mRNA_F-distichus_contig101621.136.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig101621.136.1 vs. uniprot
Match: A0A0K2TJY1_LEPSM (PH domain-containing protein (Fragment) n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2TJY1_LEPSM) HSP 1 Score: 140 bits (352), Expect = 1.760e-39 Identity = 59/95 (62.11%), Postives = 80/95 (84.21%), Query Frame = 1
Query: 7 AVEKGLLWHQKDKLFSRWKERFFIPTKDYCHCFKKDSSKLTEMGEFLFKVKLVDTDGFSLLDERGYLTICINQLRDGRLYLRKHGGIRDWFNTIQ 291
+++GLLW Q+DK FSRWKERFFI TKDY +CF+K SSKLTEMG F+FK+KL D + LLD+RGYLTICIN +++G++YLR+ GI++WF+++Q
Sbjct: 23 VLQRGLLWQQRDKFFSRWKERFFILTKDYLNCFRKGSSKLTEMGGFIFKLKLTDIESVDLLDKRGYLTICINIVKEGKIYLRRPEGIKEWFHSLQ 117
BLAST of mRNA_F-distichus_contig101621.136.1 vs. uniprot
Match: UPI000C78B008 (uncharacterized protein LOC111701003 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C78B008) HSP 1 Score: 138 bits (347), Expect = 3.960e-39 Identity = 58/96 (60.42%), Postives = 79/96 (82.29%), Query Frame = 1
Query: 4 QAVEKGLLWHQKDKLFSRWKERFFIPTKDYCHCFKKDSSKLTEMGEFLFKVKLVDTDGFSLLDERGYLTICINQLRDGRLYLRKHGGIRDWFNTIQ 291
QAV KG+LW Q+D+LFSRWKER+ + T+DY HCFK+ +++ +EMG+F+FKVKLV +G +L+D+RGYLT+C+ LR+GR+YLR GIRDWF IQ
Sbjct: 70 QAVRKGVLWQQRDRLFSRWKERYIVLTRDYLHCFKRVTNRSSEMGDFIFKVKLVQLEGVTLIDKRGYLTVCLCILREGRIYLRSAHGIRDWFQAIQ 165
BLAST of mRNA_F-distichus_contig101621.136.1 vs. uniprot
Match: A0A553P267_TIGCA (PH domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P267_TIGCA) HSP 1 Score: 143 bits (360), Expect = 6.090e-38 Identity = 61/93 (65.59%), Postives = 79/93 (84.95%), Query Frame = 1
Query: 16 KGLLWHQKDKLFSRWKERFFIPTKDYCHCFKKDSSKLTEMGEFLFKVKLVDTDGFSLLDERGYLTICINQLRDGRLYLRKHGGIRDWFNTIQV 294
KGLLW Q+DKLFSRWKER+FI TKDY HCFKK SS++TEMG F+FK+KL+D D LLD+RGYLTICI+ L++G++YLR+ GI++W+ T+Q
Sbjct: 100 KGLLWQQRDKLFSRWKERYFILTKDYFHCFKKGSSRMTEMGGFIFKLKLLDIDSVDLLDKRGYLTICISLLKEGKIYLRRPEGIKEWYTTLQT 192
BLAST of mRNA_F-distichus_contig101621.136.1 vs. uniprot
Match: A0A0K2TR05_LEPSM (PH domain-containing protein (Fragment) n=3 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2TR05_LEPSM) HSP 1 Score: 136 bits (343), Expect = 1.480e-35 Identity = 58/97 (59.79%), Postives = 79/97 (81.44%), Query Frame = 1
Query: 1 KQAVEKGLLWHQKDKLFSRWKERFFIPTKDYCHCFKKDSSKLTEMGEFLFKVKLVDTDGFSLLDERGYLTICINQLRDGRLYLRKHGGIRDWFNTIQ 291
K ++KGLLW Q+DKLFSRWKER+FI T DY HCFK+ +S++TEMGEF+FK+K + + LLD+RGYLTICI+ RDG++YLRK GIR+W++ ++
