mRNA_F-distichus_contig10218.186.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10218.186.1
Unique NamemRNA_F-distichus_contig10218.186.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 1.670e-115
Identity = 218/367 (59.40%), Postives = 251/367 (68.39%), Query Frame = 1
Query:    1 QDFFYEPIAGLSRSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEGMIVLVTGRRVMMVHGKVDGRANPSSA----------AARHSYGLVEWEVDFGLVVCLETDEQEGRANPVRAPGARQQVRAGGDRSDGDGDLDSSETCLWLYHVPDLCEEANGRDGG---RRMGELNGASACLPSLRIERRVMPCMDRGQASQVCRVLSRQVGGLRC 1062
            +DFFYEPIAGLSRSPFGF    G+FKGTSSLVRR+LYSVTDTTDRIVSS+SSGILASGAVDV V+GG GV RP G LDGVMLGV GAV++PL+GL  GGFSGM TGL TG +GLVLRPTYG +MSTS LC  +S  LDPRLD++QKLRMLR RPPRFFRSR+QVLS YSR ENIG ELLSRV MGRYRSDGY+WH  I E MIVLVTGRRV+M+HG  DG    S+A            RH+YG+VEWEVDF LVV LE                                  S E+ L +YH PDL  E +G+ G              + + ++R+ERRV+ C+DRGQA Q+  VLS+QV    C
Sbjct: 4881 KDFFYEPIAGLSRSPFGFAT--GLFKGTSSLVRRTLYSVTDTTDRIVSSVSSGILASGAVDVSVRGGTGVVRPFGALDGVMLGVAGAVREPLMGLSLGGFSGMATGLFTGWVGLVLRPTYGALMSTSHLCHFVSGQLDPRLDSEQKLRMLRTRPPRFFRSREQVLSVYSRSENIGVELLSRVHMGRYRSDGYVWHAAI-EDMIVLVTGRRVLMLHG--DGGVKGSAADXXXXXXXXXXXRHTYGVVEWEVDFRLVVWLEIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSEESALSIYHFPDLAAEPSGKWGAGXXXXXXXXXXXXSAVAAIRLERRVVACVDRGQALQIHGVLSKQVSAHGC 5242          
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: A0A6H5JKL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL9_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 5.270e-80
Identity = 173/338 (51.18%), Postives = 205/338 (60.65%), Query Frame = 1
Query:   76 KGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEGMIVLVTGRRVMMVHGK--VDGRANPSSAAAR--HSYGLVEWEVDFGLVVCLETDEQEGRANPVRAPGARQQVRAGGDRSDGDGDLD--SSETCLWLYHVPDLCEEANGRDGG---RRMGELNGASACLPSLRIERRVMPCMDRGQASQVCRVLSRQVGGLRC 1062
            KGTSSLVRR+LYSVTDTTDRIVSS+SSGILASGAVDV V+GG GV RP G LDGVMLGV GAV++PL+GL  GGFSGMVTGL TG +GLVLRPTYG +MSTS                                    VLS YSR ENIGEELLSRV MGRYRSDGY+WH  I E MIVLVTGRRV+M+HG   V G A+ +S+++R  H+YG+VEWEV+F LVV +E                                    S E+ L +YH PDL  E +G+ G                + ++R+ERRV+ C+DRGQA Q+  VLS+QV    C
Sbjct: 4216 KGTSSLVRRTLYSVTDTTDRIVSSVSSGILASGAVDVSVRGGTGVVRPFGALDGVMLGVAGAVREPLMGLSLGGFSGMVTGLFTGWVGLVLRPTYGALMSTSH-----------------------------------VLSVYSRSENIGEELLSRVHMGRYRSDGYVWHAAI-EDMIVLVTGRRVLMLHGDGGVKGSADTTSSSSRTRHTYGVVEWEVEFRLVVWIEIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSEESTLSIYHFPDLAAEPSGKWGAGXXXXXXXXXXXXXXVAAIRLERRVVACVDRGQALQIHGVLSKQVSAHGC 4517          
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: A0A482SYV1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SYV1_9ARCH)

HSP 1 Score: 119 bits (298), Expect = 1.060e-25
Identity = 87/278 (31.29%), Postives = 132/278 (47.48%), Query Frame = 1
Query:    4 DFFYEPIAGLSRSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVD---VLVQGGGG-------------------------VKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEGMIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEVDFGLVVCLETD 753
            DF + P  GL  SP  F    GV +G+SSLVR  + S   T   +++S+  G++A GAVD   V+ +   G                           RP   L+ + + +TG V DP+ G ++ G  G V G   G +GL  RP YG + +     + +S  L PR   +QKLR+ R RPPR+F S    L  YS +EN G E+L++++ G YR + YLWH    +   +L+T  RV+++    +  +       +H   L   E+D+      E D
Sbjct: 3591 DFIHLPTVGLLSSPEDFAL--GVLRGSSSLVRNVVASCCATAGHLMNSLQVGLIALGAVDSYPVIDRDSSGDANNRDNNSKTSSPAGALSVVEKRRTYRPASSLEAMRMAITGLVTDPMAGFQTDGVRGFVIGFAKGGVGLFARPLYGILGAGCLTMEQVSFRLLPRYLANQKLRLTRARPPRYFLSPTIPLQIYSADENKGLEILAKLQQGAYRHEEYLWHGHTVDNRSILLTKVRVLILQENFEVLSVTWQCLVKHILSL---ELDYSSSRPTEVD 3863          
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: K3WU58_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU58_GLOUD)

HSP 1 Score: 118 bits (295), Expect = 2.630e-25
Identity = 83/250 (33.20%), Postives = 132/250 (52.80%), Query Frame = 1
Query:    1 QDFFYEPIAGLSRSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEGMIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEVDFGLVVCLET 750
            QDF YEP  G+S+SP  F F  G+ +GT SLVR S+Y+  D   RI+++ S G+  +    + +    G    +    G   G++G V  P+  +   G  G++ G+  G  GLVL+P  G  ++ +     L   +DP    + K  + R RPPRF   R + L  YS  E++GEE++S++R GRYR+DGYL H  +K+    LVT +R++++  +   + +            VEWE+    VV +E+
Sbjct: 4019 QDFIYEPAYGISKSPQEFAF--GMGRGTLSLVRASVYTFLDFNSRILTASSLGLSEA---CLKLDDYTGYPATRNIYQGFAQGISGIVVSPIHSVEVNGIRGVIPGIFAGVFGLVLKPLLGISLAAATTTATLRDAVDP----NTKALLRRVRPPRFIDFRTRRLKVYSYIESLGEEIVSKLRGGRYRADGYLGHVDLKQKCF-LVTRKRILLLDVRGSQKYD------------VEWELLADEVVMIES 4246          
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: A0A5D6Y466_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y466_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.150e-21
Identity = 77/254 (30.31%), Postives = 130/254 (51.18%), Query Frame = 1
Query:    1 QDFFYEPIAGLSRSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEGMIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEVDFGLVVCLETDEQE 762
            QDF YEP  G+++SP  F  V GV +G+ SLVR S+Y+  D   RI+++ + G+  +    V +    G    +    G   G++G V  P+  +   G  G+V            +P  G  ++ +     L   +DP    + K  ++R RPPRF   R + L  YS  E++GEE++S++R GRYR DGY+ H  +++  + LVT +R+M++  +  G +  SS+        VEWE+    V+ + +  ++
Sbjct: 3978 QDFIYEPAYGIAKSPTDF--VLGVGRGSLSLVRASVYTFLDFNSRILTASALGLAEA---CVKLDDYTGYPATRNIYQGFAQGISGLVVSPIHSVEMNGVRGVVPXXXXXXXXXXXKPLLGISLAAATTTATLRDAIDP----NTKALLMRVRPPRFIDLRTRRLKVYSYVESLGEEIVSKLRGGRYRGDGYVGHVDLRQKCL-LVTRKRIMLLAVRGGGESGASSSLQYD----VEWELLAEEVILIASKGED 4217          
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: W2QWX9_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2QWX9_PHYPN)

HSP 1 Score: 101 bits (252), Expect = 1.000e-19
Identity = 100/342 (29.24%), Postives = 151/342 (44.15%), Query Frame = 1
