mRNA_F-distichus_contig102059.169.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig102059.169.1
Unique NamemRNA_F-distichus_contig102059.169.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
[Close]
BLAST of mRNA_F-distichus_contig102059.169.1 vs. uniprot
Match: A0A0K2V9Z4_LEPSM (SH3 domain-containing protein n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2V9Z4_LEPSM)

HSP 1 Score: 338 bits (868), Expect = 1.100e-111
Identity = 172/222 (77.48%), Postives = 197/222 (88.74%), Query Frame = 1 
Query:    1 TTVGASTLVEGKAKKKGLLGNKVETVPPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFDHLKRRFEGRIIITNVSADISLAKKNALNNPSRQAL-KRSNSRGSNLVENQNEIERIF*LSKSLQLVFPDCDIINHPSQLLKTSLNPILVYLQISSPKVLQRLIKSPGKYQTKNMNVQMVAAEKLAQCPLEMWDIILHENSIEDASDHLCVWLEEYWAATHPP 663
            T  G S+LVE + KKKGLLG K E +PPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFD LKRRFE RIIIT V++DISLAKKN LNNPS++AL ++SN+R S++ E Q+E+ERIF L+K+LQLV  DCD INHPSQLLKTSLNPILVYLQISSPKVLQRL+KS GK QT+NMNVQ+VA+EKLA CPL+MWDI+LHENS+E+AS+HL  WLEEYWAATHPP
Sbjct:  198 TPTGVSSLVEQERKKKGLLGKKQEQIPPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFDFLKRRFESRIIITRVTSDISLAKKNVLNNPSKRALIEKSNTRSSSMAEVQSEVERIFELAKTLQLVVLDCDTINHPSQLLKTSLNPILVYLQISSPKVLQRLVKSRGKSQTRNMNVQLVASEKLALCPLDMWDILLHENSLEEASEHLSSWLEEYWAATHPP 419
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BLAST of mRNA_F-distichus_contig102059.169.1 vs. uniprot
Match: A0A553P3U9_TIGCA (GuKc domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P3U9_TIGCA)

HSP 1 Score: 345 bits (884), Expect = 7.520e-111
Identity = 177/225 (78.67%), Postives = 200/225 (88.89%), Query Frame = 1 
Query:    1 TTVGASTLVEGKAKKKGLLGNK-VETVPPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFDHLKRRFEGRIIITNVSADISLAKKNALNNPSRQAL-KRSNSRGSNLVENQNEIERIF*LSKSLQLVFPDCDIINHPSQLLKTSLNPILVYLQISSPKVLQRLIKSPGKYQTKNMNVQMVAAEKLAQCPLEMWDIILHENSIEDASDHLCVWLEEYWAATHPPHR 669
            T +  ++L+E + KKKGLLGNK +E +PPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFDHL+RRFE RIIIT V+ADISLAKKN +NNPS++AL +RSNSR SN+ E QNEIERIF L+K+LQLV  DCD INHPSQLLKTSLNPILVYLQISSPKVLQRLIKS GK QT+NMNVQ+V+AEKLAQCP E WD++LHENS+E+ASDHL  WLEEYWAATHPP R
Sbjct:  197 TPIPGASLIEQERKKKGLLGNKKMEQIPPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFDHLRRRFENRIIITRVAADISLAKKNVMNNPSKRALIERSNSRSSNMAEVQNEIERIFELAKTLQLVVLDCDTINHPSQLLKTSLNPILVYLQISSPKVLQRLIKSRGKSQTRNMNVQLVSAEKLAQCPHEYWDVVLHENSLEEASDHLVGWLEEYWAATHPPAR 421
[Close]
BLAST of mRNA_F-distichus_contig102059.169.1 vs. uniprot
Match: A0A7R8CP01_LEPSM (CACNB2 n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A7R8CP01_LEPSM)

HSP 1 Score: 323 bits (828), Expect = 1.820e-105
Identity = 163/206 (79.13%), Postives = 186/206 (90.29%), Query Frame = 1 
