mRNA_F-distichus_contig101463.117.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig101463.117.1
Unique NamemRNA_F-distichus_contig101463.117.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
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BLAST of mRNA_F-distichus_contig101463.117.1 vs. uniprot
Match: A0A6H5JII2_9PHAE (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JII2_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 2.420e-99
Identity = 142/150 (94.67%), Postives = 148/150 (98.67%), Query Frame = 1 
Query:   55 QVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPEQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLGGCSVDGAIVVTTPQAMAMADVRKELSFCRKTGLTVLGVVENMSGLTV 504
            QVGLLD+DICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLP+QDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVV+YLGGC+VDGA+VVTTPQ +AMADVRKELSFCRKTGL VLGVVENMSGLTV
Sbjct:  107 QVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYLGGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTV 256
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BLAST of mRNA_F-distichus_contig101463.117.1 vs. uniprot
Match: A0A7S2UWA7_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWA7_9STRA)

HSP 1 Score: 264 bits (675), Expect = 2.830e-85
Identity = 127/167 (76.05%), Postives = 146/167 (87.43%), Query Frame = 1 
Query:    1 GGAETQTFCAAVAWNAR---HQVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPEQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLGGCSVDGAIVVTTPQAMAMADVRKELSFCRKTGLTVLGVVENMS 492
            GG    TF   +A+       QVGLLD+DICGPSVPRMLGLTG+EVHQSS+GWSPV+V+D LGVMSIGFMLP QD+AVIWRGP+KNGLI+QFLTDVDWGQLDYLVIDTPPGTSDEH+S+V+YL GC+ DGA+VVTTPQ +AMADVRKELSFC KTG+ VLG+VENM+
Sbjct:   74 GGVGKSTFACQLAFTLAAKGKQVGLLDLDICGPSVPRMLGLTGQEVHQSSTGWSPVYVSDLLGVMSIGFMLPGQDDAVIWRGPRKNGLIRQFLTDVDWGQLDYLVIDTPPGTSDEHISIVQYLKGCAADGAVVVTTPQEVAMADVRKELSFCSKTGIRVLGLVENMA 240
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BLAST of mRNA_F-distichus_contig101463.117.1 vs. uniprot
Match: A0A6V1SZ98_HETAK (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SZ98_HETAK)

HSP 1 Score: 263 bits (672), Expect = 7.570e-85
Identity = 127/169 (75.15%), Postives = 145/169 (85.80%), Query Frame = 1 
Query:    1 GGAETQTFCAAVAWNAR---HQVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPEQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLGGCSVDGAIVVTTPQAMAMADVRKELSFCRKTGLTVLGVVENMSGL 498
            GG    TF   +A++     +QVGLLDVDICGPSVP MLGL G+EVHQS+SGWSPV+V D LGVMSIGFMLP QD+AVIWRGP+KNGLI+QFLTDVDWG LDYLV+DTPPGTSDEH+S+V+YL G  VDGA+VVTTPQ +AMADVRKELSFC KTGL V+G+VENMSGL
Sbjct:   73 GGVGKSTFACQLAFSLAKRGYQVGLLDVDICGPSVPTMLGLVGQEVHQSASGWSPVYVGDRLGVMSIGFMLPRQDDAVIWRGPRKNGLIRQFLTDVDWGHLDYLVVDTPPGTSDEHISIVQYLKGAGVDGAVVVTTPQEVAMADVRKELSFCAKTGLPVVGLVENMSGL 241
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BLAST of mRNA_F-distichus_contig101463.117.1 vs. uniprot
