCGCCGTCTGTTACGTTGCCGGCCGCGA CTTGGTGAAGACCCTGGCGGAGAACGGAAGAGGCCGTTGGAGGGCGGGAG AAAACGGCAGTCGCGCAACGACGGCTTGGGGCGCGTTCGCGGGGGTGGTT ACGGTGTATATCATCATGGCCATTCTGCTGTACGTGGACGATAATCGGAC GAGGAGGATATATTGGGTGGCAGGCATGCTCGCCCCTTTTGGAGCACTAC TGAGGTTTTTTCTCTCTATGTAAGATATGAAATATATATGTGTGTGTGTG TCTTATATGAAGTCCTCTTGTATGAAGGCGTGGACGTTCGCGTACGCATT TCCCCCTTTCAAAGAGCGTACGTAGCAAAGTCAGTTCGTTTTCTCTGTGT GCAGACTGTATGTAGTCCTTCCTCTGTATAATGAGTGCGCTGAAGCACCC AAATGGCACGCCATGAAGAGCTTTTATCCTCACAGCCGATGTTCCCACCT AAACGTTATGACACTTTTCCCCCCTGATTGGGTGGATGCCCAGAAGGTTT AGATGCGTTGAGATTTTTCCTGAGACATCTCGTCGTTCCAAGTGCGAAAA TTTCCGAAGGCTGCTGAATTGAAAAATGCTATAGTCCCTTCCTTCAGTGT GCCTCCCCCGATTCGCCATGCCATACATACAAATCAACTGATATTTATAT TGTTCCGAAGTAAAACAATGAAGACGAAAACACGATGGAAACACAAACAG CATTCCATGAAATGACTTGAAAAAAGAGCTCTCTACGCTCTCACCCATCT CACCGCCCCCGGCACCTGTGTCGTGCGCGAACACCAGGCAACTCAACGAG TCCTTGCGAAACGGTGCGTTTCCGGCGGGGACTTACCTCGCCAACGTGTT GGGCTCCCTGGCGCTAGCCCTCGCCTCCTACGGCGCCACTGGATCAGACC TCTCCGGGTGGAGCGGCATCGTGCTGAAGGGTTTCCAGGGGGGCTTTCTT GGGTCGTTCACCACCATGTCGACATTCATGAAAGAGGTGGTTGGTAACCG CACATCGCACGGCGTCGCGTGGAGCTGTCTCTACCTAGCGGCGACGGTCG CGACCGCCCTCGTGCTTGTGCTTGTCGTTGGGGCTGTGCTTGGGTGACGC GATTCCTCGCTCGGTTGTTGGATGGATTTAACGAGTTTGGCAACCAGCTT CTTCCCGTCGCGCTAGACGCGGCAGACCGCACCAAGGCGGTGTGAAGCTT TTCTAATGAAAGAGGGACCCGAGACCGCAAGAGTTCAGGGCAGGAGTGAG GAGGTTCACACGTTTAAACAAACATTCATATCGGTGGGCGGTTCGAGATC AAATATAGGGTGGGGTCGAGGTGAGGCATTGTAGCTGGATGAAAGTCGTT TTCTCCGTCCTTACGTGTGCATTTGTTTTAAAAATGTAGTGAACCCGGTA GATCCAGAGCTAAACCGGAACCAGAGTATATCTGCAGGCAATCCCTTATG ATTTTGTAATGACTCTGCGTCCGATTTCCGAGACCAACTCTTCTGCCGAG ATGAACGGCGGAACGCCCGCATAATATGTACAGGTAATCTTTACGGTAGA ATCAGTTAGGCCAGTACACTACAAACAGTAGTGCCGTGCGCGTACGTATA TATGAACACTGTATTAATATAAGGTTTGCGACGCTTACTTACTATTTAGA TTATAGATCGTGATGAAACGGGGTTCTGTGCCTGTCTCGACCTTCGAGAG AACATCCCATGCGTTCTTCGCAGAGAGAGTAGCTGCGCGTGCGGTCCCTG