Query:   49 GLLGNKVETVPPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFDHLKRRFEGRIIITNVSADISLAKKNALNNPSRQAL-KRSNSRGSNLVENQNEIERIF*LSKSLQLVFPDCDIINHPSQLLKTSLNPILVYLQISSPKVLQRLIKSPGKYQTKNMNVQMVAAEKLAQCPLEMWDIILHENSIEDASDHLCVWLEEYWAATHPP 663
            GLLG K E +PPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFD LKRRFE RIIIT V++DISLAKKN LNNPS++AL ++SN+R S++ E Q+E+ERIF L+K+LQLV  DCD INHPSQLLKTSLNPILVYLQISSPKVLQRL+KS GK QT+NMNVQ+VA+EKLA CPL+MWDI+LHENS+E+AS+HL  WLEEYWAATHPP
Sbjct:  261 GLLGKKQEQIPPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFDFLKRRFESRIIITRVTSDISLAKKNVLNNPSKRALIEKSNTRSSSMAEVQSEVERIFELAKTLQLVVLDCDTINHPSQLLKTSLNPILVYLQISSPKVLQRLVKSRGKSQTRNMNVQLVASEKLALCPLDMWDILLHENSLEEASEHLSSWLEEYWAATHPP 466
[Close]
BLAST of mRNA_F-distichus_contig102059.169.1 vs. uniprot
Match: UPI000C7603E1 (voltage-dependent L-type calcium channel subunit beta-4-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7603E1)

HSP 1 Score: 291 bits (744), Expect = 7.000e-97
Identity = 157/194 (80.93%), Postives = 171/194 (88.14%), Query Frame = 1 
Query:  193 RFEGRIIITNVSADISLAKKNALNNPSRQAL-KRSNSRGSNLVENQNEIERIF*LSKSLQLVFPDCDIINHPSQLLKTSLNPILVYLQISSPKVLQRLIKSPGKYQTKNMNVQMVAAEKLAQCPLEMWDIILHENSIEDASDHLCVWLEEYWAATHPPHREETPGT-TNTQQQSRMPTEEDTEYARMRERYEEE 768
            RFEGRIIIT VSADISLAKKNALNNPS++AL +R+NSRGSNL E QNEIERIF LSKSLQLV  DCD INHPSQLLKTSLNPILVYLQISSPKVLQRLIKS GK QTKNMNVQ+VAAEKLAQCPLEMWDIILHENS+E+ASDHLC WLEEYW ATHPP+R+    T TNT+   +  T+ED+EY RMR+RYEEE
Sbjct:    7 RFEGRIIITRVSADISLAKKNALNNPSKRALIERTNSRGSNLAEVQNEIERIFELSKSLQLVVLDCDTINHPSQLLKTSLNPILVYLQISSPKVLQRLIKSRGKAQTKNMNVQLVAAEKLAQCPLEMWDIILHENSLEEASDHLCSWLEEYWTATHPPNRQNVDNTVTNTRMYRQRATDEDSEYIRMRDRYEEE 200
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BLAST of mRNA_F-distichus_contig102059.169.1 vs. uniprot
Match: A0A8J4XY94_CHIOP (Voltage-dependent L-type calcium channel subunit beta-2 n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4XY94_CHIOP)

HSP 1 Score: 288 bits (738), Expect = 4.540e-94
Identity = 151/220 (68.64%), Postives = 182/220 (82.73%), Query Frame = 1 
Query:   10 GASTLVEGKAK-KKGLLGNKVETVPPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFDHLKRRFEGRIIITNVSADISLAKKNALNNPSRQAL-KRSNSRGSNLVENQNEIERIF*LSKSLQLVFPDCDIINHPSQLLKTSLNPILVYLQISSPKVLQRLIKSPGKYQTKNMNVQMVAAEKLAQCPLEMWDIILHENSIEDASDHLCVWLEEYWAATHPP 663
            G +++    AK KK     K E +PPYDVVPSMRP+V++GPSLKGYEVTDMMQKALFD++K +FEGR+IIT VSADISLAK++ LNNP+++AL +RSNSR S + E Q EIERIF L+++LQLV  DCD INHPSQL KTSL PILVYL+ISSPKVLQRLIKS GK Q++N+NVQMVAAEKLAQCP EM+D+IL EN +EDA +H+  +LE YW ATHPP
Sbjct:   49 GKTSITTPPAKGKKNPFFKKQENIPPYDVVPSMRPLVLVGPSLKGYEVTDMMQKALFDYVKHKFEGRVIITRVSADISLAKRSLLNNPTKRALMERSNSRSSCIAEVQAEIERIFELARTLQLVVLDCDTINHPSQLAKTSLAPILVYLKISSPKVLQRLIKSRGKSQSRNLNVQMVAAEKLAQCPPEMFDVILDENQLEDACEHIAEYLEAYWQATHPP 268
[Close]