Match: W7TWQ3_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWQ3_9STRA)

HSP 1 Score: 263 bits (673), Expect = 8.130e-85
Identity = 124/162 (76.54%), Postives = 145/162 (89.51%), Query Frame = 1 
Query:   22 FCAAVAWNARHQVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPEQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYL-GGCSVDGAIVVTTPQAMAMADVRKELSFCRKTGLTVLGVVENMSGLTV 504
            FC A  +    QVGLLDVDICGPSVPR++GLTG+EVHQS++GWSPV+V D LGVMSIGFMLP  D+AVIWRGP+KNGLIKQFLTDVDWG+LDYL+IDTPPGTSDEH+S+++YL  GC +DGA+VVTTPQ +AMADVRKEL+FC+KTGL V+GVVENMSGL V
Sbjct:   92 FCLAQQYGL--QVGLLDVDICGPSVPRVMGLTGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNADDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIIQYLKDGCGIDGAVVVTTPQEVAMADVRKELNFCKKTGLQVVGVVENMSGLNV 251
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BLAST of mRNA_F-distichus_contig101463.117.1 vs. uniprot
Match: A0A7S3H9T7_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9T7_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.480e-81
Identity = 119/171 (69.59%), Postives = 144/171 (84.21%), Query Frame = 1 
Query:    1 GGAETQTFCAAVAWNARHQ---VGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPEQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLGGCSVDGAIVVTTPQAMAMADVRKELSFCRKTGLTVLGVVENMSGLTV 504
            GG    TF A +A+    Q   VGLLD+DICGPS+PRMLGL G EVHQS+SGWSPV+V D LGVMSIGFMLP +D+A+IWRGP+KNGLIKQFLTDV W +LDYL+IDTPPGTSDEH+S+V+YL   ++DGA+V+TTPQ ++MADVRKEL+FC+KTGL VLGVVENMS + +
Sbjct:   83 GGVGKSTFSAQLAFTLAQQGKQVGLLDIDICGPSIPRMLGLVGHEVHQSASGWSPVYVDDNLGVMSIGFMLPSKDDAIIWRGPRKNGLIKQFLTDVVWNELDYLIIDTPPGTSDEHISIVQYLKSANIDGAVVITTPQEVSMADVRKELNFCKKTGLRVLGVVENMSDIRI 253
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BLAST of mRNA_F-distichus_contig101463.117.1 vs. uniprot
Match: T0RQD5_SAPDV (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0RQD5_SAPDV)

HSP 1 Score: 253 bits (646), Expect = 2.790e-81
Identity = 116/149 (77.85%), Postives = 136/149 (91.28%), Query Frame = 1 
Query:   52 HQVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPEQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLGGCSVDGAIVVTTPQAMAMADVRKELSFCRKTGLTVLGVVENMSGL 498
            HQVGLLDVDI GPSVPRMLGL+G+EVHQS+ GWSPV+V D LGVMSIGFMLP QD+A+IWRGPKK+GLIKQFLTDV WG+LDYL+IDTPPGTSDEH+S+V+Y+    +DGA+VVTTPQ +AMADVRKEL+FCRKT L +LGVVENM+G+
Sbjct:   87 HQVGLLDVDITGPSVPRMLGLSGQEVHQSNDGWSPVYVDDNLGVMSIGFMLPNQDDAIIWRGPKKSGLIKQFLTDVTWGELDYLIIDTPPGTSDEHISIVQYMKETKIDGAVVVTTPQEVAMADVRKELNFCRKTNLPILGVVENMAGI 235
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BLAST of mRNA_F-distichus_contig101463.117.1 vs. uniprot
Match: A0A835ZEQ2_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ2_9STRA)

HSP 1 Score: 252 bits (644), Expect = 6.910e-81
Identity = 119/169 (70.41%), Postives = 143/169 (84.62%), Query Frame = 1 
