mRNA_F-distichus_contig101780.147.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig101780.147.1
Unique NamemRNA_F-distichus_contig101780.147.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig101780.147.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL)

HSP 1 Score: 273 bits (698), Expect = 4.600e-83
Identity = 159/433 (36.72%), Postives = 252/433 (58.20%), Query Frame = 1
Query:    7 KYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGR*LDV*MAFLEADITEELYVELPDGYRDSPNQVGRLQKTMYGLMHAGLLWPKNFGGELIVKELERSQADPCVFRRKNLGKVVVIIVVYVDDLLV--LSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHITRDRKARTVTFDQQHYAQTVTERFEIRKTSVIPVPTGKS-PLSKADGPQNDAEIAEMHGIPYREAVGALMWVANMTGPGLAYTAHMLAKFDDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITAPATSESEYVALAEIANELRFLRQVNAFIVLPIDYNIRVHEDNEGAIKMSENRFSSRRTRHIDVKHDMVRDTVDGGIVRVEYSMSNRE 1296
            ++K R VA GF Q+ G+ + E+ +   +  SIR+ L+V     +    LDV  AFL AD+ E++Y+E P+G +   ++V +L K +YGL  AG  W K   G LI    +   +D C++  +  G     I +YVDD++V   ++T+ DE + L  + + F IK+LG + + LG  I  DR  R ++ +Q HY +T+ ERF  +    +  P  +S  LSKADGP++D + AEM   PYR  +G L +VA  T P +A+    L++F +NPGP HW A ++ L+YLK T   G++YGG  E+     + DAD  +  D RRSVSG  +M+ GG I + ++ Q   A ++SE+EY+AL+    E+ ++R +   + + I   I+V EDN+GAI ++ N     RT+HID++H  VRD V   ++++ Y  + R+
Sbjct:   56 RWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGRA-GGDTTYICLYVDDMVVGGRTQTRVDEVKKL--IAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVRTMLHDLGINIKKPIQVWEDNQGAIALAHNAGYHARTKHIDIRHHYVRDLVADSVIKLSYVETQRQ 485          
BLAST of mRNA_F-distichus_contig101780.147.1 vs. uniprot
Match: UPI001F00A048 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00A048)

HSP 1 Score: 277 bits (709), Expect = 1.020e-79
Identity = 161/427 (37.70%), Postives = 247/427 (57.85%), Query Frame = 1
Query:    1 VEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGR*LDV*MAFLEADITEELYVELPDGYRDS-PNQVGRLQKTMYGLMHAGLLWPKNFGGELIVKELERSQADPCVFRRKNLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHITRDRKARTVTFDQQHYAQTVTERFEIRKTSVIPVPTGKS-PLSKADGPQNDAEIAEMHGIPYREAVGALMWVANMTGPGLAYTAHMLAKFDDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITAPATSESEYVALAEIANELRFL-RQVNAFIVLPIDYNIRVHEDNEGAIKMSENRFSSRRTRHIDVKHDMVRDTVDGGIVRV 1272
            V KYK R V KGF+Q KGI + E  SP    +SIR+ L ++A ++ E   +DV  AFL   + EE+Y+E P+G+  S  N V +L+K++YGL  A   W K F   +  +  +++ AD CV+ +K      V +++YVDD+L++ +  +  +Q  ++L  SF +KDLG     LG  ITRDRK R +   Q+ Y + V  RF +     + +P      LSK   P +  EI EM  +PY  AVG+LM+    T P +A+    +++F  NPG EHW+AV   L+YLK T  L + YGGA  D  L  + DAD A   D+R+S SG      GGA+SW SR Q+  A +T+E+EY+A AE   E+ +L R +  F +   +Y  +VH D++ A+ +S+N     RT+HID+++  +R+ +D  ++++
