mRNA_F-distichus_contig10160.130.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10160.130.1
Unique NamemRNA_F-distichus_contig10160.130.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10160.130.1 vs. uniprot
Match: D8LBX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX8_ECTSI)

HSP 1 Score: 325 bits (834), Expect = 8.670e-108
Identity = 157/194 (80.93%), Postives = 179/194 (92.27%), Query Frame = 1
Query:  157 DKEPTFMFPVNDLEVTISPRGRPFRPPLLARGSATPFIATAYDEFTRDWVALSIGRLAQKAVTCVKYGAEEPPQYPADDDRVPGKQEAFTIGTDQAEEEPGTKEVRVLHYYRPEYQGPRSSYRRTPDMKRQLLLLDRPAHFLWMEVAAKALTFKAGELEPVFCSLTLYKIVSRQGKKGAEVDLSRSGRVSETFW 738
            DKEPTF+FPVNDLEV+I+PRGRPF+PP LARGSAT F+ATAYDEFTRDWV LSIGRL+QK+V CVKY +EEPPQYPADD +VP K E FT+GTD  EE+PG+KEVRVLHYYRP+Y+GPRS+YR+TPD+K QLLLLDRPAHF+WME+AA+ALTFK G LEPVFCSLTLY+IVSR GKKGAE+DLSRSGRVSETFW
Sbjct:    7 DKEPTFIFPVNDLEVSIAPRGRPFQPPPLARGSATTFLATAYDEFTRDWVNLSIGRLSQKSVPCVKYRSEEPPQYPADDHQVPDK-EKFTVGTDDPEEQPGSKEVRVLHYYRPQYKGPRSTYRKTPDLKLQLLLLDRPAHFMWMEIAAQALTFKVGALEPVFCSLTLYRIVSRLGKKGAEMDLSRSGRVSETFW 199          
BLAST of mRNA_F-distichus_contig10160.130.1 vs. uniprot
Match: D8LBX9_ECTSI (Similar to dedicator of cytokinesis n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX9_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 3.740e-71
Identity = 136/204 (66.67%), Postives = 152/204 (74.51%), Query Frame = 1
Query:  715 GRVSETFWFDLNSGNTRRKFAHVFTRESPSGNPDDIATPPIILTGSSTRSTANI------GVGSSSRKRGSAQERNVTGCRRALFALDPKNADGRLFLILQLSKVLQGEPEKVSWDEGMREGGASAILQLINRWLNSTLLAGGRNKYNADSAAEEAAQRLWRYRQPLAFGVYQVAPSGRIQGGEDVVMSLYRQNDGLSEEGLMR 1308
            G   E F FDLNS   RRKF++VFTRESP+G PDDIATP I +TGSSTR+T         G G  SR+RG+  ERNVTGCRRALFALDPKNADGRLFL+LQLSKVLQGEPEKV  + G   GG   ++     WL  T  + GR+K NAD+  EEAAQRLWRYRQPLAFGVYQ AP GR+ G E+V MSLYRQNDGLSEEGLMR
Sbjct:   40 GPKREHFRFDLNSSTVRRKFSYVFTRESPTGAPDDIATPSISVTGSSTRATTGASGSSGGGRGKGSRRRGTTVERNVTGCRRALFALDPKNADGRLFLVLQLSKVLQGEPEKVRDETGGEGGGRGGVVVFCMAWLFWTAYSKGRSKSNADAPEEEAAQRLWRYRQPLAFGVYQAAPEGRLLGVEEVSMSLYRQNDGLSEEGLMR 243          
BLAST of mRNA_F-distichus_contig10160.130.1 vs. uniprot
Match: A0A836CP33_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP33_9STRA)

HSP 1 Score: 148 bits (374), Expect = 4.350e-39
Identity = 85/192 (44.27%), Postives = 108/192 (56.25%), Query Frame = 1
Query:  172 FMFPVNDLEVTISPRGRPFRPPLLARGSATPFIATAYDEFTRDWVALSIGRLAQKAVTCVKYGAEEPPQYPAD----DDRVPGKQEAFTIGTDQAEEEPGTKEVRVLHYYRPEYQGPRSSYRRTPDMKRQLLLLDRPAHFLWMEVAAKALTFKAGELEPVFCSLTLYKIVSRQGKKGAEVDLSRSGRVSETF 735
