mRNA_F-distichus_contig10137.108.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10137.108.1
Unique NamemRNA_F-distichus_contig10137.108.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10137.108.1 vs. uniprot
Match: D7FK80_ECTSI (Fructose-bisphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK80_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 4.820e-46
Identity = 75/89 (84.27%), Postives = 82/89 (92.13%), Query Frame = 1
Query:    1 MVSDVHRTLLYGGLFLYPADKKSTQGKLRVLYEGFPMALIVEEAGGVASTGMFNGSIRRVLDISPESIHERCPIIIGNEEFVDAVLKEY 267
            MVSDVHRTLLYGGLFLYPADKKST+GKLRVLYEGFPMALI+E+AGG ASTGMFNGSI RVL+I+P+ IHERCPIIIGN  FV+ VL EY
Sbjct:  155 MVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGSASTGMFNGSIGRVLEITPKDIHERCPIIIGNPPFVERVLDEY 243          
BLAST of mRNA_F-distichus_contig10137.108.1 vs. uniprot
Match: A0A836CP10_9STRA (Fructose-bisphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP10_9STRA)

HSP 1 Score: 151 bits (381), Expect = 6.850e-43
Identity = 70/90 (77.78%), Postives = 82/90 (91.11%), Query Frame = 1
Query:    1 MVSDVHRTLLYGGLFLYPADKKSTQGKLRVLYEGFPMALIVEEAGGVASTGMFNGSIRRVLDISPESIHERCPIIIGNEEFVDAVLKEYS 270
            MVSDVHRTLLYGG+FLYPADKKS  GKLRVLYEGFPMALI+E+AGG+ASTGMFNGSI+RVL+I P SIH++CPII+G    V++VLKEY+
Sbjct:  251 MVSDVHRTLLYGGIFLYPADKKSRGGKLRVLYEGFPMALIIEQAGGMASTGMFNGSIQRVLEIKPTSIHDKCPIILGTPSMVESVLKEYT 340          
BLAST of mRNA_F-distichus_contig10137.108.1 vs. uniprot
Match: A0A6U4JRS6_9STRA (Fructose-bisphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JRS6_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.730e-41
Identity = 70/91 (76.92%), Postives = 78/91 (85.71%), Query Frame = 1
Query:    1 MVSDVHRTLLYGGLFLYPADKKSTQGKLRVLYEGFPMALIVEEAGGVASTGMFNGSIRRVLDISPESIHERCPIIIGNEEFVDAVLKEYST 273
            MVSDVHRT+LYGG+FLYPAD+KS  GKLRVLYEGFPM L+V+EAGG ASTGMF GSIR V +I PESIHERCPII+GN EFVD VL  Y +
Sbjct:  256 MVSDVHRTILYGGVFLYPADRKSPNGKLRVLYEGFPMCLLVKEAGGKASTGMFMGSIRDVTEIDPESIHERCPIILGNTEFVDQVLAHYES 346          
BLAST of mRNA_F-distichus_contig10137.108.1 vs. uniprot
Match: A0A7S1A2B6_NOCSC (Fructose-bisphosphatase n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A2B6_NOCSC)

HSP 1 Score: 146 bits (369), Expect = 1.570e-40
Identity = 69/89 (77.53%), Postives = 79/89 (88.76%), Query Frame = 1
Query:    1 MVSDVHRTLLYGGLFLYPADKKSTQGKLRVLYEGFPMALIVEEAGGVASTGMFNGSIRRVLDISPESIHERCPIIIGNEEFVDAVLKEY 267
            MVSDVHRTLLYGG+FLYPADKKST+GKLRVLYEGFPMALI E+AGGVASTGMF G I R+L++ PE IH+RCPII+G+   V+AVLK Y
Sbjct:  315 MVSDVHRTLLYGGIFLYPADKKSTKGKLRVLYEGFPMALITEQAGGVASTGMFKGKIGRILEVMPEHIHDRCPIIMGSARDVEAVLKLY 403          
BLAST of mRNA_F-distichus_contig10137.108.1 vs. uniprot
Match: F0Y4K5_AURAN (Fructose-bisphosphatase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4K5_AURAN)

