mRNA_F-distichus_contig10215.184.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10215.184.1 vs. uniprot
Match: D7FYS8_ECTSI (RNA binding motif and ELMO/CED-12 domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS8_ECTSI) HSP 1 Score: 268 bits (686), Expect = 1.340e-84 Identity = 127/189 (67.20%), Postives = 152/189 (80.42%), Query Frame = 1
Query: 1 KVHYTPGDVMHRRLIQTIYRRMTRDERASPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRNSAADVTGWPFLCVGIGFTKEAVRALRRGACNSECNRRGSVMEVVHELHQAQFHAFLFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAYRSWSYMSSERDRKAANVVQAT 567
++ Y P DV+HRRLIQTIYRRMT ++RA PDVGPHW+T+GFQG DP TDLNRSMG+F+L QVL+LLE Q FA VL+R S ADVTGWPF+CV IGFTKEA+R LRRG C +ECNRRGSV++VVHELHQAQFHAFL LCR +PATHHA+HLA VR + D L+KAYR+ Y+ E+ R A ++V T
Sbjct: 327 QIKYAPADVVHRRLIQTIYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHLLESQLGFAMVLYRLSLADVTGWPFMCVSIGFTKEALRVLRRGGCYAECNRRGSVLDVVHELHQAQFHAFLELCRTEPATHHALHLAKVRARVETDSHVLVKAYRT--YLLEEKARSAVSIVDKT 513
BLAST of mRNA_F-distichus_contig10215.184.1 vs. uniprot
Match: A0A836CIH2_9STRA (ELMO/CED-12 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH2_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.260e-52 Identity = 92/172 (53.49%), Postives = 118/172 (68.60%), Query Frame = 1
Query: 1 KVHYTPGDVMHRRLIQTIYRRMTRDERA--SPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRNSAADVTGWPFLCVGIGFTKEAVRALRRGACNSECNRR--GSVMEVVHELHQAQFHAFLFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAY 504
+V Y P HRR++QT+YR +T A +P+ G HW+ IGFQG DP TDLNRS G+ SL+QV+ LLE +PE AA L R+SA V GWP +CV IGFTKEAV ALRRGA NR G ++E++ +HQAQFH F+ C ++P+ HHAVHL VR ++ K P LLKA+
Sbjct: 390 QVMYNPASFSHRRMLQTVYRGLTGSSAAVCAPETGSHWDAIGFQGLDPCTDLNRSQGILSLLQVMALLEARPEVAAQLMRDSA--VHGWPLMCVSIGFTKEAVAALRRGAIYGAANRHDSGDLLEILSHVHQAQFHDFMRRCHQEPSVHHAVHLCAVRAAMEKSPEKLLKAF 559
BLAST of mRNA_F-distichus_contig10215.184.1 vs. uniprot
Match: A0A7S1TTY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTY8_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.500e-32 Identity = 73/169 (43.20%), Postives = 94/169 (55.62%), Query Frame = 1
Query: 1 KVHYTPGDVMHRRLIQTIYRRMTRDERASPD-VGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRNSAADVTGWPFLCVGIGFTKEAVRALRRGACNSECNRRGSVMEVVHELHQAQFHAFLFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAY 504
KV Y P H ++ IY +T A P VG HWE +GFQG DPRTDLNRS+G+ S++Q L +E + A + R + T WPFL V I FTK A+ ALR GA +ECNRR VMEV+H+ HQA FH + ++P T HL + S+L Y
Sbjct: 353 KVKYDPATETHSGALRAIYFHLTGV--ACPAIVGSHWEAVGFQGADPRTDLNRSLGMLSVLQALAFVEKRTAVAQRIFRLTKR--TYWPFLLVSINFTKHALDALRDGALYAECNRRAKVMEVLHDAHQAIFHRYYLKLTREPGTDGITHLNATYAECAQGVPSMLAEY 517
BLAST of mRNA_F-distichus_contig10215.184.1 vs. uniprot
Match: A0A7S1XMI1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMI1_9STRA) HSP 1 Score: 122 bits (306), Expect = 3.760e-32 Identity = 65/142 (45.77%), Postives = 83/142 (58.45%), Query Frame = 1
Query: 82 ASPD-VGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRNSAADVTGWPFLCVGIGFTKEAVRALRRGACNSECNRRGSVMEVVHELHQAQFHAFLFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAY 504