            F FP NDLE+ +SPR R    P L+    TP + TA DEFTRD+  + +GR +   V  V      PP+YP D    +    G +E    GTD       T EVR+L  Y P Y G  S+YR+ P    + LL DRP+HF W++V    L F  GE EP+FCSLT+Y+I  +  KKG E+D   SGRVSETF
Sbjct:    1 FTFPENDLEIEVSPRARSIGIPALSEAECTPQLVTALDEFTRDFRTVVVGRYSDALVPRVARTLLPPPRYPIDAVTGNGEAVGDEEEVPEGTDS-----DTPEVRLLQQYCPTYSGTPSTYRKLPPHDLRALLGDRPSHFTWLKVDCNKLVFGVGEPEPLFCSLTMYRIEGKPTKKGFELDRRNSGRVSETF 187          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10160.130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBX8_ECTSI8.670e-10880.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LBX9_ECTSI3.740e-7166.67Similar to dedicator of cytokinesis n=1 Tax=Ectoca... [more]
A0A836CP33_9STRA4.350e-3944.27Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10160contigF-distichus_contig10160:1616..9444 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score258.5
Seed ortholog evalue5.8e-66
Seed eggNOG ortholog2880.D8LBX9
KEGG koko:K21853
Hectar predicted targeting categoryother localisation
EggNOG free text desc.memory T cell proliferation
EggNOG OGsKOG1997@1,KOG1997@2759
Ec32 ortholog descriptionSimilar to dedicator of cytokinesis
Ec32 orthologEc-20_003690.3
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons9
Model size1309
Cds size1308
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928931.7716107-CDS-F-distichus_contig10160:1615..17421622928931.7716107-CDS-F-distichus_contig10160:1615..1742Fucus distichus monoicousCDSF-distichus_contig10160 1616..1742 -
1690885071.8080785-CDS-F-distichus_contig10160:1615..17421690885071.8080785-CDS-F-distichus_contig10160:1615..1742Fucus distichus monoicousCDSF-distichus_contig10160 1616..1742 -
1622928931.7853756-CDS-F-distichus_contig10160:2492..25551622928931.7853756-CDS-F-distichus_contig10160:2492..2555Fucus distichus monoicousCDSF-distichus_contig10160 2493..2555 -
1690885071.8206463-CDS-F-distichus_contig10160:2492..25551690885071.8206463-CDS-F-distichus_contig10160:2492..2555Fucus distichus monoicousCDSF-distichus_contig10160 2493..2555 -
1622928931.8035302-CDS-F-distichus_contig10160:4446..44971622928931.8035302-CDS-F-distichus_contig10160:4446..4497Fucus distichus monoicousCDSF-distichus_contig10160 4447..4497 -
1690885071.8296876-CDS-F-distichus_contig10160:4446..44971690885071.8296876-CDS-F-distichus_contig10160:4446..4497Fucus distichus monoicousCDSF-distichus_contig10160 4447..4497 -