TGCCACATGTTACACATGTCTGCTTTAGCTCTTCTGCATCTCGGCTTTCG ATAATTCGAGTAAATTCGTGCGCACGTATTTATTATTAGAGATGTGAGTA TATAGTACGTAGTTTTACTTCTACTCTTTCTTCTTGGTGCGGGTTTTAGG CAAAACTTTTTTGTCATGCATTACGATTGTTTTGGTAGATCTACATACTG TCAACTATATATCCCACCGGAACAGTCCCGTATCTTGCGCTATCATTTGA CGTGCGTTAACGTAGTGTTATTTTGGCTTTTCATACAGCGAAATTATCGA AGACCTGGTGGTACTCGAAATCGTGGAGTATGAGTGTAGTGTAGTATCAA AATGAGCAGTAAAACAATGAAACATGTGCCGACGGTTGAGACTTGGATCG GGAACTCTCCCTCCCCCCTCAAACCTTCGTGGAGCACGTTGCTGTTACCG TTTATCTTCGTATCCCGTGTAGTACCGTATCGTGTCCTTTACTTGCTTTT CATGAAAATGACGACCTGCTTCTTACCCCGAGTCGTGTGTGATTTGCGAG CAGCGAAACCGTCGAGTTTCTTTACCTTTTCGTTTGTTTTTATTCGTTTT CGTCACATAGTCACTCTTGGTTGTGGTCGCGTAAATGCGAAGGTGTCTAT GTGTATTACAGACAAACACTATAAAGTAGATCAGAAATCGGTCTATCCGT CCCTACGTAGACATAATAGGTGCGCGGGGCGCCACAGCGGCTCGTATCTA AGGCGGCGATTCTGATGAGAATTGAGTGGCGTCTTGGCTGCGGAGTTTCG CAACGCAGGGGAAATATCTTTTTGTTGTTGGCGGTTAAAAGATTACGGCG AACTTCCCAACAGTTTTCTACACAGGAGAGGAATGTTTTGGGGGTGTTCC GGTTCGTGAAAAATATGACGTTACTCATCAAGAGCGGG
back to top

Coding sequence (CDS) from alignment at F-distichus_contig1022:1742..5079+

>mRNA_F-distichus_contig1022.190.1 ID=mRNA_F-distichus_contig1022.190.1|Name=mRNA_F-distichus_contig1022.190.1|organism=Fucus distichus monoicous|type=CDS|length=2190bp|location=Sequence derived from alignment at F-distichus_contig1022:1742..5079+ (Fucus distichus monoicous)
ATGAGAGGGATAGTGGCAGCAGCGGTAGCGGAGCCCAGACACGCGTTTCC
ACGCTGTCAGCGCTGTGGCCTATTCGTGAACCGCGCACATCGTGTAAGGT
TTCGGAGTTACACACCAAAAACTGCCGCTCCTCGCATAACGGCAGCCGCA
GGGAGCGCGGCTGCCACCAACACAAAAGAAAATATGCTGCCACCGAGACG
CCCAATGGTCGTCAAGTGCGCTTACGTAGCTTTCTGCGCGTGCTTCGGGA
CGCTAGCGCGTCTTTATACCGACGAAATTCAATCCTCGAATGTTGCTCTG
CAAGGCTCCTTCCTCAGCAACTCGATCGGCAGCTTCGCCCTCGGCGTCCT
TGAGGCATCCGATCTCAACGAGGAGCACCTTGGCGGCTTGTATACGGGAC
TGACCGTTGGCCTGTGTGGCTCCTACACCACCTTTTCAGGGTGGAATCTC
