mRNA_F-distichus_contig102181.188.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig102181.188.1
Unique NamemRNA_F-distichus_contig102181.188.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig102181.188.1 vs. uniprot
Match: A0A6H5KCE2_9PHAE (PKS_ER domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCE2_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 2.320e-101
Identity = 148/183 (80.87%), Postives = 164/183 (89.62%), Query Frame = 1
Query:    1 AMLQKCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGVAIIQMARDIGVRTINVVRERPPGDDTVELLKSLGADVVVTPSVLGNPGAFSRAVEGLALPKLGLNCTGGSIATSMALALDDGGVLVSYGGMSLRPTAIPGDVLQDRGLRCDGFWVTRWAQEHSREEREAMI 549
            +MLQKCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGVA+IQMARD+GVRTINVVRERPPGD+TVELLKSLGADVVVTP+VLG    ++ AV GL  P+LGLNC GGSIATS+A  LD+GG LVSYGGMSLRP  +P  +LQD+G+RCDGFW+TRW Q+  REEREAMI
Sbjct:  125 SMLQKCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGVAVIQMARDMGVRTINVVRERPPGDNTVELLKSLGADVVVTPAVLGVADDYAEAVAGLPPPRLGLNCVGGSIATSVAKQLDEGGALVSYGGMSLRPITLPATILQDKGVRCDGFWITRWTQDRPREEREAMI 307          
BLAST of mRNA_F-distichus_contig102181.188.1 vs. uniprot
Match: L8HDW9_ACACA (Oxidoreductase, zincbinding dehydrogenase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDW9_ACACA)

HSP 1 Score: 194 bits (492), Expect = 1.160e-57
Identity = 100/181 (55.25%), Postives = 123/181 (67.96%), Query Frame = 1
Query:    7 LQKCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGVAIIQMARDIGVRTINVVRERPPGDDTVELLKSLGADVVVTPSVLGNPGAFSRAVEGLALPKLGLNCTGGSIATSMALALDDGGVLVSYGGMSLRPTAIPGDVLQDRGLRCDGFWVTRWAQEHSREEREAMI 549
            L K   DI  EYAA I VNPCTAYRLL DF  L+ GD +IQNGANS VG A+IQ+A    V+TIN++R+RP   DTVE +KS GA +VVT   LG P AF R +  L  PKLGLNC GG+ AT +A  L+    LV+YGGMS +P  +P  +L  R ++  GFW++RW +EHS EER AMI
Sbjct:  144 LLKVKKDIKPEYAAAIAVNPCTAYRLLNDFADLKPGDVIIQNGANSAVGQAVIQLAAQREVKTINIIRDRPDLGDTVERMKSYGAYMVVTEDKLGTP-AFHRLISDLPKPKLGLNCVGGTSATEIARVLEKDSTLVTYGGMSRKPVQVPTSLLIFRNIQLRGFWLSRWVEEHSAEERLAMI 323          
BLAST of mRNA_F-distichus_contig102181.188.1 vs. uniprot
Match: A0A6S9DR41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DR41_HETAK)

HSP 1 Score: 189 bits (480), Expect = 7.120e-56
Identity = 94/179 (52.51%), Postives = 119/179 (66.48%), Query Frame = 1
Query:   13 KCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGVAIIQMARDIGVRTINVVRERPPGDDTVELLKSLGADVVVTPSVLGNPGAFSRAVEGLALPKLGLNCTGGSIATSMALALDDGGVLVSYGGMSLRPTAIPGDVLQDRGLRCDGFWVTRWAQEHSREEREAMI 549
            K P  +PAEYAA + VNPCTA+RLLRDF+ L EGD +IQNGANS VG+A+IQMA+  G+ T+NVVR RP G + ++ LK LG DVV     + N   F R +  L  PKL LNC GG  A ++A AL   G LV+YGGMS +P  +P   L    +   GFW++RW +E SR EREAM+
