mRNA_F-distichus_contig101268.98.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig101268.98.1 vs. uniprot
Match: D7FL84_ECTSI (Similar to aldehyde oxidase 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL84_ECTSI) HSP 1 Score: 125 bits (313), Expect = 1.300e-35 Identity = 56/73 (76.71%), Postives = 66/73 (90.41%), Query Frame = 1
Query: 1 DHLVFFVNGAKHVVRDVQPQTTLLQYLRRVGLTGTKLGCGEGGCGACTVMVSAFDYVQREIRHTSVNACLAPL 219
+HLVFFVNGAK VV+D QPQTTLLQ+LR GLTGTKLGCGEGGCGACTVMVS+FD +++I+H +VNACLAP+
Sbjct: 17 NHLVFFVNGAKQVVKDAQPQTTLLQHLRAAGLTGTKLGCGEGGCGACTVMVSSFDSDKKQIKHAAVNACLAPV 89
BLAST of mRNA_F-distichus_contig101268.98.1 vs. uniprot
Match: A0A6H5JRC2_9PHAE (Xanthine dehydrogenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC2_9PHAE) HSP 1 Score: 129 bits (325), Expect = 3.620e-33 Identity = 58/75 (77.33%), Postives = 68/75 (90.67%), Query Frame = 1
Query: 1 DHLVFFVNGAKHVVRDVQPQTTLLQYLRRVGLTGTKLGCGEGGCGACTVMVSAFDYVQREIRHTSVNACLAPLVS 225
DHL+FFVNGAK VV+D QPQTTLLQ+LR VGLTGTKLGCGEGGCGACTVMVS+FD +++I+H +VNACLAP+ S
Sbjct: 19 DHLIFFVNGAKQVVKDAQPQTTLLQHLRAVGLTGTKLGCGEGGCGACTVMVSSFDAEKKQIKHAAVNACLAPVCS 93
BLAST of mRNA_F-distichus_contig101268.98.1 vs. uniprot
Match: D7G4V3_ECTSI (Xanthine dehydrogenase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4V3_ECTSI) HSP 1 Score: 129 bits (324), Expect = 5.030e-33 Identity = 59/75 (78.67%), Postives = 67/75 (89.33%), Query Frame = 1
Query: 1 DHLVFFVNGAKHVVRDVQPQTTLLQYLRRVGLTGTKLGCGEGGCGACTVMVSAFDYVQREIRHTSVNACLAPLVS 225
DHLVFFVNGAK VV+D QPQTTLLQ+LR VGLTGTKLGCGEGGCGACTVMVS+FD +++I H +VNACLAP+ S
Sbjct: 19 DHLVFFVNGAKQVVKDAQPQTTLLQHLRAVGLTGTKLGCGEGGCGACTVMVSSFDSEKKQITHAAVNACLAPMCS 93
BLAST of mRNA_F-distichus_contig101268.98.1 vs. uniprot
Match: A0A836C8N1_9STRA (Xanthine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N1_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.620e-29 Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = 1
Query: 1 DHLVFFVNGAKHVVRDVQPQTTLLQYLRRVGLTGTKLGCGEGGCGACTVMVSAFDYVQREIRHTSVNACLAPLVS 225
DHLVFFVNG + VV+D QP+ TLL +LR GLTGTKLGCGEGGCGACTVMVS++D+ + IRH +VNACLAP+ S
Sbjct: 7 DHLVFFVNGKRQVVKDAQPEVTLLSWLRASGLTGTKLGCGEGGCGACTVMVSSYDHGAKTIRHAAVNACLAPICS 81
BLAST of mRNA_F-distichus_contig101268.98.1 vs. uniprot
Match: A0A8B7TCL7_HIPAR (xanthine dehydrogenase/oxidase-like n=1 Tax=Hipposideros armiger TaxID=186990 RepID=A0A8B7TCL7_HIPAR) HSP 1 Score: 108 bits (269), Expect = 1.510e-28 Identity = 53/82 (64.63%), Postives = 63/82 (76.83%), Query Frame = 1
Query: 1 DHLVFFVNGAKHVVRDVQPQTTLLQYLRR-VGLTGTKLGCGEGGCGACTVMVSAFDYVQREIRHTSVNACLAPLVSQSRYAV 243
D LVFFVNG K V ++ P+TTLL YLRR +GL+GTKLGCG GGCGACTVMVS +D++Q +I H SVNACL P+ S AV
Sbjct: 4 DKLVFFVNGRKVVEKNADPETTLLAYLRRSLGLSGTKLGCGVGGCGACTVMVSKYDHLQNKIVHFSVNACLTPICSLHHVAV 85
BLAST of mRNA_F-distichus_contig101268.98.1 vs. uniprot
Match: A0A8B7S8X3_HIPAR (xanthine dehydrogenase/oxidase-like n=1 Tax=Hipposideros armiger TaxID=186990 RepID=A0A8B7S8X3_HIPAR) HSP 1 Score: 109 bits (273), Expect = 2.730e-28 Identity = 54/82 (65.85%), Postives = 63/82 (76.83%), Query Frame = 1
Query: 1 DHLVFFVNGAKHVVRDVQPQTTLLQYLRR-VGLTGTKLGCGEGGCGACTVMVSAFDYVQREIRHTSVNACLAPLVSQSRYAV 243
D LVFFVNG K V ++ P+TTLL YLRR +GL+GTKLGCGEGGCGACTVMVS +D +Q +I H SVNACL P+ S AV
Sbjct: 4 DELVFFVNGRKVVEKNADPETTLLAYLRRSLGLSGTKLGCGEGGCGACTVMVSKYDRLQNKIIHFSVNACLTPICSLHHVAV 85
