mRNA_F-distichus_contig101618.133.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig101618.133.1 vs. uniprot
Match: D8LC24_ECTSI (Eukaryotic translation initiation factor 2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC24_ECTSI) HSP 1 Score: 222 bits (566), Expect = 6.350e-67 Identity = 104/125 (83.20%), Postives = 114/125 (91.20%), Query Frame = 1
Query: 34 QEASFRWSPDGRAVLCLTSTDVDATGKSYYGSTGLYLLHADGQFDCTITPAKEGTVQDVRWGPAGS-KGNKFVVIAGTMPALCTLYDIKGEPQFDFGSAHRNTISWSPHGRFLLLAGELEINGKM 405
QEASF+WSPDGRAVLCLTSTDVDATGKSYYGSTGL+L+HADGQFDC I PAKEGTVQDV+WGP GS KGNKFVVIAG+MP+ TLY+IKGEP F+FGSAHRNTISWSPHGRFLLLAG + G+M
Sbjct: 243 QEASFKWSPDGRAVLCLTSTDVDATGKSYYGSTGLFLMHADGQFDCAIAPAKEGTVQDVQWGPGGSNKGNKFVVIAGSMPSTSTLYNIKGEPTFEFGSAHRNTISWSPHGRFLLLAGLGNLAGEM 367
BLAST of mRNA_F-distichus_contig101618.133.1 vs. uniprot
Match: A0A7S2Y000_9STRA (Eukaryotic translation initiation factor 2A (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y000_9STRA) HSP 1 Score: 160 bits (405), Expect = 6.380e-46 Identity = 74/124 (59.68%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 34 QEASFRWSPDGRAVLCLTSTDVDATGKSYYGSTGLYLLHADGQFDCTITPAKEGTVQDVRWGPAGSKGNKFVVIAGTMPALCTLYDIKGEPQFDFGSAHRNTISWSPHGRFLLLAGELEINGKM 405
Q+ +W P G+AVL +T TDVD+T +SYYGSTGLY+L ADG+FDC + +KEG + DV+W P+G KG F V AGTMPA TLY+++ EP F+FG AHRN ISWSPHGRFL LAG + G M
Sbjct: 66 QDVEVKWDPKGQAVLVMTHTDVDSTNQSYYGSTGLYMLRADGEFDCVVPQSKEGPIYDVQWNPSG-KG--FAVAAGTMPAQTTLYNLRCEPMFEFGEAHRNNISWSPHGRFLCLAGFGNLAGDM 186
BLAST of mRNA_F-distichus_contig101618.133.1 vs. uniprot
Match: A0A836C9Y7_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y7_9STRA) HSP 1 Score: 166 bits (419), Expect = 1.200e-45 Identity = 73/124 (58.87%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 34 QEASFRWSPDGRAVLCLTSTDVDATGKSYYGSTGLYLLHADGQFDCTITPAKEGTVQDVRWGPAGSKGNKFVVIAGTMPALCTLYDIKGEPQFDFGSAHRNTISWSPHGRFLLLAGELEINGKM 405
QE SFRW+PDG A++ + STD+DATG+SYYGS+G++LLH+DG DC I P KEG V DV+W PA S G +F V AGTMP LY KG+ F FG+AHRNT++WS HGRFL +AG + G+M
Sbjct: 256 QEISFRWAPDGSALVGVVSTDLDATGQSYYGSSGIFLLHSDGSHDCAIAPPKEGAVHDVQWAPASSAGRRFAVCAGTMPTQTALYSAKGDQVFMFGTAHRNTLAWSAHGRFLCIAGFGNLAGEM 379
BLAST of mRNA_F-distichus_contig101618.133.1 vs. uniprot
Match: A0A7S2WIX5_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WIX5_9STRA) HSP 1 Score: 162 bits (411), Expect = 5.500e-45 Identity = 75/124 (60.48%), Postives = 87/124 (70.16%), Query Frame = 1
Query: 34 QEASFRWSPDGRAVLCLTSTDVDATGKSYYGSTGLYLLHADGQFDCTITPAKEGTVQDVRWGPAGSKGNKFVVIAGTMPALCTLYDIKGEPQFDFGSAHRNTISWSPHGRFLLLAGELEINGKM 405
QEA F WS G AVLC T TDVD TG+SYYG + LYL+HADGQ+DC I PAKEG+ D W P +G FV I+G PA +Y+IKG+P FDFG AHRNTI WSPHGRFL L G ++G M