BLAST of mRNA_F-distichus_contig102059.169.1 vs. uniprot
Match: E9GN64_DAPPU (SH3 domain-containing protein (Fragment) n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9GN64_DAPPU)

HSP 1 Score: 292 bits (747), Expect = 7.680e-94
Identity = 151/212 (71.23%), Postives = 179/212 (84.43%), Query Frame = 1 
Query:   31 GKAKKKGLLGNKVETVPPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFDHLKRRFEGRIIITNVSADISLAKKNALNNPSRQAL-KRSNSRGSNLVENQNEIERIF*LSKSLQLVFPDCDIINHPSQLLKTSLNPILVYLQISSPKVLQRLIKSPGKYQTKNMNVQMVAAEKLAQCPLEMWDIILHENSIEDASDHLCVWLEEYWAATHPP 663
            G  +K+     K E++PPYDVVPSMRPVV++GPSLKGYEVTDMMQKALFD+LK RFEGRIIIT VSADISLAK++ LNNPS++AL +RSNSR + + E Q EIERIF L+++LQLV  DCD INHPSQL KTSL P++VYL+ISSPKVLQRLIKS GK Q++N+NVQMVAAEKLAQCP EM+DIIL EN +EDA +H+  +LE YW ATHPP
Sbjct:  183 GSKEKRKPFFKKTESIPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDYLKHRFEGRIIITRVSADISLAKRSLLNNPSKRALMERSNSRSNCIAEVQAEIERIFELARTLQLVVLDCDTINHPSQLAKTSLAPLIVYLKISSPKVLQRLIKSRGKSQSRNLNVQMVAAEKLAQCPPEMFDIILDENQLEDACEHIADYLEAYWRATHPP 394
[Close]
BLAST of mRNA_F-distichus_contig102059.169.1 vs. uniprot
Match: A0A8J5JMJ1_HOMAM (Voltage-dependent L-type calcium channel subunit beta-2-like 2 n=1 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5JMJ1_HOMAM)

HSP 1 Score: 288 bits (736), Expect = 1.570e-93
Identity = 150/216 (69.44%), Postives = 179/216 (82.87%), Query Frame = 1 
Query:   19 TLVEGKAKKKGLLGNKVETVPPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFDHLKRRFEGRIIITNVSADISLAKKNALNNPSRQAL-KRSNSRGSNLVENQNEIERIF*LSKSLQLVFPDCDIINHPSQLLKTSLNPILVYLQISSPKVLQRLIKSPGKYQTKNMNVQMVAAEKLAQCPLEMWDIILHENSIEDASDHLCVWLEEYWAATHPP 663
            T    K K+K     K E +PPYDVVPSMRP+V++GPSLKGYEVTDMMQKALFD++K RFEG++IIT VSADISLAK++ LNNPS++AL +RSNSR S + E Q EIERIF L+++LQLV  DCD INHPSQL KTSL PILVYL+ISSPKVLQRLIKS GK Q++N+NVQMVAAEKLAQCP EM+D+IL EN +EDA +H+  +L+ YW ATHPP
Sbjct:   53 TTPPAKEKRKPFF-KKQENIPPYDVVPSMRPLVLVGPSLKGYEVTDMMQKALFDYVKHRFEGKVIITRVSADISLAKRSLLNNPSKRALMERSNSRSSCIAEVQAEIERIFELARTLQLVVLDCDTINHPSQLAKTSLAPILVYLKISSPKVLQRLIKSRGKSQSRNLNVQMVAAEKLAQCPPEMFDVILDENQLEDACEHIAEYLDAYWQATHPP 267
[Close]
BLAST of mRNA_F-distichus_contig102059.169.1 vs. uniprot
Match: J7G6V9_SCYPA (Voltage-gated calcium channel beta subunit transcript variant 3 n=2 Tax=Decapoda TaxID=6683 RepID=J7G6V9_SCYPA)

HSP 1 Score: 290 bits (742), Expect = 4.610e-93
Identity = 152/220 (69.09%), Postives = 182/220 (82.73%), Query Frame = 1 
Query:   10 GASTLVEGKAK-KKGLLGNKVETVPPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFDHLKRRFEGRIIITNVSADISLAKKNALNNPSRQAL-KRSNSRGSNLVENQNEIERIF*LSKSLQLVFPDCDIINHPSQLLKTSLNPILVYLQISSPKVLQRLIKSPGKYQTKNMNVQMVAAEKLAQCPLEMWDIILHENSIEDASDHLCVWLEEYWAATHPP 663
            G +++    AK KK     K E +PPYDVVPSMRP+V++GPSLKGYEVTDMMQKALFD++K +FEGR+IIT VSADISLAK++ LNNPS++AL +RSNSR S + E Q EIERIF L+++LQLV  DCD INHPSQL KTSL PILVYL+ISSPKVLQRLIKS GK Q++N+NVQMVAAEKLAQCP EM+D+IL EN +EDA +H+  +LE YW ATHPP
