mRNA_F-distichus_contig102.163.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig102.163.1 vs. uniprot
Match: A0A6H5JDS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS6_9PHAE) HSP 1 Score: 597 bits (1538), Expect = 1.510e-199 Identity = 331/681 (48.60%), Postives = 439/681 (64.46%), Query Frame = 1
Query: 1 VEFQIGEDASQRAVAETQGLEETGPLPAGREDGGYDFPVYDVRVSSEGGCDSPGVFSGCHIFYIKDGDMSSDSRWSCGPTAVGDDITPDTPYDDGTVCGVVFELNIFRYVRQIQLAFHLGDEYHYEFAIQAYTKNYEWVTVVPSVISSGTTVDLETFDVSVHTDTLRIVPSFQSIGQMFSIKEMVVLENA---FVEGTVPVFHTR------DDFDVGEGITEATTGFAFDIPDVGDSYTMTFADAKLSGLRMKFPKDRTFTFDIVYRNSSFDDVSQQRFTSAGGDKTFETFNMSTPS-ID-NIEIVAVEGPTFENNSSYPTLRVVDFQILGEISKPSGTFDVHRTVEVSGGWGWIPDLFAEASADQEVIMTAICETKGATFDGTDCVGELDETAVTVSLPPGGGFFVNGPIFLKSNVTLEGKWNVEYGTWTYFYVYDGPNISSTGEDAVIVIDGTTGVSLEYICFSGWWEGVTGSIVPGTVGNICLEVRNSQDLALGKKLFFDSARTGAARFTDSSNITAFAFYVGE-YETGNFLELTRVDNFYISAPPEMTRLLIDTCTNVVFEGAYDPYEIPNPGLDPPT-GGEQTSNVVITGNSSGIVFKNMPVGPGIEPRILMETTEPLTLDDIPRYEEAETGDCIVQVPEGSTEETLIQMNSD------------DILTLSGDCWV 1968
VEF++GED R VAE L+ TGPLP GG P +D+R+ +GGCD P F GCH+FYIKD +M DSRW+CGP G D +D C + F LN FRY+RQIQ+AF+ GD H EF+I+AYT EWVTVVPS ISS D +TFDV+VHT+ +R++P F I IKE+V LE F+EGT+PVF TR DD + + T F FD+ G+ M + ++ LRM+FP DR+F F + Y D + FTSAGG KT+ETF +STP+ +D +E+VAV GPTF++ YP LRVVD Q++GE+ K G DV T + WG +PD+ E ++Q+ +M AICE KG+TFDG DCVGELD++ VT+ L G ++++GPIFLKS V ++G W EY T+ + +YDG + + TGEDA++V+DG TG L + F E TG IVPGTVGN L VRNSQD+ + F S R G A FTDS N++AF FY G+ ETGN++ELTRVD+ + A P M+ +LIDTC ++VFEG D + IP+ PP GG+QT+NVV+TG+SSGIVF+N V G EPRIL+E+TEPLTLD++ RY +AE GDCIV+VPEG+ E+ ++Q+ ++ +L SG CWV
Sbjct: 331 VEFRVGEDVPARPVAEKAWLKTTGPLPRAVNPGGSQDPSFDIRLPEDGGCDPPIHFEGCHVFYIKDENM--DSRWTCGPLVAGSDRNS---WD----CDLEFSLNYFRYIRQIQIAFYTGDGEHNEFSIEAYTAAGEWVTVVPSAISSEDGSDYQTFDVAVHTNMIRLLPKFGQITDFIGIKELVFLEKRKKDFIEGTIPVFSTRIRSTSNDDEEEDGADVDIPTRFEFDLQIEGNYIDMNVPPSTVTALRMRFPADRSFVFMVEY------DGIVEEFTSAGGPKTWETFTLSTPAEVDFGLEVVAVTGPTFDHIPDYPALRVVDLQVVGELRKEPGYIDVVTTTIET--WGVVPDVIGEGVSEQKTVMKAICEAKGSTFDGIDCVGELDDSEVTIKLQFG-DYYIDGPIFLKSGVFIDGDWKDEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRK-EDPTGDIVPGTVGNTNLAVRNSQDIRFSEMGLF-SGRNGGATFTDSRNMSAFIFYNGDGLETGNYMELTRVDDVHFRALPNMSGVLIDTCNDIVFEGV-DEFAIPSAYFSPPVAGGDQTANVVVTGDSSGIVFQNFIVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWV 990