BLAST of mRNA_F-distichus_contig101268.98.1 vs. uniprot
Match: A0A0E9WUG7_ANGAN (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Anguilla anguilla TaxID=7936 RepID=A0A0E9WUG7_ANGAN) HSP 1 Score: 107 bits (266), Expect = 3.440e-28 Identity = 55/82 (67.07%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 1 DHLVFFVNGAKHVVRDVQPQTTLLQYLRR-VGLTGTKLGCGEGGCGACTVMVSAFDYVQREIRHTSVNACLAPLVSQSRYAV 243
D LVFFVNG K V R+ +P+ TLL YLRR +GLTGTKLGC EGGCGACTVMVS F Q I H SVNACLAP+ S AV
Sbjct: 10 DELVFFVNGKKIVERNAEPEMTLLTYLRRTLGLTGTKLGCAEGGCGACTVMVSKFHRCQNRIVHHSVNACLAPICSLHHCAV 91
BLAST of mRNA_F-distichus_contig101268.98.1 vs. uniprot
Match: A0A6P4V651_PANPR (xanthine dehydrogenase/oxidase-like isoform X3 n=2 Tax=Panthera pardus TaxID=9691 RepID=A0A6P4V651_PANPR) HSP 1 Score: 109 bits (273), Expect = 3.850e-28 Identity = 54/82 (65.85%), Postives = 63/82 (76.83%), Query Frame = 1
Query: 1 DHLVFFVNGAKHVVRDVQPQTTLLQYLRR-VGLTGTKLGCGEGGCGACTVMVSAFDYVQREIRHTSVNACLAPLVSQSRYAV 243
D LVFFVNG K V ++ P+TTLL YLRR +GL+GTKLGCGEGGCGACTVM+S +D Q +I H SVNACLAP+ S AV
Sbjct: 4 DELVFFVNGKKVVEKNADPETTLLSYLRRKLGLSGTKLGCGEGGCGACTVMLSKYDRFQNKIIHFSVNACLAPICSLHHVAV 85
BLAST of mRNA_F-distichus_contig101268.98.1 vs. uniprot
Match: Q3TP30_MOUSE (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Mus musculus TaxID=10090 RepID=Q3TP30_MOUSE) HSP 1 Score: 108 bits (269), Expect = 9.190e-28 Identity = 53/82 (64.63%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 1 DHLVFFVNGAKHVVRDVQPQTTLLQYLRR-VGLTGTKLGCGEGGCGACTVMVSAFDYVQREIRHTSVNACLAPLVSQSRYAV 243
D LVFFVNG K V ++ P+TTLL YLRR +GL GTKLGCGEGGCGACTVM+S +D +Q +I H SVNACL P+ S AV
Sbjct: 7 DELVFFVNGKKVVEKNADPETTLLVYLRRKLGLCGTKLGCGEGGCGACTVMISKYDRLQNKIVHFSVNACLTPICSLHHVAV 88
BLAST of mRNA_F-distichus_contig101268.98.1 vs. uniprot
Match: UPI000529F83E (xanthine dehydrogenase/oxidase-like n=1 Tax=Colius striatus TaxID=57412 RepID=UPI000529F83E) HSP 1 Score: 107 bits (266), Expect = 2.180e-27 Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 1 DHLVFFVNGAKHVVRDVQPQTTLLQYLRR-VGLTGTKLGCGEGGCGACTVMVSAFDYVQREIRHTSVNACLAPLVSQSRYAV 243
D LVFFVNG K V +DV P+TTLL YLRR +GL GTKLGCGEGGCGACTVM+S +D +++I H + NACL P+ S AV
Sbjct: 8 DELVFFVNGKKVVEKDVDPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMISKYDPFRKKILHHTANACLFPICSLHHVAV 89 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101268.98.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig101268.98.1 >prot_F-distichus_contig101268.98.1 ID=prot_F-distichus_contig101268.98.1|Name=mRNA_F-distichus_contig101268.98.1|organism=Fucus distichus monoicous|type=polypeptide|length=81bp DHLVFFVNGAKHVVRDVQPQTTLLQYLRRVGLTGTKLGCGEGGCGACTVMback to top mRNA from alignment at F-distichus_contig101268:718..960- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig101268.98.1 ID=mRNA_F-distichus_contig101268.98.1|Name=mRNA_F-distichus_contig101268.98.1|organism=Fucus distichus monoicous|type=mRNA|length=243bp|location=Sequence derived from alignment at F-distichus_contig101268:718..960- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig101268:718..960- >mRNA_F-distichus_contig101268.98.1 ID=mRNA_F-distichus_contig101268.98.1|Name=mRNA_F-distichus_contig101268.98.1|organism=Fucus distichus monoicous|type=CDS|length=486bp|location=Sequence derived from alignment at F-distichus_contig101268:718..960- (Fucus distichus monoicous)back to top |