ASP V HWE +GFQG DPRTDLNRS+G+ S++Q L +E + A + R + T WPFL V I FTK A+ ALR GA +ECNRR VMEV+H+ HQA FH + ++P T HL + S+L Y
Sbjct: 3 ASPAIVASHWEAVGFQGADPRTDLNRSLGMLSVLQALAFVEKRTAVAQRIFRLTKR--TYWPFLLVSINFTKHALDALRDGALYAECNRRAKVMEVLHDAHQAIFHRYYLKLTREPGTDGITHLNATYAECAQGVPSMLAEY 142
BLAST of mRNA_F-distichus_contig10215.184.1 vs. uniprot
Match: A0A7S2W6W8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6W8_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.570e-27 Identity = 69/181 (38.12%), Postives = 98/181 (54.14%), Query Frame = 1
Query: 4 VHYTPGDVMHRRLIQTIYRRMTRDERAS--------PDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRN-SAADVTGW-PFLCVGIGFTKEAVRALRRGACNSECNRRGSVMEVVHELHQAQFHAFLFLCRKKPATHHAVHLATVRTSIGK-DPGSLLKAYRSW 513
V Y P D +H R++QT++ R+ +S P G HWE IGFQGHDPRTD+NRSM +++QVL+ E P AA L R D G F+C+ IGFT++A++ALRRG C ++ +++VVH+ H AQ +P H +R S+ K P +LK + W
Sbjct: 348 VAYDPADDVHLRMLQTVFHRLMGHNVSSTGRPIDPCPVCGAHWEQIGFQGHDPRTDVNRSMKCLAVLQVLHWAETFPITAARLCRRCKEVDQFGANTFMCLSIGFTRDALQALRRGQSYYRCVQQRKILDVVHQCHHAQCVELFKRLSAQPEVPIWEHSNALRLSMEKAGPEKVLKGFDEW 528
BLAST of mRNA_F-distichus_contig10215.184.1 vs. uniprot
Match: A0A7J6N6L2_PEROL (Carboxypeptidase n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6N6L2_PEROL) HSP 1 Score: 117 bits (292), Expect = 6.110e-27 Identity = 63/173 (36.42%), Postives = 90/173 (52.02%), Query Frame = 1
Query: 1 KVHYTPGDV-MHRRLIQTIYRRMTRDERASPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRNSAADVTGWPFLCVGIGFTKEAVRALRRGACNSECNRRGSVMEVVHELHQAQF--HAFLFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAYRS 510
+ HY P D MHRR+IQT++R++T +G HW IGFQG +P TDLNR GV +L+ +LYL + P + ++ S +PF C I +TK A+ R GA + CN G+VM+VV + A F H L++ + V + PG LLK + S
Sbjct: 653 RAHYNPSDFEMHRRVIQTLWRKLTGSHYDCEALGEHWTVIGFQGTNPATDLNRFGGVLNLIHMLYLCDTAPMLSLAMYEASLRAGADFPFACASIKYTKLAMDIFRSGALSRRCNEEGTVMKVVAHFYAACFWLHCRLWVSHGRTIVDFDRTFKEVEKAATTAPGKLLKEFDS 825
BLAST of mRNA_F-distichus_contig10215.184.1 vs. uniprot
Match: A0A8J2SH64_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH64_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.250e-26 Identity = 58/134 (43.28%), Postives = 78/134 (58.21%), Query Frame = 1
Query: 10 YTPGDVMHRRLIQTIYRRMTRDERA--SPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRNSAADVTGWPFLCVGIGFTKEAVRALRRGACNSECNRRGSVMEVVHELHQAQFHAFL 405
Y P +H R+I T++R +T + P +G HW IGFQG+DPRTD+NR+M +L+Q+L+LLE + A L R + WPF C I FT+ AV+ LR G N CN G V+ +HE H A F FL
Sbjct: 437 YDPRVPVHWRMIHTVFRELTPKNKPVPCPTLGAHWVRIGFQGNDPRTDVNRAMRCLALLQLLHLLEKERRLAGALFRAANQGGKDWPFACTSISFTRMAVQKLRSGKLNGSCNALG-VLPALHECHAALFRDFL 569
BLAST of mRNA_F-distichus_contig10215.184.1 vs. uniprot
Match: A0A7J6MHV6_PEROL (ELMO CED-12 domain containing n=4 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6MHV6_PEROL) HSP 1 Score: 114 bits (284), Expect = 7.000e-26 Identity = 62/173 (35.84%), Postives = 89/173 (51.45%), Query Frame = 1
Query: 1 KVHYTPGDV-MHRRLIQTIYRRMTRDERASPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRNSAADVTGWPFLCVGIGFTKEAVRALRRGACNSECNRRGSVMEVVHELHQAQF--HAFLFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAYRS 510