Query:    1 QDFFYEPIAGLS-RSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEG-MIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEVDFGLVVCLETDEQEGRANPVRAPGARQQVRAGGDRSDGDGDLDSSETCLWLYHVPDLCEEANGRDGGRRMGELNGASACLPSLRIERRVMPCMDRGQASQ 1020
            QDFF EP  GLS RSP  F F  GV +G+ SLVR S+Y+  D   RI+++ S G+  +    + +    G    +    G++ GV+G V  P+      G  G++                G  ++T+     L   +DP    + K  ++R RPPR    R + L  YS  E++GEE++ ++R GRYR+DGYL H  +K      LVT +R++ ++ K  G A  +          VEWE+  G VV ++           R P                      E  + +Y++ D    A+G   GR     NG++A   S    RR  P + RG   Q
Sbjct: 4048 QDFFSEPAHGLSQRSPQAFAF--GVGRGSLSLVRASVYTFLDFNTRILTAFSLGLSEA---CLKLDDYTGYPATRHIFQGLVQGVSGIVVAPIHSFEVNGARGVLXXXXXXXXXXXXXXXLGFSLATATTAVTLRDAIDP----NTKALLVRVRPPRHIDLRTKRLKVYSYVESLGEEIVGKIRGGRYRTDGYLGHVDLKTTHQCFLVTRKRILFLNVKSTGSAQTTKYD-------VEWELLAGEVVMVDCS---------RTP---------------------DEQIVTIYYMEDEFRTASG--AGRSASAANGSNAVTTS----RRRTPGIPRGMFLQ 4337          
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: A0A8J5IS34_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IS34_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.780e-18
Identity = 99/342 (28.95%), Postives = 151/342 (44.15%), Query Frame = 1
Query:    1 QDFFYEPIAGLS-RSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEG-MIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEVDFGLVVCLETDEQEGRANPVRAPGARQQVRAGGDRSDGDGDLDSSETCLWLYHVPDLCEEANGRDGGRRMGELNGASACLPSLRIERRVMPCMDRGQASQ 1020
            QDF  EP  GLS RSP  F F  GV +G+ SLVR S+Y+  D   RI+++ S G+  +    + +    G    +    G++ GV+G V  P+      G  G                  G  ++T+     L   +DP    + K  ++R RPPR    R + L  YS  E++GEE++ ++R GRYR+DGYL H  +K      LVT +R++ ++ K        +A+A+ +   VEWE+    VV ++           R P                      E  + +Y++ D    A+G   GR  G  NG++A   S    RR  P + RG   Q
Sbjct: 1453 QDFISEPAHGLSQRSPQAFAF--GVGRGSLSLVRASVYTFLDFNTRILTAFSLGLSEA---CLKLDDYTGYPATRHIFQGLVQGVSGVVVAPIHSFEVNGARGXXXXXXXXXXXXXXXXXLGFSLATATTAATLRDAIDP----NTKALLVRVRPPRHIDLRTKRLKVYSYVESLGEEIVGKIRGGRYRADGYLGHVDLKATHQCFLVTRKRILFLNVK-------GAASAQTTKYDVEWELLAEEVVMVDCS---------RTP---------------------DEQIVTIYYMEDEFRTASG--AGRSAGAANGSNAVTTS----RRRTPGIPRGMFLQ 1742          
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: A0A3M6VM54_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VM54_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 7.040e-18
Identity = 92/326 (28.22%), Postives = 150/326 (46.01%), Query Frame = 1
Query:    1 QDFFYEPIAGLS-RSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEG-MIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEVDFGLVVCLETDEQEGRANPVRAPGARQQVRAGGDRSDGDGDLDSSETCLWLYHVPDLCEEANGRDGGRRMGELNGASACLPSLR 972
            QDF  EP  GLS RSP  F F  G+ +G+ SL+R S+Y+  D   RI++++S G+  +    + +    G    +    G++ GV+G V  P+      G  G+                 G  ++T+     L   +DP    + K+ ++R RPPR    R + L  YS  E++GEE++ +VR GRYR DGYL H  +K      LVT +R++ ++  V G A   +A     Y  V+WE+    VV ++           +AP                     +E  + +Y++ D    A+G   GR +G  +G++  + S+R