Sbjct:  706 VVKYKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGMVASMNLELEQMDVKTAFLHGGLDEEIYMEQPEGFEVSGDNLVCKLKKSLYGLKQAPRQWYKKFDSCMTSQGYKKTSADECVYIQKFSDGNFVALLLYVDDILIVGKDAKKINQLKKELSKSFDMKDLGPAQQILGMQITRDRKNRRLWLSQEKYIERVLARFNMNNAKPVSIPLANHFKLSKRSCPSSKEEIGEMSSVPYSSAVGSLMYAMVCTRPDIAHAVGKVSRFLSNPGKEHWEAVKWILRYLKGTIKLCLCYGGA--DPILEGYTDADMAGDLDSRKSTSGFIFTFAGGAVSWQSRLQKCVALSTTEAEYIAAAEAGKEMLWLKRYLQEFGIKQKEY--KVHCDSQSALDLSKNSMYHSRTKHIDIRYHWIREVMDRQLLKL 1128          
BLAST of mRNA_F-distichus_contig101780.147.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 6.720e-77
Identity = 150/400 (37.50%), Postives = 234/400 (58.50%), Query Frame = 1
Query:   67 ESSSPTPTQSSIRMALAVMALLDWEGR*LDV*MAFLEADITEELYVELPDGYRDSPNQVGRLQKTMYGLMHAGLLWPKNFGGELIVKELERSQADPCVFRRKNLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHITRDRKARTVTFDQQHYAQTVTERFEIRKTSVIPVPTGKSPLSKADGPQNDAEIAEMHGIPYREAVGALMWVANMTGPGLAYTAHMLAKFDDNPGPEHWKAVMKALQYLKRTASLGVTYG-GATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITAPATSESEYVALAEIANELRFLRQVNAFIV----LPIDYNIRVHEDNEGAIKMSENRFSSRRTRHIDVKHDMVRDTV 1251
            E+ +PT   SS+R+  A+    +   R  D+  AF+++D+ E++++ LP+G       + +L K++YGL  A   W  +    LI     +  AD CVFR    G+VVV +VV+VDD+  + E ++ + Q   DL +  P+K+LG++  Y GC   RD  A T+   QQ YA+ +   F +     IP+P G   LS+ D    D E+      P+RE +G+LMW+A  T P +A     +A++  +P   HW+A +  L Y+ RT+ LG+T+  G+   + +  +VDAD+AS    RRSVSGG VM GGG ISWFSR Q+    +T+E+EYV+LA++  E+ FLRQV  F++    +P    I V EDN+GAI++++N  S+  ++HIDV+H  +R+ V
Sbjct:   10 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCD-QFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFD---QDEEVVSW---PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPC---IPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELV 398          
BLAST of mRNA_F-distichus_contig101780.147.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE)

HSP 1 Score: 270 bits (689), Expect = 1.290e-76
Identity = 149/428 (34.81%), Postives = 252/428 (58.88%), Query Frame = 1
Query:    1 VEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGR*LDV*MAFLEADITEELYVELPDGYRDSPNQVGRLQKTMYGLMHAGLLWPKNFGGELIVKELERSQADPCVFRRKNLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHITRDRKARTVTFDQQHYAQTVTERFEIRKTSVIPVPTGKS-PLSKADGPQNDAEIAEMHGIPYREAVGALMWVANMTGPGLAYTAHMLAKFDDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITAPATSESEYVALAEIANELRFLRQVNAFIVLPID-YNIRVHEDNEGAIKMSENRFSSRRTRHIDVKHDMVRDTVDGGIVRVEY 1278
            + K+K R V KG  Q KG+ ++E+ SP    SSIR  LA+ A  D +   +D   AFL+ D+TEE+Y+  P+GY++S  +V RL+K++YGL  A  +W       L    L +S+ DPC++ + +  K +V + V+VDDLL+ S+ K+   +    L   F + D+GE    LG  I+RDR+ + +  DQ+ Y   V  RF +   +    P   +  LSK   P +  E  +M  IPY+EAVG+L++ + +  P +A+   ++++F+ NPGP HW AV + L+Y+K T+   + Y G T+  +++ + D+D AS  D R+SV+G   ++  G++SW ++ Q  TA +T+E+EY+AL+    E  +LR ++  +V P +   +R+  DN+GA+ +++N     RT+HIDV+H  +R+ +   +++  Y