Sbjct:  144 KVPPSLPAEYAACLSVNPCTAFRLLRDFQELGEGDVIIQNGANSMVGMAVIQMAKARGITTVNVVRNRPQGQEVMQFLKDLGGDVVCFDEYV-NTYRFERLMADLPKPKLALNCVGGPSAANLARALGPHGTLVTYGGMSRQPVTLPASALMHNNVTARGFWMSRWNREASRAEREAMV 321          
BLAST of mRNA_F-distichus_contig102181.188.1 vs. uniprot
Match: A0A1Y1IFE2_KLENI (Mitochondrial Enoyl-ACP Synthase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFE2_KLENI)

HSP 1 Score: 187 bits (475), Expect = 1.880e-55
Identity = 93/181 (51.38%), Postives = 122/181 (67.40%), Query Frame = 1
Query:    7 LQKCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGVAIIQMARDIGVRTINVVRERPPGDDTVELLKSLGADVVVTPSVLGNPGAFSRAVEGLALPKLGLNCTGGSIATSMALALDDGGVLVSYGGMSLRPTAIPGDVLQDRGLRCDGFWVTRWAQEHSREEREAMI 549
            L K  SD P EYAAT+ VNPCTAYR+L DF  L EGD V+QNGA S VG+A+IQ+AR+ G+ ++N++R+RP  ++    LK+LGA VV+T     +P    +A++G    KLGLNC GGS AT++   L  G  LV+YGGMS++P  I       + + C GFWV+RWAQEHS EER  MI
Sbjct:  113 LLKVRSDAPVEYAATVAVNPCTAYRMLEDFAHLEEGDVVVQNGATSMVGLAVIQLARERGLHSVNIIRDRPNFEEKAAELKALGASVVLTEERAQSPEG-KQAMKGFPPAKLGLNCVGGSAATAVTKLLGTGATLVTYGGMSMKPVTISTSYFIFKDITCKGFWVSRWAQEHSAEERSKMI 292          
BLAST of mRNA_F-distichus_contig102181.188.1 vs. uniprot
Match: D3BNI9_POLPP (Trans-2-enoyl-CoA reductase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BNI9_POLPP)

HSP 1 Score: 183 bits (464), Expect = 1.370e-53
Identity = 90/181 (49.72%), Postives = 119/181 (65.75%), Query Frame = 1
Query:    7 LQKCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGVAIIQMARDIGVRTINVVRERPPGDDTVELLKSLGADVVVTPSVLGNPGAFSRAVEGLALPKLGLNCTGGSIATSMALALDDGGVLVSYGGMSLRPTAIPGDVLQDRGLRCDGFWVTRWAQEHSREEREAMI 549
            LQK PSDIP EY + + +NPCTA RLL D+  L+ GD +IQN A+S VG+++IQ+A+  GV+TINV+R  P  DD V+ LK LG D+VV    + +P  F R +  L  P+L LN  GG  AT +A  L D G LV+YGGMS RP  IP   L  R +   GFW+T+W + HS++ER+AM 
Sbjct:  133 LQKVPSDIPTEYLSAVSINPCTALRLLDDYVQLKSGDVIIQNAASSMVGLSVIQIAKSRGVKTINVIRRGPDFDDQVQRLKGLGGDIVVDEDYVRSP-EFQRLISDLPRPRLALNAVGGDSATELARVLGDNGHLVTYGGMSRRPVTIPTSHLVFRNITSHGFWLTKWLETHSQQERQAMF 312          
BLAST of mRNA_F-distichus_contig102181.188.1 vs. uniprot
Match: UPI000644F83A (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644F83A)

HSP 1 Score: 181 bits (460), Expect = 5.320e-53
Identity = 91/181 (50.28%), Postives = 119/181 (65.75%), Query Frame = 1
Query:    7 LQKCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGVAIIQMARDIGVRTINVVRERPPGDDTVELLKSLGADVVVTPSVLGNPGAFSRAVEGLALPKLGLNCTGGSIATSMALALDDGGVLVSYGGMSLRPTAIPGDVLQDRGLRCDGFWVTRWAQEHSREEREAMI 549