Sbjct: 276 KSTLKKGLLWQQRDKLFSRWKERYFILTTDYLHCFKRRTSRITEMGEFIFKIKCGEVEDVELLDKRGYLTICISLPRDGKVYLRKTDGIREWYSLLK 372
BLAST of mRNA_F-distichus_contig101621.136.1 vs. uniprot
Match: A0A0K2VH57_LEPSM (PH domain-containing protein (Fragment) n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2VH57_LEPSM) HSP 1 Score: 129 bits (325), Expect = 2.650e-35 Identity = 53/95 (55.79%), Postives = 77/95 (81.05%), Query Frame = 1
Query: 7 AVEKGLLWHQKDKLFSRWKERFFIPTKDYCHCFKKDSSKLTEMGEFLFKVKLVDTDGFSLLDERGYLTICINQLRDGRLYLRKHGGIRDWFNTIQ 291
++KGLLW Q+DKLFSRWKERFFI TKDY CF++ SS+++EMG F+F++KL++ + ++D+RGYLTI ++ +DG++ LRK GIRDWFN ++
Sbjct: 52 TLKKGLLWQQRDKLFSRWKERFFILTKDYLQCFRRGSSRISEMGAFIFRIKLIEVEEVEIIDKRGYLTISLSMGKDGKVLLRKPDGIRDWFNILK 146
BLAST of mRNA_F-distichus_contig101621.136.1 vs. uniprot
Match: UPI001AE8ECB3 (uncharacterized protein LOC121130150 isoform X1 n=3 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE8ECB3) HSP 1 Score: 129 bits (325), Expect = 1.260e-33 Identity = 53/95 (55.79%), Postives = 77/95 (81.05%), Query Frame = 1
Query: 7 AVEKGLLWHQKDKLFSRWKERFFIPTKDYCHCFKKDSSKLTEMGEFLFKVKLVDTDGFSLLDERGYLTICINQLRDGRLYLRKHGGIRDWFNTIQ 291
++KGLLW Q+DKLFSRWKERFFI TKDY CF++ SS+++EMG F+F++KL++ + ++D+RGYLTI ++ +DG++ LRK GIRDWFN ++
Sbjct: 158 TLKKGLLWQQRDKLFSRWKERFFILTKDYLQCFRRGSSRISEMGAFIFRIKLIEVEEVEIIDKRGYLTISLSMGKDGKVLLRKPDGIRDWFNILK 252
BLAST of mRNA_F-distichus_contig101621.136.1 vs. uniprot
Match: A0A553P4M6_TIGCA (PH domain-containing protein (Fragment) n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P4M6_TIGCA) HSP 1 Score: 125 bits (315), Expect = 2.660e-32 Identity = 54/95 (56.84%), Postives = 75/95 (78.95%), Query Frame = 1
Query: 7 AVEKGLLWHQKDKLFSRWKERFFIPTKDYCHCFKKDSSKLTEMGEFLFKVKLVDTDGFSLLDERGYLTICINQLRDGRLYLRKHGGIRDWFNTIQ 291
A+ KGLLW Q+DK+FSRWKERFFI T DY CFKK SS++TEMG F+FK+KL + + L+D++GYLT+ ++ ++GR+ LRK GIR+WF +I+
Sbjct: 83 ALRKGLLWQQRDKIFSRWKERFFILTPDYLQCFKKGSSRMTEMGGFIFKLKLAEIEEVELVDKKGYLTVALSFHKEGRMLLRKPEGIREWFQSIK 177
BLAST of mRNA_F-distichus_contig101621.136.1 vs. uniprot
Match: UPI001AE2FEAD (uncharacterized protein LOC121130089 isoform X1 n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE2FEAD) HSP 1 Score: 127 bits (320), Expect = 3.480e-32 Identity = 56/98 (57.14%), Postives = 80/98 (81.63%), Query Frame = 1
Query: 1 KQAVEKGLLWHQKDKLFSRWKERFFIPTKDYCHCFKKDS-SKLTEMGEFLFKVKLVDTDGFSLLDERGYLTICINQLRDGRLYLRKHGGIRDWFNTIQ 291