Sbjct:  900 IVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQES-GKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYYKSS-QKKMVFVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDG-TKSSEITGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLRGLSEELVPPSERIPLRIFVDNQGALNLAQNGSYQSRTKHIDVRHHFLREKISEKLIKPTY 1324          
BLAST of mRNA_F-distichus_contig101780.147.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 269 bits (688), Expect = 1.850e-76
Identity = 149/432 (34.49%), Postives = 247/432 (57.18%), Query Frame = 1
Query:    1 VEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGR*LDV*MAFLEADITEELYVELPDGYRDSPNQVGRLQKTMYGLMHAGLLWPKNFGGELIVKELERSQADPCVFRRKNLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHITRDRKARTVTFDQQHYAQTVTERFEIRKTSVIPVPTGKSPLSKADGPQNDAEIA--EMHGIP-YREAVGALMWVANMTGPGLAYTAHMLAKFDDNPGPEHWKAVMKALQYLK--RTASLGVTYGGATE-DMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITAPATSESEYVALAEIANELRFLRQVNAFIVLPIDYNIRVHEDNEGAIKMSENRFSSRRTRHIDVKHDMVRDTVDGGIVRVEY 1278
            V +YK R VA+GF QI G+ Y ++ SP     ++R  +A+ A+ DWE R +D+  A+L  ++ EE+++E P+G+ D   +V RL+  +YGL  AG +W K    +L      R+ ADPCV+     GK+  I+ V+VDD+++  +++      +  L+  F +KDLGE    LG  I R+RK +T+T  Q++Y  T+ ERF   K + IP+P   +   +    + D EI   E H +  Y+  +G++M+ +  T P LAY    L++F  NPG EH  A+ +  +YL   R   +G+ YGG  +  + +  + DAD AS P+ R+S+SG   +LGGGAISW S+ Q   A +++E+EY+A    A    +L+++   I + +  ++ +  DN+  I +S +    +RT+HID+++  +R+ V  GI+   Y
Sbjct:  915 VNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERFNYSKINPIPIPLDPNVTLR----KRDDEITPPEKHLVKEYQTKLGSIMYASIGTMPQLAYAVQTLSQFSSNPGAEHMSALKRVFKYLAHARDHEVGIVYGGTRQWPVDIIGYTDADWASNPNDRKSISGYVFLLGGGAISWSSKKQTTVALSSTEAEYMAATHAARHAIWLQRLFQDIGIQLPDSMALFIDNQSTISISNDVMFHQRTKHIDIQYHFIRNLVIDGIIDTYY 1341          
BLAST of mRNA_F-distichus_contig101780.147.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 2.480e-76
Identity = 154/414 (37.20%), Postives = 239/414 (57.73%), Query Frame = 1
Query:   25 VAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGR*LDV*MAFLEADITEELYVELPDGYRDSPNQVGRLQKTMYGLMHAGLLWPKNFGGELIVKELERSQADPCVFRRKNLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHITRDRKARTVTFDQQHYAQTVTERFEIRKTSVIPVPTGKSPLSKADGPQNDAEIAEMHGIPYREAVGALMWVANMTGPGLAYTAHMLAKFDDNPGPEHWKAVMKALQYLKRTASLGVTYG-GATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITAPATSESEYVALAEIANELRFLRQVNAFIV----LPIDYNIRVHEDNEGAIKMSENRFSSRRTRHIDVKHDMVRDTV 1251