            LQK PSDIP EY + + +NPCTA RLL D+ TL+ GD VIQN A+S VG+++IQ+A+  G++TINVV   P  D+ V LLK LGAD+VV    +  P  F+R +  L  P+L LN  GG  AT +A  L DGG LV+YG MS R   +P   L  R +   GFW+TRW ++HS +ER+AM 
Sbjct:  132 LQKVPSDIPTEYLSAVSINPCTALRLLDDYVTLKAGDVVIQNAASSMVGLSLIQIAKSRGIKTINVVSRSPDYDEQVTLLKGLGADIVVDDEYIRTP-EFARLIADLPRPRLALNAVGGQSATELARVLGDGGHLVTYGSMSRRAVTVPTSHLVFRDITVHGFWLTRWIEKHSAQERQAMF 311          
BLAST of mRNA_F-distichus_contig102181.188.1 vs. uniprot
Match: F4PH12_CAVFA (Trans-2-enoyl-CoA reductase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PH12_CAVFA)

HSP 1 Score: 179 bits (454), Expect = 7.230e-52
Identity = 88/180 (48.89%), Postives = 119/180 (66.11%), Query Frame = 1
Query:    7 LQKCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGVAIIQMARDIGVRTINVVRERPPGDDTVELLKSLGADVVVTPSVLGNPGAFSRAVEGLALPKLGLNCTGGSIATSMALALDDGGVLVSYGGMSLRPTAIPGDVLQDRGLRCDGFWVTRWAQEHSREEREAM 546
            L K P+DIP EY + + +NPCTAYRLL DF  L+ GD VIQNGA+S VG+++IQM +  G++TIN++R     D+TV+ LK LG D+VV+   +  P  ++R V  L  P+L LN  GG  AT +A  + DGG LV+YGGMS RP  +P   L  R +   GFW+TRW ++HS+ E  AM
Sbjct:  147 LYKVPADIPTEYLSAVTINPCTAYRLLEDFAKLKAGDVVIQNGASSMVGLSVIQMCKARGIKTINIIRRSSDYDETVDRLKKLGGDIVVSEEYVRTP-EYARLVADLPRPRLALNAVGGDSATELARNVADGGALVTYGGMSRRPVTVPTAHLIFRNVSVHGFWLTRWVEQHSQAEISAM 325          
BLAST of mRNA_F-distichus_contig102181.188.1 vs. uniprot
Match: A0A8J4PZF9_9MYCE (PKS_ER domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PZF9_9MYCE)

HSP 1 Score: 177 bits (449), Expect = 2.180e-51
Identity = 94/181 (51.93%), Postives = 115/181 (63.54%), Query Frame = 1
Query:    7 LQKCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGVAIIQMARDIGVRTINVVRERPPGDDTVELLKSLGADVVVTPSVLGNPGAFSRAVEGLALPKLGLNCTGGSIATSMALALDDGGVLVSYGGMSLRPTAIPGDVLQDRGLRCDGFWVTRWAQEHSREEREAMI 549
            L K P+DIPAE  AT+ +NP TAYRLL DFE L+ GD +IQN ANS VGV++IQ+A+  G++TINVVR     DD V+ LK LG D+VVT   +    AF R V  L  PKL LN  GGS AT +A  + D G LV+YGGMS  P  IP   L  R +   GFW+  W + HS  ER+AM 
Sbjct:  129 LFKAPADIPAEALATVSINPTTAYRLLNDFEKLKAGDVIIQNAANSMVGVSVIQIAKARGIKTINVVRNTGDIDDVVDHLKKLGGDIVVTEDYVRTQ-AFQRLVADLPRPKLALNAVGGSSATELARNVADNGTLVTYGGMSREPVTIPTSHLIFRNVNVRGFWLNNWFETHSAAERQAMF 308          
BLAST of mRNA_F-distichus_contig102181.188.1 vs. uniprot
Match: F0ZXZ0_DICPU (PKS_ER domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZXZ0_DICPU)

HSP 1 Score: 176 bits (447), Expect = 3.840e-51
Identity = 86/181 (47.51%), Postives = 117/181 (64.64%), Query Frame = 1
Query:    7 LQKCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGVAIIQMARDIGVRTINVVRERPPGDDTVELLKSLGADVVVTPSVLGNPGAFSRAVEGLALPKLGLNCTGGSIATSMALALDDGGVLVSYGGMSLRPTAIPGDVLQDRGLRCDGFWVTRWAQEHSREEREAMI 549