Query:    1 GGAETQTFCAAVAW---NARHQVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPEQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLGGCSVDGAIVVTTPQAMAMADVRKELSFCRKTGLTVLGVVENMSGL 498
            GG    T    +A+   +  HQVGLLDVDICGPSVPRMLGLTG+EVHQS++GWSPV+V D LGVMSIGFMLP  D+AVIWRGP+KNGLIKQFLTDVDWG LDYLVIDTPPGTSDEH+S ++YL GC+VDGA++V+T Q +++ADVRKE++FC+KT + VLGVV NM+ L
Sbjct:   68 GGVGKSTMACQLAFALASQGHQVGLLDVDICGPSVPRMLGLTGQEVHQSAAGWSPVYVEDNLGVMSIGFMLPGSDDAVIWRGPRKNGLIKQFLTDVDWGTLDYLVIDTPPGTSDEHISTIQYLKGCNVDGAVIVSTNQEVSLADVRKEINFCKKTSIKVLGVVGNMAAL 236
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BLAST of mRNA_F-distichus_contig101463.117.1 vs. uniprot
Match: A0A7S1XNV4_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNV4_9STRA)

HSP 1 Score: 251 bits (641), Expect = 3.670e-80
Identity = 121/171 (70.76%), Postives = 143/171 (83.63%), Query Frame = 1 
Query:    1 GGAETQTFCAAVAWNARHQ---VGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPEQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLGGCSVDGAIVVTTPQAMAMADVRKELSFCRKTGLTVLGVVENMSGLTV 504
            GG    TF   +A+    Q   VGLLD+DICGPSVPRMLGLTG++VHQS+SGWSPV+V D LGVMSIGFMLP  D+AVIWRGP+K+GLIK FLT+V WG+LDYL+IDTPPGTSDEH+S+V+YL    VDGA+VVTTPQ ++MADVRKELSFC K+GL VLG+VENM+GL V
Sbjct:   93 GGVGKSTFSCQLAFALAAQGKNVGLLDIDICGPSVPRMLGLTGQQVHQSASGWSPVYVADNLGVMSIGFMLPSTDDAVIWRGPRKSGLIKSFLTEVHWGELDYLIIDTPPGTSDEHISIVQYLRAIEVDGALVVTTPQEVSMADVRKELSFCAKSGLKVLGLVENMAGLRV 263
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BLAST of mRNA_F-distichus_contig101463.117.1 vs. uniprot
Match: A0A453P071_AEGTS (Uncharacterized protein n=3 Tax=Triticinae TaxID=1648030 RepID=A0A453P071_AEGTS)

HSP 1 Score: 245 bits (626), Expect = 1.050e-78
Identity = 112/169 (66.27%), Postives = 140/169 (82.84%), Query Frame = 1 
Query:    1 GGAETQTFCAAVAW---NARHQVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPEQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLGGCSVDGAIVVTTPQAMAMADVRKELSFCRKTGLTVLGVVENMSGL 498
            GG    TF A +++      HQVGLLD+DICGPS+P+MLGL G+++HQS+ GWSP++V   LGVMSIGFMLP  D+AVIWRGP+KNGLIKQFL DVDWG++DYLV+D PPGTSDEH+S+V+YL    VDGAI+VTTPQ +++ DVRKE++FC+K G+ VLGVVENMSGL
Sbjct:   35 GGVGKSTFSAQLSFALAEMDHQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPIYVESNLGVMSIGFMLPNPDDAVIWRGPRKNGLIKQFLKDVDWGEIDYLVVDAPPGTSDEHISIVQYLQATEVDGAIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGL 203
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BLAST of mRNA_F-distichus_contig101463.117.1 vs. uniprot
Match: A0A446YJZ7_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446YJZ7_TRITD)

HSP 1 Score: 245 bits (626), Expect = 1.150e-78
Identity = 112/169 (66.27%), Postives = 140/169 (82.84%), Query Frame = 1 
Query:    1 GGAETQTFCAAVAW---NARHQVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPEQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLGGCSVDGAIVVTTPQAMAMADVRKELSFCRKTGLTVLGVVENMSGL 498