BLAST of mRNA_F-distichus_contig102.163.1 vs. uniprot
Match: D7FSQ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ6_ECTSI) HSP 1 Score: 552 bits (1422), Expect = 2.250e-182 Identity = 311/674 (46.14%), Postives = 420/674 (62.31%), Query Frame = 1
Query: 1 VEFQIGEDASQRAVAETQGLEETGPLPAGREDGGYDFPVYDVRVSSEGGCDSPGVFSGCHIFYIKDGDMSSDSRWSCGPTAVGDDITPDTPYDDGTVCGVVFELNIFRYVRQIQLAFHLGDEYHYEFAIQAYTKNYEWVTVVPSVISSGTTVDLETFDVSVHTDTLRIVPSFQSIGQMFSIKEMVVLEN---AFVEGTVPVFHTR---------DDFDVGEGITEATTGFAFDIPDVGDSYTMTFADAKLSGLRMKFPKDRTFTFDIVYRNSSFDDVSQQRFTSAGGDKTFETFNMSTPS-IDN-IEIVAVEGPTFENNSSYPTLRVVDFQILGEISKPSGTFDVHRTVEVSGGWGWIPDLFAEASADQEVIMTAICETKGATFDGTDCVGELDETAVTVSLPPGGGFFVNGPIFLKSNVTLEG-KWNVEYGTWTYFYVYDGPNISSTGEDAVIVIDGTTGVSLEYICFSGWWEGVTGSIVPGTVGNICLEVRNSQDLALGKKLFFDSARTGAARFTDSSNITAFAFYVGEYETGNFLELTRVDNFYISAPPEMTRLLIDTCTNVVFEG-AYDPYEIPNPGLDPPTGGEQTSNVVITGNSSGIVFKNMPVGPGIEPR-ILMETTEPLTLDDIPRYEEAETGDCIVQVPEGSTEETLIQMNSDDILTLSGDCWVY 1971
VE ++G DA R V+E L+ TG LP + G P +D R S GGCDSP F GCH++YIKDGDMS DSRW+CGP A G+ ++ + C ++ LN FRYVRQIQ AFH+GDE + EF+I+ TVV S ISSG + D +TFD+ VHT+ +R+VP FQ + Q IKEMV+LE F+ GT+PVF DD G+ + T F F +P D + + ++ ++++FP DR F F + Y D+ + FTSAGG T ETF +S P+ ++ + I AV GPTFE+ YPTLRV+DFQI+GEI K G F+V T W +PD+ + +DQE IMT ICETKG FDGTDCVGELD+++V +S+ G +F++GP+FLKS VTL G ++ + TY +++ + EDAVIVIDG TG ++ + +TG I PGT+GN+CLEVR SQDL L + + ARTGAARF DS NI+ GEYETGNF+E+ VD+F+ PE+ L I+ NVV +G A + YE+P P PPTGG+Q ++VVITG SSGIVF++ + G + +LME+TEPLTLD+I YE AE+GDCI+ VP S ++ ++Q+NS IL+ GDCWV+
Sbjct: 327 VELRVG-DAPVRPVSEKAWLQPTGMLPLAADTGSSGHPNFDNREPSAGGCDSPAHFEGCHVYYIKDGDMSDDSRWTCGPLAAGNLVS------NNEDCHLMLSLNYFRYVRQIQFAFHMGDEQYNEFSIE---------TVVSSAISSGDSTDYQTFDIEVHTNEIRLVPVFQRVDQWIGIKEMVILETKEMGFINGTLPVFDYSYWFPRGDGGDDDSSGDSDEDVPTRFEFHMPRPEDYFQFRVPPSTVTAVKLRFPSDRQFVFRVSYDEIETDEEIVEEFTSAGGPDTMETFTLSAPADVERFVYITAVSGPTFESQPDYPTLRVIDFQIVGEIKKDPGHFEVVTTTMTV--WRVVPDIIGDGVSDQEEIMTTICETKGGAFDGTDCVGELDDSSVHISMK-NGHYFLDGPVFLKSGVTLSGGDYSYNEPSRTYLVLHNHTRL----EDAVIVIDGVTGGEVDSVYIEHQTP-MTGDITPGTLGNLCLEVRGSQDLKLAE-IDCHQARTGAARFVDSKNISVSVIRDGEYETGNFMEVDGVDDFHFEGIPEVAGLRIEDSNNVVLQGGASNVYEVPTPVFLPPTGGDQAASVVITGASSGIVFQDCSIYAGGDTAPVLMESTEPLTLDNILGYEAAESGDCIIDVPPESGDDLIVQLNSYAILSKDGDCWVW 975
BLAST of mRNA_F-distichus_contig102.163.1 vs. uniprot