Sbjct:  753 QDFISEPAHGLSQRSPRAFAF--GIGRGSLSLMRASVYTFLDFNTRILTAVSLGLFEA---CLKLDDYTGYPATRHIFQGLVQGVSGVVVAPIHSFEVNGARGVXXXXXXXXXXXXXXXXXGFSLATATTAATLRDAVDP----NTKVLLVRVRPPRHIDLRTKRLKVYSYVESLGEEIVGKVRGGRYRGDGYLGHVDLKTAHQCFLVTRKRILFLN--VRGTAPTQTA----KYD-VQWELLAEEVVMVDCS---------KAP---------------------TEQTITIYYMEDEFRAASG--AGRSIGGASGSNTVITSMR 1030          
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: A0A2D4BSW3_PYTIN (ABC transmembrane type-1 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSW3_PYTIN)

HSP 1 Score: 95.5 bits (236), Expect = 1.060e-17
Identity = 75/239 (31.38%), Postives = 112/239 (46.86%), Query Frame = 1
Query:    1 QDFFYEPIAGLSRSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGIL-ASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEGMIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEW 714
             DF  EP  G+S+SP  F    G+ +GT SL+R S+Y++ D   RI+++ S G+  A   +D       G    +    G   G++G V  P+  +   G  G                  G  ++T+     L   +DP    + K  ++R RPPR    R + L  YS  E +GEEL+ ++R GRYR DGYL H  +++  ++ VT +RVMMV  K   R         +   LVEW
Sbjct: 1637 HDFISEPAHGISKSPREFAM--GMGRGTYSLMRASVYTILDFNARILTASSLGLSEACLKLDEYT----GYPATRNIYQGFAQGISGIVVSPIRAVEFNGVRGXXXXXXXXXXXXXXXXLLGLSLATATTLGTLRDAIDP----NTKALLMRVRPPRHIDMRTRRLKVYSYVEALGEELVGKIRGGRYRGDGYLGHVDLRQKCLI-VTRKRVMMVDVKASHRFEVDWELTSNEIVLVEW 1864          
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: A0A662Y741_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y741_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.380e-17
Identity = 79/259 (30.50%), Postives = 127/259 (49.03%), Query Frame = 1
Query:    1 QDFFYEPIAGLS-RSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIK-EGMIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEV---DFGLVVCLETDEQE 762
            QDF  EP  GL+ RSP  F F  GV +G+ SLVR S+Y+V D   RI+++ S G+  +    + +    G    +    G++ GV+G V  P+      G  G++                G  ++T+     L   +DP    + K  ++R RPPR    R + L  YS  E++GEE++ ++R GRYR+DGYL H  +K      LVT +RV+ ++ K        +A  + +   V+WE+   +  +V C  T  ++
Sbjct: 1235 QDFISEPAHGLTQRSPQAFAF--GVGRGSLSLVRASVYTVLDFNTRILTAFSLGLSEA---CLKLDDYTGYPATRHIFQGLVQGVSGVVVAPIHSFEVNGMRGVLXXXXXXXXXXXXXXXLGFSLATATTAATLRDAVDP----NTKALLVRARPPRHISLRTRRLKVYSYVESLGEEIVGKIRGGRYRADGYLGHVDLKLSHQCFLVTRKRVLFLNVK-------GAAVTQTTKYDVQWELLAEEVVMVDCSRTPSEQ 1477          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP20_ECTSI1.670e-11559.40Vacuolar protein sorting-associated protein, putat... [more]
A0A6H5JKL9_9PHAE5.270e-8051.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482SYV1_9ARCH1.060e-2531.29Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
K3WU58_GLOUD2.630e-2533.20Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6Y466_9STRA1.150e-2130.31Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