HSP 1 Score: 144 bits (362), Expect = 1.960e-40
Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 1
Query:    1 MVSDVHRTLLYGGLFLYPADKKSTQGKLRVLYEGFPMALIVEEAGGVASTGMFNGSIRRVLDISPESIHERCPIIIGNEEFVDAVLKEY 267
            MVSDVHRT+LYGG+FLYPAD KS +GKLRVLYEGFPMAL+VE AGGVASTGMFNGS++R+LD+ P SIHERCP+I+G    VD VL  Y
Sbjct:  214 MVSDVHRTILYGGIFLYPADVKSKKGKLRVLYEGFPMALLVERAGGVASTGMFNGSVQRMLDLVPTSIHERCPVILGAPRDVDLVLNRY 302          
BLAST of mRNA_F-distichus_contig10137.108.1 vs. uniprot
Match: A0A7S3MGQ2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGQ2_9STRA)

HSP 1 Score: 137 bits (346), Expect = 5.530e-40
Identity = 64/91 (70.33%), Postives = 76/91 (83.52%), Query Frame = 1
Query:    1 MVSDVHRTLLYGGLFLYPADKKSTQGKLRVLYEGFPMALIVEEAGGVASTGMFNGSIRRVLDISPESIHERCPIIIGNEEFVDAVLKEYST 273
            MVSDVHRTLLYGG+F+YPADKK+ +GKLRVLYEGFPMA+I E+AGGVASTGMF G I R+ D+ PE IH+RCPII+G E  V A+L  Y +
Sbjct:   46 MVSDVHRTLLYGGIFIYPADKKNAKGKLRVLYEGFPMAMITEQAGGVASTGMFLGKIGRIQDVVPEHIHDRCPIIMGGERDVKALLAMYES 136          
BLAST of mRNA_F-distichus_contig10137.108.1 vs. uniprot
Match: A0A7S4DRL4_9EUKA (Fructose-bisphosphatase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DRL4_9EUKA)

HSP 1 Score: 139 bits (349), Expect = 1.690e-39
Identity = 62/89 (69.66%), Postives = 76/89 (85.39%), Query Frame = 1
Query:    1 MVSDVHRTLLYGGLFLYPADKKSTQGKLRVLYEGFPMALIVEEAGGVASTGMFNGSIRRVLDISPESIHERCPIIIGNEEFVDAVLKEY 267
            MVSDVHRT+LYGG+F+YPADKKS  GKLR+LYEGFPMAL+VEEAGG+A+TG F G I+R+LD++P  IHERCP+I+G    V+ VLK Y
Sbjct:  111 MVSDVHRTMLYGGIFMYPADKKSKNGKLRILYEGFPMALLVEEAGGLATTGYFRGRIQRILDLTPVGIHERCPVILGCHRDVEPVLKRY 199          
BLAST of mRNA_F-distichus_contig10137.108.1 vs. uniprot
Match: A0A7R9YJ70_DIALT (Fructose-bisphosphatase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YJ70_DIALT)

HSP 1 Score: 142 bits (358), Expect = 3.790e-39
Identity = 65/91 (71.43%), Postives = 78/91 (85.71%), Query Frame = 1
Query:    1 MVSDVHRTLLYGGLFLYPADKKSTQGKLRVLYEGFPMALIVEEAGGVASTGMFNGSIRRVLDISPESIHERCPIIIGNEEFVDAVLKEYST 273
            MVSDVHRTLLYGG+F+YPADKKS  GKLRVLYEGFPMA+IVE AGGVASTG+FNG I R++D+ P+ +HERCP+I+G+E  V+ VL  Y T
Sbjct:  265 MVSDVHRTLLYGGVFIYPADKKSPGGKLRVLYEGFPMAMIVEAAGGVASTGLFNGKIHRMMDLEPKGVHERCPVILGSERDVNLVLGFYDT 355          
BLAST of mRNA_F-distichus_contig10137.108.1 vs. uniprot
Match: A0A7S3W818_9SPIT (Fructose-bisphosphatase n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W818_9SPIT)