1622928931.821222-CDS-F-distichus_contig10160:5820..61501622928931.821222-CDS-F-distichus_contig10160:5820..6150Fucus distichus monoicousCDSF-distichus_contig10160 5821..6150 -
1690885071.8383753-CDS-F-distichus_contig10160:5820..61501690885071.8383753-CDS-F-distichus_contig10160:5820..6150Fucus distichus monoicousCDSF-distichus_contig10160 5821..6150 -
1622928931.840356-CDS-F-distichus_contig10160:6598..67691622928931.840356-CDS-F-distichus_contig10160:6598..6769Fucus distichus monoicousCDSF-distichus_contig10160 6599..6769 -
1690885071.847473-CDS-F-distichus_contig10160:6598..67691690885071.847473-CDS-F-distichus_contig10160:6598..6769Fucus distichus monoicousCDSF-distichus_contig10160 6599..6769 -
1622928931.8638554-CDS-F-distichus_contig10160:7202..73151622928931.8638554-CDS-F-distichus_contig10160:7202..7315Fucus distichus monoicousCDSF-distichus_contig10160 7203..7315 -
1690885071.8581688-CDS-F-distichus_contig10160:7202..73151690885071.8581688-CDS-F-distichus_contig10160:7202..7315Fucus distichus monoicousCDSF-distichus_contig10160 7203..7315 -
1622928931.8799777-CDS-F-distichus_contig10160:8204..83101622928931.8799777-CDS-F-distichus_contig10160:8204..8310Fucus distichus monoicousCDSF-distichus_contig10160 8205..8310 -
1690885071.8687127-CDS-F-distichus_contig10160:8204..83101690885071.8687127-CDS-F-distichus_contig10160:8204..8310Fucus distichus monoicousCDSF-distichus_contig10160 8205..8310 -
1622928931.895065-CDS-F-distichus_contig10160:8884..90751622928931.895065-CDS-F-distichus_contig10160:8884..9075Fucus distichus monoicousCDSF-distichus_contig10160 8885..9075 -
1690885071.8779202-CDS-F-distichus_contig10160:8884..90751690885071.8779202-CDS-F-distichus_contig10160:8884..9075Fucus distichus monoicousCDSF-distichus_contig10160 8885..9075 -
1622928931.9187188-CDS-F-distichus_contig10160:9288..94441622928931.9187188-CDS-F-distichus_contig10160:9288..9444Fucus distichus monoicousCDSF-distichus_contig10160 9289..9444 -
1690885071.8881643-CDS-F-distichus_contig10160:9288..94441690885071.8881643-CDS-F-distichus_contig10160:9288..9444Fucus distichus monoicousCDSF-distichus_contig10160 9289..9444 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10160.130.1prot_F-distichus_contig10160.130.1Fucus distichus monoicouspolypeptideF-distichus_contig10160 1616..9444 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10160.130.1