W2QWX9_PHYPN1.000e-1929.24Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A8J5IS34_9STRA1.780e-1828.95Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A3M6VM54_9STRA7.040e-1828.22Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A2D4BSW3_PYTIN1.060e-1731.38ABC transmembrane type-1 domain-containing protein... [more]
A0A662Y741_9STRA1.380e-1730.50Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10218contigF-distichus_contig10218:7162..10973 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score386.0
Seed ortholog evalue1.9e-104
Seed eggNOG ortholog2880.D8LP20
KEGG koko:K19525
Hectar predicted targeting categoryother localisation
GOsGO:0000045,GO:0006810,GO:0006914,GO:0006996,GO:0007033,GO:0007034,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016043,GO:0016192,GO:0016236,GO:0022607,GO:0030587,GO:0031154,GO:0032502,GO:0044085,GO:0044237,GO:0044248,GO:0045324,GO:0046907,GO:0048856,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051703,GO:0051704,GO:0061919,GO:0070925,GO:0071840,GO:0090702,GO:0099120,GO:1905037
EggNOG free text desc.regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
EggNOG OGsCOG5043@1,KOG1809@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons7
Model size1062
Cds size1062
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928936.4385538-CDS-F-distichus_contig10218:7161..72661622928936.4385538-CDS-F-distichus_contig10218:7161..7266Fucus distichus monoicousCDSF-distichus_contig10218 7162..7266 -
1690885074.2891145-CDS-F-distichus_contig10218:7161..72661690885074.2891145-CDS-F-distichus_contig10218:7161..7266Fucus distichus monoicousCDSF-distichus_contig10218 7162..7266 -
1622928936.462293-CDS-F-distichus_contig10218:8160..85201622928936.462293-CDS-F-distichus_contig10218:8160..8520Fucus distichus monoicousCDSF-distichus_contig10218 8161..8520 -
1690885074.3008044-CDS-F-distichus_contig10218:8160..85201690885074.3008044-CDS-F-distichus_contig10218:8160..8520Fucus distichus monoicousCDSF-distichus_contig10218 8161..8520 -
1622928936.4787056-CDS-F-distichus_contig10218:8995..91031622928936.4787056-CDS-F-distichus_contig10218:8995..9103Fucus distichus monoicousCDSF-distichus_contig10218 8996..9103 -
1690885074.3112257-CDS-F-distichus_contig10218:8995..91031690885074.3112257-CDS-F-distichus_contig10218:8995..9103Fucus distichus monoicousCDSF-distichus_contig10218 8996..9103 -
1622928936.490391-CDS-F-distichus_contig10218:9398..95031622928936.490391-CDS-F-distichus_contig10218:9398..9503Fucus distichus monoicousCDSF-distichus_contig10218 9399..9503 -
1690885074.3200948-CDS-F-distichus_contig10218:9398..95031690885074.3200948-CDS-F-distichus_contig10218:9398..9503Fucus distichus monoicousCDSF-distichus_contig10218 9399..9503 -
1622928936.5129004-CDS-F-distichus_contig10218:9841..99901622928936.5129004-CDS-F-distichus_contig10218:9841..9990Fucus distichus monoicousCDSF-distichus_contig10218 9842..9990 -
