mRNA_F-distichus_contig1014.110.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig1014.110.1 vs. uniprot
Match: A0A6H5K2P7_9PHAE (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2P7_9PHAE) HSP 1 Score: 167 bits (422), Expect = 1.480e-46 Identity = 70/117 (59.83%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 1 GGWTAGEFPDNFPYYCGDSFADGQRANMYGCHGGALTQSGYTPGADSTVCGCPDWENA--GILAPAISECVGINPEWVDVAQPWAEHLKKACPTAYTFPYDDQTSTFTCQNLEGGVN 345
GGW G FPD P++CG + G R++MYGC+G L SGYTPGAD+T CGCP+WE+ ++AP IS+C GINPEWV+++ PW H K+ACPTAYTFPYDDQTSTFTC + +G N
Sbjct: 461 GGWEDGTFPDAHPFFCGSEVSGGMRSHMYGCYGTTLAHSGYTPGADTTACGCPEWEDPPYNLMAPPISDCTGINPEWVELSMPWHAHQKRACPTAYTFPYDDQTSTFTCFDGDGPGN 577
BLAST of mRNA_F-distichus_contig1014.110.1 vs. uniprot
Match: D7FRB8_ECTSI (Thaumatin-domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRB8_ECTSI) HSP 1 Score: 113 bits (283), Expect = 6.600e-27 Identity = 53/112 (47.32%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 16 GEFPDNFPYYC--------GDSFADGQRANMYGCHGGALTQSGYTPGADSTVCGCPDWENAGILAPAISECVGINPEWVDVAQPWAEHLKKACPTAYTFPYDDQTSTFTCQN 327
G FP++FP+ C GD+ +++YGC G SGY+ A+ T CGCPDW GI AP+ S C G NP W ++ PW ++LK+ACPTAY FPYDD +STF C+N
Sbjct: 647 GYFPNSFPFMCDKHTMQVIGDNST---YSDIYGCAGPIYGLSGYSRNAEDTACGCPDWPALGINAPSESTCYGKNPYWEALSVPWLKYLKRACPTAYCFPYDDHSSTFVCRN 755
BLAST of mRNA_F-distichus_contig1014.110.1 vs. uniprot
Match: L8GSW0_ACACA (Thaumatin domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GSW0_ACACA) HSP 1 Score: 100 bits (250), Expect = 6.610e-23 Identity = 52/116 (44.83%), Postives = 68/116 (58.62%), Query Frame = 1
Query: 1 GGWTAGEFPDNFPYYCGDSFADGQRANMYGCHGGALTQSGYTPGADSTVCGCPDWENAGILAPA-ISECVGINPEWVDVAQPWAEHLKKACPTAYTFPYDDQTSTFTCQNLEGGVN 345
G WTA + Y G F Q + +YGC G S Y P A ST CGC +W++ G+ P+ ++ C INP WV QP +KKACPT+YT+PYDD +STFTC + GG+N
Sbjct: 257 GYWTADQVCGMNSNY-GAPFDCAQYSRLYGCTNGI--DSCYQPFATSTCCGCANWQDLGVPVPSSVTRCHAINPTWVKNVQPKLLWMKKACPTSYTYPYDDMSSTFTCSEMVGGLN 369
BLAST of mRNA_F-distichus_contig1014.110.1 vs. uniprot
Match: A0A5E4PDG3_9COXI (Uncharacterized protein n=1 Tax=Aquicella siphonis TaxID=254247 RepID=A0A5E4PDG3_9COXI) HSP 1 Score: 96.3 bits (238), Expect = 7.160e-21 Identity = 44/88 (50.00%), Postives = 57/88 (64.77%), Query Frame = 1
Query: 76 ANMYGCHGGALTQSGYTPGADSTVCGCPDWENAGILAPA---ISECVGINPEWVDVAQPWAEHLKKACPTAYTFPYDDQTSTFTCQNL 330
A+++GC GAL QS Y+ GA ST CGC +WE G+ P+ C +NP W +QP LK +CPTAY++PYDD +STFTCQ L
Sbjct: 457 ADLFGCSTGALNQSCYSAGAISTCCGCVNWETLGVTVPSSPITQACNAVNPVWTTNSQPTLLWLKNSCPTAYSYPYDDASSTFTCQVL 544
BLAST of mRNA_F-distichus_contig1014.110.1 vs. uniprot
Match: J9IX81_9SPIT (Thaumatin domain-containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IX81_9SPIT) HSP 1 Score: 93.2 bits (230), Expect = 4.990e-20 Identity = 43/92 (46.74%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 79 NMYGCHGGALTQSGYTPGADSTVCGCPDWENAGILAPAISE---CVGINPEWVDVAQPWAEHLKKACPTAYTFPYDDQTSTFTCQNLEGGVN 345
N+Y C G S Y PGA CGC +W+ G+ P+ E C NP W D + + +KKACPTAYT+PYDD +STFTCQN++GG++
Sbjct: 293 NLYACVG---VGSCYQPGASQGCCGCVNWDEEGVNVPSFPETDRCKNQNPIWHDRVKDTLKWMKKACPTAYTYPYDDISSTFTCQNIQGGIS 381
BLAST of mRNA_F-distichus_contig1014.110.1 vs. uniprot
Match: A0A346QZ21_9HYPH (Uncharacterized protein n=2 Tax=Breoghania sp. L-A4 TaxID=2304600 RepID=A0A346QZ21_9HYPH) HSP 1 Score: 92.4 bits (228), Expect = 1.140e-19 Identity = 48/106 (45.28%), Postives = 57/106 (53.77%), Query Frame = 1
Query: 37 PYYCGDSF-----ADGQRANMYGC----HGGALTQSGYTPGADSTVCGCPDWENAGILAPAISECVGINPEWVDVAQPWAEHLKKACPTAYTFPYDDQTSTFTCQN 327
P+ CG + A G AN++GC G QS YT GA T CGCP+W C IN W QPW LK ACPTAY++PYDD+TSTFTCQ+