>prot_F-distichus_contig10160.130.1 ID=prot_F-distichus_contig10160.130.1|Name=mRNA_F-distichus_contig10160.130.1|organism=Fucus distichus monoicous|type=polypeptide|length=436bp
RTSRRCRPREKTAPPPAPSRAFRPEWAGRVRPRERPSVLAGVTTRRQASR
FDDKEPTFMFPVNDLEVTISPRGRPFRPPLLARGSATPFIATAYDEFTRD
WVALSIGRLAQKAVTCVKYGAEEPPQYPADDDRVPGKQEAFTIGTDQAEE
EPGTKEVRVLHYYRPEYQGPRSSYRRTPDMKRQLLLLDRPAHFLWMEVAA
KALTFKAGELEPVFCSLTLYKIVSRQGKKGAEVDLSRSGRVSETFWFDLN
SGNTRRKFAHVFTRESPSGNPDDIATPPIILTGSSTRSTANIGVGSSSRK
RGSAQERNVTGCRRALFALDPKNADGRLFLILQLSKVLQGEPEKVSWDEG
MREGGASAILQLINRWLNSTLLAGGRNKYNADSAAEEAAQRLWRYRQPLA
FGVYQVAPSGRIQGGEDVVMSLYRQNDGLSEEGLMR
back to top

mRNA from alignment at F-distichus_contig10160:1616..9444-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10160.130.1 ID=mRNA_F-distichus_contig10160.130.1|Name=mRNA_F-distichus_contig10160.130.1|organism=Fucus distichus monoicous|type=mRNA|length=7829bp|location=Sequence derived from alignment at F-distichus_contig10160:1616..9444- (Fucus distichus monoicous)
CGGACCAGCCGCCGCTGCCGCCCCCGGGAGAAAACAGCACCGCCACCGGC TCCCTCCCGGGCATTTCGACCAGAATGGGCAGGTCGAGTTCGACCACGAG AACGACCGTCAGTTCTGGCAGGAGTTACTACCCGAAGGCAAGCCAGCCGC TTTGACGTCGGGGAGCGCGAGCCTGCAGTGCAGTAGAGTTCATTAGAGGG GTAGGGTGGGCGCGCATTTTAGCGATGGTGCAGGCGAAGAACACCTCTTG TGAACGTACTTCTGCGATATACCGTTGTTGTAAAAGCGATTAGCGGGCGC CCCTCCCCACCCGTCTGCGAGCTTTTTATCATTTTATTTTCTTCTTGCCG TATGTTTCTGGTTCTTCAGGACAAGGAGCCCACTTTCATGTTTCCCGTGA ACGATCTGGAGGTGACAATCTCTCCTCGAGGACGACCGTTCCGCCCCCCC CTTCTCGCGCGGGGCTCGGCGACGCCGTTCATCGCCACGGCTTACGATGA GTTCACCCGAGACTGGGTCGCGCTGTCCATTGGACGGCTTGCGCAGAAGG CCGTCACGTGGTGAGTGCGTGTTCCCAGCGCCATCGCTAAATGATGGAAA CCCGGAGGCGTGCTTCGTATCTAAATCGATTAAACAGGTGGTGTCAGCGC TTTCATTCTCTATGGTGCACCTTGGTTCTATTTATATTTCTCATACTCGA AACTTGAAAAGTCGCGGTGGGAAAGGTTGGGACAAAAGGATTCTTTTATG GAACGGAACGGGACGGGACGGGACAGTATATCACTACAGTGCATGCTTTG GTGCTAGCCAGGAACCCGTACCTCCAGGGGGGAAAACGCCATGAGCCATG CAGCAACTTTGACCCGCGTTGCAAGAAACAAACTTGTAGTAGGGTGTCAC GATATTCTCTTAGCATACTCGTACAGGCTCTGCGCTCTATCGTCCACGTC GTCCCCATTGAATACGTGTCGTACAGACAGAGAGCATCAATGCTACTATT TTTATAGGTCTGGTGGTACTAACAAAATGACATCATAGTAATCATATTGA TCTCTCTCGTTCTTTTGCACCCCTCCCGACGGGACGGTATGATTGGATTC GGTACTCGCACGGTGCGCTACCGCTCTGCCTCAGCGTCAAGTACGGCGCC GAGGAGCCCCCGCAGTACCCCGCCGATGACGACAGGGTTCCGGGAAAGCA AGAGGCGTTCACGATCGGCACGGACCAAGCGGAGGAGGAGGTGCCCTTTC CTTTTCTTTCTCGCCTTCTAGTTTCATGACGGGGATTGGGGTCAGGCAGC CTAGAGTCGTGATGCGCTTTTATATAGTATAATATCGTGTGTTGTGTGTA