mRNA_F-distichus_contig10176.143.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10176.143.1 vs. uniprot
Match: D7FU84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU84_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 1.410e-21 Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 2
Query: 71 MSTAHDMRSSIDVLHEISIILDTGLDRKTLSILVELIESGVNPEALAVVVKELRREAAALNSRR 262
M A DMR SIDVLHEIS ILDTGLDRKTLS+L+ELIESGVNPEALA VVKELRREAA L+ +R
Sbjct: 1 MPGARDMRDSIDVLHEISTILDTGLDRKTLSLLLELIESGVNPEALAAVVKELRREAATLSRQR 64
BLAST of mRNA_F-distichus_contig10176.143.1 vs. uniprot
Match: A0A0L0H5X0_SPIPD (Mitotic-spindle organizing protein 1 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H5X0_SPIPD) HSP 1 Score: 72.4 bits (176), Expect = 1.050e-12 Identity = 37/59 (62.71%), Postives = 47/59 (79.66%), Query Frame = 2
Query: 74 STAHDMRSSIDVLHEISIILDTGLDRKTLSILVELIESGVNPEALAVVVKELRREAAAL 250
S + R ++D+LHEIS IL+T LDR+TLS+ V L ESGVNPEALA V+KEL+RE+ AL
Sbjct: 3 SKLQEARETMDILHEISRILNTSLDRETLSLCVSLCESGVNPEALAAVIKELKRESRAL 61
BLAST of mRNA_F-distichus_contig10176.143.1 vs. uniprot
Match: A0A0D2X146_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X146_CAPO3) HSP 1 Score: 72.0 bits (175), Expect = 1.370e-12 Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 2
Query: 71 MSTAH--DMRSSIDVLHEISIILDTGLDRKTLSILVELIESGVNPEALAVVVKELRREAAALNSR 259
M TA + + ++DVL E+S +LDTGLDR+TL+I V L ESGVNPEALA VVKELRRE+ A++ R
Sbjct: 1 MDTAQVREAKETMDVLFEMSKLLDTGLDRETLAICVSLCESGVNPEALAAVVKELRRESRAVSER 65
BLAST of mRNA_F-distichus_contig10176.143.1 vs. uniprot
Match: C1FII7_MICCC (Uncharacterized protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FII7_MICCC) HSP 1 Score: 72.0 bits (175), Expect = 1.480e-12 Identity = 35/58 (60.34%), Postives = 48/58 (82.76%), Query Frame = 2
Query: 83 HDMRSSIDVLHEISIILDTGLDRKTLSILVELIESGVNPEALAVVVKELRREAAALNS 256
+ + ++D+ HEIS +LD GLD+++L+IL+ L E+GVNPEALA VVKELRREAAAL +
Sbjct: 9 YQAKETLDIAHEISKLLDCGLDKESLAILIALCENGVNPEALAAVVKELRREAAALQA 66
BLAST of mRNA_F-distichus_contig10176.143.1 vs. uniprot
Match: A0A388L457_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L457_CHABU) HSP 1 Score: 72.4 bits (176), Expect = 1.770e-12 Identity = 37/55 (67.27%), Postives = 46/55 (83.64%), Query Frame = 2
Query: 92 RSSIDVLHEISIILDTGLDRKTLSILVELIESGVNPEALAVVVKELRREAAALNS 256
R ++D+ +EIS +L+TGLDR LSIL+ L E+GVNPEALA VVKELRREAAAL +
Sbjct: 10 RETLDIAYEISKVLNTGLDRDMLSILISLCENGVNPEALAAVVKELRREAAALQA 64
BLAST of mRNA_F-distichus_contig10176.143.1 vs. uniprot
Match: A0A2V0NS68_9CHLO (Mitotic-spindle organizing protein-like n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NS68_9CHLO) HSP 1 Score: 72.0 bits (175), Expect = 1.830e-12 Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 2
Query: 98 SIDVLHEISIILDTGLDRKTLSILVELIESGVNPEALAVVVKELRREAAALNS 256
+ID LH+IS ILDTGLD++TL ILV L E+GVNPEALA VVKELRREAA L +
Sbjct: 11 AIDTLHQISNILDTGLDKETLRILVGLCEAGVNPEALAHVVKELRREAALLRA 63
BLAST of mRNA_F-distichus_contig10176.143.1 vs. uniprot