            V K FR +      E+ +PT   SS+R+  A+    +   R  D+  AF+++D+ E++++ LP+G       + +L K++YGL  A   W  +    LI     +  AD CVFR    G+VVV +VV+VDD+  + E ++ + Q   DL +  P+K+LG++  Y GC   RD  A T+   QQ YA+ +   F +     IP+P G   LS+ D    D E+      P+RE +G+LMW+A  T P +A     +A++  +P   HW+A +  L Y+ RT+ LG+T+  G+   + +  +VDAD+AS    RRSVSGG VM GGG ISWFSR Q+    +T+E+EYV+LA++  E+ FLRQV  F++    +P    I V EDN+GAI++++N  S+  ++HIDV+H  +R+ V
Sbjct:  170 VEKEFRGLMEADCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCD-QFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFD---QDEEVVSW---PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPC---IPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELV 572          
BLAST of mRNA_F-distichus_contig101780.147.1 vs. uniprot
Match: A0A4Y2Q6W6_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2Q6W6_ARAVE)

HSP 1 Score: 256 bits (654), Expect = 3.490e-76
Identity = 148/432 (34.26%), Postives = 245/432 (56.71%), Query Frame = 1
Query:    1 VEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGR*LDV*MAFLEADITEELYVELPDGYR--DSPNQVGR---LQKTMYGLMHAGLLWPKNFGGELIVKELERSQADPCVFRRKNLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHITRDRKARTVTFDQQHYAQTVTERFEIRKTSVI--PVPTGKSPLSKADGPQNDAEIAEMHGIPYREAVGALMWVANMTGPGLAYTAHMLAKFDDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITAPATSESEYVALAEIANELRFLRQVNAFIVLPIDYNIRVHEDNEGAIKMSENRFSSRRTRHIDVKHDMVRDTVDGGIVRVE 1275
            +E+YK R VAKGF QI+G+ Y E+ SP    +++R+ LA  A+ DWE   LD  +AF++  + EE+Y+++P+G    D  N  G+   L K + GL  +G +W +     L+  +  +S  D C + + +  K +VI+ +YVDDLL+ S + + ++   E L S+F +KDLG  S  LG  I RDRK   V+ +Q  Y + V  R+ + ++  +  P+ T KS ++K+      A + ++  +PY+ AVG+L++ A  T P + YT ++L +F  NP   HW AV + ++YL+ TA   + Y     D  +  + D+++       RS +G   M+GGGA+SW S+ Q   A +T+E+EY+AL+    E+ +L ++   I L     I VH  N GAI +S+N     R++HID++H  V + +  G + V+
Sbjct:   84 IERYKTRLVAKGFSQIEGVDYNETFSPVVRYATLRVLLAFAAIYDWEIDQLDAVIAFVQGTLDEEIYMKIPEGLNEYDQENLEGKVLKLNKALDGLKQSGRVWYQMLENGLVEMDFRQSSFDSCAYIKVDQNKDIVIVTIYVDDLLIFSNSVKLKNWVKEQLTSTFKMKDLGTASYCLGIKIERDRKNGYVSVNQTQYVEGVLRRYNMHESHPVTTPLDTNKS-ITKSI-----ANMEDLTHVPYQMAVGSLLYAAQATRPDIGYTVNLLCQFCSNPSRTHWTAVKRIMRYLRGTAETLLNYSRNNGDAVIG-YCDSNYGGDIADHRSTTGYVFMIGGGAVSWCSKRQPTVATSTTEAEYMALSAATKEVIWLNKIVTDIGLSHIKTIPVHCGNNGAINLSKNNMYHARSKHIDIQHHFVCEVIKNGHITVK 508          
BLAST of mRNA_F-distichus_contig101780.147.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 2.690e-75
Identity = 162/441 (36.73%), Postives = 252/441 (57.14%), Query Frame = 1
Query:    1 VEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAV-----MALLDWEGR*LDV*MAFLEADITEELYVELPDGYRDSPNQVGRLQKTMYGLMHAGLLWPKNFGGELIVKELERSQADPCVFRRKNLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHITRDRKARTVTFDQQHYAQTVTERFEIRKTSVIPVPTGKSPLSKAD-GPQNDAEIAEMHGIPYREAVGALMWVANMTGPGLAYTAHMLAKFDDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITAPATSESEYVALAEIANELRFLRQVNAFIVLPID-YNIRVHEDNEGAIKMSENRFSSRRTRHIDVKHDMVRDTVDGGIVRVEYSMSNRENS 1302