            GG    TF A +++      HQVGLLD+DICGPS+P+MLGL G+++HQS+ GWSP++V   LGVMSIGFMLP  D+AVIWRGP+KNGLIKQFL DVDWG++DYLV+D PPGTSDEH+S+V+YL    VDGAI+VTTPQ +++ DVRKE++FC+K G+ VLGVVENMSGL
Sbjct:   34 GGVGKSTFSAQLSFALAEMDHQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPIYVESNLGVMSIGFMLPNPDDAVIWRGPRKNGLIKQFLKDVDWGEIDYLVVDAPPGTSDEHISIVQYLQATEVDGAIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGL 202
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101463.117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JII2_9PHAE2.420e-9994.67Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A7S2UWA7_9STRA2.830e-8576.05Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A6V1SZ98_HETAK7.570e-8575.15Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
W7TWQ3_9STRA8.130e-8576.54Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A7S3H9T7_9STRA1.480e-8169.59Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
T0RQD5_SAPDV2.790e-8177.85Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A835ZEQ2_9STRA6.910e-8170.41Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A7S1XNV4_9STRA3.670e-8070.76Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A453P071_AEGTS1.050e-7866.27Uncharacterized protein n=3 Tax=Triticinae TaxID=1... [more]
A0A446YJZ7_TRITD1.150e-7866.27Uncharacterized protein n=1 Tax=Triticum turgidum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101463contigF-distichus_contig101463:150..1825 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score301.6
Seed ortholog evalue2.4e-79
Seed eggNOG ortholog2880.D8LDZ4
Preferred nameNBP35
KEGG rclassRC00028,RC00049,RC00077
KEGG koko:K03593,ko:K12316
KEGG ReactionR00028,R00801,R00802
KEGG Pathwayko00052,ko00500,ko01100,ko04142,map00052,map00500,map01100,map04142
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001558,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008033,GO:0008104,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0010564,GO:0010639,GO:0010824,GO:0010826,GO:0010948,GO:0015630,GO:0016020,GO:0016043,GO:0016070,GO:0016226,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0031344,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0034470,GO:0034613,GO:0034641,GO:0034660,GO:0036094,GO:0040008,GO:0042592,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044572,GO:0045786,GO:0046483,GO:0046605,GO:0046606,GO:0046872,GO:0046914,GO:0046916,GO:0046983,GO:0048037,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0051128,GO:0051129,GO:0051179,GO:0051186,GO:0051493,GO:0051494,GO:0051536,GO:0051539,GO:0051540,GO:0051640,GO:0051641,GO:0051642,GO:0051726,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0060491,GO:0061842,GO:0065007,GO:0065008,GO:0070507,GO:0070727,GO:0071704,GO:0071840,GO:0071944,GO:0072697,GO:0090304,GO:0097159,GO:0098771,GO:0120032,GO:0120035,GO:1901265,GO:1901360,GO:1901363,GO:1902017,GO:1902115,GO:1902494,GO:1902855,GO:1904564,GO:1904949,GO:1990229,GO:1990778