Match: A0A1J9PR54_9EURO (Mitotic-spindle organizing protein 1 n=1 Tax=Emergomyces pasteurianus Ep9510 TaxID=1447872 RepID=A0A1J9PR54_9EURO) HSP 1 Score: 71.6 bits (174), Expect = 2.520e-12 Identity = 38/52 (73.08%), Postives = 43/52 (82.69%), Query Frame = 2
Query: 92 RSSIDVLHEISIILDTGLDRKTLSILVELIESGVNPEALAVVVKELRREAAA 247
R ID+LHEIS IL+T LDR LS+ V LIE+GVNPEALA V+KELRREAAA
Sbjct: 17 REVIDILHEISTILNTHLDRTELSLCVSLIENGVNPEALAAVIKELRREAAA 68
BLAST of mRNA_F-distichus_contig10176.143.1 vs. uniprot
Match: A0A1B7P7B1_9EURO (Mitotic-spindle organizing protein 1 n=1 Tax=Emergomyces africanus TaxID=1955775 RepID=A0A1B7P7B1_9EURO) HSP 1 Score: 71.6 bits (174), Expect = 2.880e-12 Identity = 38/52 (73.08%), Postives = 43/52 (82.69%), Query Frame = 2
Query: 92 RSSIDVLHEISIILDTGLDRKTLSILVELIESGVNPEALAVVVKELRREAAA 247
R ID+LHEIS IL+T LDR LS+ V LIE+GVNPEALA V+KELRREAAA
Sbjct: 21 REVIDILHEISTILNTHLDRTELSLCVSLIENGVNPEALAAVIKELRREAAA 72
BLAST of mRNA_F-distichus_contig10176.143.1 vs. uniprot
Match: MZT1_PICSI (Mitotic-spindle organizing protein 1 n=1 Tax=Picea sitchensis TaxID=3332 RepID=MZT1_PICSI) HSP 1 Score: 71.2 bits (173), Expect = 2.900e-12 Identity = 39/60 (65.00%), Postives = 45/60 (75.00%), Query Frame = 2
Query: 74 STAHDMRSSIDVLHEISIILDTGLDRKTLSILVELIESGVNPEALAVVVKELRREAAALN 253
+ A + R S+D+ IS L TGLDR TLSIL+ L E GVNPEALA VVKELRREAAAL+
Sbjct: 4 TAAQNARESLDLAFSISNFLQTGLDRHTLSILIALCEHGVNPEALAAVVKELRREAAALH 63
BLAST of mRNA_F-distichus_contig10176.143.1 vs. uniprot
Match: A0A0M0JFJ5_9EUKA (Mitotic-spindle organizing protein 1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JFJ5_9EUKA) HSP 1 Score: 72.4 bits (176), Expect = 3.070e-12 Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 2
Query: 71 MSTAHDMRSSIDVLHEISIILDTGLDRKTLSILVELIESGVNPEALAVVVKELRREAAALNS 256
M+ ++DVL++IS +L TGLDR+TL++LV L ESGVNPEALA V+KELRRE AAL +
Sbjct: 1 MAAERPREETLDVLYDISQLLQTGLDRETLAVLVGLTESGVNPEALAAVIKELRRETAALRA 62 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10176.143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10176.143.1 >prot_F-distichus_contig10176.143.1 ID=prot_F-distichus_contig10176.143.1|Name=mRNA_F-distichus_contig10176.143.1|organism=Fucus distichus monoicous|type=polypeptide|length=65bp MSTAHDMRSSIDVLHEISIILDTGLDRKTLSILVELIESGVNPEALAVVVback to top mRNA from alignment at F-distichus_contig10176:3538..8541- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10176.143.1 ID=mRNA_F-distichus_contig10176.143.1|Name=mRNA_F-distichus_contig10176.143.1|organism=Fucus distichus monoicous|type=mRNA|length=5004bp|location=Sequence derived from alignment at F-distichus_contig10176:3538..8541- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10176:3538..8541- >mRNA_F-distichus_contig10176.143.1 ID=mRNA_F-distichus_contig10176.143.1|Name=mRNA_F-distichus_contig10176.143.1|organism=Fucus distichus monoicous|type=CDS|length=390bp|location=Sequence derived from alignment at F-distichus_contig10176:3538..8541- (Fucus distichus monoicous)back to top |