Sbjct:  170 GKTSITTPPAKGKKNPFFKKQENIPPYDVVPSMRPLVLVGPSLKGYEVTDMMQKALFDYIKHKFEGRVIITRVSADISLAKRSLLNNPSKRALMERSNSRSSCIAEVQAEIERIFELARTLQLVVLDCDTINHPSQLAKTSLAPILVYLKISSPKVLQRLIKSRGKSQSRNLNVQMVAAEKLAQCPPEMFDVILDENQLEDACEHIAEYLEAYWQATHPP 389
[Close]
BLAST of mRNA_F-distichus_contig102059.169.1 vs. uniprot
Match: A0A8N7W061_SPOFR (voltage-dependent L-type calcium channel subunit beta-2-like isoform X13 n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A8N7W061_SPOFR)

HSP 1 Score: 290 bits (742), Expect = 4.890e-93
Identity = 155/217 (71.43%), Postives = 179/217 (82.49%), Query Frame = 1 
Query:   31 GKAKKKGLLGNKVETVPPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFDHLKRRFEGRIIITNVSADISLAKKNALNNPSRQAL-KRSNSRGSNLVENQNEIERIF*LSKSLQLVFPDCDIINHPSQLLKTSLNPILVYLQISSPKVLQRLIKSPGKYQTKNMNVQMVAAEKLAQCPLEMWDIILHENSIEDASDHLCVWLEEYWAATHPPHREET 678
            GK K+K     K ET  PYDVVPSMRPVVI+GPSLKGYEVTDMMQKALFD LKRRFEGRIIIT V ADISLAK++ LNNPS++A+ +RSNSR + L E Q EIERIF L+++LQLV  DCD INHPSQL KTSL P +VYL+ISSPKVLQRLIKS GK QTKN++VQMVAAEKLAQCP +M+D+IL EN +EDA +H+  +LE YW ATHPP  E+T
Sbjct:  182 GKEKRKPFF-KKAETSTPYDVVPSMRPVVIVGPSLKGYEVTDMMQKALFDFLKRRFEGRIIITRVMADISLAKRSLLNNPSKRAIMERSNSRSTCLAEVQAEIERIFELARTLQLVVLDCDTINHPSQLAKTSLAPTIVYLKISSPKVLQRLIKSRGKGQTKNLSVQMVAAEKLAQCPPDMFDVILDENQLEDACEHIAEYLEAYWRATHPPVHEDT 397
[Close]
BLAST of mRNA_F-distichus_contig102059.169.1 vs. uniprot
Match: J7G4Q5_SCYPA (Voltage-gated calcium channel beta subunit transcript variant 1 n=2 Tax=Scylla paramamosain TaxID=85552 RepID=J7G4Q5_SCYPA)

HSP 1 Score: 290 bits (742), Expect = 9.760e-93
Identity = 152/220 (69.09%), Postives = 182/220 (82.73%), Query Frame = 1 
Query:   10 GASTLVEGKAK-KKGLLGNKVETVPPYDVVPSMRPVVIIGPSLKGYEVTDMMQKALFDHLKRRFEGRIIITNVSADISLAKKNALNNPSRQAL-KRSNSRGSNLVENQNEIERIF*LSKSLQLVFPDCDIINHPSQLLKTSLNPILVYLQISSPKVLQRLIKSPGKYQTKNMNVQMVAAEKLAQCPLEMWDIILHENSIEDASDHLCVWLEEYWAATHPP 663
            G +++    AK KK     K E +PPYDVVPSMRP+V++GPSLKGYEVTDMMQKALFD++K +FEGR+IIT VSADISLAK++ LNNPS++AL +RSNSR S + E Q EIERIF L+++LQLV  DCD INHPSQL KTSL PILVYL+ISSPKVLQRLIKS GK Q++N+NVQMVAAEKLAQCP EM+D+IL EN +EDA +H+  +LE YW ATHPP
Sbjct:  196 GKTSITTPPAKGKKNPFFKKQENIPPYDVVPSMRPLVLVGPSLKGYEVTDMMQKALFDYIKHKFEGRVIITRVSADISLAKRSLLNNPSKRALMERSNSRSSCIAEVQAEIERIFELARTLQLVVLDCDTINHPSQLAKTSLAPILVYLKISSPKVLQRLIKSRGKSQSRNLNVQMVAAEKLAQCPPEMFDVILDENQLEDACEHIAEYLEAYWQATHPP 415
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102059.169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0K2V9Z4_LEPSM1.100e-11177.48SH3 domain-containing protein n=1 Tax=Lepeophtheir... [more]
A0A553P3U9_TIGCA7.520e-11178.67GuKc domain-containing protein n=1 Tax=Tigriopus c... [more]