            ++ +K R VA+GF QI  + Y  SSSP P+ +SI++ LAV     M L  W     DV  A+  A + EE++++LP G  D  +++ + ++ +YGL  +G  W  +    L+    E+ +ADPCVFR+     VV+IIV+YVDD+LV   + +D  + L  L   FP K+LGE   + GC I RD +A T+   Q  Y  ++ ERF+++ TS IP   G      AD GP+ + E  E    P REA+G++MWV+  + P +++    +A+    P   HW A+ K L YLK T  LG+TY   +  + L+ +VDA +A   D RRSVSG A  +GG  +S  S+ Q I + +++E+EY+A  E   E  F+R V +F+       +I+V EDN+GAI + +N  SS RT+HIDV++  +R     G + V++  +  +++
Sbjct:  798 IDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHW-----DVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG------ADLGPKREDE--EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGS-GLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHA 1222          
BLAST of mRNA_F-distichus_contig101780.147.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 5.430e-75
Identity = 162/441 (36.73%), Postives = 252/441 (57.14%), Query Frame = 1
Query:    1 VEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAV-----MALLDWEGR*LDV*MAFLEADITEELYVELPDGYRDSPNQVGRLQKTMYGLMHAGLLWPKNFGGELIVKELERSQADPCVFRRKNLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHITRDRKARTVTFDQQHYAQTVTERFEIRKTSVIPVPTGKSPLSKAD-GPQNDAEIAEMHGIPYREAVGALMWVANMTGPGLAYTAHMLAKFDDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITAPATSESEYVALAEIANELRFLRQVNAFIVLPID-YNIRVHEDNEGAIKMSENRFSSRRTRHIDVKHDMVRDTVDGGIVRVEYSMSNRENS 1302
            ++ +K R VA+GF QI  + Y  SSSP P+ +SI++ LAV     M L  W     DV  A+  A + EE++++LP G  D  +++ + ++ +YGL  +G  W  +    L+    E+ +ADPCVFR+     VV+IIV+YVDD+LV   + +D  + L  L   FP K+LGE   + GC I RD +A T+   Q  Y  ++ ERF+++ TS IP   G      AD GP+ + E  E    P REA+G++MWV+  + P +++    +A+    P   HW A+ K L YLK T  LG+TY   +  + L+ +VDA +A   D RRSVSG A  +GG  +S  S+ Q I + +++E+EY+A  E   E  F+R V +F+       +I+V EDN+GAI + +N  SS RT+HIDV++  +R     G + V++  +  +++
Sbjct: 1177 IDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHW-----DVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG------ADLGPKREDE--EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGS-GLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHA 1601          
BLAST of mRNA_F-distichus_contig101780.147.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 5.530e-75
Identity = 162/441 (36.73%), Postives = 252/441 (57.14%), Query Frame = 1
Query:    1 VEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAV-----MALLDWEGR*LDV*MAFLEADITEELYVELPDGYRDSPNQVGRLQKTMYGLMHAGLLWPKNFGGELIVKELERSQADPCVFRRKNLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHITRDRKARTVTFDQQHYAQTVTERFEIRKTSVIPVPTGKSPLSKAD-GPQNDAEIAEMHGIPYREAVGALMWVANMTGPGLAYTAHMLAKFDDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITAPATSESEYVALAEIANELRFLRQVNAFIVLPID-YNIRVHEDNEGAIKMSENRFSSRRTRHIDVKHDMVRDTVDGGIVRVEYSMSNRENS 1302
