mRNA_F-distichus_contig101858.154.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig101858.154.1
Unique NamemRNA_F-distichus_contig101858.154.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101858.154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101858contigF-distichus_contig101858:1697..1816 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size120
Cds size120
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928933.2396853-CDS-F-distichus_contig101858:1696..18161622928933.2396853-CDS-F-distichus_contig101858:1696..1816Fucus distichus monoicousCDSF-distichus_contig101858 1697..1816 +
1690885072.612538-CDS-F-distichus_contig101858:1696..18161690885072.612538-CDS-F-distichus_contig101858:1696..1816Fucus distichus monoicousCDSF-distichus_contig101858 1697..1816 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101858.154.1prot_F-distichus_contig101858.154.1Fucus distichus monoicouspolypeptideF-distichus_contig101858 1697..1816 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig101858.154.1

>prot_F-distichus_contig101858.154.1 ID=prot_F-distichus_contig101858.154.1|Name=mRNA_F-distichus_contig101858.154.1|organism=Fucus distichus monoicous|type=polypeptide|length=40bp
DVVSFSAAITALGRAGQRGRALELLREMREEGVAPNVRG*
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mRNA from alignment at F-distichus_contig101858:1697..1816+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig101858.154.1 ID=mRNA_F-distichus_contig101858.154.1|Name=mRNA_F-distichus_contig101858.154.1|organism=Fucus distichus monoicous|type=mRNA|length=120bp|location=Sequence derived from alignment at F-distichus_contig101858:1697..1816+ (Fucus distichus monoicous)
GACGTGGTGAGCTTCAGCGCGGCCATCACGGCCTTGGGCAGGGCGGGGCA
GAGGGGGCGTGCGCTGGAGCTGCTGCGGGAGATGCGGGAGGAGGGAGTGG
CCCCAAACGTGAGAGGGTAG
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Coding sequence (CDS) from alignment at F-distichus_contig101858:1697..1816+

>mRNA_F-distichus_contig101858.154.1 ID=mRNA_F-distichus_contig101858.154.1|Name=mRNA_F-distichus_contig101858.154.1|organism=Fucus distichus monoicous|type=CDS|length=240bp|location=Sequence derived from alignment at F-distichus_contig101858:1697..1816+ (Fucus distichus monoicous)
GACGTGGTGAGCTTCAGCGCGGCCATCACGGCCTTGGGCAGGGCGGGGCA
GAGGGGGCGTGCGCTGGAGCTGCTGCGGGAGATGCGGGAGGAGGGAGTGG
CCCCAAACGTGAGAGGGTAGGACGTGGTGAGCTTCAGCGCGGCCATCACG
GCCTTGGGCAGGGCGGGGCAGAGGGGGCGTGCGCTGGAGCTGCTGCGGGA
GATGCGGGAGGAGGGAGTGGCCCCAAACGTGAGAGGGTAG
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