A0A7R8CP01_LEPSM1.820e-10579.13CACNB2 n=1 Tax=Lepeophtheirus salmonis TaxID=72036... [more]
UPI000C7603E17.000e-9780.93voltage-dependent L-type calcium channel subunit b... [more]
A0A8J4XY94_CHIOP4.540e-9468.64Voltage-dependent L-type calcium channel subunit b... [more]
E9GN64_DAPPU7.680e-9471.23SH3 domain-containing protein (Fragment) n=1 Tax=D... [more]
A0A8J5JMJ1_HOMAM1.570e-9369.44Voltage-dependent L-type calcium channel subunit b... [more]
J7G6V9_SCYPA4.610e-9369.09Voltage-gated calcium channel beta subunit transcr... [more]
A0A8N7W061_SPOFR4.890e-9371.43voltage-dependent L-type calcium channel subunit b... [more]
J7G4Q5_SCYPA9.760e-9369.09Voltage-gated calcium channel beta subunit transcr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig102059contigF-distichus_contig102059:160..1703 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score122.9
Seed ortholog evalue7.2e-26
Seed eggNOG ortholog6669.EFX79088
Preferred nameCa-beta
KEGG koko:K04863
KEGG TC8.A.22.1.2
KEGG Pathwayko04010,ko04260,ko04261,ko04921,ko05410,ko05412,ko05414,map04010,map04260,map04261,map04921,map05410,map05412,map05414
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005216,GO:0005244,GO:0005245,GO:0005261,GO:0005262,GO:0005575,GO:0005623,GO:0005886,GO:0005891,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0007154,GO:0007165,GO:0007267,GO:0007268,GO:0007275,GO:0007399,GO:0007528,GO:0008150,GO:0008324,GO:0008331,GO:0009987,GO:0010959,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0016322,GO:0019722,GO:0019932,GO:0021700,GO:0022008,GO:0022803,GO:0022832,GO:0022836,GO:0022838,GO:0022839,GO:0022843,GO:0022857,GO:0022890,GO:0022898,GO:0023052,GO:0030001,GO:0030154,GO:0030182,GO:0031224,GO:0032409,GO:0032412,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0034220,GO:0034702,GO:0034703,GO:0034704,GO:0034762,GO:0034765,GO:0035556,GO:0042551,GO:0043269,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0048468,GO:0048469,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051049,GO:0051179,GO:0051234,GO:0051716,GO:0051924,GO:0055085,GO:0065007,GO:0065009,GO:0070588,GO:0070838,GO:0071695,GO:0071840,GO:0071944,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0098916,GO:0099536,GO:0099537,GO:1901019,GO:1901385,GO:1902495,GO:1903169,GO:1904062,GO:1990351,GO:2001257
EggNOG free text desc.voltage-gated calcium channel activity. It is involved in the biological process described with calcium ion transmembrane transport
EggNOG OGs38D0P@33154,3BC85@33208,3CXPJ@33213,41V5M@6656,KOG3812@1,KOG3812@2759
COG Functional cat.PT
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Exons4
Model size768
Cds size249