            L K P+DIPAEY AT+ +NP TAY LL+DF  L+EGD +IQN ANS VG++++Q+A+  G++TINV+R  P  +D V  +K LG D+VV+   +  P AF R +  L  PKL LN  GG+ AT +   L D G +V+YGGMS  P  IP   L  R ++  GFW+ RW  E+S  +R  +I
Sbjct:  124 LIKAPADIPAEYLATVSINPTTAYILLKDFVNLQEGDVIIQNAANSMVGLSVVQIAKSRGIKTINVIRNGPDFEDNVNRIKKLGGDIVVSDKYIRTP-AFQRLIADLPRPKLALNAVGGASATELVRILGDNGTIVTYGGMSREPVVIPTSHLVFRNIKSQGFWLNRWISENSLADRTKII 303          
BLAST of mRNA_F-distichus_contig102181.188.1 vs. uniprot
Match: A0A6A5C499_NAEFO (PKS_ER domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C499_NAEFO)

HSP 1 Score: 176 bits (445), Expect = 7.090e-51
Identity = 84/175 (48.00%), Postives = 117/175 (66.86%), Query Frame = 1
Query:   25 DIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGVAIIQMARDIGVRTINVVRERPPGDDTVELLKSLGADVVVTPSVLGNPGAFSRAVEGLALPKLGLNCTGGSIATSMALALDDGGVLVSYGGMSLRPTAIPGDVLQDRGLRCDGFWVTRWAQEHSREEREAMI 549
            D+P EYA+ + VNPCTAYRLL DF  L+ GD +IQNGANS VG+ +IQ+A+  G++TIN++R+RP  + TV+ LK LGAD+V+  S   N  + +R +  +  PKL LNC GG  A  +A  L D G++V+YGGMS +P  +P        +   GFW+T+W + HS+EER  MI
Sbjct:  126 DLPVEYASILSVNPCTAYRLLNDFVDLKPGDVIIQNGANSMVGLLVIQLAKMRGIQTINLIRQRPNYELTVQRLKELGADIVMPYSFSNNNTSMNRLLSDMPKPKLALNCVGGEAARVVAKYLADDGIMVTYGGMSKQPITVPTGPFIFNNITLKGFWMTKWVETHSKEERMKMI 300          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102181.188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCE2_9PHAE2.320e-10180.87PKS_ER domain-containing protein n=2 Tax=Ectocarpu... [more]
L8HDW9_ACACA1.160e-5755.25Oxidoreductase, zincbinding dehydrogenase, putativ... [more]
A0A6S9DR41_HETAK7.120e-5652.51Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Y1IFE2_KLENI1.880e-5551.38Mitochondrial Enoyl-ACP Synthase n=1 Tax=Klebsormi... [more]
D3BNI9_POLPP1.370e-5349.72Trans-2-enoyl-CoA reductase n=1 Tax=Polysphondyliu... [more]
UPI000644F83A5.320e-5350.28hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F4PH12_CAVFA7.230e-5248.89Trans-2-enoyl-CoA reductase n=1 Tax=Cavenderia fas... [more]
A0A8J4PZF9_9MYCE2.180e-5151.93PKS_ER domain-containing protein n=1 Tax=Polysphon... [more]
F0ZXZ0_DICPU3.840e-5147.51PKS_ER domain-containing protein n=1 Tax=Dictyoste... [more]
A0A6A5C499_NAEFO7.090e-5148.00PKS_ER domain-containing protein n=2 Tax=Naegleria... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig102181contigF-distichus_contig102181:271..2015 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score306.2
Seed ortholog evalue1e-80
Seed eggNOG ortholog2880.D8LGS4
Preferred nameMECR
KEGG rclassRC00005,RC00052
KEGG koko:K00344,ko:K07512,ko:K10777,ko:K12599
KEGG ReactionR00381,R01278,R03776,R03856,R03989,R04753,R06985,R07162
