mRNA_F-distichus_contig10218.186.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI) HSP 1 Score: 379 bits (972), Expect = 1.670e-115 Identity = 218/367 (59.40%), Postives = 251/367 (68.39%), Query Frame = 1
Query: 1 QDFFYEPIAGLSRSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEGMIVLVTGRRVMMVHGKVDGRANPSSA----------AARHSYGLVEWEVDFGLVVCLETDEQEGRANPVRAPGARQQVRAGGDRSDGDGDLDSSETCLWLYHVPDLCEEANGRDGG---RRMGELNGASACLPSLRIERRVMPCMDRGQASQVCRVLSRQVGGLRC 1062
+DFFYEPIAGLSRSPFGF G+FKGTSSLVRR+LYSVTDTTDRIVSS+SSGILASGAVDV V+GG GV RP G LDGVMLGV GAV++PL+GL GGFSGM TGL TG +GLVLRPTYG +MSTS LC +S LDPRLD++QKLRMLR RPPRFFRSR+QVLS YSR ENIG ELLSRV MGRYRSDGY+WH I E MIVLVTGRRV+M+HG DG S+A RH+YG+VEWEVDF LVV LE S E+ L +YH PDL E +G+ G + + ++R+ERRV+ C+DRGQA Q+ VLS+QV C
Sbjct: 4881 KDFFYEPIAGLSRSPFGFAT--GLFKGTSSLVRRTLYSVTDTTDRIVSSVSSGILASGAVDVSVRGGTGVVRPFGALDGVMLGVAGAVREPLMGLSLGGFSGMATGLFTGWVGLVLRPTYGALMSTSHLCHFVSGQLDPRLDSEQKLRMLRTRPPRFFRSREQVLSVYSRSENIGVELLSRVHMGRYRSDGYVWHAAI-EDMIVLVTGRRVLMLHG--DGGVKGSAADXXXXXXXXXXXRHTYGVVEWEVDFRLVVWLEIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSEESALSIYHFPDLAAEPSGKWGAGXXXXXXXXXXXXSAVAAIRLERRVVACVDRGQALQIHGVLSKQVSAHGC 5242
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: A0A6H5JKL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL9_9PHAE) HSP 1 Score: 276 bits (707), Expect = 5.270e-80 Identity = 173/338 (51.18%), Postives = 205/338 (60.65%), Query Frame = 1
Query: 76 KGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEGMIVLVTGRRVMMVHGK--VDGRANPSSAAAR--HSYGLVEWEVDFGLVVCLETDEQEGRANPVRAPGARQQVRAGGDRSDGDGDLD--SSETCLWLYHVPDLCEEANGRDGG---RRMGELNGASACLPSLRIERRVMPCMDRGQASQVCRVLSRQVGGLRC 1062
KGTSSLVRR+LYSVTDTTDRIVSS+SSGILASGAVDV V+GG GV RP G LDGVMLGV GAV++PL+GL GGFSGMVTGL TG +GLVLRPTYG +MSTS VLS YSR ENIGEELLSRV MGRYRSDGY+WH I E MIVLVTGRRV+M+HG V G A+ +S+++R H+YG+VEWEV+F LVV +E S E+ L +YH PDL E +G+ G + ++R+ERRV+ C+DRGQA Q+ VLS+QV C
Sbjct: 4216 KGTSSLVRRTLYSVTDTTDRIVSSVSSGILASGAVDVSVRGGTGVVRPFGALDGVMLGVAGAVREPLMGLSLGGFSGMVTGLFTGWVGLVLRPTYGALMSTSH-----------------------------------VLSVYSRSENIGEELLSRVHMGRYRSDGYVWHAAI-EDMIVLVTGRRVLMLHGDGGVKGSADTTSSSSRTRHTYGVVEWEVEFRLVVWIEIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSEESTLSIYHFPDLAAEPSGKWGAGXXXXXXXXXXXXXXVAAIRLERRVVACVDRGQALQIHGVLSKQVSAHGC 4517
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: A0A482SYV1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SYV1_9ARCH) HSP 1 Score: 119 bits (298), Expect = 1.060e-25 Identity = 87/278 (31.29%), Postives = 132/278 (47.48%), Query Frame = 1
Query: 4 DFFYEPIAGLSRSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVD---VLVQGGGG-------------------------VKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEGMIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEVDFGLVVCLETD 753