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig102059.169.1prot_F-distichus_contig102059.169.1Fucus distichus monoicouspolypeptideF-distichus_contig102059 736..1601 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928934.6953387-UTR-F-distichus_contig102059:159..2141622928934.6953387-UTR-F-distichus_contig102059:159..214Fucus distichus monoicousUTRF-distichus_contig102059 160..214 -
1690885073.564-UTR-F-distichus_contig102059:159..2141690885073.564-UTR-F-distichus_contig102059:159..214Fucus distichus monoicousUTRF-distichus_contig102059 160..214 -
1622928934.7098358-UTR-F-distichus_contig102059:325..5851622928934.7098358-UTR-F-distichus_contig102059:325..585Fucus distichus monoicousUTRF-distichus_contig102059 326..585 -
1690885073.5774548-UTR-F-distichus_contig102059:325..5851690885073.5774548-UTR-F-distichus_contig102059:325..585Fucus distichus monoicousUTRF-distichus_contig102059 326..585 -
1622928934.7197034-UTR-F-distichus_contig102059:633..7351622928934.7197034-UTR-F-distichus_contig102059:633..735Fucus distichus monoicousUTRF-distichus_contig102059 634..735 -
1690885073.5870497-UTR-F-distichus_contig102059:633..7351690885073.5870497-UTR-F-distichus_contig102059:633..735Fucus distichus monoicousUTRF-distichus_contig102059 634..735 -
1622928934.7515912-UTR-F-distichus_contig102059:1601..17031622928934.7515912-UTR-F-distichus_contig102059:1601..1703Fucus distichus monoicousUTRF-distichus_contig102059 1602..1703 -
1690885073.6298885-UTR-F-distichus_contig102059:1601..17031690885073.6298885-UTR-F-distichus_contig102059:1601..1703Fucus distichus monoicousUTRF-distichus_contig102059 1602..1703 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928934.7293627-CDS-F-distichus_contig102059:735..9481622928934.7293627-CDS-F-distichus_contig102059:735..948Fucus distichus monoicousCDSF-distichus_contig102059 736..948 -
1690885073.6027577-CDS-F-distichus_contig102059:735..9481690885073.6027577-CDS-F-distichus_contig102059:735..948Fucus distichus monoicousCDSF-distichus_contig102059 736..948 -
1622928934.7392986-CDS-F-distichus_contig102059:1565..16011622928934.7392986-CDS-F-distichus_contig102059:1565..1601Fucus distichus monoicousCDSF-distichus_contig102059 1566..1601 -
1690885073.61526-CDS-F-distichus_contig102059:1565..16011690885073.61526-CDS-F-distichus_contig102059:1565..1601Fucus distichus monoicousCDSF-distichus_contig102059 1566..1601 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig102059.169.1

>prot_F-distichus_contig102059.169.1 ID=prot_F-distichus_contig102059.169.1|Name=mRNA_F-distichus_contig102059.169.1|organism=Fucus distichus monoicous|type=polypeptide|length=83bp
MRPVVIIGPSLKGYEVTDMMQKALFDHLKRRFEGRIIITNVSADISLAKK
NALNNPSRQALKRSNSRGSNLVENQNEIERIF*