+ HY P D MHRR+IQT++RR+T +G HW IGFQG +P TDLNR GV +L+ +LYL + P + ++ S +PF C I +TK A+ R GA + CN G+VM+V+ + A F H L++ + V + P LLK + S
Sbjct: 774 RAHYNPSDFEMHRRVIQTLWRRLTGSHYDCEALGEHWTVIGFQGTNPATDLNRFGGVLNLIHMLYLCDTAPMLSLAMYEASLRAGADFPFACASIKYTKLAMDIFRSGALSRRCNEEGTVMKVLAHFYAACFWLHCRLWVSHGRTIVDFDRTFKEVGKAATTAPAKLLKEFDS 946
BLAST of mRNA_F-distichus_contig10215.184.1 vs. uniprot
Match: A0A7J6MY40_PEROL (Citrate synthase n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6MY40_PEROL) HSP 1 Score: 114 bits (284), Expect = 7.350e-26 Identity = 62/173 (35.84%), Postives = 89/173 (51.45%), Query Frame = 1
Query: 1 KVHYTPGDV-MHRRLIQTIYRRMTRDERASPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRNSAADVTGWPFLCVGIGFTKEAVRALRRGACNSECNRRGSVMEVVHELHQAQF--HAFLFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAYRS 510
+ HY P D MHRR+IQT++RR+T +G HW IGFQG +P TDLNR GV +L+ +LYL + P + ++ S +PF C I +TK A+ R GA + CN G+VM+V+ + A F H L++ + V + P LLK + S
Sbjct: 1269 RAHYNPSDFEMHRRVIQTLWRRLTGSHYDCEALGEHWTVIGFQGTNPATDLNRFGGVLNLIHMLYLCDTAPMLSLAMYEASLRAGADFPFACASIKYTKLAMDIFRSGALSRRCNEEGTVMKVLAHFYAACFWLHCRLWVSHGRTIVDFDRTFKEVGKAATTAPAKLLKEFDS 1441
BLAST of mRNA_F-distichus_contig10215.184.1 vs. uniprot
Match: A0A7J6MY96_PEROL (Citrate synthase n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6MY96_PEROL) HSP 1 Score: 114 bits (284), Expect = 7.480e-26 Identity = 62/173 (35.84%), Postives = 89/173 (51.45%), Query Frame = 1
Query: 1 KVHYTPGDV-MHRRLIQTIYRRMTRDERASPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRNSAADVTGWPFLCVGIGFTKEAVRALRRGACNSECNRRGSVMEVVHELHQAQF--HAFLFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAYRS 510
+ HY P D MHRR+IQT++RR+T +G HW IGFQG +P TDLNR GV +L+ +LYL + P + ++ S +PF C I +TK A+ R GA + CN G+VM+V+ + A F H L++ + V + P LLK + S
Sbjct: 1269 RAHYNPSDFEMHRRVIQTLWRRLTGSHYDCEALGEHWTVIGFQGTNPATDLNRFGGVLNLIHMLYLCDTAPMLSLAMYEASLRAGADFPFACASIKYTKLAMDIFRSGALSRRCNEEGTVMKVLAHFYAACFWLHCRLWVSHGRTIVDFDRTFKEVGKAATTAPAKLLKEFDS 1441 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10215.184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10215.184.1 >prot_F-distichus_contig10215.184.1 ID=prot_F-distichus_contig10215.184.1|Name=mRNA_F-distichus_contig10215.184.1|organism=Fucus distichus monoicous|type=polypeptide|length=180bp MHRRLIQTIYRRMTRDERASPDVGPHWETIGFQGHDPRTDLNRSMGVFSLback to top mRNA from alignment at F-distichus_contig10215:9508..10845- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10215.184.1 ID=mRNA_F-distichus_contig10215.184.1|Name=mRNA_F-distichus_contig10215.184.1|organism=Fucus distichus monoicous|type=mRNA|length=1338bp|location=Sequence derived from alignment at F-distichus_contig10215:9508..10845- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10215:9508..10845- >mRNA_F-distichus_contig10215.184.1 ID=mRNA_F-distichus_contig10215.184.1|Name=mRNA_F-distichus_contig10215.184.1|organism=Fucus distichus monoicous|type=CDS|length=1080bp|location=Sequence derived from alignment at F-distichus_contig10215:9508..10845- (Fucus distichus monoicous)back to top |