Sbjct: 247 QEAKFEWSSLGNAVLCKTDTDVDTTGQSYYGESALYLVHADGQYDCKILPAKEGSFHDFAWSP---QGRNFVAISGKSPASSIMYNIKGDPVFDFGQAHRNTIRWSPHGRFLCLGGFGNLSGDM 367
BLAST of mRNA_F-distichus_contig101618.133.1 vs. uniprot
Match: W7TR14_9STRA (Eukaryotic translation initiation factor 2A n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR14_9STRA) HSP 1 Score: 161 bits (407), Expect = 7.680e-44 Identity = 75/124 (60.48%), Postives = 94/124 (75.81%), Query Frame = 1
Query: 34 QEASFRWSPDGRAVLCLTSTDVDATGKSYYGSTGLYLLHADGQFDCTITPAKEGTVQDVRWGPAGSKGNKFVVIAGTMPALCTLYDIKGEPQFDFGSAHRNTISWSPHGRFLLLAGELEINGKM 405
QEA RWSP+G AVL T TDVD +G SYYGSTGLYLLHADG+++ T+ KEG + D +W PAG +F+V+AG MPA TLY+IK EP F+FG AHRNT+S+SPHGRF++LAG + G+M
Sbjct: 260 QEAHLRWSPNGLAVLIHTHTDVDTSGVSYYGSTGLYLLHADGKYEVTVPLPKEGPISDAKWAPAGPA--QFIVLAGRMPAAATLYNIKAEPIFEFGQAHRNTVSFSPHGRFVVLAGFGNLAGEM 381
BLAST of mRNA_F-distichus_contig101618.133.1 vs. uniprot
Match: A0A7S2BVC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BVC3_9STRA) HSP 1 Score: 148 bits (374), Expect = 7.700e-44 Identity = 67/115 (58.26%), Postives = 80/115 (69.57%), Query Frame = 1
Query: 37 EASFRWSPDGRAVLCLTSTDVDATGKSYYGSTGLYLLHADGQFDCTITPAKEGTVQDVRWGPAGSKGNKFVVIAGTMPALCTLYDIKGEPQFDFGSAHRNTISWSPHGRFLLLAG 381
+ S +WSP G AVL T T VD TG SYYGSTGL+++HADGQF+C + EG + W P G +FVVIAG MPA TLYD+K P+F FG+ HR+ ISWSPHGRFL LAG
Sbjct: 1 DVSIKWSPAGSAVLVYTHTTVDTTGDSYYGSTGLHMVHADGQFECGVPMQAEGPISAAEWSP---NGRQFVVIAGRMPATATLYDMKARPEFSFGTGHRSVISWSPHGRFLCLAG 112
BLAST of mRNA_F-distichus_contig101618.133.1 vs. uniprot
Match: A0A024UG74_9STRA (Eukaryotic translation initiation factor 2A n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024UG74_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.020e-41 Identity = 78/135 (57.78%), Postives = 93/135 (68.89%), Query Frame = 1
Query: 1 SRPALKRLQILQEASFRWSPDGRAVLCLTSTDVDATGKSYYGSTGLYLLHADGQFDCTITPAKEGTVQDVRWGPAGSKGNKFVVIAGTMPALCTLYDIKGEPQFDFGSAHRNTISWSPHGRFLLLAGELEINGKM 405
S A K QE +WSP+G A++ TSTDVD +GKSYYG T L+ + +DGQ+DC+I KEGTV DV+W P SKG FVVIAG+MP+ TLYD K P F+FGSA RN ISWSPHGRFL LAG + G M
Sbjct: 228 SHVAFKSFYKAQEVKMKWSPNGSALIIETSTDVDTSGKSYYGETNLFFVQSDGQYDCSIPLTKEGTVHDVQWDPT-SKG--FVVIAGSMPSNATLYDNKACPVFEFGSAWRNVISWSPHGRFLCLAGFGNLPGNM 359
BLAST of mRNA_F-distichus_contig101618.133.1 vs. uniprot
Match: A0A485KMC5_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KMC5_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.870e-41 Identity = 77/132 (58.33%), Postives = 91/132 (68.94%), Query Frame = 1
Query: 10 ALKRLQILQEASFRWSPDGRAVLCLTSTDVDATGKSYYGSTGLYLLHADGQFDCTITPAKEGTVQDVRWGPAGSKGNKFVVIAGTMPALCTLYDIKGEPQFDFGSAHRNTISWSPHGRFLLLAGELEINGKM 405