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mRNA from alignment at F-distichus_contig102059:160..1703-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig102059.169.1 ID=mRNA_F-distichus_contig102059.169.1|Name=mRNA_F-distichus_contig102059.169.1|organism=Fucus distichus monoicous|type=mRNA|length=1544bp|location=Sequence derived from alignment at F-distichus_contig102059:160..1703- (Fucus distichus monoicous)
ACTACTGTTGGAGCTTCCACTTTGGTGGAGGGAAAGGCTAAGAAGAAGGG
GTTGCTTGGAAATAAAGTCGAGACTGTCCCTCCATATGACGTGGTTCCGT
CCATGAGGCCTGTGGTCATAATTGGGCCATCTCTAAAGGTAATTTAGTTG
TTGGTTAATTCCATATATAGATGTAAAGTTGCGGATATTTTTAGTCCAAT
AAGGAAAAATGTTTTCTGAATTATGGAATGAGGCTGCTCAATGGGTGATC
ACATTACAATTAACTCTCAACCACTGAACAAAAGGTCAAATAAAAAATAA
AACAACCTGACACAATTACAGAAAAGGCTTCTTTTTTAATATCACAATGA
TTGCTCGATTTGGTTTTTAAGCCTATGTTTTAATGTAATTATTCAAATAT
TTACTCTCTAATTTACACGGCTGGAACTCTGTTTGGCACTTGAAACGAAA
GTTTGAATGTTCAGGCAAATAATGAACACAAATGCACTAAATGTTCCGGT
CCACAAGATGCTATTCATTTGTGTTTTGTGACTACACAAGAGATTACGGA
TTCAAAAGGATATTTCATAAAGAGTTTAGCTTGATATTAACTACAAAATC
TTTAATATTTCCAACCTTATGAACCGAAATGGCTCCCTATCCATCCAATT
CTGTGCCGAGTAATCCATTGTATTACTAAAAACACTTGTAAGTAACCGAC
TTTTGGTCAAATGTTGGACAGCAATAAAATTACTCACGTTCTTTTTTTCA
TCCAGGGTTACGAGGTTACTGATATGATGCAGAAGGCCTTGTTCGATCAC
TTGAAGAGGAGGTTCGAGGGAAGAATCATCATCACAAATGTGTCGGCAGA
CATCTCCTTAGCAAAAAAGAATGCACTGAACAATCCTTCCAGACAAGCAC
TCAAGCGCTCAAACTCAAGAGGCTCAAATTTAGTTGAAAATCAAAACGAA
ATTGAGAGGATTTTTTAGCTTTCAAAGTCCCTGCAGCTGGTTTTCCCTGA
TTGTGACATCATCAATCATCCTAGCCAACTACTCAAGACATCCCTCAATC
CAATCCTAGTCTATCTTCAGGTACATTCCCCAAATGGTGACACTAATTTG
ACCATTTCTATTTTGTAGATTTCATCTCCTAAAGTTCTCCAAAGACTCAT
AAAATCACCTGGCAAATATCAAACAAAGAACATGAACGTGCAAATGGTAG
CTGCAGAGAAGCTTGCTCAGTGCCCGCTCGAGATGTGGGACATCATCCTG
CATGAGAACAGCATTGAGGATGCCAGTGACCACTTGTGTGTGTGGCTGGA
GGAATATTGGGCAGCCACACACCCTCCTCACAGGGAAGAAACTCCTGGCA
CAACAAACACACAACAACAGTCCAGAATGTTCAGACAAAGGCAAGTGCAA
AAATAAATTTTAGCAAAACAAATCCCTGAACAATTTTCTTCAAAAAGAAC
AGAAATAATTTGAGATATTAAAACATTTATATTTTACAGGCCTACTGAAG
AAGACACAGAATACGCCAGAATGAGGGAGAGATATGAAGAGGAA
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Coding sequence (CDS) from alignment at F-distichus_contig102059:160..1703-

>mRNA_F-distichus_contig102059.169.1 ID=mRNA_F-distichus_contig102059.169.1|Name=mRNA_F-distichus_contig102059.169.1|organism=Fucus distichus monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at F-distichus_contig102059:160..1703- (Fucus distichus monoicous)
ATGAGGCCTGTGGTCATAATTGGGCCATCTCTAAAGATGAGGCCTGTGGT
CATAATTGGGCCATCTCTAAAGGGTTACGAGGTTACTGATATGATGCAGA
AGGCCTTGTTCGATCACTTGAAGAGGAGGTTCGAGGGAAGAATCATCATC
ACAAATGTGTCGGCAGACATCTCCTTAGCAAAAAAGAATGCACTGAACAA
TCCTTCCAGACAAGCACTCAAGCGCTCAAACTCAAGAGGCTCAAATTTAG
TTGAAAATCAAAACGAAATTGAGAGGATTTTTTAGGGTTACGAGGTTACT
GATATGATGCAGAAGGCCTTGTTCGATCACTTGAAGAGGAGGTTCGAGGG
AAGAATCATCATCACAAATGTGTCGGCAGACATCTCCTTAGCAAAAAAGA
ATGCACTGAACAATCCTTCCAGACAAGCACTCAAGCGCTCAAACTCAAGA
GGCTCAAATTTAGTTGAAAATCAAAACGAAATTGAGAGGATTTTTTAG
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