ATTGTTTGTGTGTTTGTATTTATTAACTTGCACATAACCGCGCAATCCGG CCCTATCATCCTAGTCATTACATGCCACTCGCATTGATCCTCCCAAGGGA AGATCAATGTTGAATTTATTGCACATAACCGCGCAATCCGGCCCTGTCAT CCTAGTTGTTATATGCCACAGTACTCGCATAGATCCTCCCAAGGATGGAT CAATGATAGTTGTGTGTGCGGACGAGCGTACCGCAAGGCTGGTATTTGGG TCGTCGTTGGAAATGAAATGAGAAGTTGTGTTTGATTTTATTTAATTATA TTCATACTAAAGAGCTCTTCTTTTACGAACGACATGTGTGGTGGAGTGAT AGCAGAGATGATTTTACTTAGCGTAGGGTTTGCCAGAGCCCAGAAGGCGG GCGCGTATGGACATTGGGGGGTGGAGTTTGTACGTACCGCTTCACGCTAC GGGGATCACAATGGGAGGTTCCGCCTCTTCCATGCCAGGTTGAGAGGGTA TTATAGTCGGTTCTGATTGAATATTTCCAAGTGAAGAATATGCACCAGCT GGTGTAAACGTCTATAATACCAACTGTTTGGCAATTCTGTCGATTCTGGC TGTGCGCTTGTGAGACGAGACAATTCTCCACGAGCTGGTTTGAGCGTTGT CATCAATCAAAGTTTCCCCTCTCTATTATATGATACATCCCGTGTTCGAT CGAGTATCCTCCAGGGCACAAGGTAAGTTAAGGCCTTTTTTTCCCTTTGC CTTGCTCGCCTTGCTTGTTCTCATCGCAGCCGGGAACCAAAGAGGTTAGG GTGCTGCACTATTACCGACCAGAGTACCAAGGCCCCCGCAGCAGCTACCG AAGAACTCCCGATATGAAGCGACAACTCCTCCTGCTTGACAGGTGCGCCC CCCAGGCGTTCCACAAGTCACCCTGACTGTAGCGATAGCCTGTGTTTTGT AACGTGAGCTAATAGTATGAAATACCTGGCAGGTTTGTACTCTATTATTT ATACAAATAGCGAAACCGAAACTGTTTTATTCCGTTTTATTCTTCTTTTT CCACAGGTTTTGGTTGGGTTCACTTCTTGCTTCCCTGGTTCAGTTCGCCT GAGTCCAGTCGCATAGTGGGTCCGTCGTAGGCGTACACAGTGCCAGCAGG TTGTTTGGGAAAGGGAAGGGAACCGACAAAATATATACAAGTCCAATATA CAAATCACACGGGGGGGGAGGGAGGTCATGTCTCCACCCTATCACATTAT GTTACTCTCAAATAAAAAGTAACCATCGTGTCTGTCTGTGGCTATGTCGA ACCTTTTCTGACCCTCGACGCCCAGGCCGGCGCATTTTTTGTGGATGGAG GTTGCTGCGAAGGCGCTTACCTTCAAGGCTGGCGAGCTAGAGCCGGTTTT CTGCTCTCTGACGCTGTATAAAATCGTGTCTCGCCAGGGGAAGAAAGGGG CCGAGGTGGACCTCTCCCGCAGCGGAAGAGTCTCGGAAACGTTCTGGCGA GTAGGCGGGGGATGGAGACGTGGCGTTTGTTTTCTAATGTGCCTTTCTTC CCGCTCTTTTCGACGCCCCTTTATTTTTACAAACATCCAATAGGTTTTGT ACTGCTATTTTTAGGAGGCGTTACTTTTCCTCTGTATACTGCAGGGTGCA GCGGCAGAAACGAGCCCTCTCAATCTCTTTCTCTCTTTCGAGACTTTCGT TGCGAGCATAATTGGAATACAGCCGATACCATGCGAGCATGCAAACGCAG AACCGAATCTCCTCGGCGTCGCTCGACGTTTTTTCGCTGCGAGGGTTCGC GGACAAAAAACCGTGCAGGCCGTGACGCGGGGATCCTCTTCGTCGCCGAA CCCCCCAATCATGCCCATCGCGGGCCCAAACAACCTTTTCGGGGGCCGGG GAGAACCTTTTATCTCCACAACCCATTCTCTTCCTACCCGGCAGGTTCGA CTTAAACTCGGGAAACACCCGGCGCAAGTTCGCTCACGTCTTCACCCGCG AGAGCCCCTCCGGAAACCCGGACGATATCGCAACGCCCCCCATCATCCTC ACGGGGTCGTCCACCCGGTCCACCGCGAACATCGGCGTGGGGAGCTCAAG CCGCAAGAGGGGGTCGGCGCAGGAGAGGAACGTGACTGGTTGCCGCCGGG CGCTGTTTGCGCTCGATCCTAAGAACGCCGACGGGCGGTTGTTCTTGATC TTGCAGCTCAGCAAGGTTTTGCAGGGGGAGCCTGAGAAGGTGAGCTGGGA TGAGGGAATGAGGGAAGGGGGCGCGTAAAGAGGTAGATTTTCATAGAGGG GGCCGGGGCGGAGGGGGGAAAGATCGTTCTGGTCTGGGAAGGGTCCCAGG