DF + P GL SP F GV +G+SSLVR + S T +++S+ G++A GAVD V+ + G RP L+ + + +TG V DP+ G ++ G G V G G +GL RP YG + + + +S L PR +QKLR+ R RPPR+F S L YS +EN G E+L++++ G YR + YLWH + +L+T RV+++ + + +H L E+D+ E D
Sbjct: 3591 DFIHLPTVGLLSSPEDFAL--GVLRGSSSLVRNVVASCCATAGHLMNSLQVGLIALGAVDSYPVIDRDSSGDANNRDNNSKTSSPAGALSVVEKRRTYRPASSLEAMRMAITGLVTDPMAGFQTDGVRGFVIGFAKGGVGLFARPLYGILGAGCLTMEQVSFRLLPRYLANQKLRLTRARPPRYFLSPTIPLQIYSADENKGLEILAKLQQGAYRHEEYLWHGHTVDNRSILLTKVRVLILQENFEVLSVTWQCLVKHILSL---ELDYSSSRPTEVD 3863
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: K3WU58_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU58_GLOUD) HSP 1 Score: 118 bits (295), Expect = 2.630e-25 Identity = 83/250 (33.20%), Postives = 132/250 (52.80%), Query Frame = 1
Query: 1 QDFFYEPIAGLSRSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEGMIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEVDFGLVVCLET 750
QDF YEP G+S+SP F F G+ +GT SLVR S+Y+ D RI+++ S G+ + + + G + G G++G V P+ + G G++ G+ G GLVL+P G ++ + L +DP + K + R RPPRF R + L YS E++GEE++S++R GRYR+DGYL H +K+ LVT +R++++ + + + VEWE+ VV +E+
Sbjct: 4019 QDFIYEPAYGISKSPQEFAF--GMGRGTLSLVRASVYTFLDFNSRILTASSLGLSEA---CLKLDDYTGYPATRNIYQGFAQGISGIVVSPIHSVEVNGIRGVIPGIFAGVFGLVLKPLLGISLAAATTTATLRDAVDP----NTKALLRRVRPPRFIDFRTRRLKVYSYIESLGEEIVSKLRGGRYRADGYLGHVDLKQKCF-LVTRKRILLLDVRGSQKYD------------VEWELLADEVVMIES 4246
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: A0A5D6Y466_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y466_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.150e-21 Identity = 77/254 (30.31%), Postives = 130/254 (51.18%), Query Frame = 1
Query: 1 QDFFYEPIAGLSRSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEGMIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEVDFGLVVCLETDEQE 762
QDF YEP G+++SP F V GV +G+ SLVR S+Y+ D RI+++ + G+ + V + G + G G++G V P+ + G G+V +P G ++ + L +DP + K ++R RPPRF R + L YS E++GEE++S++R GRYR DGY+ H +++ + LVT +R+M++ + G + SS+ VEWE+ V+ + + ++
Sbjct: 3978 QDFIYEPAYGIAKSPTDF--VLGVGRGSLSLVRASVYTFLDFNSRILTASALGLAEA---CVKLDDYTGYPATRNIYQGFAQGISGLVVSPIHSVEMNGVRGVVPXXXXXXXXXXXKPLLGISLAAATTTATLRDAIDP----NTKALLMRVRPPRFIDLRTRRLKVYSYVESLGEEIVSKLRGGRYRGDGYVGHVDLRQKCL-LVTRKRIMLLAVRGGGESGASSSLQYD----VEWELLAEEVILIASKGED 4217
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: W2QWX9_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2QWX9_PHYPN) HSP 1 Score: 101 bits (252), Expect = 1.000e-19 Identity = 100/342 (29.24%), Postives = 151/342 (44.15%), Query Frame = 1
Query: 1 QDFFYEPIAGLS-RSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEG-MIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEVDFGLVVCLETDEQEGRANPVRAPGARQQVRAGGDRSDGDGDLDSSETCLWLYHVPDLCEEANGRDGGRRMGELNGASACLPSLRIERRVMPCMDRGQASQ 1020
QDFF EP GLS RSP F F GV +G+ SLVR S+Y+ D RI+++ S G+ + + + G + G++ GV+G V P+ G G++ G ++T+ L +DP + K ++R RPPR R + L YS E++GEE++ ++R GRYR+DGYL H +K LVT +R++ ++ K G A + VEWE+ G VV ++ R P E + +Y++ D A+G GR NG++A S RR P + RG Q