EggNOG free text desc.Component of the cytosolic iron-sulfur (Fe S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins
EggNOG OGsCOG0489@1,KOG3022@2759
Ec32 ortholog descriptionMrp/NBP35 ATP-binding protein
Ec32 orthologEc-23_003200.1
EC3.2.1.20
COG Functional cat.D
CAZyGH31
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029,ko03036,ko04147
Exons3
Model size531
Cds size531
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101463.117.1prot_F-distichus_contig101463.117.1Fucus distichus monoicouspolypeptideF-distichus_contig101463 150..1825 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928930.4852514-CDS-F-distichus_contig101463:149..4221622928930.4852514-CDS-F-distichus_contig101463:149..422Fucus distichus monoicousCDSF-distichus_contig101463 150..422 +
1690885071.15504-CDS-F-distichus_contig101463:149..4221690885071.15504-CDS-F-distichus_contig101463:149..422Fucus distichus monoicousCDSF-distichus_contig101463 150..422 +
1622928930.5007455-CDS-F-distichus_contig101463:835..9711622928930.5007455-CDS-F-distichus_contig101463:835..971Fucus distichus monoicousCDSF-distichus_contig101463 836..971 +
1690885071.1757863-CDS-F-distichus_contig101463:835..9711690885071.1757863-CDS-F-distichus_contig101463:835..971Fucus distichus monoicousCDSF-distichus_contig101463 836..971 +
1622928930.520994-CDS-F-distichus_contig101463:1703..18251622928930.520994-CDS-F-distichus_contig101463:1703..1825Fucus distichus monoicousCDSF-distichus_contig101463 1704..1825 +
1690885071.1848862-CDS-F-distichus_contig101463:1703..18251690885071.1848862-CDS-F-distichus_contig101463:1703..1825Fucus distichus monoicousCDSF-distichus_contig101463 1704..1825 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig101463.117.1

>prot_F-distichus_contig101463.117.1 ID=prot_F-distichus_contig101463.117.1|Name=mRNA_F-distichus_contig101463.117.1|organism=Fucus distichus monoicous|type=polypeptide|length=177bp
GGAETQTFCAAVAWNARHQVGLLDVDICGPSVPRMLGLTGREVHQSSSGW
SPVWVTDGLGVMSIGFMLPEQDNAVIWRGPKKNGLIKQFLTDVDWGQLDY
LVIDTPPGTSDEHMSVVRYLGGCSVDGAIVVTTPQAMAMADVRKELSFCR
KTGLTVLGVVENMSGLTVREGSGVGR*
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mRNA from alignment at F-distichus_contig101463:150..1825+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig101463.117.1 ID=mRNA_F-distichus_contig101463.117.1|Name=mRNA_F-distichus_contig101463.117.1|organism=Fucus distichus monoicous|type=mRNA|length=1676bp|location=Sequence derived from alignment at F-distichus_contig101463:150..1825+ (Fucus distichus monoicous)
GGCGGTGCCGAAACACAAACATTTTGCGCTGCTGTTGCGTGGAACGCCCG
CCATCAGGTGGGGCTCCTCGACGTTGACATCTGCGGCCCCAGCGTCCCGC
GCATGCTTGGCCTCACGGGGCGCGAGGTGCACCAGAGCTCGTCGGGATGG
TCGCCGGTGTGGGTCACCGACGGCCTGGGGGTCATGTCGATCGGGTTTAT
GCTGCCGGAGCAGGACAATGCGGTCATCTGGCGGGGGCCAAAGAAGAATG
GCCTCATCAAGCAGTTCCTCACGGTGAGAGATGGGGGGGAGGGGGGGGGC
GTTTCGCACTTTTGAGGGGGCAGACCTTGTGTCTGGCGCACTTTTTTTTT