TAGAACCGTCTAGGAGTCGGGTGGAAGAGTGAGTGGAGCTCGCTAGGTCT GGCAACCCCTCTGGCACCCTCGCCCCCATGTTCATATGATTGTTCTGTGT CCTGGAGAAGTGAGAGCTTTTGAGTCCAGATTTTCGATCCGAGATGTTTG GGGTTTTAGCACCGCCATTCAACTATTTGTAGTGTCTGTGCGTGTGAAGC ACCTTTCAACCCTCTTGATCCCTGGTTTGGTTTGTCCTCTACGAAAACCT CGGGAAAGCTTGCACCCGCCTTCTCTTGTTCCAATTACGATGCTCGATGT TGAATAGTTATCCTGTGAACCCCTTTGGAACTGGTGCTCCTGCGGACCAT ATATATGAACAGACCGGGCAAGCGACTATTGACCTCATCCAGAAGTGGAT ATGACCGAAAGGAAAACATGCATTTGGGGCCCACGCCTTCCCAAGACGAA TAAACCGTAACCTTTCATAGAACATGCTGCGATGAAAGAAAGATTAACCG TGACTAGGTCTTAACCGAGAGCCTTTTGCCATTTTTGATGTACTTTGGAG AGAAGTAATTTAGCGTGTGCTCCACAAGCAAGTTGCTCCCGACCCTTCTC TTTGCCGCATATTGTCTTCAGTTTTTCGGCGCACAAAAGCCGGTACTATA TCACAACATACCAGTATAGTATACTGAGTACCTGGTACGAAACTGTTATC AGCAGGCAGCGTAACTTCCATCAATATTCGAGTTGGTGTTATTCAACCAC TCGGTCAGCCACGCGCTCTCCATCTTCACAACCAAACGAATGCCCTCTAC CGTAGCGACAGCGCCATCAATGGGCACTTTCATCAAGTCCGAAGAATTGC CGAGCTTGGCATGTATCTAGGCCGTAGCGAGCTACAACATGGGGTACAAG TAGAGCCCAACTCATGTGGGTCGCTCGTCTTTCTATTAATAGTCTTCGAT GAGGAGACATGATGAGATGAACGCTAGACTCATCTTACTTAGATACTACG CTATCTAAACTGCATTGAATGTTCCTTTCAGGATTGGCCACAAGGGACTT TATCGAGGTCTGTGCATATCGGTCACGATTTGCGCTGGTGCCCTGTCTCG GTCGCTTCATCTTGAGTAGAACTCGCAACCTACTGTTTGCACCGTAAAGC AGGATTTCAGAGTACTCCTTTTTGTTCAGTATACTGTAATTGATATACTG TCGTCTCTCCCCGATTCACGCCTTGCGATTTTTTATCGCGATGCAAGTTC AGCAATCTTACAACTTATCAACCGATGGTTGAATTCTACTTTACTCGCGT TCCCACGCTTTCCGTTACGGAAGAAAGGACACAAATTCTGCTTAAGCTAA GAATCGAACTCACGACTTCCGCACTAGCAGGTGTGCAGGTTACCTACTAG ACTTGAGAGGCAGAAACCAAGAATCGCAACCCGATTCACAACAACTAGGA AGGTCTAGGTGCGTTCTGTATTTTCTTCAAACTAGGAAGCAGTGTCCAGC CTGAAAAAGGTTCGTGAACACAACACAGCGGATTGTACGAAGAACGTAGA ATCTCCCGTGCCCTTCAGTTTCTGTACTTGTAGTACGCACGGTTTGAACG ACTAGACCAACAAAAACTTGTATCTTTGTGTTACCGTGCGCGTCTCCCGT GGTCTTTCCACCAACAACACTGACCTTTAAATAACAGGCGGCATGTAGAA CATAAATGGTCACAACTCTTCGGAGCCAAAAAAATCCACTCTCGTTGCTC TCGCCACTTTCGTTGCCCCCGTTATGAGGTTTTCTACTTCAACTACGCAC CCAGTTGCGGGCTGGGCTTTTCGTGGGACGTTACTAGTCTGTGTAGGCGT TATTACATAAGTCCCCGGGGATATTTTGGGGGTTACTGGTGCAATAGGCT GCAGCACATCGTGAAACGTAGGCCCGTTCGGACAGCCGACCAATCAGATG TAGGACGCTAAAGTGTAACTCAAGTTACGGTTTACAACCCCCTAGTTCCA TAAGAGTTAATATATGTAGGTAGGCTAGACTTGTGGTGTATTGCTGACGT TTAGGCCTGTCCCCATTCTGCTATTATAGCATAACTTGTAGCATAATCGG CGAAAAAGAGCATAAGGAAAAGTATAATTGGAAAGGAGCAATGATCGAGC ATATTTGCGCATATTGAAGCATAACTTAAGCAGAAACAAGCATATATGCC CATGCCAGTAGCATATGCTGCTCCATTTAGGGCAGGAGGTTACCAAAAAG GGGCCATAATAGGACAAAAAGGCTCTGAGGCACTTATGGAGCACCGATTT TTTCCAGAGATATGCAGTTTTTCGAGAGATATGCAGTTTGGGACCAAAAT AGCCAGTAAGTAGCCTAGAAATATATACTCACAGTAATCCAGATATCTCG