KEGG Pathwayko00062,ko01100,ko01212,ko03018,ko03450,map00062,map01100,map01212,map03018,map03450
KEGG ModuleM00085,M00392
Hectar predicted targeting categoryother localisation
GOsGO:0001655,GO:0001822,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006633,GO:0006635,GO:0007275,GO:0008134,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0009056,GO:0009058,GO:0009060,GO:0009062,GO:0009888,GO:0009987,GO:0015980,GO:0016042,GO:0016053,GO:0016054,GO:0016491,GO:0016627,GO:0016628,GO:0016631,GO:0016922,GO:0019166,GO:0019395,GO:0019752,GO:0030258,GO:0031974,GO:0032501,GO:0032502,GO:0032787,GO:0034440,GO:0035257,GO:0035295,GO:0039019,GO:0039020,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046394,GO:0046395,GO:0046872,GO:0046914,GO:0048513,GO:0048731,GO:0048793,GO:0048856,GO:0051427,GO:0055114,GO:0060429,GO:0061326,GO:0070013,GO:0071704,GO:0072001,GO:0072006,GO:0072009,GO:0072073,GO:0072080,GO:0072329,GO:0072330,GO:1901575,GO:1901576
EggNOG free text desc.fatty acid biosynthetic process
EggNOG OGsCOG0604@1,KOG0025@2759
EC1.3.1.38,1.6.5.5,6.5.1.1
COG Functional cat.C
BiGG ReactioniMM904.YBR026C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019,ko03400
Exons5
Model size549
Cds size546
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig102181.188.1prot_F-distichus_contig102181.188.1Fucus distichus monoicouspolypeptideF-distichus_contig102181 274..2015 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928936.7256522-UTR-F-distichus_contig102181:270..2731622928936.7256522-UTR-F-distichus_contig102181:270..273Fucus distichus monoicousUTRF-distichus_contig102181 271..273 +
1690885074.436073-UTR-F-distichus_contig102181:270..2731690885074.436073-UTR-F-distichus_contig102181:270..273Fucus distichus monoicousUTRF-distichus_contig102181 271..273 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928936.7443492-CDS-F-distichus_contig102181:273..4171622928936.7443492-CDS-F-distichus_contig102181:273..417Fucus distichus monoicousCDSF-distichus_contig102181 274..417 +
1690885074.4477942-CDS-F-distichus_contig102181:273..4171690885074.4477942-CDS-F-distichus_contig102181:273..417Fucus distichus monoicousCDSF-distichus_contig102181 274..417 +
1622928936.760407-CDS-F-distichus_contig102181:671..7391622928936.760407-CDS-F-distichus_contig102181:671..739Fucus distichus monoicousCDSF-distichus_contig102181 672..739 +
1690885074.4619112-CDS-F-distichus_contig102181:671..7391690885074.4619112-CDS-F-distichus_contig102181:671..739Fucus distichus monoicousCDSF-distichus_contig102181 672..739 +