K ++KGLLW QKDK+FSRWKERFFI TKDY CFKK++ S+L+EMG F+FK+KL + + L+D++GYLT+C++ +DG++ LRK+ GIRDWF+ ++
Sbjct: 398 KTTLKKGLLWQQKDKIFSRWKERFFILTKDYLQCFKKETNSRLSEMGGFIFKLKLSEVELVELVDKKGYLTVCLSLPKDGKVLLRKNEGIRDWFSLLK 495
BLAST of mRNA_F-distichus_contig101621.136.1 vs. uniprot
Match: A0A553P4Y8_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P4Y8_TIGCA) HSP 1 Score: 124 bits (312), Expect = 3.850e-31 Identity = 54/96 (56.25%), Postives = 75/96 (78.12%), Query Frame = 1
Query: 7 AVEKGLLWHQKDKLFSRWKERFFIPTKDYCHCFKKDSSKLTEMGEFLFKVKLVDTDGFSLLDERGYLTICINQLRDGRLYLRKHGGIRDWFNTIQV 294
+ KGL+W Q+DK+FSRWKERFFI T+DY CFKK SS++TEMG F+FK+KL D + LLD++GYLT+ + ++G++ LRK GIR+WF T++V
Sbjct: 285 TICKGLMWQQRDKIFSRWKERFFILTQDYLQCFKKGSSRMTEMGGFIFKLKLSDVNEVELLDKKGYLTVSLLLNKEGKILLRKPEGIREWFATLKV 380
BLAST of mRNA_F-distichus_contig101621.136.1 vs. uniprot
Match: A0A553P4W5_TIGCA (PH domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P4W5_TIGCA) HSP 1 Score: 121 bits (303), Expect = 1.270e-30 Identity = 47/96 (48.96%), Postives = 74/96 (77.08%), Query Frame = 1
Query: 7 AVEKGLLWHQKDKLFSRWKERFFIPTKDYCHCFKKDSSKLTEMGEFLFKVKLVDTDGFSLLDERGYLTICINQLRDGRLYLRKHGGIRDWFNTIQV 294
++KGL+W Q+D+LFSRWKER+F+ +KDY C+K+ SS+++EMG F+FK+KL + + LLD+RGYLT+ + ++G++ LRK GIR+WF ++
Sbjct: 34 CIKKGLMWQQRDRLFSRWKERYFVLSKDYLQCYKRGSSRISEMGGFIFKIKLAEIEDVELLDKRGYLTVSLTVAKEGKVLLRKPEGIREWFEALKT 129 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101621.136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig101621.136.1 >prot_F-distichus_contig101621.136.1 ID=prot_F-distichus_contig101621.136.1|Name=mRNA_F-distichus_contig101621.136.1|organism=Fucus distichus monoicous|type=polypeptide|length=100bp KQAVEKGLLWHQKDKLFSRWKERFFIPTKDYCHCFKKDSSKLTEMGEFLFback to top mRNA from alignment at F-distichus_contig101621:1121..1545+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig101621.136.1 ID=mRNA_F-distichus_contig101621.136.1|Name=mRNA_F-distichus_contig101621.136.1|organism=Fucus distichus monoicous|type=mRNA|length=425bp|location=Sequence derived from alignment at F-distichus_contig101621:1121..1545+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig101621:1121..1545+ >mRNA_F-distichus_contig101621.136.1 ID=mRNA_F-distichus_contig101621.136.1|Name=mRNA_F-distichus_contig101621.136.1|organism=Fucus distichus monoicous|type=CDS|length=600bp|location=Sequence derived from alignment at F-distichus_contig101621:1121..1545+ (Fucus distichus monoicous)back to top |