AGACATATCGCGAGAAAATTAAAACCAATAATGACTGGCACAGATAAAAA GCCAACGACCATAACGTGACGTTTCAAGCAAACGTCCCTCCGAAAAAGGA GCATAAGTGGAGGCACAAGCCCCAAAAAGAGCATATTCAGGGGATGCTCA GAAGGTCTAGGTGCATTGTGTATTTTCTTCAAAAACCTAAACAATAGAAA CAACCATAATGTGGCGTTTGAAGCATAAAGGCCCCCCCAAAAGGAGCATA AAGTGGGGGCTAAAACACCAAAAAGAGCATAATCCACAAGCATAATTGCC TTCGGAAGCATAAGTTTGCCCAAAAAAAGAGCATAACAAATATATATATA TATATGGGGACAGCCCTACTGACGTATTTGTATTTTGTATATTTCCATGT TTTCTACCTCCCCTCATCCGCATCCACACCCACGTAAATCGAAACCCCCG GTGAAACGCAAGTCCCTCGCAATCTCCCAAGCCCAGAATTCATTCCCGGT GGGTTTGGCGTCACTGGGCACTCCTTCATTTTGGTGTGTGCGTGCTTGAA AGCTTATGCCTTGGCAACTGTTTCCTGCCGCCCTTCTTCGTCCCGACTGA CTACGACGTACCAGGTTTTCATCAAGTAAAAAATTACACATACAGATATA TCTCGAAATGTATATTTATATATTTTGTATATCTTGACTTGTCTTTCGAT TTCTTTCGTTGGACATTGGTCGATCTAAATTCATGGTGGATGGATTGATC ACCGACCAACCTGCAAAAGGTGCTGGACGCGTATTCGAGGGGGGGCAGGA ATAAATACAACGCGGATAGCGCTGCGGAGGAGGCCGCGCAGCGATTGTGG AGGTGGGAGAAGAACGCCTCATTATCGCTACGACCCCCCCCCCCCCCCCT TATTATGTTTGAATGCATGTACAGGAGTATTTATTTTTTATATAGCGTGA TCTCCGACGCCGCAAATGCGTTCCAACGGCGCGGGGGGGCAATAAAACCT GATATCTCAACGGGAGGCGAAAGCTCTGCGATAGATCGATGCAATAGACT ATTTTGCCTGTTCAGTGAGAGTCGTTAGGGCAACACATATCGTAGCGTTA TGGACACTGCACTGTCTGAAACTTACATCAATGTCATGCATGCGTATTAC GATATCACTTGAGTGCGCCCTGGAGCCGAGTCCTCTCTCTAGAAAATTTT CGCCACGGCTCCACGTGAAATAAAAATAAACTATAAAGTACTATAAAGAA CACAATTATATGTGAAACATTACATGAATTTCATGTACGCATATTATGAT ATCACTTGAGTGCGCCCTGGAGTCGAGTCCTCTCTCTAGGAAGCTTTCAC AACGGTTCCACTTGAAATACAAATATACTTTCAAGTACTATAAAGAAGTC AATGTAGTTTGCCGTACGCATGCCTTGCCATTTATGCGATCAGGGCATAC TATTTTGAAGTTATTTCCTTCACAGGGTTTTTCTCGGCTGTTTTTTTTAT TTTTATTTTCTAATACTCTCCCCTCCCCCCCCCCTCCCAAGGAAAAGCAA CGCTACCGTAGTGAAACCCACTTGGTGCGACAACACTCACTCGTATGTCC AGGTACCGGCAGCCGCTGGCGTTCGGAGTTTACCAGGTGGCTCCGTCAGG GAGGATACAGGGGGGCGAAGATGTTGTCATGTCGCTGTACCGGCAAAACG ACGGCCTCAGCGAGGAAGGGTTGATGCGA
back to top

Coding sequence (CDS) from alignment at F-distichus_contig10160:1616..9444-

>mRNA_F-distichus_contig10160.130.1 ID=mRNA_F-distichus_contig10160.130.1|Name=mRNA_F-distichus_contig10160.130.1|organism=Fucus distichus monoicous|type=CDS|length=2616bp|location=Sequence derived from alignment at F-distichus_contig10160:1616..9444- (Fucus distichus monoicous)
CGGACCAGCCGCCGCTGCCGCCCCCGGGAGAAAACAGCACCGCCACCGGC
TCCCTCCCGGGCATTTCGACCAGAATGGGCAGGTCGAGTTCGACCACGAG
AACGACCGTCAGTTCTGGCAGGAGTTACTACCCGAAGGCAAGCCAGCCGC
TTTGACCGGACCAGCCGCCGCTGCCGCCCCCGGGAGAAAACAGCACCGCC
ACCGGCTCCCTCCCGGGCATTTCGACCAGAATGGGCAGGTCGAGTTCGAC