            ++ +K R VA+GF QI  + Y  SSSP P+ +SI++ LAV     M L  W     DV  A+  A + EE++++LP G  D  +++ + ++ +YGL  +G  W  +    L+    E+ +ADPCVFR+     VV+IIV+YVDD+LV   + +D  + L  L   FP K+LGE   + GC I RD +A T+   Q  Y  ++ ERF+++ TS IP   G      AD GP+ + E  E    P REA+G++MWV+  + P +++    +A+    P   HW A+ K L YLK T  LG+TY   +  + L+ +VDA +A   D RRSVSG A  +GG  +S  S+ Q I + +++E+EY+A  E   E  F+R V +F+       +I+V EDN+GAI + +N  SS RT+HIDV++  +R     G + V++  +  +++
Sbjct: 1197 IDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHW-----DVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG------ADLGPKREDE--EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGS-GLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHA 1621          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101780.147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8K1CTN1_PYTOL4.600e-8336.72Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
UPI001F00A0481.020e-7937.70DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A6H5JLN0_9PHAE6.720e-7737.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0A9Z683_LYGHE1.290e-7634.81Retrovirus-related Pol polyprotein from transposon... [more]
A0A0C3AKI0_9AGAM1.850e-7634.49Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A6H5KQB8_9PHAE2.480e-7637.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y2Q6W6_ARAVE3.490e-7634.26Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5KSG8_9PHAE2.690e-7536.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE5.430e-7536.73Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE5.530e-7536.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101780contigF-distichus_contig101780:1..1317 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score225.3
Seed ortholog evalue4.8e-56
Seed eggNOG ortholog67593.Physo139221
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size1317
Cds size1155
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928932.93845-UTR-F-distichus_contig101780:0..1621622928932.93845-UTR-F-distichus_contig101780:0..162Fucus distichus monoicousUTRF-distichus_contig101780 1..162 +
1690885072.4657292-UTR-F-distichus_contig101780:0..1621690885072.4657292-UTR-F-distichus_contig101780:0..162Fucus distichus monoicousUTRF-distichus_contig101780 1..162 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928932.948186-CDS-F-distichus_contig101780:162..13171622928932.948186-CDS-F-distichus_contig101780:162..1317Fucus distichus monoicousCDSF-distichus_contig101780 163..1317 +