1690885074.3286214-CDS-F-distichus_contig10218:9841..99901690885074.3286214-CDS-F-distichus_contig10218:9841..9990Fucus distichus monoicousCDSF-distichus_contig10218 9842..9990 -
1622928936.5314589-CDS-F-distichus_contig10218:10271..104281622928936.5314589-CDS-F-distichus_contig10218:10271..10428Fucus distichus monoicousCDSF-distichus_contig10218 10272..10428 -
1690885074.3473837-CDS-F-distichus_contig10218:10271..104281690885074.3473837-CDS-F-distichus_contig10218:10271..10428Fucus distichus monoicousCDSF-distichus_contig10218 10272..10428 -
1622928936.55105-CDS-F-distichus_contig10218:10895..109731622928936.55105-CDS-F-distichus_contig10218:10895..10973Fucus distichus monoicousCDSF-distichus_contig10218 10896..10973 -
1690885074.3602028-CDS-F-distichus_contig10218:10895..109731690885074.3602028-CDS-F-distichus_contig10218:10895..10973Fucus distichus monoicousCDSF-distichus_contig10218 10896..10973 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10218.186.1prot_F-distichus_contig10218.186.1Fucus distichus monoicouspolypeptideF-distichus_contig10218 7162..10973 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10218.186.1

>prot_F-distichus_contig10218.186.1 ID=prot_F-distichus_contig10218.186.1|Name=mRNA_F-distichus_contig10218.186.1|organism=Fucus distichus monoicous|type=polypeptide|length=354bp
QDFFYEPIAGLSRSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSI
SSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGF
SGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRML
RNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKE
GMIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEVDFGLVVCLET
DEQEGRANPVRAPGARQQVRAGGDRSDGDGDLDSSETCLWLYHVPDLCEE
ANGRDGGRRMGELNGASACLPSLRIERRVMPCMDRGQASQVCRVLSRQVG
GLRC
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mRNA from alignment at F-distichus_contig10218:7162..10973-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10218.186.1 ID=mRNA_F-distichus_contig10218.186.1|Name=mRNA_F-distichus_contig10218.186.1|organism=Fucus distichus monoicous|type=mRNA|length=3812bp|location=Sequence derived from alignment at F-distichus_contig10218:7162..10973- (Fucus distichus monoicous)
CAGGACTTCTTTTACGAGCCGATTGCCGGCCTCAGTCGTAGCCCCTTCGG TTTCGGTTTCGTGTTTGGCGTGTTCAAGGTAAGCGAGGCCCAAGGTGGGC CGTCGACGGCGTGTCTTGTTCTACCGCGCGGTGAAGCGCTTCGAACAAAA GCACTTGACACAGTCTTGCGCGTGCCCAAACGTTCGGGCAGTAAAGAAGA CAAGCAGATGAAAATCACCGAACGCCGGCGTGACCGTGACAGCCTAACGC GCTGTTTCAACCCGGCGGTGGAAAGGGTCGTATTAACCGAACCCGCGACG CGACCCATATCGGTCGCCCTCCGAGAATCGCGGCTTGGAAATTCTTACCG AACGGAGGCTTGGTTACCTCTCTCCCCCTCTCGCTCTCCTCGCCCGACGA CACCTCGAGACTCTCCCGTCATTTGTATCATTAGCAATACTTTTTTACCT CTCGACGTGCTATGTCTTATGCCTCCTGTGCTGTACTGCGTGTTTTACGT GTGCGTTCCTCCGTTTGTGGCCTGCTGACACATGACACACCATAGGGCAC GTCCAGCCTTGTTCGCCGCTCTTTGTACTCTGTGACGGACACGACGGACC GCATCGTCTCGTCGATTTCTTCGGGAATACTCGCATCCGGCGCTGTGGAC GTGCTAGTCCAAGGCGGCGGCGGGGTGAAGAGACCTCAAGGGCCCCTGGA