1622928936.7743134-CDS-F-distichus_contig102181:1250..14131622928936.7743134-CDS-F-distichus_contig102181:1250..1413Fucus distichus monoicousCDSF-distichus_contig102181 1251..1413 +
1690885074.4785645-CDS-F-distichus_contig102181:1250..14131690885074.4785645-CDS-F-distichus_contig102181:1250..1413Fucus distichus monoicousCDSF-distichus_contig102181 1251..1413 +
1622928936.7881267-CDS-F-distichus_contig102181:1696..17861622928936.7881267-CDS-F-distichus_contig102181:1696..1786Fucus distichus monoicousCDSF-distichus_contig102181 1697..1786 +
1690885074.4935384-CDS-F-distichus_contig102181:1696..17861690885074.4935384-CDS-F-distichus_contig102181:1696..1786Fucus distichus monoicousCDSF-distichus_contig102181 1697..1786 +
1622928936.8057015-CDS-F-distichus_contig102181:1934..20151622928936.8057015-CDS-F-distichus_contig102181:1934..2015Fucus distichus monoicousCDSF-distichus_contig102181 1935..2015 +
1690885074.5062945-CDS-F-distichus_contig102181:1934..20151690885074.5062945-CDS-F-distichus_contig102181:1934..2015Fucus distichus monoicousCDSF-distichus_contig102181 1935..2015 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig102181.188.1

>prot_F-distichus_contig102181.188.1 ID=prot_F-distichus_contig102181.188.1|Name=mRNA_F-distichus_contig102181.188.1|organism=Fucus distichus monoicous|type=polypeptide|length=182bp
MLQKCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVG
VAIIQMARDIGVRTINVVRERPPGDDTVELLKSLGADVVVTPSVLGNPGA
FSRAVEGLALPKLGLNCTGGSIATSMALALDDGGVLVSYGGMSLRPTAIP
GDVLQDRGLRCDGFWVTRWAQEHSREEREAMI
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mRNA from alignment at F-distichus_contig102181:271..2015+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig102181.188.1 ID=mRNA_F-distichus_contig102181.188.1|Name=mRNA_F-distichus_contig102181.188.1|organism=Fucus distichus monoicous|type=mRNA|length=1745bp|location=Sequence derived from alignment at F-distichus_contig102181:271..2015+ (Fucus distichus monoicous)
GCAATGCTGCAGAAGTGTCCCTCGGACATTCCCGCGGAGTACGCGGCAAC CATCGGCGTCAACCCTTGCACGGCGTACCGCCTCCTGCGAGACTTCGAAA CCCTGCGCGAGGGTGACACCGTCATCCAGAACGGCGCAAACAGCCAGGTA CCCTAGAGCGTTGGAGAGTCCCGTGGAACCGAATCGCAGAAAGTTGACGC CGCGGGGTCCAATCAACTTGTTGTCTTCAGCGTCATATTCAAAGAAGAAA TACCCCGAAACGAGGCACGAACTGAGCAGTCGCCGCCACGCTATTGTTTG GCGGCAATGTACTTGTGCGATTTTAGTATCCAACGCGGCATTGCGCTTGT CTTTGTCCGCACGCGTGCCCCCTGGACGTCTGGTTCACGAAACCTCCAAA GGTGGGAGTGGCCATCATCCAAATGGCGAGAGACATCGGCGTGCGGACCA TCAACGTCGTACGAGAACGGTCAGTATTTTGTCCTATGCGTTGCGCCAAG GTTGATCGATATAAGGTGTGTGTGTATGTGTGTGTATTTATTAAATTGCA CATAACCGCGCAATTCGGTCCTGTTATCCTGTACATTCTATGCCACTCGC ATTGATCCTCCCGAGGGGGGATCAATGATACTTATGTGTGTGTGTGTGTG TGTGTGTGGCGGCGAAGATGGCAGGATTGCTCAAAATGTCATGGTGTATG TTCCCGACCGACTGTGATGGGTCACCGAGATGGCGGTAGAGCAATTATGT