mRNA_F-distichus_contig101606.131.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig101606.131.1
Unique NamemRNA_F-distichus_contig101606.131.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101606.131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101606contigF-distichus_contig101606:238..1157 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size409
Cds size408
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101606.131.1prot_F-distichus_contig101606.131.1Fucus distichus monoicouspolypeptideF-distichus_contig101606 239..1157 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928931.9713106-CDS-F-distichus_contig101606:238..3701622928931.9713106-CDS-F-distichus_contig101606:238..370Fucus distichus monoicousCDSF-distichus_contig101606 239..370 -
1690885071.8979912-CDS-F-distichus_contig101606:238..3701690885071.8979912-CDS-F-distichus_contig101606:238..370Fucus distichus monoicousCDSF-distichus_contig101606 239..370 -
1622928931.9836411-CDS-F-distichus_contig101606:659..8871622928931.9836411-CDS-F-distichus_contig101606:659..887Fucus distichus monoicousCDSF-distichus_contig101606 660..887 -
1690885071.9073336-CDS-F-distichus_contig101606:659..8871690885071.9073336-CDS-F-distichus_contig101606:659..887Fucus distichus monoicousCDSF-distichus_contig101606 660..887 -
1622928932.000473-CDS-F-distichus_contig101606:1109..11571622928932.000473-CDS-F-distichus_contig101606:1109..1157Fucus distichus monoicousCDSF-distichus_contig101606 1110..1157 -
1690885071.9188793-CDS-F-distichus_contig101606:1109..11571690885071.9188793-CDS-F-distichus_contig101606:1109..1157Fucus distichus monoicousCDSF-distichus_contig101606 1110..1157 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig101606.131.1

>prot_F-distichus_contig101606.131.1 ID=prot_F-distichus_contig101606.131.1|Name=mRNA_F-distichus_contig101606.131.1|organism=Fucus distichus monoicous|type=polypeptide|length=136bp
DLVKTFEQGEREIMMQTMLTKLRSERSKTEESAAEVERKFKEASTVVCTA
QAAVVSLRSQLELAKRDHTAEKRILVALKQTDEEKSAAEASQASKRVAEA
EAALTTASNSLDEAREENEALRDELERARQQERVAT
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mRNA from alignment at F-distichus_contig101606:238..1157-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig101606.131.1 ID=mRNA_F-distichus_contig101606.131.1|Name=mRNA_F-distichus_contig101606.131.1|organism=Fucus distichus monoicous|type=mRNA|length=920bp|location=Sequence derived from alignment at F-distichus_contig101606:238..1157- (Fucus distichus monoicous)
GATCTCGTGAAGACCTTTGAGCAAGGGGAACGAGAGATCATGATGCAGGT
TGTTGCAATAACATTCCTGGAACTCGTCTCATACCATCTAAAACATTCCG
CGGTCATCATATCTTCTCATGTGAAAGAAACGTACGGTGCGAGCGCAAAT
CGGATTAGAGCCAGACGGATACCAGTGAACTTGACAACATCGGTGCCAGT
TTAGCGAGAAACAACAATTAGCTCGGAGCATTATTGTATGGTGTCTGCTT
GTTTTGTTCCTTTTTGACAGACGATGCTCACAAAACTTCGGAGCGAGAGG
TCGAAGACTGAAGAAAGCGCGGCCGAGGTTGAACGCAAGTTTAAGGAGGC
TTCTACCGTTGTTTGTACTGCACAAGCAGCGGTGGTCTCTCTACGCTCTC
AGCTGGAGCTCGCAAAACGCGACCACACCGCCGAAAAGCGTATTCTAGTA
GCGCTGAAACAGACAGATGAGGAGAAGTCAGCAGCCGAAGCATCTCAGGT
GAGTTACCTTGATCGATCAGCACGGGAGCTAATTCTGAGAACTTTGCTAC
CCGTCCGTGGGAAAATCATCCACGTTCGCTTCCTTAAAGAACAAGAAAAA
GTTTTATAACACGACGTTTGCTTGCGGAGAGGTCGACGGCACGATAGGAT
GCATCGTATCTATAGTTGACCGTTGGGGCAAGTGGCTTTGCTCTACTCCT
TATCCTTCCCCCTTCGACCTCGGAGGAGAACGGTGGATGCCCTCGCCCCC
CTTTCCCTCCCCCCCTTCGTATGTTTTGAGGGTTCAGGCCAGCAAACGTG
TGGCGGAGGCCGAAGCGGCGCTTACTACCGCAAGCAATAGTCTAGACGAA
GCCAGGGAAGAAAACGAGGCTCTTCGCGACGAGCTTGAGCGCGCTCGCCA
GCAGGAGAGAGTAGCAACCG
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Coding sequence (CDS) from alignment at F-distichus_contig101606:238..1157-

>mRNA_F-distichus_contig101606.131.1 ID=mRNA_F-distichus_contig101606.131.1|Name=mRNA_F-distichus_contig101606.131.1|organism=Fucus distichus monoicous|type=CDS|length=816bp|location=Sequence derived from alignment at F-distichus_contig101606:238..1157- (Fucus distichus monoicous)
GATCTCGTGAAGACCTTTGAGCAAGGGGAACGAGAGATCATGATGCAGGA
TCTCGTGAAGACCTTTGAGCAAGGGGAACGAGAGATCATGATGCAGACGA
TGCTCACAAAACTTCGGAGCGAGAGGTCGAAGACTGAAGAAAGCGCGGCC
GAGGTTGAACGCAAGTTTAAGGAGGCTTCTACCGTTGTTTGTACTGCACA
AGCAGCGGTGGTCTCTCTACGCTCTCAGCTGGAGCTCGCAAAACGCGACC
ACACCGCCGAAAAGCGTATTCTAGTAGCGCTGAAACAGACAGATGAGGAG
AAGTCAGCAGCCGAAGCATCTCAGACGATGCTCACAAAACTTCGGAGCGA
GAGGTCGAAGACTGAAGAAAGCGCGGCCGAGGTTGAACGCAAGTTTAAGG
AGGCTTCTACCGTTGTTTGTACTGCACAAGCAGCGGTGGTCTCTCTACGC
TCTCAGCTGGAGCTCGCAAAACGCGACCACACCGCCGAAAAGCGTATTCT
AGTAGCGCTGAAACAGACAGATGAGGAGAAGTCAGCAGCCGAAGCATCTC
AGGCCAGCAAACGTGTGGCGGAGGCCGAAGCGGCGCTTACTACCGCAAGC
AATAGTCTAGACGAAGCCAGGGAAGAAAACGAGGCTCTTCGCGACGAGCT
TGAGCGCGCTCGCCAGCAGGAGAGAGTAGCAACCGCCAGCAAACGTGTGG
CGGAGGCCGAAGCGGCGCTTACTACCGCAAGCAATAGTCTAGACGAAGCC
AGGGAAGAAAACGAGGCTCTTCGCGACGAGCTTGAGCGCGCTCGCCAGCA
GGAGAGAGTAGCAACC
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