TGGTGAGACTGGGGGGTTAGTTCGTGACAGCATCTGGGTACACTTTTAGT TTACAACAATATTACAACAATAACATGTCGTTACTACACACTACTCTGCG CCTGTTTTGGCGCGCGAGGTGCCGTGATCCCACGTACAGGTCTAAAACGC TTGCTTTTTTTCTTTTTCTTTTTTGCCCCAAAGGTTGGGCGACCAAACCA TTTCAAACAAACAAAAATACGCCCGCAGGATAATTTATTTTAATTCGTCT TGGTATTTCCTGTTTCTGCGCCTGTGCCCGCAGGCGTCATGCTTGGAGTG ACGGGAGCGGTGAAAGACCCTCTTCTTGGGCTTCGTTCTGGCGGGTTTTC GGGCATGGTCACGGGGCTTGTTACGGGATCTATAGGGCTCGTTCTCAGAC CCACTTATGGGACGATGATGTCCACGTCGCAGGTGAGGAAGACGTCGCGC GCGTACCTTAAGCGTTCTGAAGCGTGTGTGCGCGGGGTCCGTAAAATATC CCAACAGTCTGTACCATTCAATCTCTGCGTTTTTCCTTTTCAATAATACT TGCTGCGCTTGCCCATCTTAAAGTGAAATACTAAACAGTGTACTACAGCG GACAGCATTTGTCTCTTGGAGCGTAGAGCTACATTATTCCACTTGGTGTT GAATCTTGTTGAATCGTTTACCCCGTTTTCCTCTTGTGCGCGTCTGTCGG TCGTCGGTCGTCTGTCGTCGGTCTTCTGTCGTCGTGCGGTCGGTCCCTTC GCGGCGACGAACGGGAGCAGCTGTGTCAGGTCCTGTCGGCCTACCTGGAC CCTCGCCTCGACAACGATCAGAAGCTCCGAATGCTCCGGAACAGGCCACC GCGATTCTTTCGCTCACGTCAACAGGTAATGGCCACCTTCGAGATATTAA TAGATAGTACCAGTACTGTACTCCCGAGAGATGTTCGATAGAGCCACGAG AACGTAGCCTCCCCTCCCTTCCCCGCAGCCGCTCCGTCGTTGTCGTTGTC ATTGATGGCGTGTTCTCGCTCCCTCCCCCTCTTTCCTGCTGCCACGCCAC GAATGACAACGGCTACTAGTAGAAACTTTTTGTACCTTGTTTCTGCGTTT TCTGTAGAGGGCGTCAACGAAATAATCAAGCAAACGAACACGCGTCCGTC ATGTCCTTCGGTCTTGACAGGTTTTGTCCGCCTACTCGCGGGAGGAAAAT ATTGGCGAGGAGTTGCTTTCGCGTGTGCGTATGGGCAGATACCGCTCAGA CGGCTACCTTTGGCACACCACCATCAAGGTACCCGTAGCGTGTTAGGGTT TGCCGCCTCTCGACCGAAATGTCATACCTGGTATGTTGGTACCCTGAAAC TAGAATACAGTACCTGCGATGCGACGCCGTCTGGGAATTGAGCTTCAGCG ACTGTCGAGGGCAGTCAGTCAGGAAAGGGAGCCACGAGTAATGGAACTTG ACTATATATTTTGGGTACACTGTAGGTGCAAGCAAGTCTGGTGGTAGTTG ACGCGATGACGTCATCACGGGATGATGCGGTGGAAGTGGGATGACGTCAT CACCGGTAGAACGATCGATGCCGGCTCTTTCGTTTTGGGTATGTAGTGTG TAGTCTATAGGGCAGCAGCGCTTTCGGTATCATCGTACAGTACCAGACGC TTGCTGAAGTCGCGTAGCCGCCCTTTGTTACATTTTCGTGTTGGTGTTGC TCTGACGTTGCTGACACACGTACATGTGTCTTAATATTTATTTTTCGCAT CAGGAGGGTATGATCGTCCTGGTGACGGGCCGTCGAGTCATGATGGTTCA CGGCAAGGTTGATGGCCGCGCCAACCCCTCGTCAGCAGCAGCGAGGCACT CATACGGCCTCGTGGAGTGGGAGGTGGACTTTGGACTGGTGGTTTGCCTG GAAACGGACGAACAAGAGGGCAGAGCGAACCCTGTCCGCGCCCCTGGTGC TCGACAGCAAGTTCGGGCTGGAGGAGACAGGAGCGATGGTGATGGTGATC TTGATAGCTCTGAGACATGTCTGTGGCTGTACCACGTTCCGGACCTGTGC GAAGAGGCTAACGGTCGAGATGGAGGTCGTCGCATGGGTGAGTTGAACGG GGCATCAGCATGCGTTTGGCCACATGCCGTGCCGTATGAGAATGGGCAAT TTTTTTGTCACCTGCGGGGAGCGGAGGTAGCTATCTACGGTACCAGTATA CTATACTAATGTATACTAATAGAGGTAGCTTTTCGTTTGGTGGTTCTATT TTCTGTTTACTAAGTTAACCTACTGCATGGGATTTTCCCGTTTGAGACAT TTGAGACATTTGAGACACCGACTGGGCATGGCGCGCGAAGCTGGTTCGTA GTGTAAGTGAATGAAGAGCAGGTGCGATCATGTCTCAAAAAATTCCGGAG TTTTCTGCTCGTACTGTTACATAGTGTCTGTCTCGTCTCTTTTACTTGGT TTTTTTATTTTTATTTTTTTATCACACTTAAGGCCGATGGACCTCTAATT ACCATCCTGCCTGTGGTCACAAAGGTTCTTCCCATCTCTCCCCGGTTTAC GCCTTACAAATTGTCAACCAATGGTTGAATTTTACGTACTCACGTTCCCA CGCTTTCCGTTACGAAAGAAATAACACAAATACTACTCTGGTAAGAATCG AACTCACGACTTCCGCACTAGCAGGTATGCAGGTTACCTACTAGACCACT CGGGCGACGAATGCATTAAAATAACATAAGGCCTTGAGTGTATTAATATG AATATCTCTAGCTGGATTAAGGCCTTAATATATAACAAATGTGTCTACTC CAGTGGTTGAGTCCTTTTGAGTTTGTGTAACATGTTGGTTTCCCTCGATA TTTGCACATCGAAGATTATTACATATATACTGTATTTTTTTGTATCTTTT TTTTGAAGAAAATACAGAACGCACCTAGACCTATGACAGCGGAGGTTTCC TTTCATCATTATTTGTGGTTGGACCCGGATGTGTCGCAAGCAGGTTACAG TTACAAGCTACCATCATTACGCATCGAGCGGCGGGTGATGCCTTGTATGG ATCGTGGGCAAGCGTCGCAGGTCTGTCGCGTGCTCTCTAGACAGGTGGGT GGGCTTCGATGT