CGAATAGGACGAGTTGCTTTGGGGGACGCCAAGGGTTCAACGGGTGGGAT
CTTCGCCGCCGTTTCCATGGTGCAAACGTTGGCATTTTTCGCCGTCTGTT
ACGTTGCCGGCCGCGACTTGGTGAAGACCCTGGCGGAGAACGGAAGAGGC
CGTTGGAGGGCGGGAGAAAACGGCAGTCGCGCAACGACGGCTTGGGGCGC
GTTCGCGGGGGTGGTTACGGTGTATATCATCATGGCCATTCTGCTGTACG
TGGACGATAATCGGACGAGGAGGATATATTGGGTGGCAGGCATGCTCGCC
CCTTTTGGAGCACTACTGAGGTTTTTTCTCTCTATATGAGAGGGATAGTG
GCAGCAGCGGTAGCGGAGCCCAGACACGCGTTTCCACGCTGTCAGCGCTG
TGGCCTATTCGTGAACCGCGCACATCGTGTAAGGTTTCGGAGTTACACAC
CAAAAACTGCCGCTCCTCGCATAACGGCAGCCGCAGGGAGCGCGGCTGCC
ACCAACACAAAAGAAAATATGCTGCCACCGAGACGCCCAATGGTCGTCAA
GTGCGCTTACGTAGCTTTCTGCGCGTGCTTCGGGACGCTAGCGCGTCTTT
ATACCGACGAAATTCAATCCTCGAATGTTGCTCTGCAAGGCTCCTTCCTC
AGCAACTCGATCGGCAGCTTCGCCCTCGGCGTCCTTGAGGCATCCGATCT
CAACGAGGAGCACCTTGGCGGCTTGTATACGGGACTGACCGTTGGCCTGT
GTGGCTCCTACACCACCTTTTCAGGGTGGAATCTCCGAATAGGACGAGTT
GCTTTGGGGGACGCCAAGGGTTCAACGGGTGGGATCTTCGCCGCCGTTTC
CATGGTGCAAACGTTGGCATTTTTCGCCGTCTGTTACGTTGCCGGCCGCG
ACTTGGTGAAGACCCTGGCGGAGAACGGAAGAGGCCGTTGGAGGGCGGGA
GAAAACGGCAGTCGCGCAACGACGGCTTGGGGCGCGTTCGCGGGGGTGGT
TACGGTGTATATCATCATGGCCATTCTGCTGTACGTGGACGATAATCGGA
CGAGGAGGATATATTGGGTGGCAGGCATGCTCGCCCCTTTTGGAGCACTA
CTGAGGTTTTTTCTCTCTATGCAACTCAACGAGTCCTTGCGAAACGGTGC
GTTTCCGGCGGGGACTTACCTCGCCAACGTGTTGGGCTCCCTGGCGCTAG
CCCTCGCCTCCTACGGCGCCACTGGATCAGACCTCTCCGGGTGGAGCGGC
ATCGTGCTGAAGGGTTTCCAGGGGGGCTTTCTTGGGTCGTTCACCACCAT
GTCGACATTCATGAAAGAGGTGGTTGGTAACCGCACATCGCACGGCGTCG
CGTGGAGCTGTCTCTACCTAGCGGCGACGGTCGCGACCGCCCTCGTGCTT
GTGCTTGTCGTTGGGGCTGTGCTTGGGTGAGCAACTCAACGAGTCCTTGC
GAAACGGTGCGTTTCCGGCGGGGACTTACCTCGCCAACGTGTTGGGCTCC
CTGGCGCTAGCCCTCGCCTCCTACGGCGCCACTGGATCAGACCTCTCCGG
GTGGAGCGGCATCGTGCTGAAGGGTTTCCAGGGGGGCTTTCTTGGGTCGT
TCACCACCATGTCGACATTCATGAAAGAGGTGGTTGGTAACCGCACATCG
CACGGCGTCGCGTGGAGCTGTCTCTACCTAGCGGCGACGGTCGCGACCGC
CCTCGTGCTTGTGCTTGTCGTTGGGGCTGTGCTTGGGTGA
back to top