A K QE +WSP+G A++ TSTDVD +GKSYYG T L+ + +DGQ+DC+I KEGTV DV+W P SKG FVVIAG MP+ TLYD K P F+FGSA RN ISWSPHGRFL LAG + G M
Sbjct: 225 AFKSFYKAQEVKMKWSPNGNALIIETSTDVDTSGKSYYGETNLFFVQSDGQYDCSIPLTKEGTVHDVQWDPT-SKG--FVVIAGAMPSNATLYDNKACPVFEFGSAWRNVISWSPHGRFLCLAGFGNLPGNM 353
BLAST of mRNA_F-distichus_contig101618.133.1 vs. uniprot
Match: A0A6G0X7T5_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X7T5_9STRA) HSP 1 Score: 153 bits (386), Expect = 4.850e-41 Identity = 77/135 (57.04%), Postives = 91/135 (67.41%), Query Frame = 1
Query: 1 SRPALKRLQILQEASFRWSPDGRAVLCLTSTDVDATGKSYYGSTGLYLLHADGQFDCTITPAKEGTVQDVRWGPAGSKGNKFVVIAGTMPALCTLYDIKGEPQFDFGSAHRNTISWSPHGRFLLLAGELEINGKM 405
S A K QE +WSP+G A++ TSTDVD +GKSYYG T L+ + +DGQ+DC+I KEG V DV+W P SKG FVVIAG MP+ TLYD K P F+FGSA RN ISWSPHGRFL LAG + G M
Sbjct: 225 SHVAFKSFYKAQEVKMKWSPNGNALIIETSTDVDTSGKSYYGETNLFFVQSDGQYDCSIPLTKEGAVHDVQWDPT-SKG--FVVIAGAMPSNATLYDNKACPVFEFGSAWRNVISWSPHGRFLCLAGFGNLPGNM 356
BLAST of mRNA_F-distichus_contig101618.133.1 vs. uniprot
Match: A0A1V9Z8A3_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z8A3_9STRA) HSP 1 Score: 152 bits (385), Expect = 6.400e-41 Identity = 75/135 (55.56%), Postives = 94/135 (69.63%), Query Frame = 1
Query: 1 SRPALKRLQILQEASFRWSPDGRAVLCLTSTDVDATGKSYYGSTGLYLLHADGQFDCTITPAKEGTVQDVRWGPAGSKGNKFVVIAGTMPALCTLYDIKGEPQFDFGSAHRNTISWSPHGRFLLLAGELEINGKM 405
S A K Q+ +W+P+G A++ TSTDVD +GKSYYG T L+ L +DGQ+DC+I K+G V DV+W PA S+G FVV+AG+MPA TLYD K P F+FG+A RNTISWSPHGRFL LAG + G M
Sbjct: 218 SHVAFKSFYKAQDVKLKWAPNGSALIIETSTDVDTSGKSYYGETNLFFLQSDGQYDCSIPVTKQGPVHDVQWDPA-SRG--FVVLAGSMPANATLYDNKACPTFEFGAASRNTISWSPHGRFLCLAGFGNLPGHM 349 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101618.133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig101618.133.1 >prot_F-distichus_contig101618.133.1 ID=prot_F-distichus_contig101618.133.1|Name=mRNA_F-distichus_contig101618.133.1|organism=Fucus distichus monoicous|type=polypeptide|length=135bp SRPALKRLQILQEASFRWSPDGRAVLCLTSTDVDATGKSYYGSTGLYLLHback to top mRNA from alignment at F-distichus_contig101618:131..1017+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig101618.133.1 ID=mRNA_F-distichus_contig101618.133.1|Name=mRNA_F-distichus_contig101618.133.1|organism=Fucus distichus monoicous|type=mRNA|length=887bp|location=Sequence derived from alignment at F-distichus_contig101618:131..1017+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig101618:131..1017+ >mRNA_F-distichus_contig101618.133.1 ID=mRNA_F-distichus_contig101618.133.1|Name=mRNA_F-distichus_contig101618.133.1|organism=Fucus distichus monoicous|type=CDS|length=810bp|location=Sequence derived from alignment at F-distichus_contig101618:131..1017+ (Fucus distichus monoicous)back to top |