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Coding sequence (CDS) from alignment at F-distichus_contig10218:7162..10973-

>mRNA_F-distichus_contig10218.186.1 ID=mRNA_F-distichus_contig10218.186.1|Name=mRNA_F-distichus_contig10218.186.1|organism=Fucus distichus monoicous|type=CDS|length=2124bp|location=Sequence derived from alignment at F-distichus_contig10218:7162..10973- (Fucus distichus monoicous)
CAGGACTTCTTTTACGAGCCGATTGCCGGCCTCAGTCGTAGCCCCTTCGG
TTTCGGTTTCGTGTTTGGCGTGTTCAAGCAGGACTTCTTTTACGAGCCGA
TTGCCGGCCTCAGTCGTAGCCCCTTCGGTTTCGGTTTCGTGTTTGGCGTG
TTCAAGGGCACGTCCAGCCTTGTTCGCCGCTCTTTGTACTCTGTGACGGA
CACGACGGACCGCATCGTCTCGTCGATTTCTTCGGGAATACTCGCATCCG
GCGCTGTGGACGTGCTAGTCCAAGGCGGCGGCGGGGTGAAGAGACCTCAA
GGGCCCCTGGATGGGCACGTCCAGCCTTGTTCGCCGCTCTTTGTACTCTG
TGACGGACACGACGGACCGCATCGTCTCGTCGATTTCTTCGGGAATACTC
GCATCCGGCGCTGTGGACGTGCTAGTCCAAGGCGGCGGCGGGGTGAAGAG
ACCTCAAGGGCCCCTGGATGGCGTCATGCTTGGAGTGACGGGAGCGGTGA
AAGACCCTCTTCTTGGGCTTCGTTCTGGCGGGTTTTCGGGCATGGTCACG
GGGCTTGTTACGGGATCTATAGGGCTCGTTCTCAGACCCACTTATGGGAC
GATGATGTCCACGTCGCAGGCGTCATGCTTGGAGTGACGGGAGCGGTGAA
AGACCCTCTTCTTGGGCTTCGTTCTGGCGGGTTTTCGGGCATGGTCACGG
GGCTTGTTACGGGATCTATAGGGCTCGTTCTCAGACCCACTTATGGGACG
ATGATGTCCACGTCGCAGCTGTGTCAGGTCCTGTCGGCCTACCTGGACCC
TCGCCTCGACAACGATCAGAAGCTCCGAATGCTCCGGAACAGGCCACCGC
GATTCTTTCGCTCACGTCAACAGCTGTGTCAGGTCCTGTCGGCCTACCTG
GACCCTCGCCTCGACAACGATCAGAAGCTCCGAATGCTCCGGAACAGGCC
ACCGCGATTCTTTCGCTCACGTCAACAGGTTTTGTCCGCCTACTCGCGGG
AGGAAAATATTGGCGAGGAGTTGCTTTCGCGTGTGCGTATGGGCAGATAC
CGCTCAGACGGCTACCTTTGGCACACCACCATCAAGGTTTTGTCCGCCTA
CTCGCGGGAGGAAAATATTGGCGAGGAGTTGCTTTCGCGTGTGCGTATGG
GCAGATACCGCTCAGACGGCTACCTTTGGCACACCACCATCAAGGAGGGT
ATGATCGTCCTGGTGACGGGCCGTCGAGTCATGATGGTTCACGGCAAGGT
TGATGGCCGCGCCAACCCCTCGTCAGCAGCAGCGAGGCACTCATACGGCC
TCGTGGAGTGGGAGGTGGACTTTGGACTGGTGGTTTGCCTGGAAACGGAC
GAACAAGAGGGCAGAGCGAACCCTGTCCGCGCCCCTGGTGCTCGACAGCA
AGTTCGGGCTGGAGGAGACAGGAGCGATGGTGATGGTGATCTTGATAGCT
CTGAGACATGTCTGTGGCTGTACCACGTTCCGGACCTGTGCGAAGAGGCT
AACGGTCGAGATGGAGGTCGTCGCATGGGTGAGTTGAACGGGGCATCAGC
ATGCGAGGGTATGATCGTCCTGGTGACGGGCCGTCGAGTCATGATGGTTC
ACGGCAAGGTTGATGGCCGCGCCAACCCCTCGTCAGCAGCAGCGAGGCAC
TCATACGGCCTCGTGGAGTGGGAGGTGGACTTTGGACTGGTGGTTTGCCT
GGAAACGGACGAACAAGAGGGCAGAGCGAACCCTGTCCGCGCCCCTGGTG
CTCGACAGCAAGTTCGGGCTGGAGGAGACAGGAGCGATGGTGATGGTGAT
CTTGATAGCTCTGAGACATGTCTGTGGCTGTACCACGTTCCGGACCTGTG
CGAAGAGGCTAACGGTCGAGATGGAGGTCGTCGCATGGGTGAGTTGAACG
GGGCATCAGCATGCCTACCATCATTACGCATCGAGCGGCGGGTGATGCCT
TGTATGGATCGTGGGCAAGCGTCGCAGGTCTGTCGCGTGCTCTCTAGACA
GGTGGGTGGGCTTCGATGTCTACCATCATTACGCATCGAGCGGCGGGTGA
TGCCTTGTATGGATCGTGGGCAAGCGTCGCAGGTCTGTCGCGTGCTCTCT
AGACAGGTGGGTGGGCTTCGATGT
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