HSP 1 Score: 141 bits (355), Expect = 1.330e-38
Identity = 65/89 (73.03%), Postives = 79/89 (88.76%), Query Frame = 1
Query:    1 MVSDVHRTLLYGGLFLYPADKKSTQGKLRVLYEGFPMALIVEEAGGVASTGMFNGSIRRVLDISPESIHERCPIIIGNEEFVDAVLKEY 267
            MVSDVHRTLLYGG+F+YPADKKS +GKLRVLYEGFPMALI E+AGG+ASTGM+ GS++RVL++ PESIH+RCPII+G    V+ VL+ Y
Sbjct:  297 MVSDVHRTLLYGGIFIYPADKKSVKGKLRVLYEGFPMALITEQAGGLASTGMYKGSVQRVLEVMPESIHDRCPIIMGAPRDVNKVLELY 385          
BLAST of mRNA_F-distichus_contig10137.108.1 vs. uniprot
Match: A0A7S4IKN0_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IKN0_9EUKA)

HSP 1 Score: 135 bits (339), Expect = 1.480e-38
Identity = 65/91 (71.43%), Postives = 74/91 (81.32%), Query Frame = 1
Query:    1 MVSDVHRTLLYGGLFLYPADKKSTQGKLRVLYEGFPMALIVEEAGGVASTGMFNGSIRRVLDISPESIHERCPIIIGNEEFVDAVLKEYST 273
            MVSDVHRT+LYGG F+YPADKKS  GKLRVLYEGFPMALIVE AGGVASTGMF G+I R+LD+ P  IHERCP+I+G    V+ VL  Y +
Sbjct:   72 MVSDVHRTILYGGCFVYPADKKSPGGKLRVLYEGFPMALIVEAAGGVASTGMFKGAIHRMLDLVPTDIHERCPVILGCPRDVNIVLGYYKS 162          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10137.108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK80_ECTSI4.820e-4684.27Fructose-bisphosphatase n=1 Tax=Ectocarpus silicul... [more]
A0A836CP10_9STRA6.850e-4377.78Fructose-bisphosphatase n=1 Tax=Tribonema minus Ta... [more]
A0A6U4JRS6_9STRA1.730e-4176.92Fructose-bisphosphatase n=1 Tax=Phaeomonas parva T... [more]
A0A7S1A2B6_NOCSC1.570e-4077.53Fructose-bisphosphatase n=1 Tax=Noctiluca scintill... [more]
F0Y4K5_AURAN1.960e-4075.28Fructose-bisphosphatase n=1 Tax=Aureococcus anopha... [more]
A0A7S3MGQ2_9STRA5.530e-4070.33Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S4DRL4_9EUKA1.690e-3969.66Fructose-bisphosphatase n=1 Tax=Lotharella globosa... [more]
A0A7R9YJ70_DIALT3.790e-3971.43Fructose-bisphosphatase n=2 Tax=Diacronema lutheri... [more]
A0A7S3W818_9SPIT1.330e-3873.03Fructose-bisphosphatase n=1 Tax=Strombidinopsis ac... [more]
A0A7S4IKN0_9EUKA1.480e-3871.43Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10137contigF-distichus_contig10137:10627..11169 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score157.5
Seed ortholog evalue2.9e-36
Seed eggNOG ortholog2880.D7FK80
KEGG rclassRC00017
KEGG koko:K03841
KEGG ReactionR00762,R04780
KEGG Pathwayko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko04152,ko04910,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map04152,map04910
KEGG ModuleM00003,M00165,M00167,M00344
Hectar predicted targeting categoryother localisation
EggNOG free text desc.fructose 1,6-bisphosphate 1-phosphatase activity
EggNOG OGsCOG0158@1,KOG1458@2759
Ec32 ortholog descriptioncytosolic fructose-1,6-bisphosphatase
Ec32 orthologEc-17_003090.1
EC3.1.3.11
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons2
Model size276
Cds size276
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928929.8198519-CDS-F-distichus_contig10137:10626..108261622928929.8198519-CDS-F-distichus_contig10137:10626..10826Fucus distichus monoicousCDSF-distichus_contig10137 10627..10826 -
1690885070.8936522-CDS-F-distichus_contig10137:10626..108261690885070.8936522-CDS-F-distichus_contig10137:10626..10826Fucus distichus monoicousCDSF-distichus_contig10137 10627..10826 -
1622928929.8341208-CDS-F-distichus_contig10137:11093..111691622928929.8341208-CDS-F-distichus_contig10137:11093..11169Fucus distichus monoicousCDSF-distichus_contig10137 11094..11169 -
1690885070.9060771-CDS-F-distichus_contig10137:11093..111691690885070.9060771-CDS-F-distichus_contig10137:11093..11169Fucus distichus monoicousCDSF-distichus_contig10137 11094..11169 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10137.108.1prot_F-distichus_contig10137.108.1Fucus distichus monoicouspolypeptideF-distichus_contig10137 10627..11169 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10137.108.1