1690885072.478949-CDS-F-distichus_contig101780:162..13171690885072.478949-CDS-F-distichus_contig101780:162..1317Fucus distichus monoicousCDSF-distichus_contig101780 163..1317 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101780.147.1prot_F-distichus_contig101780.147.1Fucus distichus monoicouspolypeptideF-distichus_contig101780 163..1317 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig101780.147.1

>prot_F-distichus_contig101780.147.1 ID=prot_F-distichus_contig101780.147.1|Name=mRNA_F-distichus_contig101780.147.1|organism=Fucus distichus monoicous|type=polypeptide|length=385bp
MAFLEADITEELYVELPDGYRDSPNQVGRLQKTMYGLMHAGLLWPKNFGG
ELIVKELERSQADPCVFRRKNLGKVVVIIVVYVDDLLVLSETKQDEHQAL
EDLRSSFPIKDLGEISNYLGCHITRDRKARTVTFDQQHYAQTVTERFEIR
KTSVIPVPTGKSPLSKADGPQNDAEIAEMHGIPYREAVGALMWVANMTGP
GLAYTAHMLAKFDDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKL
SAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITAPATSESEYV
ALAEIANELRFLRQVNAFIVLPIDYNIRVHEDNEGAIKMSENRFSSRRTR
HIDVKHDMVRDTVDGGIVRVEYSMSNRENSMRTY*
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mRNA from alignment at F-distichus_contig101780:1..1317+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig101780.147.1 ID=mRNA_F-distichus_contig101780.147.1|Name=mRNA_F-distichus_contig101780.147.1|organism=Fucus distichus monoicous|type=mRNA|length=1317bp|location=Sequence derived from alignment at F-distichus_contig101780:1..1317+ (Fucus distichus monoicous)
GTAGAAAAATACAAGTGCCGCTTCGTGGCCAAGGGTTTCCGCCAGATCAA GGGGATTCATTACCAAGAGTCATCGTCGCCGACACCTACACAGTCGAGCA TCCGGATGGCGCTGGCGGTGATGGCCCTGTTGGACTGGGAGGGGCGGTAG CTTGACGTATAAATGGCGTTTCTCGAGGCGGATATTACGGAGGAGCTCTA CGTTGAGCTCCCCGACGGGTATCGTGACTCGCCGAACCAGGTTGGACGAC TACAGAAGACCATGTACGGCCTGATGCACGCCGGACTGCTGTGGCCGAAG AATTTCGGCGGAGAGTTGATAGTGAAGGAGTTAGAAAGGTCCCAAGCCGA TCCCTGCGTGTTCCGGCGGAAAAATCTAGGGAAGGTCGTCGTCATCATTG TGGTCTACGTTGACGATCTACTAGTGCTGAGCGAAACGAAGCAGGACGAG CATCAGGCGCTGGAAGACCTTCGATCCAGCTTCCCCATCAAGGATCTAGG GGAGATCTCGAACTACCTGGGATGCCACATTACTCGGGACCGCAAGGCCA GGACGGTGACGTTCGATCAGCAGCATTACGCGCAGACGGTAACCGAGCGA TTCGAAATTCGAAAGACCAGCGTGATCCCTGTCCCTACGGGGAAATCACC ACTTTCGAAGGCAGACGGGCCGCAAAATGACGCTGAGATCGCAGAGATGC ATGGCATCCCGTATCGCGAGGCAGTGGGGGCACTAATGTGGGTAGCCAAC ATGACTGGGCCTGGCCTAGCTTACACCGCGCACATGCTTGCCAAGTTCGA TGACAACCCCGGGCCCGAGCATTGGAAGGCAGTAATGAAAGCGCTACAGT ACCTGAAACGAACGGCGAGCCTAGGGGTAACATATGGAGGCGCGACGGAG GACATGAAGTTATCGGCATGGGTGGACGCCGATCATGCATCATGCCCTGA TACGCGCCGTTCGGTATCGGGGGGCGCGGTGATGCTCGGCGGAGGGGCAA TCAGTTGGTTTTCACGGGCGCAGAGAATAACCGCGCCAGCGACGTCCGAA TCGGAGTACGTCGCACTGGCGGAGATTGCAAACGAGCTACGTTTTCTTCG GCAGGTGAACGCGTTTATAGTACTTCCAATCGACTACAACATCCGTGTTC ACGAGGACAACGAGGGTGCTATCAAGATGTCAGAGAATAGGTTTAGCAGT CGACGAACAAGACACATCGACGTGAAGCATGATATGGTTCGCGATACCGT CGATGGGGGAATAGTCCGTGTAGAATACAGTATGTCAAATCGAGAGAACA GCATGCGGACGTACTAA
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Coding sequence (CDS) from alignment at F-distichus_contig101780:1..1317+