Sbjct: 314 PFNCGQAVPAANGAFGTVANLFGCVLDKTGKPAAQSCYTDGASDTCCGCPNWPYP---TDDGKTCQAINSAWTTSVQPWVSFLKNACPTAYSYPYDDKTSTFTCQS 416
BLAST of mRNA_F-distichus_contig1014.110.1 vs. uniprot
Match: A0A166FB32_9AGAM (Uncharacterized protein n=1 Tax=Fibularhizoctonia sp. CBS 109695 TaxID=436010 RepID=A0A166FB32_9AGAM) HSP 1 Score: 90.1 bits (222), Expect = 5.670e-19 Identity = 41/96 (42.71%), Postives = 55/96 (57.29%), Query Frame = 1
Query: 67 GQRANMYGCHGGALTQSGYTPGADSTVCGCPDWEN---AGILAPAISECVGINPEWVDVAQPWAEHLKKACPTAYTFPYDDQTSTFTCQNLEGGVN 345
G + YGC G + S Y PGAD+ CGC +W++ +G + + CV NP W QP +++K CP YT+PYDD +STFTCQN G N
Sbjct: 275 GTNSAFYGC--GDTSGSCYQPGADTACCGCANWQDVLSSGSVPSSTLPCVNSNPVWAKTVQPTLQYIKAGCPNCYTYPYDDFSSTFTCQNTVNGFN 368
BLAST of mRNA_F-distichus_contig1014.110.1 vs. uniprot
Match: A0A078B3L6_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078B3L6_STYLE) HSP 1 Score: 89.4 bits (220), Expect = 1.230e-18 Identity = 52/127 (40.94%), Postives = 68/127 (53.54%), Query Frame = 1
Query: 1 GGWTA----GEFPD-NFPYYCGDS----FADGQRANMYGCHGGALTQSGYTPGADSTVCGCPDWENAGILAPAI---SECVGINPEWVDVAQPWAEHLKKACPTAYTFPYDDQTSTFTCQNLEGGVN 345
G WTA G P P+ C D ++ NMY C G S Y PGA + CGC +W+ G+ P+ +CV N W D + + +KKACPTAYT+PYDD +STFTCQ++ G VN
Sbjct: 257 GYWTADQVCGVIPSFGAPFNCQDRLPAPYSGFNNWNMYLCVG---IGSCYQPGASDSCCGCVNWDEEGVDVPSYPYTEKCVNKNSAWNDRMKNTLKWMKKACPTAYTYPYDDISSTFTCQHMNGSVN 380
BLAST of mRNA_F-distichus_contig1014.110.1 vs. uniprot
Match: A0A8K1C7Q3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Q3_PYTOL) HSP 1 Score: 85.9 bits (211), Expect = 1.340e-18 Identity = 36/78 (46.15%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 97 GGALTQSGYTPGADSTVCGCPDWENAGILA---PAISECVGINPEWVDVAQPWAEHLKKACPTAYTFPYDDQTSTFTC 321
G A+ + Y G D VCGC DW++ G+ P +C +NP+W++ P + LKKACPT YT+PYDD TSTF C
Sbjct: 93 GKAMREPTYVNGKDGEVCGCTDWQDRGVKVFNTPPTEKCKTVNPKWIEKIVPTLDFLKKACPTTYTYPYDDMTSTFVC 170
BLAST of mRNA_F-distichus_contig1014.110.1 vs. uniprot
Match: A0A8K1C856_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C856_PYTOL) HSP 1 Score: 87.8 bits (216), Expect = 4.750e-18 Identity = 43/105 (40.95%), Postives = 56/105 (53.33%), Query Frame = 1
Query: 31 NFPYYCGDSFADGQRANMYGCHG--GALTQSGYTP---GADSTVCGCPDWENAGILA---PAISECVGINPEWVDVAQPWAEHLKKACPTAYTFPYDDQTSTFTC 321
N + C +S D + HG G SGY P G D CGC DW++ G+ P +C +NP+W++ P + LKKACPT YT+PYDD TSTF C
Sbjct: 286 NKHFKCDESAGDATGLKIRDIHGCVGPQYLSGYQPASKGKDGEACGCTDWQDRGVKVFNTPPTEKCKAVNPKWIEKIVPTLDFLKKACPTTYTYPYDDMTSTFVC 390 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1014.110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig1014.110.1 >prot_F-distichus_contig1014.110.1 ID=prot_F-distichus_contig1014.110.1|Name=mRNA_F-distichus_contig1014.110.1|organism=Fucus distichus monoicous|type=polypeptide|length=115bp GGWTAGEFPDNFPYYCGDSFADGQRANMYGCHGGALTQSGYTPGADSTVCback to top mRNA from alignment at F-distichus_contig1014:224..568+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig1014.110.1 ID=mRNA_F-distichus_contig1014.110.1|Name=mRNA_F-distichus_contig1014.110.1|organism=Fucus distichus monoicous|type=mRNA|length=345bp|location=Sequence derived from alignment at F-distichus_contig1014:224..568+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig1014:224..568+ >mRNA_F-distichus_contig1014.110.1 ID=mRNA_F-distichus_contig1014.110.1|Name=mRNA_F-distichus_contig1014.110.1|organism=Fucus distichus monoicous|type=CDS|length=690bp|location=Sequence derived from alignment at F-distichus_contig1014:224..568+ (Fucus distichus monoicous)back to top |