Match: D8LG22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG22_ECTSI) HSP 1 Score: 407 bits (1047), Expect = 1.660e-132 Identity = 227/476 (47.69%), Postives = 313/476 (65.76%), Query Frame = 1
Query: 592 VFHTRDDFDVGEGI-TEATTGFAFDIPDVGDSYTMTFADAKLSGLRMKFPKDRTFTFDIVYRNSSFDDVSQQRFTSAGGDKTFETFNMSTPS-ID-NIEIVAVEGPTFENNSSYPTLRVVDFQILGEISKPSGTFDVHRTVEVSGGWGWIPDLFAEASADQEVIMTAICETKGATFDGTDCVGELDETAVTVSLPPGGGFFVNGPIFLKSNVTLEGKWNVEYGTWTYFYVYDGPNISSTGEDAVIVIDGTTGVSLEYICFSGWWEGVTGSIVPGTVGNICLEVRNSQDLALGKKLFFDSARTGAARFTDSSNITAFAFYVG-EYETGNFLELTRVDNFYISAPPEMTRLLIDTCTNVVFEGAYDPYEIPNPGLDPPTGG-EQTSNVVITGNSSGIVFKNMPVGPGIEPRILMETTEPLTLDDIPRYEEAETGDCIVQVPEGSTEETLIQMNSD------------DILTLSGDCWV 1968
++ + D D EG + T F FD+P GD M + ++ LRM+FP DR+F F + Y DV ++ FTSAGG KT+ETF ++TP+ +D ++IVAV GPTF++ YP LRVVDFQ++GE+ K G DV T + WG +PD+ E ++Q+ +M AICE KG+TFDG DCVGEL+++ VT+ L G ++++GPIFLKS V ++G+W EY T+ + +Y+G + + TGEDA++V+DG TG L + F E TG IVPGTVGN L VRNSQD+ + F S R G A FTDS N++AF FY G E ETGN++ELTRVD+ + A P M+ +L DTC ++VFEG D + IP PP G +QT+NVV+TG+SSGIVF+N V G EPRIL+E+TEPLTLD++ RY +AE GDCIV+VPEG+ E+ ++Q+ ++ +L SG CWV
Sbjct: 27 LWQSNSDDDEEEGADVDIPTRFEFDLPIEGDYIDMDVPPSTVTALRMRFPADRSFVFMVEYG-----DVVEE-FTSAGGPKTWETFTLATPAEVDYGLDIVAVTGPTFDHIPDYPALRVVDFQVVGELRKEPGYIDVVTTTIET--WGVVPDVIGEGVSEQKNVMKAICEAKGSTFDGVDCVGELNDSEVTIKLHFG-DYYIDGPIFLKSGVFIDGEWQDEYPTFCWLVLYEGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEE-PTGDIVPGTVGNTNLAVRNSQDIQFSEMGLF-SGRNGGATFTDSRNMSAFIFYNGDELETGNYMELTRVDDVHFRALPNMSGVLFDTCNDIVFEGVDD-FAIPTAYFSPPVAGSDQTANVVVTGDSSGIVFQNFVVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWV 490
BLAST of mRNA_F-distichus_contig102.163.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE) HSP 1 Score: 141 bits (356), Expect = 3.230e-31 Identity = 167/639 (26.13%), Postives = 270/639 (42.25%), Query Frame = 1
Query: 184 FYIKDGDMSSDSRWSCGPTAVGDDITPDTPYDDGTVCGVVFELNIFRYVRQIQLAFHLGDEYHYEFAIQA-YTKNYEWVTVVPSVISSGTTVDLETFDVSVHTDTLRIVPSFQSIGQMFSIKEMVVLENA------FVEGTVPVFHTRDDFDVGEGITEATTGFAFDIPD-VGDSYTMTFA-DAKLSGLRMKFPKDRTFTFDIVYRNSSFDDVSQQRFTSAGGDKT--FETFNMST-----PSIDNIEIVAVEGPTFENNSSYPTLRVVDFQILGE-ISKPSGTFDVHRTV--EVSGGWGWIPDLFAEASADQEVIMTAICETKGATFDGTDCVGELDETAVTVSLPPGGGFFVNGPIFLKSNVTLEGKWNVEYGTWTYFYVYDGPNISSTGEDAVIVIDGTTGVSLEYICFSGWWEGVTGSIVPGT--VGNICLEVRNSQDLALGKKLFFDSARTGAARFTDSSNITAFAFYVGEYETGNFLELTRVDNFYISAPPEMTRLLIDTCTNVVFEGAYDPYEIPNPGL----------DPPTGGEQTSNVVITGNSSG-------------IVFKNMPVGPGIEPRILMETTEPLTLDDIPRYEEAETGDCIVQVPEGSTEETLIQMNSDDILTLSGDCWV 1968
