mRNA_F-distichus_contig10160.130.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10160.130.1 vs. uniprot
Match: D8LBX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX8_ECTSI) HSP 1 Score: 325 bits (834), Expect = 8.670e-108 Identity = 157/194 (80.93%), Postives = 179/194 (92.27%), Query Frame = 1
Query: 157 DKEPTFMFPVNDLEVTISPRGRPFRPPLLARGSATPFIATAYDEFTRDWVALSIGRLAQKAVTCVKYGAEEPPQYPADDDRVPGKQEAFTIGTDQAEEEPGTKEVRVLHYYRPEYQGPRSSYRRTPDMKRQLLLLDRPAHFLWMEVAAKALTFKAGELEPVFCSLTLYKIVSRQGKKGAEVDLSRSGRVSETFW 738
DKEPTF+FPVNDLEV+I+PRGRPF+PP LARGSAT F+ATAYDEFTRDWV LSIGRL+QK+V CVKY +EEPPQYPADD +VP K E FT+GTD EE+PG+KEVRVLHYYRP+Y+GPRS+YR+TPD+K QLLLLDRPAHF+WME+AA+ALTFK G LEPVFCSLTLY+IVSR GKKGAE+DLSRSGRVSETFW
Sbjct: 7 DKEPTFIFPVNDLEVSIAPRGRPFQPPPLARGSATTFLATAYDEFTRDWVNLSIGRLSQKSVPCVKYRSEEPPQYPADDHQVPDK-EKFTVGTDDPEEQPGSKEVRVLHYYRPQYKGPRSTYRKTPDLKLQLLLLDRPAHFMWMEIAAQALTFKVGALEPVFCSLTLYRIVSRLGKKGAEMDLSRSGRVSETFW 199
BLAST of mRNA_F-distichus_contig10160.130.1 vs. uniprot
Match: D8LBX9_ECTSI (Similar to dedicator of cytokinesis n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX9_ECTSI) HSP 1 Score: 254 bits (649), Expect = 3.740e-71 Identity = 136/204 (66.67%), Postives = 152/204 (74.51%), Query Frame = 1
Query: 715 GRVSETFWFDLNSGNTRRKFAHVFTRESPSGNPDDIATPPIILTGSSTRSTANI------GVGSSSRKRGSAQERNVTGCRRALFALDPKNADGRLFLILQLSKVLQGEPEKVSWDEGMREGGASAILQLINRWLNSTLLAGGRNKYNADSAAEEAAQRLWRYRQPLAFGVYQVAPSGRIQGGEDVVMSLYRQNDGLSEEGLMR 1308
G E F FDLNS RRKF++VFTRESP+G PDDIATP I +TGSSTR+T G G SR+RG+ ERNVTGCRRALFALDPKNADGRLFL+LQLSKVLQGEPEKV + G GG ++ WL T + GR+K NAD+ EEAAQRLWRYRQPLAFGVYQ AP GR+ G E+V MSLYRQNDGLSEEGLMR
Sbjct: 40 GPKREHFRFDLNSSTVRRKFSYVFTRESPTGAPDDIATPSISVTGSSTRATTGASGSSGGGRGKGSRRRGTTVERNVTGCRRALFALDPKNADGRLFLVLQLSKVLQGEPEKVRDETGGEGGGRGGVVVFCMAWLFWTAYSKGRSKSNADAPEEEAAQRLWRYRQPLAFGVYQAAPEGRLLGVEEVSMSLYRQNDGLSEEGLMR 243
BLAST of mRNA_F-distichus_contig10160.130.1 vs. uniprot
Match: A0A836CP33_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP33_9STRA) HSP 1 Score: 148 bits (374), Expect = 4.350e-39 Identity = 85/192 (44.27%), Postives = 108/192 (56.25%), Query Frame = 1
Query: 172 FMFPVNDLEVTISPRGRPFRPPLLARGSATPFIATAYDEFTRDWVALSIGRLAQKAVTCVKYGAEEPPQYPAD----DDRVPGKQEAFTIGTDQAEEEPGTKEVRVLHYYRPEYQGPRSSYRRTPDMKRQLLLLDRPAHFLWMEVAAKALTFKAGELEPVFCSLTLYKIVSRQGKKGAEVDLSRSGRVSETF 735
F FP NDLE+ +SPR R P L+ TP + TA DEFTRD+ + +GR + V V PP+YP D + G +E GTD T EVR+L Y P Y G S+YR+ P + LL DRP+HF W++V L F GE EP+FCSLT+Y+I + KKG E+D SGRVSETF
Sbjct: 1 FTFPENDLEIEVSPRARSIGIPALSEAECTPQLVTALDEFTRDFRTVVVGRYSDALVPRVARTLLPPPRYPIDAVTGNGEAVGDEEEVPEGTDS-----DTPEVRLLQQYCPTYSGTPSTYRKLPPHDLRALLGDRPSHFTWLKVDCNKLVFGVGEPEPLFCSLTMYRIEGKPTKKGFELDRRNSGRVSETF 187 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10160.130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10160.130.1 >prot_F-distichus_contig10160.130.1 ID=prot_F-distichus_contig10160.130.1|Name=mRNA_F-distichus_contig10160.130.1|organism=Fucus distichus monoicous|type=polypeptide|length=436bp RTSRRCRPREKTAPPPAPSRAFRPEWAGRVRPRERPSVLAGVTTRRQASRback to top mRNA from alignment at F-distichus_contig10160:1616..9444- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10160.130.1 ID=mRNA_F-distichus_contig10160.130.1|Name=mRNA_F-distichus_contig10160.130.1|organism=Fucus distichus monoicous|type=mRNA|length=7829bp|location=Sequence derived from alignment at F-distichus_contig10160:1616..9444- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10160:1616..9444- >mRNA_F-distichus_contig10160.130.1 ID=mRNA_F-distichus_contig10160.130.1|Name=mRNA_F-distichus_contig10160.130.1|organism=Fucus distichus monoicous|type=CDS|length=2616bp|location=Sequence derived from alignment at F-distichus_contig10160:1616..9444- (Fucus distichus monoicous)back to top |