>prot_F-distichus_contig10137.108.1 ID=prot_F-distichus_contig10137.108.1|Name=mRNA_F-distichus_contig10137.108.1|organism=Fucus distichus monoicous|type=polypeptide|length=92bp
MVSDVHRTLLYGGLFLYPADKKSTQGKLRVLYEGFPMALIVEEAGGVAST
GMFNGSIRRVLDISPESIHERCPIIIGNEEFVDAVLKEYST*
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mRNA from alignment at F-distichus_contig10137:10627..11169-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10137.108.1 ID=mRNA_F-distichus_contig10137.108.1|Name=mRNA_F-distichus_contig10137.108.1|organism=Fucus distichus monoicous|type=mRNA|length=543bp|location=Sequence derived from alignment at F-distichus_contig10137:10627..11169- (Fucus distichus monoicous)
ATGGTCTCCGACGTCCACCGCACGCTGCTTTACGGGGGACTTTTCCTCTA CCCCGCCGACAAGAAATCAACTCAGGGTGAGTTGAGAGTTTTTGGGGGGG AGGGAGGGGGTGGGGGAAATGTTTTTGGTTGTACAATAATCAACCTTTTT AAAAACGCCTACTCGGGGTTTCCACTGAACATATGTACTGGATTCCCTAC GTTGCAAAACTTGAGACGGGAAGTTGACGCAACTCGGTAGAGCGAGCACG TTGTTTGTCTCAATGAAGGCGTTACGTTAGTCTACATGCCCGAGTCACGC CTCCTCGTTAAACCATGAAACCCCTTGTCTTTTTTTCGCCAAGGCAAACT GCGAGTGCTGTACGAGGGCTTCCCGATGGCGCTCATCGTGGAAGAGGCGG GAGGGGTGGCCTCCACCGGCATGTTCAACGGGTCGATCCGCCGTGTCCTG GACATTTCTCCCGAGAGCATCCACGAGCGCTGCCCAATTATAATCGGAAA CGAGGAATTCGTTGATGCCGTGTTGAAGGAATACAGCACCTAG
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Coding sequence (CDS) from alignment at F-distichus_contig10137:10627..11169-

>mRNA_F-distichus_contig10137.108.1 ID=mRNA_F-distichus_contig10137.108.1|Name=mRNA_F-distichus_contig10137.108.1|organism=Fucus distichus monoicous|type=CDS|length=552bp|location=Sequence derived from alignment at F-distichus_contig10137:10627..11169- (Fucus distichus monoicous)
ATGGTCTCCGACGTCCACCGCACGCTGCTTTACGGGGGACTTTTCCTCTA
CCCCGCCGACAAGAAATCAACTCAGGATGGTCTCCGACGTCCACCGCACG
CTGCTTTACGGGGGACTTTTCCTCTACCCCGCCGACAAGAAATCAACTCA
GGGCAAACTGCGAGTGCTGTACGAGGGCTTCCCGATGGCGCTCATCGTGG
AAGAGGCGGGAGGGGTGGCCTCCACCGGCATGTTCAACGGGTCGATCCGC
CGTGTCCTGGACATTTCTCCCGAGAGCATCCACGAGCGCTGCCCAATTAT
AATCGGAAACGAGGAATTCGTTGATGCCGTGTTGAAGGAATACAGCACCT
AGGCAAACTGCGAGTGCTGTACGAGGGCTTCCCGATGGCGCTCATCGTGG
AAGAGGCGGGAGGGGTGGCCTCCACCGGCATGTTCAACGGGTCGATCCGC
CGTGTCCTGGACATTTCTCCCGAGAGCATCCACGAGCGCTGCCCAATTAT
AATCGGAAACGAGGAATTCGTTGATGCCGTGTTGAAGGAATACAGCACCT
AG
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