CACGAGAACGACCGTCAGTTCTGGCAGGAGTTACTACCCGAAGGCAAGCC
AGCCGCTTTGACGACAAGGAGCCCACTTTCATGTTTCCCGTGAACGATCT
GGAGGTGACAATCTCTCCTCGAGGACGACCGTTCCGCCCCCCCCTTCTCG
CGCGGGGCTCGGCGACGCCGTTCATCGCCACGGCTTACGATGAGTTCACC
CGAGACTGGGTCGCGCTGTCCATTGGACGGCTTGCGCAGAAGGCCGTCAC
GTGGACAAGGAGCCCACTTTCATGTTTCCCGTGAACGATCTGGAGGTGAC
AATCTCTCCTCGAGGACGACCGTTCCGCCCCCCCCTTCTCGCGCGGGGCT
CGGCGACGCCGTTCATCGCCACGGCTTACGATGAGTTCACCCGAGACTGG
GTCGCGCTGTCCATTGGACGGCTTGCGCAGAAGGCCGTCACGTGCGTCAA
GTACGGCGCCGAGGAGCCCCCGCAGTACCCCGCCGATGACGACAGGGTTC
CGGGAAAGCAAGAGGCGTTCACGATCGGCACGGACCAAGCGGAGGAGGAG
CGTCAAGTACGGCGCCGAGGAGCCCCCGCAGTACCCCGCCGATGACGACA
GGGTTCCGGGAAAGCAAGAGGCGTTCACGATCGGCACGGACCAAGCGGAG
GAGGAGCCGGGAACCAAAGAGGTTAGGGTGCTGCACTATTACCGACCAGA
GTACCAAGGCCCCCGCAGCAGCTACCGAAGAACTCCCGATATGAAGCGAC
AACTCCTCCTGCTTGACAGCCGGGAACCAAAGAGGTTAGGGTGCTGCACT
ATTACCGACCAGAGTACCAAGGCCCCCGCAGCAGCTACCGAAGAACTCCC
GATATGAAGCGACAACTCCTCCTGCTTGACAGGCCGGCGCATTTTTTGTG
GATGGAGGTTGCTGCGAAGGCGCTTACCTTCAAGGCTGGCGAGCTAGAGC
CGGTTTTCTGCTCTCTGACGCTGTATAAAATCGTGTCTCGCCAGGGGAAG
AAAGGGGCCGAGGTGGACCTCTCCCGCAGCGGAAGAGTCTCGGAAACGTT
CTGGCCGGCGCATTTTTTGTGGATGGAGGTTGCTGCGAAGGCGCTTACCT
TCAAGGCTGGCGAGCTAGAGCCGGTTTTCTGCTCTCTGACGCTGTATAAA
ATCGTGTCTCGCCAGGGGAAGAAAGGGGCCGAGGTGGACCTCTCCCGCAG
CGGAAGAGTCTCGGAAACGTTCTGGTTCGACTTAAACTCGGGAAACACCC
GGCGCAAGTTCGCTCACGTCTTCACCCGCGAGAGCCCCTCCGGAAACCCG
GACGATATCGCAACGCCCCCCATCATCCTCACGGGGTCGTCCACCCGGTC
CACCGCGAACATCGGCGTGGGGAGCTCAAGCCGCAAGAGGGGGTCGGCGC
AGGAGAGGAACGTGACTGGTTGCCGCCGGGCGCTGTTTGCGCTCGATCCT
AAGAACGCCGACGGGCGGTTGTTCTTGATCTTGCAGCTCAGCAAGGTTTT
GCAGGGGGAGCCTGAGAAGGTGAGCTGGGATGAGGGAATGAGGGAAGGGG
GCGCGTTCGACTTAAACTCGGGAAACACCCGGCGCAAGTTCGCTCACGTC
TTCACCCGCGAGAGCCCCTCCGGAAACCCGGACGATATCGCAACGCCCCC
CATCATCCTCACGGGGTCGTCCACCCGGTCCACCGCGAACATCGGCGTGG
GGAGCTCAAGCCGCAAGAGGGGGTCGGCGCAGGAGAGGAACGTGACTGGT
TGCCGCCGGGCGCTGTTTGCGCTCGATCCTAAGAACGCCGACGGGCGGTT
GTTCTTGATCTTGCAGCTCAGCAAGGTTTTGCAGGGGGAGCCTGAGAAGG
TGAGCTGGGATGAGGGAATGAGGGAAGGGGGCGCTTCAGCAATCTTACAA
CTTATCAACCGATGGTTGAATTCTACTTTACTCGCTTCAGCAATCTTACA
ACTTATCAACCGATGGTTGAATTCTACTTTACTCGCGGGGGGCAGGAATA
AATACAACGCGGATAGCGCTGCGGAGGAGGCCGCGCAGCGATTGTGGAGG
GGGGGCAGGAATAAATACAACGCGGATAGCGCTGCGGAGGAGGCCGCGCA
GCGATTGTGGAGGTACCGGCAGCCGCTGGCGTTCGGAGTTTACCAGGTGG
CTCCGTCAGGGAGGATACAGGGGGGCGAAGATGTTGTCATGTCGCTGTAC
CGGCAAAACGACGGCCTCAGCGAGGAAGGGTTGATGCGAGTACCGGCAGC
CGCTGGCGTTCGGAGTTTACCAGGTGGCTCCGTCAGGGAGGATACAGGGG
GGCGAAGATGTTGTCATGTCGCTGTACCGGCAAAACGACGGCCTCAGCGA
GGAAGGGTTGATGCGA
back to top