Sbjct: 4048 QDFFSEPAHGLSQRSPQAFAF--GVGRGSLSLVRASVYTFLDFNTRILTAFSLGLSEA---CLKLDDYTGYPATRHIFQGLVQGVSGIVVAPIHSFEVNGARGVLXXXXXXXXXXXXXXXLGFSLATATTAVTLRDAIDP----NTKALLVRVRPPRHIDLRTKRLKVYSYVESLGEEIVGKIRGGRYRTDGYLGHVDLKTTHQCFLVTRKRILFLNVKSTGSAQTTKYD-------VEWELLAGEVVMVDCS---------RTP---------------------DEQIVTIYYMEDEFRTASG--AGRSASAANGSNAVTTS----RRRTPGIPRGMFLQ 4337
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: A0A8J5IS34_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IS34_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.780e-18 Identity = 99/342 (28.95%), Postives = 151/342 (44.15%), Query Frame = 1
Query: 1 QDFFYEPIAGLS-RSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEG-MIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEVDFGLVVCLETDEQEGRANPVRAPGARQQVRAGGDRSDGDGDLDSSETCLWLYHVPDLCEEANGRDGGRRMGELNGASACLPSLRIERRVMPCMDRGQASQ 1020
QDF EP GLS RSP F F GV +G+ SLVR S+Y+ D RI+++ S G+ + + + G + G++ GV+G V P+ G G G ++T+ L +DP + K ++R RPPR R + L YS E++GEE++ ++R GRYR+DGYL H +K LVT +R++ ++ K +A+A+ + VEWE+ VV ++ R P E + +Y++ D A+G GR G NG++A S RR P + RG Q
Sbjct: 1453 QDFISEPAHGLSQRSPQAFAF--GVGRGSLSLVRASVYTFLDFNTRILTAFSLGLSEA---CLKLDDYTGYPATRHIFQGLVQGVSGVVVAPIHSFEVNGARGXXXXXXXXXXXXXXXXXLGFSLATATTAATLRDAIDP----NTKALLVRVRPPRHIDLRTKRLKVYSYVESLGEEIVGKIRGGRYRADGYLGHVDLKATHQCFLVTRKRILFLNVK-------GAASAQTTKYDVEWELLAEEVVMVDCS---------RTP---------------------DEQIVTIYYMEDEFRTASG--AGRSAGAANGSNAVTTS----RRRTPGIPRGMFLQ 1742
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: A0A3M6VM54_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VM54_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 7.040e-18 Identity = 92/326 (28.22%), Postives = 150/326 (46.01%), Query Frame = 1
Query: 1 QDFFYEPIAGLS-RSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEG-MIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEVDFGLVVCLETDEQEGRANPVRAPGARQQVRAGGDRSDGDGDLDSSETCLWLYHVPDLCEEANGRDGGRRMGELNGASACLPSLR 972
QDF EP GLS RSP F F G+ +G+ SL+R S+Y+ D RI++++S G+ + + + G + G++ GV+G V P+ G G+ G ++T+ L +DP + K+ ++R RPPR R + L YS E++GEE++ +VR GRYR DGYL H +K LVT +R++ ++ V G A +A Y V+WE+ VV ++ +AP +E + +Y++ D A+G GR +G +G++ + S+R
Sbjct: 753 QDFISEPAHGLSQRSPRAFAF--GIGRGSLSLMRASVYTFLDFNTRILTAVSLGLFEA---CLKLDDYTGYPATRHIFQGLVQGVSGVVVAPIHSFEVNGARGVXXXXXXXXXXXXXXXXXGFSLATATTAATLRDAVDP----NTKVLLVRVRPPRHIDLRTKRLKVYSYVESLGEEIVGKVRGGRYRGDGYLGHVDLKTAHQCFLVTRKRILFLN--VRGTAPTQTA----KYD-VQWELLAEEVVMVDCS---------KAP---------------------TEQTITIYYMEDEFRAASG--AGRSIGGASGSNTVITSMR 1030
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: A0A2D4BSW3_PYTIN (ABC transmembrane type-1 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSW3_PYTIN) HSP 1 Score: 95.5 bits (236), Expect = 1.060e-17 Identity = 75/239 (31.38%), Postives = 112/239 (46.86%), Query Frame = 1
Query: 1 QDFFYEPIAGLSRSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGIL-ASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIKEGMIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEW 714
DF EP G+S+SP F G+ +GT SL+R S+Y++ D RI+++ S G+ A +D G + G G++G V P+ + G G G ++T+ L +DP + K ++R RPPR R + L YS E +GEEL+ ++R GRYR DGYL H +++ ++ VT +RVMMV K R + LVEW
Sbjct: 1637 HDFISEPAHGISKSPREFAM--GMGRGTYSLMRASVYTILDFNARILTASSLGLSEACLKLDEYT----GYPATRNIYQGFAQGISGIVVSPIRAVEFNGVRGXXXXXXXXXXXXXXXXLLGLSLATATTLGTLRDAIDP----NTKALLMRVRPPRHIDMRTRRLKVYSYVEALGEELVGKIRGGRYRGDGYLGHVDLRQKCLI-VTRKRVMMVDVKASHRFEVDWELTSNEIVLVEW 1864
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Match: A0A662Y741_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y741_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.380e-17 Identity = 79/259 (30.50%), Postives = 127/259 (49.03%), Query Frame = 1
Query: 1 QDFFYEPIAGLS-RSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSISSGILASGAVDVLVQGGGGVKRPQGPLDGVMLGVTGAVKDPLLGLRSGGFSGMVTGLVTGSIGLVLRPTYGTMMSTSQLCQVLSAYLDPRLDNDQKLRMLRNRPPRFFRSRQQVLSAYSREENIGEELLSRVRMGRYRSDGYLWHTTIK-EGMIVLVTGRRVMMVHGKVDGRANPSSAAARHSYGLVEWEV---DFGLVVCLETDEQE 762
QDF EP GL+ RSP F F GV +G+ SLVR S+Y+V D RI+++ S G+ + + + G + G++ GV+G V P+ G G++ G ++T+ L +DP + K ++R RPPR R + L YS E++GEE++ ++R GRYR+DGYL H +K LVT +RV+ ++ K +A + + V+WE+ + +V C T ++
Sbjct: 1235 QDFISEPAHGLTQRSPQAFAF--GVGRGSLSLVRASVYTVLDFNTRILTAFSLGLSEA---CLKLDDYTGYPATRHIFQGLVQGVSGVVVAPIHSFEVNGMRGVLXXXXXXXXXXXXXXXLGFSLATATTAATLRDAVDP----NTKALLVRARPPRHISLRTRRLKVYSYVESLGEEIVGKIRGGRYRADGYLGHVDLKLSHQCFLVTRKRVLFLNVK-------GAAVTQTTKYDVQWELLAEEVVMVDCSRTPSEQ 1477 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10218.186.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10218.186.1 >prot_F-distichus_contig10218.186.1 ID=prot_F-distichus_contig10218.186.1|Name=mRNA_F-distichus_contig10218.186.1|organism=Fucus distichus monoicous|type=polypeptide|length=354bp QDFFYEPIAGLSRSPFGFGFVFGVFKGTSSLVRRSLYSVTDTTDRIVSSIback to top mRNA from alignment at F-distichus_contig10218:7162..10973- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10218.186.1 ID=mRNA_F-distichus_contig10218.186.1|Name=mRNA_F-distichus_contig10218.186.1|organism=Fucus distichus monoicous|type=mRNA|length=3812bp|location=Sequence derived from alignment at F-distichus_contig10218:7162..10973- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10218:7162..10973- >mRNA_F-distichus_contig10218.186.1 ID=mRNA_F-distichus_contig10218.186.1|Name=mRNA_F-distichus_contig10218.186.1|organism=Fucus distichus monoicous|type=CDS|length=2124bp|location=Sequence derived from alignment at F-distichus_contig10218:7162..10973- (Fucus distichus monoicous)back to top |