F+ KDGD S+ W+C VG GT C + F+L +R+++Q+++A G E + I Y V SSGTT + ET+D V T+ + I F S Q SI E+ +E E P+ R D G T + D D +G + A A + + +KFP T+ FD+ + + T T +++F++S + I IV V+G S P ++D +++G I P+ T V T +G PD AE + DQ++IM AIC K A+FDG DCVG D TV LP G ++V+G IF+KS V L+G ++ + +T + +G T DA++V+DG + + I G ++ T + P +G+ L V S ++ L R RF D + + + G + EL + A T L++D+C ++ + + YE G+ D G E T GN G + F ++ V +P +++ + ++ +++ E C++Q + ST I + D+ LTL G C+V
Sbjct: 560 FHSKDGDFST--SWTC----VG-----------GTECTLRFDLFSWRHIKQVKIALPDGAERAVDMRIAGRYDDELAAAFAEAYVTSSGTTDEFETYDFDVFTNEILISGVFTSASQTISISEVEFMEELQAGEIQISEWNTPLADARVD-----GPTTDAFDWTTDSDDAIGRTVEFELAWYAMVDAVEIKFPVGDTYKFDLELNDDQIRGEILKTITGFESADTADWQSFDLSQHLDADQFLTEINIV-VQG----TGSGAPGFAMLDIRVMGTAIDNPTDTVYVGSTFIERWTGLTDRYPDFVAEGTGDQKIIMEAICTVKKASFDGVDCVGGDDAATGTVVLPQG-SWYVDGNIFMKSGVFLDGSFSEDSPYFTGIILEEGA-AGKTDIDAMVVMDGISNAMTDNIWIRGHYDPDTSNDTPAVPGLGSTGLSVVGSTNITL---------RDAEIRFLDGDALVVRDSNMISIDAGEYEELYSP---WSLASSRGTGLIVDSCDSI-YVRRHTLYENGVAGIHIVGTNNFTFDATIGEESTVGEGNVGNLDGQQPIDVIIESSTLVTFNDLRVQSSNDPIMMVSDSSTVSFNNL-GLSLVEADACVIQADDPST--VTIDADEDE-LTLDGSCYV 1152 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102.163.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig102.163.1 >prot_F-distichus_contig102.163.1 ID=prot_F-distichus_contig102.163.1|Name=mRNA_F-distichus_contig102.163.1|organism=Fucus distichus monoicous|type=polypeptide|length=658bp VEFQIGEDASQRAVAETQGLEETGPLPAGREDGGYDFPVYDVRVSSEGGCback to top mRNA from alignment at F-distichus_contig102:17907..26241+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig102.163.1 ID=mRNA_F-distichus_contig102.163.1|Name=mRNA_F-distichus_contig102.163.1|organism=Fucus distichus monoicous|type=mRNA|length=8335bp|location=Sequence derived from alignment at F-distichus_contig102:17907..26241+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig102:17907..26241+ >mRNA_F-distichus_contig102.163.1 ID=mRNA_F-distichus_contig102.163.1|Name=mRNA_F-distichus_contig102.163.1|organism=Fucus distichus monoicous|type=CDS|length=3948bp|location=Sequence derived from alignment at F-distichus_contig102:17907..26241+ (Fucus distichus monoicous)back to top |