GTCGACTATCTGCTGCCAGACGTTCTCCAAATCAGCCAGGGCGAGCGAGG TGCTCACGAACCCCAAAGCGCCTTTTGACAACACCAGCAAGCGTATTGTG CCTTCTCCGTCTACAGCGCTCCTTTCGACTACGACAGGTACTCTTTTGGT TATTTTTGTTCCCTCTCAACCCGCACACCCTCGAACGCTCTCGAACCCTC ACATCATGCTGTGTGTTGCCCCGCGCGCAGGCCTCCCGGCGACGATACGG TGGAGCTTCTCAAATCTCTCGGAGCCGATGTCGTGGTAACACCGTCCGTT CTTGGAAACCCGGGGGCCTTCTCTCGCGCTGTGGAAGGGCTAGCGCTGCC GAAGCTGGGCCTTAACTGTACGGGGGGCTCCATAGCGACGTCGGTGAGGT CAAGCACGCCAACTCCTGGTCCTGATGATCAGCGTCCCCGCTACCAATCC CTTGGTGAAGGTGGTCCAAAATCTGTTTTTTTTTTGGGACCCCATGGTGC CATTGTGCTAATATTCCCATGTGGCCCTGGTGAGGTTTTTAAATCGGGAT TGGGGTTCTGCTACGCACGACTCCAGCGTTGTCATTGCCTCAAGAGTATC TACGCCTACTGTCCAAATGTTGCATCGAGGCACCAAGCGCGGTGCTCCCT GTTTTTTTCGTCCCCTTTCTGCGCAGATGGCGCTTGCGTTGGACGACGGA GGAGTTTTAGTGTCGTACGGAGGCATGTCTCTGCGGCCGACCGCGATTCC GGGGGATGTTTTGCAGGTTGGTTGACGAGAAAAGAGCTCCTTTTCGTCTC GCAAGCAACCTGCAACCTGTTACGGTCTCTTTCGTCCGAAACGAACGCAC TGCTGTGTCCGGTTGCCTTCGAGGCTGACAAGTAGAGCCACGTTCTCGCC GCACCCTCGTCCAGGATAGAGGGCTCCGATGCGACGGCTTCTGGGTGACG CGGTGGGCACAGGAGCACTCGCGTGAGGAGCGAGAGGCGATGATT
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Coding sequence (CDS) from alignment at F-distichus_contig102181:271..2015+

>mRNA_F-distichus_contig102181.188.1 ID=mRNA_F-distichus_contig102181.188.1|Name=mRNA_F-distichus_contig102181.188.1|organism=Fucus distichus monoicous|type=CDS|length=1092bp|location=Sequence derived from alignment at F-distichus_contig102181:271..2015+ (Fucus distichus monoicous)
ATGCTGCAGAAGTGTCCCTCGGACATTCCCGCGGAGTACGCGGCAACCAT
CGGCGTCAACCCTTGCACGGCGTACCGCCTCCTGCGAGACTTCGAAACCC
TGCGCGAGGGTGACACCGTCATCCAGAACGGCGCAAACAGCCAGATGCTG
CAGAAGTGTCCCTCGGACATTCCCGCGGAGTACGCGGCAACCATCGGCGT
CAACCCTTGCACGGCGTACCGCCTCCTGCGAGACTTCGAAACCCTGCGCG
AGGGTGACACCGTCATCCAGAACGGCGCAAACAGCCAGGTGGGAGTGGCC
ATCATCCAAATGGCGAGAGACATCGGCGTGCGGACCATCAACGTCGTACG
AGAACGGTGGGAGTGGCCATCATCCAAATGGCGAGAGACATCGGCGTGCG
GACCATCAACGTCGTACGAGAACGGCCTCCCGGCGACGATACGGTGGAGC
TTCTCAAATCTCTCGGAGCCGATGTCGTGGTAACACCGTCCGTTCTTGGA
AACCCGGGGGCCTTCTCTCGCGCTGTGGAAGGGCTAGCGCTGCCGAAGCT
GGGCCTTAACTGTACGGGGGGCTCCATAGCGACGTCGGCCTCCCGGCGAC
GATACGGTGGAGCTTCTCAAATCTCTCGGAGCCGATGTCGTGGTAACACC
GTCCGTTCTTGGAAACCCGGGGGCCTTCTCTCGCGCTGTGGAAGGGCTAG
CGCTGCCGAAGCTGGGCCTTAACTGTACGGGGGGCTCCATAGCGACGTCG
ATGGCGCTTGCGTTGGACGACGGAGGAGTTTTAGTGTCGTACGGAGGCAT
GTCTCTGCGGCCGACCGCGATTCCGGGGGATGTTTTGCAGATGGCGCTTG
CGTTGGACGACGGAGGAGTTTTAGTGTCGTACGGAGGCATGTCTCTGCGG
CCGACCGCGATTCCGGGGGATGTTTTGCAGGATAGAGGGCTCCGATGCGA
CGGCTTCTGGGTGACGCGGTGGGCACAGGAGCACTCGCGTGAGGAGCGAG
AGGCGATGATTGATAGAGGGCTCCGATGCGACGGCTTCTGGGTGACGCGG
TGGGCACAGGAGCACTCGCGTGAGGAGCGAGAGGCGATGATT
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