CTTTTTTTTTAAGATTTAGTGGCTGGCGCACCTTGCTTTTGTTTTTGTAC
TCTTTGCGTGTTACGTATGTCATACAAAGTTTTTTGTTTTGTTTTTTGCC
AAAACCTTGTTCTTTTTTTTCTTTCCTCCAAAGAGGTAATATAAATAGCC
AACTCATATGGGGGGGGGGGGAAGTGGGGGGGGGCAAAAATGGCACATGT
ATTTTTGTTTTGATTTTATCGGCAACAAATCTCGTGAGATCGGATGATCA
CAGCTTACACTGCACCCCTCGAGAGCTGCTGTGTGTCGAGTTACGCTCTT
TTCCCCGCCTGCCCTTTTTTTTTTTTCTTCCACCAGGACGTTGATTGGGG
ACAGCTAGATTACCTCGTGATCGACACCCCACCAGGCACGAGCGACGAGC
ACATGTCGGTGGTCCGTTACCTAGGGGGCTGCTCGGTGGATGGGGCGATT
GTCGTTACTACCCCTCAGGCGAGTGCGCTGCCCAGAGAAGACGCGCGGTT
TATTGCTGTACAGAACGTGCGACCGCCGTTCTAGGTGTCGAGGTGCTTAG
CGTCGGCTTGAGATTATCTGACCGTTCGCTCGCGGATAAGGTAAGGTGAT
GGTTGTTTTGGGGGCAAATGAAGGGTTGGAGGTGAAAGCAGACAGTCGGC
GCGCTTGCGTACAATAAGCTAAGAAGAAAACTGAGACCACTCGAATCTGC
TGCAGCATATACAGCTGATTTGAGGTTACATTACTTCTGCTTGGGGAATA
CGCGCTCAACGTTACATTAATGATTGTTGGGAATCTCAATTCCGTTTGTC
AAGGCTGGGTCGCCCAACGATTACCATCGGTGATTATATGGAGTATGTTC
CATAAACCGTGGGGATATGCTTTGGTGTGTGCTCCCCGGTCGATTTCCTC
TGCACTCTTCTGTACTCGTGCACACAAAAGAGCAAACGCTGCAAATCACG
CAAGATCTTGCCAAGTTTTTCTGTAAACGTTTTTAGCGACGCCGTCGCTT
TTTTTTTCCATGCCAAAAAAATGCTCGCGTAGCGAGTGGTTTGATGGATG
GGGGGGAGGGGGGCGTTGTGTGGTAATATATTTGAAGACGTTCCGTTGTT
TCAAGGCGCTGGTGCTCGTATGCCGACATTGATATATCCCTATACATAAT
AAGCACACTCTCTCCCTCTCTCACACATAAACACACAAATCATACATCAG
GAAGTGGCGATGGCCGACGTGAGGAAAGAGCTTAGCTTCTGCCGAAAAAC
GGGGTTAACGGTGCTGGGGGTGGTGGAAAACATGAGCGGCTTGACGGTGA
GAGAGGGTTCGGGCGTTGGGCGTTGA
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Coding sequence (CDS) from alignment at F-distichus_contig101463:150..1825+

>mRNA_F-distichus_contig101463.117.1 ID=mRNA_F-distichus_contig101463.117.1|Name=mRNA_F-distichus_contig101463.117.1|organism=Fucus distichus monoicous|type=CDS|length=1062bp|location=Sequence derived from alignment at F-distichus_contig101463:150..1825+ (Fucus distichus monoicous)
GGCGGTGCCGAAACACAAACATTTTGCGCTGCTGTTGCGTGGAACGCCCG
CCATCAGGTGGGGCTCCTCGACGTTGACATCTGCGGCCCCAGCGTCCCGC
GCATGCTTGGCCTCACGGGGCGCGAGGTGCACCAGAGCTCGTCGGGATGG
TCGCCGGTGTGGGTCACCGACGGCCTGGGGGTCATGTCGATCGGGTTTAT
GCTGCCGGAGCAGGACAATGCGGTCATCTGGCGGGGGCCAAAGAAGAATG
GCCTCATCAAGCAGTTCCTCACGGGCGGTGCCGAAACACAAACATTTTGC
GCTGCTGTTGCGTGGAACGCCCGCCATCAGGTGGGGCTCCTCGACGTTGA
CATCTGCGGCCCCAGCGTCCCGCGCATGCTTGGCCTCACGGGGCGCGAGG
TGCACCAGAGCTCGTCGGGATGGTCGCCGGTGTGGGTCACCGACGGCCTG
GGGGTCATGTCGATCGGGTTTATGCTGCCGGAGCAGGACAATGCGGTCAT
CTGGCGGGGGCCAAAGAAGAATGGCCTCATCAAGCAGTTCCTCACGGACG
TTGATTGGGGACAGCTAGATTACCTCGTGATCGACACCCCACCAGGCACG
AGCGACGAGCACATGTCGGTGGTCCGTTACCTAGGGGGCTGCTCGGTGGA
TGGGGCGATTGTCGTTACTACCCCTCAGGCGAGACGTTGATTGGGGACAG
CTAGATTACCTCGTGATCGACACCCCACCAGGCACGAGCGACGAGCACAT
GTCGGTGGTCCGTTACCTAGGGGGCTGCTCGGTGGATGGGGCGATTGTCG
TTACTACCCCTCAGGCGATGGCGATGGCCGACGTGAGGAAAGAGCTTAGC
TTCTGCCGAAAAACGGGGTTAACGGTGCTGGGGGTGGTGGAAAACATGAG
CGGCTTGACGGTGAGAGAGGGTTCGGGCGTTGGGCGTTGATGGCGATGGC
CGACGTGAGGAAAGAGCTTAGCTTCTGCCGAAAAACGGGGTTAACGGTGC
TGGGGGTGGTGGAAAACATGAGCGGCTTGACGGTGAGAGAGGGTTCGGGC
GTTGGGCGTTGA
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