>mRNA_F-distichus_contig101780.147.1 ID=mRNA_F-distichus_contig101780.147.1|Name=mRNA_F-distichus_contig101780.147.1|organism=Fucus distichus monoicous|type=CDS|length=2310bp|location=Sequence derived from alignment at F-distichus_contig101780:1..1317+ (Fucus distichus monoicous)
ATGGCGTTTCTCGAGGCGGATATTACGGAGGAGCTCTACGTTGAGCTCCC
CGACGGGTATCGTGACTCGCCGAACCAGGTTGGACGACTACAGAAGACCA
TGTACGGCCTGATGCACGCCGGACTGCTGTGGCCGAAGAATTTCGGCGGA
GAGTTGATAGTGAAGGAGTTAGAAAGGTCCCAAGCCGATCCCTGCGTGTT
CCGGCGGAAAAATCTAGGGAAGGTCGTCGTCATCATTGTGGTCTACGTTG
ACGATCTACTAGTGCTGAGCGAAACGAAGCAGGACGAGCATCAGGCGCTG
GAAGACCTTCGATCCAGCTTCCCCATCAAGGATCTAGGGGAGATCTCGAA
CTACCTGGGATGCCACATTACTCGGGACCGCAAGGCCAGGACGGTGACGT
TCGATCAGCAGCATTACGCGCAGACGGTAACCGAGCGATTCGAAATTCGA
AAGACCAGCGTGATCCCTGTCCCTACGGGGAAATCACCACTTTCGAAGGC
AGACGGGCCGCAAAATGACGCTGAGATCGCAGAGATGCATGGCATCCCGT
ATCGCGAGGCAGTGGGGGCACTAATGTGGGTAGCCAACATGACTGGGCCT
GGCCTAGCTTACACCGCGCACATGCTTGCCAAGTTCGATGACAACCCCGG
GCCCGAGCATTGGAAGGCAGTAATGAAAGCGCTACAGTACCTGAAACGAA
CGGCGAGCCTAGGGGTAACATATGGAGGCGCGACGGAGGACATGAAGTTA
TCGGCATGGGTGGACGCCGATCATGCATCATGCCCTGATACGCGCCGTTC
GGTATCGGGGGGCGCGGTGATGCTCGGCGGAGGGGCAATCAGTTGGTTTT
CACGGGCGCAGAGAATAACCGCGCCAGCGACGTCCGAATCGGAGTACGTC
GCACTGGCGGAGATTGCAAACGAGCTACGTTTTCTTCGGCAGGTGAACGC
GTTTATAGTACTTCCAATCGACTACAACATCCGTGTTCACGAGGACAACG
AGGGTGCTATCAAGATGTCAGAGAATAGGTTTAGCAGTCGACGAACAAGA
CACATCGACGTGAAGCATGATATGGTTCGCGATACCGTCGATGGGGGAAT
AGTCCGTGTAGAATACAGTATGTCAAATCGAGAGAACAGCATGCGGACGT
ACTAAATGGCGTTTCTCGAGGCGGATATTACGGAGGAGCTCTACGTTGAG
CTCCCCGACGGGTATCGTGACTCGCCGAACCAGGTTGGACGACTACAGAA
GACCATGTACGGCCTGATGCACGCCGGACTGCTGTGGCCGAAGAATTTCG
GCGGAGAGTTGATAGTGAAGGAGTTAGAAAGGTCCCAAGCCGATCCCTGC
GTGTTCCGGCGGAAAAATCTAGGGAAGGTCGTCGTCATCATTGTGGTCTA
CGTTGACGATCTACTAGTGCTGAGCGAAACGAAGCAGGACGAGCATCAGG
CGCTGGAAGACCTTCGATCCAGCTTCCCCATCAAGGATCTAGGGGAGATC
TCGAACTACCTGGGATGCCACATTACTCGGGACCGCAAGGCCAGGACGGT
GACGTTCGATCAGCAGCATTACGCGCAGACGGTAACCGAGCGATTCGAAA
TTCGAAAGACCAGCGTGATCCCTGTCCCTACGGGGAAATCACCACTTTCG
AAGGCAGACGGGCCGCAAAATGACGCTGAGATCGCAGAGATGCATGGCAT
CCCGTATCGCGAGGCAGTGGGGGCACTAATGTGGGTAGCCAACATGACTG
GGCCTGGCCTAGCTTACACCGCGCACATGCTTGCCAAGTTCGATGACAAC
CCCGGGCCCGAGCATTGGAAGGCAGTAATGAAAGCGCTACAGTACCTGAA
ACGAACGGCGAGCCTAGGGGTAACATATGGAGGCGCGACGGAGGACATGA
AGTTATCGGCATGGGTGGACGCCGATCATGCATCATGCCCTGATACGCGC
CGTTCGGTATCGGGGGGCGCGGTGATGCTCGGCGGAGGGGCAATCAGTTG
GTTTTCACGGGCGCAGAGAATAACCGCGCCAGCGACGTCCGAATCGGAGT
ACGTCGCACTGGCGGAGATTGCAAACGAGCTACGTTTTCTTCGGCAGGTG
AACGCGTTTATAGTACTTCCAATCGACTACAACATCCGTGTTCACGAGGA
CAACGAGGGTGCTATCAAGATGTCAGAGAATAGGTTTAGCAGTCGACGAA
CAAGACACATCGACGTGAAGCATGATATGGTTCGCGATACCGTCGATGGG
GGAATAGTCCGTGTAGAATACAGTATGTCAAATCGAGAGAACAGCATGCG
GACGTACTAA
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